Prupe.2G330100_v2.0.a1

Folate-Biopterin Transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0011273
Physical Location & Seq
Forward (+)
30322252 .. 30325015
2764 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G330100.1

Sequence Viewer

Length: 1320 bp
ATGGTAGTGTCATCGGAGGAGGGTACGGACAAGATCCGGAAGGTGGTGGGATTTGGGTACTGGGTGCAGGGCTTCAGGTGCTTCCCATGGATGGCCGTCAACTTCTTCCTCAAAGACGGCCTCCGCGTCGATTCCTCCACTCTCCAGCTCCTCCAGAATTCCGCCAACCTCCCCATGGTCGCCAAGCCCCTTTACGGTGTTGTTTCCGACGCCGTCTACATTCGTGGCCAGCACCGCATACCTTATATCGCCTTCGGAGCTTTCTTACAAGCAGTGTCATGGCTAGCCATAGCAATCCTCTCTGAATCAGGCATTTCAATTGGCACCATGACACTATATCTTCTCCTTAGTAATCTCGGTGCTTCAATTGCTGAGGTAGCCAATGATGCCATTGTTGCAGAGGCGGGAAAGCAGTCTAAGTCCTCCAAAAATTCTCAACCATCATCCTCAGGCGAGCTCCAATCATTTTTCTGGATGGCTTCAGCTATGGGTGGAGTCCTTGGATTTCTCCTAGCTGGTCTTTCCATTGACAGATTCTCTCCCCAGAAGATGTTCCTGTTCTATGGCCTTCTCCTTACTGTCCAGTTTTTTCTAAGCATTTTTGTCCAGGAGAGTTCTTTGGACCTTCCCAAGAGGACAGCCAACGTTGGGATTCAAGAGAAGTTTACAGAGCTCTTGGTTGCACTAAGGGAACCTGAGATTGCTTACTCAATTACATGGTTTGCGGCTTCTTATGCCATTATTCCTGCATTGACAGGCACCATGTTCTTTTACCAGACGCAGTATCTGAATATTGACTCATCAGTGTTGGGAATCTCAAAGGTGTTTGGCCAAGTGGCAATGCTTCTATGGAGTGTCATCTATAATCGTCACTTGAAGTCAGTCACACCAAGAAAACTGATTTCTGCCATTCAGGTTACAATGGCTGTATTTATGGTTTCTGATGTGTTGTTTGTGAATAGGATTTATCGAAATTACATGGGGGTGCCAGACAATTTCTACGTTGTGATGTTTTCTGGCCTTTCGGAGGTTCTCTTCTTTATTAAGATTCTGCCCTTCAGCATTCTTATAGCCAAGCTCTGCCCACGGGGATGCGAGGGATCTCTAATGGCATTTGTAATGTCTGCAATAGCGGTTGCATTCATAGTCAGTGGATATCTTGGCGTTGTGCTTGCGTCGTATGTTGGGGTCACAGGAAATGATTTTTCAGGGTTTCCACTTGCCCTACTAATACAGGCACTTCTCACACTGTTGCCTCTATATTGGTCATCTTGTATCCCCGATGATGTAAAATCAAAAACCAGTCGGAAAAAGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BT1

Protein Analysis

440

Amino Acids

48.32

Weight (kDa)

9.16

Isoelectric Point (pI)

