Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010355

Physical Location & Seq

Genomic Coordinates Forward (+)

26084562 .. 26086512

Gene Structure 1951 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G69390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 690 bp

ATGGCGATGTCTTCTGGAACTCTCAGGATCTCTGCGACCTTAGTATCTCCTTATCATCATCACCACCGTAATCGCCTCTCATTACCTTCTTCTTCTTCCAAGGTTGATTTCACGGGATTCATAAGCAATGGCGTAAACAGTTTGGAAACTCAGAAATGTACTCCTGGACTGGCGATCAGCCGCGAAAACACACGAGGTCAGGTGAAGGTTCTTGCAAGGAACACCGGAGACTATGAACTATCACCAAGCCCAGCAGAGCAAGAGATAGAGAGCTTTCTCTATAATGCCATCAACATGGGTTTCTTTGACAGGTTAAACTTGGCTTGGAAGATAATATTCCCATCTCACGCATCAAGAAGAAGCTCCAACGCAAGAATTGCAAAGCAGCGGCTCAAGATGATCCTCTTCTCCGACAGGTGTGATGTTAGTGACGAAGCTAAAAGGAAAATCGTCAACAACATTATCCATGCACTGTCGGATTTCGTAGAGATAGAATCAGAGGAAAAAGTTCAGCTAAATGTTTCCACGGACGGTGACCTTGGGACCATTTACTCGGTCACGGTGCCTGTTAGAAGGGTGAAACCAGAGTACCAAGACGTGGACGAGGCTGGAACCATAACCAACGTGGAATACAAAGATACCCGTGATGGTTCTGTCGATGTCAGGTTCGATTTTTATGTTCCAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010020 GO:0016043 GO:0019899 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0044424 GO:0044444 GO:0044464 GO:0048285 GO:0051117 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MinE

Protein Analysis

229

Amino Acids

25.75

Weight (kDa)

6.32

Isoelectric Point (pI)

