AT1G64890

Folate-Biopterin Transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0011273
Physical Location & Seq
Forward (+)
24109538 .. 24111489
1952 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G64890.1

Sequence Viewer

Length: 1329 bp
ATGAGCAGCAGCAGCGATACTCATGCCGGAGAATCTCGTCATCGCCGTAACCCGATCCGGTGGCTACTCGGTTTCGGTTTCTTCGTACAAGGATTCAGAGGATTCCCATGGCTTGGAGCCAATTTCTTCCTCACAGAACAGCTCCGTGTTAATCCTTCAGTGCTTCAGCTTCTTCAAAACTCAGCCAATCTTCCAATGGTCGCTAAACCCATCTACGGCGTCGTTTCAGACTCTGTCTACTTCTTTGGCCAACATCGAATCCCATACATCGCCGTTGGAGCTTTGTTACAAGCAATCTCATGGCTAGCTATAGCATTCTTGTCAAGATCCAATGTATCAATCTTAGCTTTATCGATATATCTTCTCCTTAGTAATCTCGGTGCTTCCTTAGTAGAAGTAGCGAATGATGCTATTGTTGCTGAATCCGGAAAGCAAAAAACCTCAGAGACGCAATCCGGTGAGCTACCGTCATTTGTTTGGATGGTTTCTTCTCTTGGTGGAATCTTAGGTAACCTTTTAGGTGGTATTGCTATCAAAACGTTTTCAGCTCAGTCAACGTTTCTTGTGTTTGGGATCTTGGCTCTTCTTCAGTTCTTGGTAACTATAAACATCAGAGAAAAGTCTCTTAATCTTCCGGAAAATCCATCACCAGCTGGTGGTATTAGGAAACATCTCTCTGATCTTTCGCATGTGTTGAGGAAGCCCGAGATTTCTTATTCGATAGCTTGGATCGCGGTATCAACCGCTGTGGTTCCGGTTTTGACAGGGACTATGTTTTTTTACCAAACAAAGTTTCTGAAGATTGATGCATCACTTTTAGGGATCTCCAAGGTGTTTGGTCAAATTGCAATGCTTCTTTGGGGTTTTGCATATAATCGTTGGCTAAAAGCTATGCGGCCGAGGAAACTGCTGACAGCCATTCAGGTGACGATAGCTTTCTTTGTGATATCCGATCTCTTGTTTGTGAAAGGCGTGTACCGGGATTTGGGAGTGTCGGACTCTGTATATGTACTCTTCTTTTCTGGATTCTTGGAAACTCTATTTTACTTCAAGATTCTGCCGTTTACTGTCTTGATGGCTCGTCTCTGTCCTCCTGGATGTGAAGGGTCTCTCATGGCATTTGTCATGTCAGCCATTGCTCTTGCATTCATAGTTAGCGGATATCTTGGAATCGTTCTTGCATCGTTTGTCGGTGTAACAGAGGATGATTTCTCGGGGTTTACTCGCGGACTCGCTATAGAAGCGTGCTGCGTTGGGATTCCGTTGATCTTAACTTCTTGGATATATGATGAAGCGGAAACAAAAGAGAAGAGTAAAAAGATAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BT1

Protein Analysis

442

Amino Acids

48.49

Weight (kDa)

9.14

Isoelectric Point (pI)