34.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64890
fragaria_vesca FvH4_7g34292
malus_domestica MD07G1311100.v1.1
prunus_persica Prupe.2G330100_v2.0.a1
pyrus_communis pycom07g28340
rosa_chinensis RchiOBHm_Chr1g0384681
rosa_laevigata RLG00000026016
rosa_multiflora Rmu_sc0012136.1_g000022
rosa_roxburghii Rroxscaffold_4G00276470 Rroxscaffold_7G00218000
rosa_rugosa Rorug01G0450700 Rorug01G0450700 Rorug01G0450800
rosa_samantha Rh1AG475200 Rh1BG433400 Rh1CG446800 Rh1CG446900 Rh1DG465900 Rh6BG010000
rosa_wichuraiana Rw1G039740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 323, 758, 985
AccI GTMKAC 1 cut(s) 216
AccII CGCG 1 cut(s) 126
AccIII TCCGGA 1 cut(s) 36
AciI CCGC 6 cut(s) 124, 162, 235, 404, 725, 1133
AclI AACGTT 1 cut(s) 645
AclWI GGATC 2 cut(s) 28, 1108
AcoI YGGCCR 3 cut(s) 93, 226, 829
AcsI RAATTY 2 cut(s) 157, 430
AcuI CTGAAG 3 cut(s) 58, 465, 1042
AcyI GRCGYC 1 cut(s) 210
AfaI GTAC 2 cut(s) 25, 59
AfiI CCNNNNNNNGG 6 cut(s) 43, 91, 175, 194, 648, 1027
AgsI TTSAA 4 cut(s) 318, 366, 656, 877
AjnI CCWGG 1 cut(s) 606
AluBI AGCT 7 cut(s) 148, 260, 457, 485, 515, 673, 1078
AluI AGCT 7 cut(s) 148, 260, 457, 485, 515, 673, 1078
Alw21I GWGCWC 2 cut(s) 459, 675
AlwI GGATC 2 cut(s) 28, 1108
AlwNI CAGNNNCTG 1 cut(s) 787
Aor13HI TCCGGA 1 cut(s) 36
AoxI GGCC 6 cut(s) 93, 118, 226, 565, 829, 1018
ApoI RAATTY 2 cut(s) 157, 430
Asp700I GAANNNNTTC 1 cut(s) 551
AspS9I GGNCC 1 cut(s) 622
AsuNHI GCTAGC 1 cut(s) 283
AvaII GGWCC 1 cut(s) 622
AxyI CCTNAGG 1 cut(s) 448
BalI TGGCCA 2 cut(s) 228, 831
BanI GGYRCC 3 cut(s) 323, 758, 985
BanII GRGCYC 2 cut(s) 459, 675
Bbv12I GWGCWC 2 cut(s) 459, 675
BbvCI CCTCAGC 1 cut(s) 372
BccI CCATC 3 cut(s) 85, 448, 469
BceAI ACGGC 3 cut(s) 80, 133, 197
BciT130I CCWGG 1 cut(s) 608
BciVI GTATCC 1 cut(s) 1286
BfaI CTAG 2 cut(s) 284, 512
BfuI GTATCC 1 cut(s) 1286
BisI GCNGC 1 cut(s) 726
BlsI GCNGC 1 cut(s) 727
Bme1390I CCNGG 1 cut(s) 608
Bme18I GGWCC 1 cut(s) 622
BmgT120I GGNCC 1 cut(s) 622
BmiI GGNNCC 4 cut(s) 325, 693, 760, 987
BmrFI CCNGG 1 cut(s) 608
BmrI ACTGGG 1 cut(s) 70
BmsI GCATC 2 cut(s) 376, 1082
BmtI GCTAGC 1 cut(s) 287
BmuI ACTGGG 1 cut(s) 70
BpmI CTGGAG 2 cut(s) 128, 137
Bpu10I CCTNAGC 1 cut(s) 372
BsaHI GRCGYC 1 cut(s) 210
BsaJI CCNNGG 4 cut(s) 86, 174, 499, 1085
BsaWI WCCGGW 1 cut(s) 36
Bsc4I CCNNNNNNNGG 6 cut(s) 43, 91, 175, 194, 648, 1027
Bse1I ACTGG 3 cut(s) 65, 583, 1302
Bse21I CCTNAGG 1 cut(s) 448
Bse3DI GCAATG 1 cut(s) 846
BseAI TCCGGA 1 cut(s) 36
BseBI CCWGG 1 cut(s) 608
BseDI CCNNGG 4 cut(s) 86, 174, 499, 1085