53.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MinE	PF03776	124 - 191	1.2e-13	Septum formation topological specificity factor MinE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010355)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69390
fragaria_vesca	FvH4_4g30590
malus_domestica	MD16G1066100.v1.1
prunus_persica	Prupe.1G281100_v2.0.a1
pyrus_communis	pycom13g05910 pycom16g05760
rosa_chinensis	RchiOBHm_Chr4g0438981 RchiOBHm_Chr5g0013451
rosa_laevigata	RLG00000006313
rosa_multiflora	Rmu_sc0005887.1_g000007 Rmu_sc0018732.1_g000001 Rmu_sc0023005.1_g000005 Rmu_sc0023254.1_g000001
rosa_roxburghii	Rroxscaffold_5G00380000
rosa_rugosa	Rorug04G0314900
rosa_samantha	Rh4AG365500 Rh4BG376700 Rh4CG390800 Rh4DG371400
rosa_wichuraiana	Rw0G007380 Rw0G016930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	562
AccB7I	CCANNNNNTGG	1 cut(s)	598
AccII	CGCG	1 cut(s)	183
AciI	CCGC	2 cut(s)	181, 388
AclWI	GGATC	2 cut(s)	35, 394
AfaI	GTAC	2 cut(s)	160, 590
AfiI	CCNNNNNNNGG	1 cut(s)	598
AjiI	CACGTC	1 cut(s)	598
AjnI	CCWGG	1 cut(s)	163
AjuI	GAANNNNNNNTTGG	2 cut(s)	92, 124
AluBI	AGCT	4 cut(s)	273, 363, 437, 514
AluI	AGCT	4 cut(s)	273, 363, 437, 514
Alw26I	GTCTC	1 cut(s)	222
AlwI	GGATC	2 cut(s)	35, 394
ApeKI	GCWGC	1 cut(s)	385
Asp700I	GAANNNNTTC	1 cut(s)	507
AspS9I	GGNCC	1 cut(s)	543
AsuHPI	GGTGA	5 cut(s)	53, 214, 234, 545, 589
AvaII	GGWCC	1 cut(s)	543
BaeI	ACNNNNGTAYC	4 cut(s)	27, 60, 572, 605
BanI	GGYRCC	1 cut(s)	562
BauI	CACGAG	1 cut(s)	192
BbsI	GAAGAC	1 cut(s)	3
BbvI	GCAGC	1 cut(s)	397
BccI	CCATC	3 cut(s)	296, 349, 641
BciT130I	CCWGG	1 cut(s)	165
BcoDI	GTCTC	1 cut(s)	222
BisI	GCNGC	3 cut(s)	181, 386, 389
BlsI	GCNGC	3 cut(s)	182, 387, 390
Bme1390I	CCNGG	1 cut(s)	165
Bme18I	GGWCC	1 cut(s)	543
BmgBI	CACGTC	1 cut(s)	598
BmgT120I	GGNCC	1 cut(s)	543
BmiI	GGNNCC	3 cut(s)	544, 564, 613
BmrFI	CCNGG	1 cut(s)	165
BmsI	GCATC	1 cut(s)	359
BpiI	GAAGAC	1 cut(s)	3
BpuEI	CTTGAG	1 cut(s)	377
BsaJI	CCNNGG	3 cut(s)	99, 525, 538
BsaWI	WCCGGW	1 cut(s)	224
Bsc4I	CCNNNNNNNGG	1 cut(s)	598
Bse1I	ACTGG	1 cut(s)	174
Bse3DI	GCAATG	1 cut(s)	133
BseBI	CCWGG	1 cut(s)	165
BseDI	CCNNGG	3 cut(s)	99, 525, 538
BseLI	CCNNNNNNNGG	1 cut(s)	598
BseMI	GCAATG	1 cut(s)	133
BseMII	CTCAG	2 cut(s)	37, 164
BseNI	ACTGG	1 cut(s)	174
BseXI	GCAGC	1 cut(s)	397
BseYI	CCCAGC	1 cut(s)	250
Bsh1236I	CGCG	1 cut(s)	183
BshNI	GGYRCC	1 cut(s)	562
BsiSI	CCGG	1 cut(s)	225
BslFI	GGGAC	1 cut(s)	556
BslI	CCNNNNNNNGG	1 cut(s)	598
BsmAI	GTCTC	1 cut(s)	222
BsmFI	GGGAC	1 cut(s)	556