39.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 27 - 386 6.9e-17 Major Facilitator Superfamily
BT1 PF03092 30 - 435 1.8e-142 BT1 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64890
fragaria_vesca FvH4_7g34292
malus_domestica MD07G1311100.v1.1
prunus_persica Prupe.2G330100_v2.0.a1
pyrus_communis pycom07g28340
rosa_chinensis RchiOBHm_Chr1g0384681
rosa_laevigata RLG00000026016
rosa_multiflora Rmu_sc0012136.1_g000022
rosa_roxburghii Rroxscaffold_4G00276470 Rroxscaffold_7G00218000
rosa_rugosa Rorug01G0450700 Rorug01G0450700 Rorug01G0450800
rosa_samantha Rh1AG475200 Rh1BG433400 Rh1CG446800 Rh1CG446900 Rh1DG465900 Rh6BG010000
rosa_wichuraiana Rw1G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 113, 656
AccI GTMKAC 1 cut(s) 237
AccII CGCG 2 cut(s) 734, 1227
AccIII TCCGGA 2 cut(s) 425, 634
AciI CCGC 6 cut(s) 734, 744, 895, 1158, 1227, 1295
AclI AACGTT 2 cut(s) 539, 557
AclWI GGATC 5 cut(s) 49, 321, 581, 737, 830
AcoI YGGCCR 2 cut(s) 247, 896
AcuI CTGAAG 4 cut(s) 141, 149, 572, 818
AcyI GRCGYC 1 cut(s) 219
AfaI GTAC 3 cut(s) 87, 977, 1011
AfiI CCNNNNNNNGG 4 cut(s) 113, 215, 656, 985
AgsI TTSAA 2 cut(s) 176, 1051
AjnI CCWGG 1 cut(s) 1093
AjuI GAANNNNNNNTTGG 2 cut(s) 777, 809
Alw26I GTCTC 4 cut(s) 440, 627, 1088, 1113
AlwI GGATC 5 cut(s) 49, 321, 581, 737, 830
AlwNI CAGNNNCTG 1 cut(s) 233
Ama87I CYCGRG 2 cut(s) 704, 1213
Aor13HI TCCGGA 2 cut(s) 425, 634
AoxI GGCC 2 cut(s) 247, 896
ApeKI GCWGC 4 cut(s) 6, 9, 12, 1248
AsuC2I CCSGG 1 cut(s) 980
AsuHPI GGTGA 3 cut(s) 470, 639, 937
AsuNHI GCTAGC 1 cut(s) 304
AvaI CYCGRG 2 cut(s) 704, 1213
BalI TGGCCA 1 cut(s) 249
BbvI GCAGC 4 cut(s) 18, 21, 24, 1235
BccI CCATC 4 cut(s) 218, 475, 652, 1069
BceAI ACGGC 4 cut(s) 30, 232, 257, 1045
BcgI CGANNNNNNTGC 4 cut(s) 5, 39, 889, 923
BciT130I CCWGG 1 cut(s) 1095
BcnI CCSGG 1 cut(s) 980
BcoDI GTCTC 4 cut(s) 440, 627, 1088, 1113
BfaI CTAG 1 cut(s) 305
BfmI CTRYAG 2 cut(s) 309, 1236
BisI GCNGC 5 cut(s) 7, 10, 13, 896, 1249
BlsI GCNGC 5 cut(s) 8, 11, 14, 897, 1250
Bme1390I CCNGG 2 cut(s) 980, 1095
BmeT110I CYCGRG 2 cut(s) 704, 1213
BmiI GGNNCC 2 cut(s) 118, 753
BmrFI CCNGG 2 cut(s) 980, 1095
BmsI GCATC 4 cut(s) 397, 796, 818, 1190