BseGI GGATG 4 cut(s) 96, 443, 480, 1097
BseLI CCNNNNNNNGG 6 cut(s) 43, 91, 175, 194, 648, 1027
BseMI GCAATG 1 cut(s) 846
BseMII CTCAG 3 cut(s) 363, 462, 687
BseNI ACTGG 3 cut(s) 65, 583, 1302
BseRI GAGGAG 2 cut(s) 32, 140
BsgI GTGCAG 1 cut(s) 86
Bsh1236I CGCG 1 cut(s) 126
BshFI GGCC 6 cut(s) 95, 120, 228, 567, 831, 1020
BshNI GGYRCC 3 cut(s) 323, 758, 985
BsiHKAI GWGCWC 2 cut(s) 459, 675
BsiSI CCGG 1 cut(s) 37
BslI CCNNNNNNNGG 6 cut(s) 43, 91, 175, 194, 648, 1027
BsmI GAATGC 2 cut(s) 1062, 1139
BsnI GGCC 6 cut(s) 95, 120, 228, 567, 831, 1020
Bsp1286I GDGCHC 2 cut(s) 459, 675
Bsp13I TCCGGA 1 cut(s) 36
Bsp143I GATC 2 cut(s) 33, 1100
Bsp19I CCATGG 2 cut(s) 86, 174
BspACI CCGC 6 cut(s) 124, 162, 235, 404, 725, 1133
BspANI GGCC 6 cut(s) 95, 120, 228, 567, 831, 1020
BspCNI CTCAG 3 cut(s) 364, 461, 688
BspEI TCCGGA 1 cut(s) 36
BspFNI CGCG 1 cut(s) 126
BspLI GGNNCC 4 cut(s) 325, 693, 760, 987
BspOI GCTAGC 1 cut(s) 287
BspPI GGATC 2 cut(s) 28, 1108
BspT107I GGYRCC 3 cut(s) 323, 758, 985
BsrDI GCAATG 1 cut(s) 846
BsrI ACTGG 3 cut(s) 65, 583, 1302
BssECI CCNNGG 4 cut(s) 86, 174, 499, 1085
BssMI GATC 2 cut(s) 33, 1100
BssNI GRCGYC 1 cut(s) 210
BssT1I CCWWGG 3 cut(s) 86, 174, 499
Bst2UI CCWGG 1 cut(s) 608
Bst4CI ACNGT 3 cut(s) 197, 580, 1251
Bst6I CTCTTC 1 cut(s) 1040
BstACI GRCGYC 1 cut(s) 210
BstC8I GCNNGC 4 cut(s) 230, 285, 455, 1173
BstDEI CTNAG 7 cut(s) 347, 372, 417, 448, 593, 686, 696
BstDSI CCRYGG 3 cut(s) 86, 174, 1085
BstENI CCTNNNNNAGG 1 cut(s) 1025
BstF5I GGATG 4 cut(s) 96, 443, 480, 1097
BstFNI CGCG 1 cut(s) 126
BstKTI GATC 2 cut(s) 36, 1103
BstMBI GATC 2 cut(s) 33, 1100
BstMWI GCNNNNNNNGC 8 cut(s) 78, 234, 257, 368, 377, 386, 395, 734
BstNI CCWGG 1 cut(s) 608
BstSCI CCNGG 1 cut(s) 606
BstUI CGCG 1 cut(s) 126
BstX2I RGATCY 2 cut(s) 33, 1100
BstYI RGATCY 2 cut(s) 33, 1100
Bsu36I CCTNAGG 1 cut(s) 448
BsuI GTATCC 1 cut(s) 1286
BsuRI GGCC 6 cut(s) 95, 120, 228, 567, 831, 1020
BtgI CCRYGG 3 cut(s) 86, 174, 1085
BtsCI GGATG 4 cut(s) 96, 443, 480, 1097
BtsI GCAGTG 1 cut(s) 279
BtsIMutI CAGTG 4 cut(s) 279, 810, 1156, 1247
Cac8I GCNNGC 4 cut(s) 230, 285, 455, 1173
CaiI CAGNNNCTG 1 cut(s) 787
Cfr13I GGNCC 1 cut(s) 622
CseI GACGC 4 cut(s) 115, 218, 787, 1164
Csp6I GTAC 2 cut(s) 24, 58
CviAII CATG 7 cut(s) 87, 175, 279, 328, 717, 763, 979
CviQI GTAC 2 cut(s) 24, 58
DdeI CTNAG 7 cut(s) 347, 372, 417, 448, 593, 686, 696
DpnI GATC 2 cut(s) 35, 1102
DpnII GATC 2 cut(s) 33, 1100
EaeI YGGCCR 3 cut(s) 93, 226, 829
Eam1104I CTCTTC 1 cut(s) 1040
EarI CTCTTC 1 cut(s) 1040
EciI GGCGGA 1 cut(s) 151