Bsp143I	GATC	3 cut(s)	27, 174, 399
BspACI	CCGC	2 cut(s)	181, 388
BspCNI	CTCAG	2 cut(s)	36, 163
BspFNI	CGCG	1 cut(s)	183
BspLI	GGNNCC	3 cut(s)	544, 564, 613
BspPI	GGATC	2 cut(s)	35, 394
BspT107I	GGYRCC	1 cut(s)	562
BsrDI	GCAATG	1 cut(s)	133
BsrI	ACTGG	1 cut(s)	174
BssECI	CCNNGG	3 cut(s)	99, 525, 538
BssMI	GATC	3 cut(s)	27, 174, 399
BssSI	CACGAG	1 cut(s)	192
BssT1I	CCWWGG	2 cut(s)	99, 538
Bst2BI	CACGAG	1 cut(s)	192
Bst2UI	CCWGG	1 cut(s)	165
Bst4CI	ACNGT	5 cut(s)	68, 140, 474, 533, 562
Bst6I	CTCTTC	1 cut(s)	410
BstAPI	GCANNNNNTGC	1 cut(s)	377
BstDEI	CTNAG	3 cut(s)	23, 40, 150
BstDSI	CCRYGG	1 cut(s)	525
BstEII	GGTNACC	1 cut(s)	533
BstFNI	CGCG	1 cut(s)	183
BstKTI	GATC	3 cut(s)	30, 177, 402
BstMAI	GTCTC	1 cut(s)	222
BstMBI	GATC	3 cut(s)	27, 174, 399
BstMWI	GCNNNNNNNGC	1 cut(s)	377
BstNI	CCWGG	1 cut(s)	165
BstPI	GGTNACC	1 cut(s)	533
BstSCI	CCNGG	1 cut(s)	163
BstUI	CGCG	1 cut(s)	183
BstV1I	GCAGC	1 cut(s)	397
BstV2I	GAAGAC	1 cut(s)	3
BstX2I	RGATCY	1 cut(s)	27
BstXI	CCANNNNNNTGG	1 cut(s)	295
BstYI	RGATCY	1 cut(s)	27
BtgI	CCRYGG	1 cut(s)	525
BtgZI	GCGATG	1 cut(s)	20
BtrI	CACGTC	1 cut(s)	598
BtsIMutI	CAGTG	1 cut(s)	470
Cfr13I	GGNCC	1 cut(s)	543
Csp6I	GTAC	2 cut(s)	159, 589
CviAII	CATG	2 cut(s)	295, 467
CviJI	RGCY	9 cut(s)	180, 249, 273, 323, 363, 391, 437, 514, 608
CviKI_1	RGCY	9 cut(s)	180, 249, 273, 323, 363, 391, 437, 514, 608
CviQI	GTAC	2 cut(s)	159, 589
DdeI	CTNAG	3 cut(s)	23, 40, 150
DpnI	GATC	3 cut(s)	29, 176, 401
DpnII	GATC	3 cut(s)	27, 174, 399
Eam1104I	CTCTTC	1 cut(s)	410
EarI	CTCTTC	1 cut(s)	410
Eco130I	CCWWGG	2 cut(s)	99, 538
Eco47I	GGWCC	1 cut(s)	543
Eco91I	GGTNACC	1 cut(s)	533
EcoO65I	GGTNACC	1 cut(s)	533
EcoRII	CCWGG	1 cut(s)	163
EcoT14I	CCWWGG	2 cut(s)	99, 538
ErhI	CCWWGG	2 cut(s)	99, 538
FaeI	CATG	2 cut(s)	298, 470
FaiI	YATR	7 cut(s)	122, 234, 282, 296, 468, 617, 678
FaqI	GGGAC	1 cut(s)	556
FatI	CATG	2 cut(s)	294, 466
Fnu4HI	GCNGC	3 cut(s)	181, 386, 389
Fsp4HI	GCNGC	3 cut(s)	181, 386, 389
GluI	GCNGC	3 cut(s)	181, 386, 389
GsaI	CCCAGC	1 cut(s)	254
HapII	CCGG	1 cut(s)	225
Hin1II	CATG	2 cut(s)	298, 470
HincII	GTYRAC	1 cut(s)	454
HindII	GTYRAC	1 cut(s)	454
HinfI	GANTC	2 cut(s)	117, 494
HpaII	CCGG	1 cut(s)	225
HphI	GGTGA	5 cut(s)	53, 214, 234, 545, 589
Hpy166II	GTNNAC	3 cut(s)	136, 454, 601
Hpy188I	TCNGA	4 cut(s)	153, 412, 478, 499
Hpy188III	TCNNGA	5 cut(s)	15, 25, 354, 394, 683
Hpy8I	GTNNAC	3 cut(s)	136, 454, 601
HpyAV	CCTTC	3 cut(s)	96, 199, 567
HpyCH4III	ACNGT	5 cut(s)	68, 140, 474, 533, 562