BmtI GCTAGC 1 cut(s) 308
BpuMI CCSGG 1 cut(s) 980
Bsa29I ATCGAT 1 cut(s) 353
BsaHI GRCGYC 1 cut(s) 219
BsaI GGTCTC 1 cut(s) 1113
BsaJI CCNNGG 3 cut(s) 107, 828, 899
BsaWI WCCGGW 5 cut(s) 57, 425, 455, 634, 754
Bsc4I CCNNNNNNNGG 4 cut(s) 113, 215, 656, 985
Bse3DI GCAATG 2 cut(s) 855, 1134
BseAI TCCGGA 2 cut(s) 425, 634
BseBI CCWGG 1 cut(s) 1095
BseCI ATCGAT 1 cut(s) 353
BseDI CCNNGG 3 cut(s) 107, 828, 899
BseGI GGATG 3 cut(s) 486, 1103, 1210
BseLI CCNNNNNNNGG 4 cut(s) 113, 215, 656, 985
BseMI GCAATG 2 cut(s) 855, 1134
BseMII CTCAG 3 cut(s) 195, 456, 563
BseX3I CGGCCG 1 cut(s) 896
BseXI GCAGC 4 cut(s) 18, 21, 24, 1235
Bsh1236I CGCG 2 cut(s) 734, 1227
Bsh1285I CGRYCG 1 cut(s) 899
BshFI GGCC 2 cut(s) 249, 898
BshVI ATCGAT 1 cut(s) 353
BsiEI CGRYCG 1 cut(s) 899
BsiHKCI CYCGRG 2 cut(s) 704, 1213
BsiSI CCGG 7 cut(s) 27, 58, 426, 456, 635, 755, 979
BslFI GGGAC 1 cut(s) 781
BslI CCNNNNNNNGG 4 cut(s) 113, 215, 656, 985
BsmAI GTCTC 4 cut(s) 440, 627, 1088, 1113
BsmBI CGTCTC 2 cut(s) 440, 1088
BsmFI GGGAC 1 cut(s) 781
BsmI GAATGC 2 cut(s) 314, 1145
BsnI GGCC 2 cut(s) 249, 898
Bso31I GGTCTC 1 cut(s) 1113
BsoBI CYCGRG 2 cut(s) 704, 1213
Bsp13I TCCGGA 2 cut(s) 425, 634
Bsp143I GATC 8 cut(s) 54, 326, 573, 679, 729, 822, 952, 1266
Bsp19I CCATGG 1 cut(s) 107
BspACI CCGC 6 cut(s) 734, 744, 895, 1158, 1227, 1295
BspANI GGCC 2 cut(s) 249, 898
BspCNI CTCAG 3 cut(s) 194, 455, 562
BspDI ATCGAT 1 cut(s) 353
BspEI TCCGGA 2 cut(s) 425, 634
BspFNI CGCG 2 cut(s) 734, 1227
BspLI GGNNCC 2 cut(s) 118, 753
BspOI GCTAGC 1 cut(s) 308
BspPI GGATC 5 cut(s) 49, 321, 581, 737, 830
BspQI GCTCTTC 1 cut(s) 588
BspTNI GGTCTC 1 cut(s) 1113
BsrDI GCAATG 2 cut(s) 855, 1134
BssECI CCNNGG 3 cut(s) 107, 828, 899
BssMI GATC 8 cut(s) 54, 326, 573, 679, 729, 822, 952, 1266
BssNI GRCGYC 1 cut(s) 219
BssT1I CCWWGG 2 cut(s) 107, 828
Bst2UI CCWGG 1 cut(s) 1095
Bst4CI ACNGT 2 cut(s) 468, 1069
Bst6I CTCTTC 3 cut(s) 588, 1019, 1304
BstACI GRCGYC 1 cut(s) 219
BstC8I GCNNGC 2 cut(s) 306, 1246
BstDEI CTNAG 7 cut(s) 181, 343, 368, 388, 442, 505, 549
BstDSI CCRYGG 1 cut(s) 107
BstEII GGTNACC 1 cut(s) 509
BstF5I GGATG 3 cut(s) 486, 1103, 1210