Ecl136II GAGCTC 2 cut(s) 457, 673
Eco130I CCWWGG 3 cut(s) 86, 174, 499
Eco24I GRGCYC 2 cut(s) 459, 675
Eco32I GATATC 1 cut(s) 1157
Eco47I GGWCC 1 cut(s) 622
Eco53kI GAGCTC 2 cut(s) 457, 673
Eco57I CTGAAG 3 cut(s) 58, 465, 1042
Eco81I CCTNAGG 1 cut(s) 448
EcoICRI GAGCTC 2 cut(s) 457, 673
EcoNI CCTNNNNNAGG 1 cut(s) 1025
EcoRI GAATTC 1 cut(s) 157
EcoRII CCWGG 1 cut(s) 606
EcoRV GATATC 1 cut(s) 1157
EcoT14I CCWWGG 3 cut(s) 86, 174, 499
EcoT38I GRGCYC 2 cut(s) 459, 675
ErhI CCWWGG 3 cut(s) 86, 174, 499
FaeI CATG 7 cut(s) 90, 178, 282, 331, 720, 766, 982
FatI CATG 7 cut(s) 86, 174, 278, 327, 716, 762, 978
FauI CCCGC 1 cut(s) 397
FblI GTMKAC 1 cut(s) 216
Fnu4HI GCNGC 1 cut(s) 726
FokI GGATG 4 cut(s) 103, 430, 487, 1104
FriOI GRGCYC 2 cut(s) 459, 675
Fsp4HI GCNGC 1 cut(s) 726
FspBI CTAG 2 cut(s) 284, 512
GluI GCNGC 1 cut(s) 726
GsuI CTGGAG 2 cut(s) 128, 137
HaeIII GGCC 6 cut(s) 95, 120, 228, 567, 831, 1020
HapII CCGG 1 cut(s) 37
HgaI GACGC 4 cut(s) 115, 218, 787, 1164
Hin1I GRCGYC 1 cut(s) 210
Hin1II CATG 7 cut(s) 90, 178, 282, 331, 720, 766, 982
HincII GTYRAC 1 cut(s) 100
HindII GTYRAC 1 cut(s) 100
HinfI GANTC 8 cut(s) 131, 305, 495, 534, 652, 797, 813, 1048
HpaII CCGG 1 cut(s) 37
Hpy166II GTNNAC 3 cut(s) 100, 217, 666
Hpy188I TCNGA 8 cut(s) 16, 208, 257, 304, 789, 943, 1027, 1308
Hpy188III TCNNGA 4 cut(s) 37, 154, 472, 656
Hpy8I GTNNAC 3 cut(s) 100, 217, 666
Hpy99I CGWCG 3 cut(s) 131, 212, 1180
HpyAV CCTTC 5 cut(s) 34, 262, 578, 635, 1066
HpyCH4III ACNGT 3 cut(s) 197, 580, 1251
HpyCH4IV ACGT 2 cut(s) 645, 1002
HpyCH4V TGCA 6 cut(s) 67, 398, 683, 749, 1127, 1139
HpyF10VI GCNNNNNNNGC 8 cut(s) 78, 234, 257, 368, 377, 386, 395, 734
HpyF3I CTNAG 7 cut(s) 347, 372, 417, 448, 593, 686, 696
HpySE526I ACGT 2 cut(s) 645, 1002
Hsp92I GRCGYC 1 cut(s) 210
Hsp92II CATG 7 cut(s) 90, 178, 282, 331, 720, 766, 982
Kpn2I TCCGGA 1 cut(s) 36
Kzo9I GATC 2 cut(s) 33, 1100
LmnI GCTCC 3 cut(s) 153, 257, 462
LweI GCATC 2 cut(s) 376, 1082
MaeI CTAG 2 cut(s) 284, 512
MaeII ACGT 2 cut(s) 645, 1002
MaeIII GTNAC 4 cut(s) 869, 883, 916, 1189
MalI GATC 2 cut(s) 35, 1102
MboI GATC 2 cut(s) 33, 1100
MboII GAAGA 4 cut(s) 97, 332, 559, 1027
MfeI CAATTG 2 cut(s) 318, 366
MflI RGATCY 2 cut(s) 33, 1100
MhlI GDGCHC 2 cut(s) 459, 675
MlsI TGGCCA 2 cut(s) 228, 831
MluCI AATT 7 cut(s) 157, 318, 366, 430, 711, 973, 994
MluNI TGGCCA 2 cut(s) 228, 831
MlyI GAGTC 2 cut(s) 504, 791
MmeI TCCRAC 2 cut(s) 231, 1286
Mox20I TGGCCA 2 cut(s) 228, 831
MroI TCCGGA 1 cut(s) 36
MroXI GAANNNNTTC 1 cut(s) 551