HpyCH4IV	ACGT	2 cut(s)	597, 624
HpyCH4V	TGCA	3 cut(s)	215, 380, 470
HpyF10VI	GCNNNNNNNGC	1 cut(s)	377
HpyF3I	CTNAG	3 cut(s)	23, 40, 150
HpySE526I	ACGT	2 cut(s)	597, 624
Hsp92II	CATG	2 cut(s)	298, 470
Kzo9I	GATC	3 cut(s)	27, 174, 399
LmnI	GCTCC	1 cut(s)	368
Lsp1109I	GCAGC	1 cut(s)	397
LweI	GCATC	1 cut(s)	359
MaeII	ACGT	2 cut(s)	597, 624
MaeIII	GTNAC	3 cut(s)	428, 533, 556
MalI	GATC	3 cut(s)	29, 176, 401
MboI	GATC	3 cut(s)	27, 174, 399
MboII	GAAGA	7 cut(s)	3, 81, 84, 87, 340, 369, 397
MflI	RGATCY	1 cut(s)	27
MluCI	AATT	1 cut(s)	375
MmeI	TCCRAC	3 cut(s)	390, 435, 456
MnlI	CCTC	5 cut(s)	86, 188, 413, 493, 598
MroXI	GAANNNNTTC	1 cut(s)	507
MseI	TTAA	1 cut(s)	314
MslI	CAYNNNNRTG	1 cut(s)	293
MspA1I	CMGCKG	1 cut(s)	388
MspI	CCGG	1 cut(s)	225
MspR9I	CCNGG	1 cut(s)	165
MvaI	CCWGG	1 cut(s)	165
MvnI	CGCG	1 cut(s)	183
MwoI	GCNNNNNNNGC	1 cut(s)	377
NdeII	GATC	3 cut(s)	27, 174, 399
NlaIII	CATG	2 cut(s)	298, 470
NlaIV	GGNNCC	3 cut(s)	544, 564, 613
NmuCI	GTSAC	3 cut(s)	428, 533, 556
PdmI	GAANNNNTTC	1 cut(s)	507
PfeI	GAWTC	2 cut(s)	117, 494
PflMI	CCANNNNNTGG	1 cut(s)	598
PfoI	TCCNGGA	1 cut(s)	163
PkrI	GCNGC	3 cut(s)	182, 387, 390
Psp6I	CCWGG	1 cut(s)	163
PspEI	GGTNACC	1 cut(s)	533
PspFI	CCCAGC	1 cut(s)	250
PspGI	CCWGG	1 cut(s)	163
PspN4I	GGNNCC	3 cut(s)	544, 564, 613
PspPI	GGNCC	1 cut(s)	543
PsuI	RGATCY	1 cut(s)	27
RsaI	GTAC	2 cut(s)	160, 590
RsaNI	GTAC	2 cut(s)	159, 589
RseI	CAYNNNNRTG	1 cut(s)	293
SaqAI	TTAA	1 cut(s)	314
SatI	GCNGC	3 cut(s)	181, 386, 389
Sau3AI	GATC	3 cut(s)	27, 174, 399
Sau96I	GGNCC	1 cut(s)	543
ScrFI	CCNGG	1 cut(s)	165
SfaNI	GCATC	1 cut(s)	359
SinI	GGWCC	1 cut(s)	543
SmiMI	CAYNNNNRTG	1 cut(s)	293
SmlI	CTYRAG	1 cut(s)	392
SmoI	CTYRAG	1 cut(s)	392
Sse9I	AATT	1 cut(s)	375
SsiI	CCGC	2 cut(s)	181, 388
SspI	AATATT	1 cut(s)	336
StyD4I	CCNGG	1 cut(s)	163
StyI	CCWWGG	2 cut(s)	99, 538
TaaI	ACNGT	5 cut(s)	68, 140, 474, 533, 562
TaiI	ACGT	2 cut(s)	600, 627
TaqI	TCGA	2 cut(s)	657, 669
TaqII	GACCGA	1 cut(s)	544
TasI	AATT	1 cut(s)	375
TatI	WGTACW	1 cut(s)	158
TauI	GCSGC	2 cut(s)	183, 391
TfiI	GAWTC	2 cut(s)	117, 494
Tru1I	TTAA	1 cut(s)	314
Tru9I	TTAA	1 cut(s)	314
TscAI	CASTG	1 cut(s)	477
TseFI	GTSAC	3 cut(s)	428, 533, 556
TseI	GCWGC	1 cut(s)	385
Tsp45I	GTSAC	3 cut(s)	428, 533, 556
TspDTI	ATGAA	2 cut(s)	109, 249
TspGWI	ACGGA	1 cut(s)	542
TspRI	CASTG	1 cut(s)	477
Van91I	CCANNNNNTGG	1 cut(s)	598
VpaK11BI	GGWCC	1 cut(s)	543
XcmI	CCANNNNNNNNNTGG	1 cut(s)	622
XmnI	GAANNNNTTC	1 cut(s)	507

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.