BstFNI CGCG 2 cut(s) 734, 1227
BstKTI GATC 8 cut(s) 57, 329, 576, 682, 732, 825, 955, 1269
BstMAI GTCTC 4 cut(s) 440, 627, 1088, 1113
BstMBI GATC 8 cut(s) 54, 326, 573, 679, 729, 822, 952, 1266
BstMCI CGRYCG 1 cut(s) 899
BstMWI GCNNNNNNNGC 6 cut(s) 12, 278, 407, 416, 731, 1241
BstNI CCWGG 1 cut(s) 1095
BstNSI RCATGY 1 cut(s) 692
BstPI GGTNACC 1 cut(s) 509
BstSCI CCNGG 2 cut(s) 978, 1093
BstSFI CTRYAG 2 cut(s) 309, 1236
BstUI CGCG 2 cut(s) 734, 1227
BstV1I GCAGC 4 cut(s) 18, 21, 24, 1235
BstX2I RGATCY 3 cut(s) 326, 573, 822
BstYI RGATCY 3 cut(s) 326, 573, 822
BstZI CGGCCG 1 cut(s) 896
Bsu15I ATCGAT 1 cut(s) 353
BsuRI GGCC 2 cut(s) 249, 898
BsuTUI ATCGAT 1 cut(s) 353
BtgI CCRYGG 1 cut(s) 107
BtgZI GCGATG 2 cut(s) 26, 253
BtsCI GGATG 3 cut(s) 486, 1103, 1210
BtsIMutI CAGTG 1 cut(s) 165
Cac8I GCNNGC 2 cut(s) 306, 1246
CaiI CAGNNNCTG 1 cut(s) 233
ClaI ATCGAT 1 cut(s) 353
CseI GACGC 2 cut(s) 208, 457
Csp6I GTAC 3 cut(s) 86, 976, 1010
CspCI CAANNNNNGTGG 2 cut(s) 729, 764
CviAII CATG 6 cut(s) 23, 108, 300, 689, 1114, 1126
CviQI GTAC 3 cut(s) 86, 976, 1010
DdeI CTNAG 7 cut(s) 181, 343, 368, 388, 442, 505, 549
DpnI GATC 8 cut(s) 56, 328, 575, 681, 731, 824, 954, 1268
DpnII GATC 8 cut(s) 54, 326, 573, 679, 729, 822, 952, 1266
EaeI YGGCCR 2 cut(s) 247, 896
EagI CGGCCG 1 cut(s) 896
Eam1104I CTCTTC 3 cut(s) 588, 1019, 1304
EarI CTCTTC 3 cut(s) 588, 1019, 1304
EclXI CGGCCG 1 cut(s) 896
Eco130I CCWWGG 2 cut(s) 107, 828
Eco31I GGTCTC 1 cut(s) 1113
Eco32I GATATC 2 cut(s) 948, 1163
Eco52I CGGCCG 1 cut(s) 896
Eco57I CTGAAG 4 cut(s) 141, 149, 572, 818
Eco88I CYCGRG 2 cut(s) 704, 1213
Eco91I GGTNACC 1 cut(s) 509
EcoO65I GGTNACC 1 cut(s) 509
EcoRII CCWGG 1 cut(s) 1093
EcoRV GATATC 2 cut(s) 948, 1163
EcoT14I CCWWGG 2 cut(s) 107, 828
EcoT22I ATGCAT 1 cut(s) 811
ErhI CCWWGG 2 cut(s) 107, 828
Esp3I CGTCTC 2 cut(s) 440, 1088
FaeI CATG 6 cut(s) 26, 111, 303, 692, 1117, 1129
FaqI GGGAC 1 cut(s) 781
FatI CATG 6 cut(s) 22, 107, 299, 688, 1113, 1125
FblI GTMKAC 1 cut(s) 237
Fnu4HI GCNGC 5 cut(s) 7, 10, 13, 896, 1249
FokI GGATG 3 cut(s) 493, 1110, 1217
Fsp4HI GCNGC 5 cut(s) 7, 10, 13, 896, 1249
FspBI CTAG 1 cut(s) 305