MscI TGGCCA 2 cut(s) 228, 831
MseI TTAA 1 cut(s) 1044
MslI CAYNNNNRTG 2 cut(s) 983, 1090
Msp20I TGGCCA 2 cut(s) 228, 831
MspI CCGG 1 cut(s) 37
MspR9I CCNGG 1 cut(s) 608
MunI CAATTG 2 cut(s) 318, 366
Mva1269I GAATGC 2 cut(s) 1062, 1139
MvaI CCWGG 1 cut(s) 608
MvnI CGCG 1 cut(s) 126
MwoI GCNNNNNNNGC 8 cut(s) 78, 234, 257, 368, 377, 386, 395, 734
NcoI CCATGG 2 cut(s) 86, 174
NdeII GATC 2 cut(s) 33, 1100
NheI GCTAGC 1 cut(s) 283
NlaIII CATG 7 cut(s) 90, 178, 282, 331, 720, 766, 982
NlaIV GGNNCC 4 cut(s) 325, 693, 760, 987
NmuCI GTSAC 3 cut(s) 869, 883, 1189
PcsI WCGNNNNNNNCGW 1 cut(s) 123
PctI GAATGC 2 cut(s) 1062, 1139
PdmI GAANNNNTTC 1 cut(s) 551
PfeI GAWTC 6 cut(s) 131, 305, 534, 652, 813, 1048
PflFI GACNNNGTC 1 cut(s) 212
PfoI TCCNGGA 1 cut(s) 606
PkrI GCNGC 1 cut(s) 727
PleI GAGTC 2 cut(s) 503, 791
PpsI GAGTC 2 cut(s) 503, 791
Psp124BI GAGCTC 2 cut(s) 459, 675
Psp1406I AACGTT 1 cut(s) 645
Psp6I CCWGG 1 cut(s) 606
PspGI CCWGG 1 cut(s) 606
PspN4I GGNNCC 4 cut(s) 325, 693, 760, 987
PspPI GGNCC 1 cut(s) 622
PstNI CAGNNNCTG 1 cut(s) 787
PsuI RGATCY 2 cut(s) 33, 1100
PsyI GACNNNGTC 1 cut(s) 212
RsaI GTAC 2 cut(s) 25, 59
RsaNI GTAC 2 cut(s) 24, 58
RseI CAYNNNNRTG 2 cut(s) 983, 1090
SacI GAGCTC 2 cut(s) 459, 675
SaqAI TTAA 1 cut(s) 1044
SatI GCNGC 1 cut(s) 726
Sau3AI GATC 2 cut(s) 33, 1100
Sau96I GGNCC 1 cut(s) 622
SchI GAGTC 2 cut(s) 504, 791
ScrFI CCNGG 1 cut(s) 608
SduI GDGCHC 2 cut(s) 459, 675
SfaNI GCATC 2 cut(s) 376, 1082
SinI GGWCC 1 cut(s) 622
SmiMI CAYNNNNRTG 2 cut(s) 983, 1090
Sse9I AATT 7 cut(s) 157, 318, 366, 430, 711, 973, 994
SsiI CCGC 6 cut(s) 124, 162, 235, 404, 725, 1133
SspI AATATT 1 cut(s) 793
SspMI CTAG 2 cut(s) 284, 512
SstI GAGCTC 2 cut(s) 459, 675
StyD4I CCNGG 1 cut(s) 606
StyI CCWWGG 3 cut(s) 86, 174, 499
TaaI ACNGT 3 cut(s) 197, 580, 1251
TaiI ACGT 2 cut(s) 648, 1005
TaqI TCGA 2 cut(s) 129, 970
TasI AATT 7 cut(s) 157, 318, 366, 430, 711, 973, 994
TauI GCSGC 1 cut(s) 728
TfiI GAWTC 6 cut(s) 131, 305, 534, 652, 813, 1048
Tru1I TTAA 1 cut(s) 1044
Tru9I TTAA 1 cut(s) 1044
TscAI CASTG 4 cut(s) 279, 810, 1156, 1254
TseFI GTSAC 3 cut(s) 869, 883, 1189
Tsp45I GTSAC 3 cut(s) 869, 883, 1189
TspDTI ATGAA 1 cut(s) 1132
TspGWI ACGGA 1 cut(s) 41
TspRI CASTG 4 cut(s) 279, 810, 1156, 1254
Tth111I GACNNNGTC 1 cut(s) 212
VpaK11BI GGWCC 1 cut(s) 622
XagI CCTNNNNNAGG 1 cut(s) 1025
XapI RAATTY 2 cut(s) 157, 430
XcmI CCANNNNNNNNNTGG 1 cut(s) 172
XmiI GTMKAC 1 cut(s) 216
XmnI GAANNNNTTC 1 cut(s) 551
XspI CTAG 2 cut(s) 284, 512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.