GluI GCNGC 5 cut(s) 7, 10, 13, 896, 1249
HaeIII GGCC 2 cut(s) 249, 898
HapII CCGG 7 cut(s) 27, 58, 426, 456, 635, 755, 979
HgaI GACGC 2 cut(s) 208, 457
Hin1I GRCGYC 1 cut(s) 219
Hin1II CATG 6 cut(s) 26, 111, 303, 692, 1117, 1129
HincII GTYRAC 1 cut(s) 555
HindII GTYRAC 1 cut(s) 555
HpaII CCGG 7 cut(s) 27, 58, 426, 456, 635, 755, 979
HphI GGTGA 3 cut(s) 470, 639, 937
Hpy166II GTNNAC 5 cut(s) 238, 555, 976, 1065, 1221
Hpy188I TCNGA 8 cut(s) 98, 229, 445, 614, 679, 798, 952, 997
Hpy188III TCNNGA 6 cut(s) 324, 426, 635, 1023, 1051, 1072
Hpy8I GTNNAC 5 cut(s) 238, 555, 976, 1065, 1221
Hpy99I CGWCG 1 cut(s) 224
HpyAV CCTTC 2 cut(s) 165, 1097
HpyCH4III ACNGT 2 cut(s) 468, 1069
HpyCH4IV ACGT 2 cut(s) 539, 557
HpyCH4V TGCA 5 cut(s) 809, 848, 869, 1145, 1181
HpyF10VI GCNNNNNNNGC 6 cut(s) 12, 278, 407, 416, 731, 1241
HpyF3I CTNAG 7 cut(s) 181, 343, 368, 388, 442, 505, 549
HpySE526I ACGT 2 cut(s) 539, 557
Hsp92I GRCGYC 1 cut(s) 219
Hsp92II CATG 6 cut(s) 26, 111, 303, 692, 1117, 1129
Kpn2I TCCGGA 2 cut(s) 425, 634
Kzo9I GATC 8 cut(s) 54, 326, 573, 679, 729, 822, 952, 1266
LguI GCTCTTC 1 cut(s) 588
LmnI GCTCC 3 cut(s) 116, 147, 278
Lsp1109I GCAGC 4 cut(s) 18, 21, 24, 1235
LweI GCATC 4 cut(s) 397, 796, 818, 1190
MaeI CTAG 1 cut(s) 305
MaeII ACGT 2 cut(s) 539, 557
MaeIII GTNAC 6 cut(s) 47, 285, 509, 598, 925, 1195
MalI GATC 8 cut(s) 56, 328, 575, 681, 731, 824, 954, 1268
MboI GATC 8 cut(s) 54, 326, 573, 679, 729, 822, 952, 1266
MflI RGATCY 3 cut(s) 326, 573, 822
MlsI TGGCCA 1 cut(s) 249
MluCI AATT 2 cut(s) 121, 843
MluNI TGGCCA 1 cut(s) 249
MlyI GAGTC 3 cut(s) 224, 992, 1224
MmeI TCCRAC 2 cut(s) 256, 975
MnlI CCTC 7 cut(s) 92, 140, 451, 690, 894, 1101, 1195
Mox20I TGGCCA 1 cut(s) 249
Mph1103I ATGCAT 1 cut(s) 811
MroI TCCGGA 2 cut(s) 425, 634
MscI TGGCCA 1 cut(s) 249
MseI TTAA 3 cut(s) 150, 627, 1271
MslI CAYNNNNRTG 1 cut(s) 923
Msp20I TGGCCA 1 cut(s) 249
MspA1I CMGCKG 2 cut(s) 653, 746
MspI CCGG 7 cut(s) 27, 58, 426, 456, 635, 755, 979
MspR9I CCNGG 2 cut(s) 980, 1095
Mva1269I GAATGC 2 cut(s) 314, 1145
MvaI CCWGG 1 cut(s) 1095
MvnI CGCG 2 cut(s) 734, 1227
MwoI GCNNNNNNNGC 6 cut(s) 12, 278, 407, 416, 731, 1241
NciI CCSGG 1 cut(s) 980
NcoI CCATGG 1 cut(s) 107
NdeII GATC 8 cut(s) 54, 326, 573, 679, 729, 822, 952, 1266
NheI GCTAGC 1 cut(s) 304
NlaIII CATG 6 cut(s) 26, 111, 303, 692, 1117, 1129
NlaIV GGNNCC 2 cut(s) 118, 753
NmeAIII GCCGAG 1 cut(s) 924
NmuCI GTSAC 1 cut(s) 925
NsiI ATGCAT 1 cut(s) 811
NspI RCATGY 1 cut(s) 692
PciSI GCTCTTC 1 cut(s) 588
PcsI WCGNNNNNNNCGW 2 cut(s) 43, 81
PctI GAATGC 2 cut(s) 314, 1145
PflFI GACNNNGTC 1 cut(s) 233
PflMI CCANNNNNTGG 2 cut(s) 113, 656
PfoI TCCNGGA 1 cut(s) 1093
PkrI GCNGC 5 cut(s) 8, 11, 14, 897, 1250
PleI GAGTC 3 cut(s) 224, 992, 1224
PpsI GAGTC 3 cut(s) 224, 992, 1224
Psp1406I AACGTT 2 cut(s) 539, 557
Psp6I CCWGG 1 cut(s) 1093
PspEI GGTNACC 1 cut(s) 509
PspGI CCWGG 1 cut(s) 1093
PspN4I GGNNCC 2 cut(s) 118, 753
PstNI CAGNNNCTG 1 cut(s) 233
PsuI RGATCY 3 cut(s) 326, 573, 822
PsyI GACNNNGTC 1 cut(s) 233
PvuII CAGCTG 1 cut(s) 653
RsaI GTAC 3 cut(s) 87, 977, 1011
RsaNI GTAC 3 cut(s) 86, 976, 1010
RseI CAYNNNNRTG 1 cut(s) 923
SapI GCTCTTC 1 cut(s) 588
SaqAI TTAA 3 cut(s) 150, 627, 1271
SatI GCNGC 5 cut(s) 7, 10, 13, 896, 1249
Sau3AI GATC 8 cut(s) 54, 326, 573, 679, 729, 822, 952, 1266
SchI GAGTC 3 cut(s) 224, 992, 1224
ScrFI CCNGG 2 cut(s) 980, 1095
SfaNI GCATC 4 cut(s) 397, 796, 818, 1190
SfcI CTRYAG 2 cut(s) 309, 1236
SmiMI CAYNNNNRTG 1 cut(s) 923
Sse9I AATT 2 cut(s) 121, 843
SsiI CCGC 6 cut(s) 734, 744, 895, 1158, 1227, 1295
SspMI CTAG 1 cut(s) 305
StyD4I CCNGG 2 cut(s) 978, 1093
StyI CCWWGG 2 cut(s) 107, 828
TaaI ACNGT 2 cut(s) 468, 1069
TaiI ACGT 2 cut(s) 542, 560
TaqI TCGA 3 cut(s) 256, 353, 719
TasI AATT 2 cut(s) 121, 843
TatI WGTACW 1 cut(s) 1009
TauI GCSGC 1 cut(s) 898
Tru1I TTAA 3 cut(s) 150, 627, 1271
Tru9I TTAA 3 cut(s) 150, 627, 1271
TscAI CASTG 1 cut(s) 165
TseFI GTSAC 1 cut(s) 925
TseI GCWGC 4 cut(s) 6, 9, 12, 1248
Tsp45I GTSAC 1 cut(s) 925
TspDTI ATGAA 2 cut(s) 1138, 1305
TspGWI ACGGA 2 cut(s) 134, 1251
TspRI CASTG 1 cut(s) 165
Tth111I GACNNNGTC 1 cut(s) 233
Van91I CCANNNNNTGG 2 cut(s) 113, 656
XceI RCATGY 1 cut(s) 692
XcmI CCANNNNNNNNNTGG 1 cut(s) 193
XmiI GTMKAC 1 cut(s) 237
XspI CTAG 1 cut(s) 305
Zsp2I ATGCAT 1 cut(s) 811
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.