AT1G69820

Gamma-glutamyltranspeptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0011090
Physical Location & Seq
Reverse (-)
26283125 .. 26284908
1784 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G69820.1

Sequence Viewer

Length: 681 bp
ATGATGCTTGTTTTGAACATTCTTTCTCAATATGGGATTCCATCAGGTGTTTCGGGCTCTCTCGGGGTTCATCGACTTGTTGAGGCTCTGAAACACGCTTTCGCAGTTAGAATGAACCTTGGGGATCCGGATTTTGTCGATGTTTCTAAGGTTATTTCTGATATGTTGTCTACAAATTTTGCACAAGGCTTGAAGAAAAAGATAAACGACAACAAAACCTTTGATCCAAATTATTACGGTGGCAGGTGGGATCAGATTAACGACCATGGGACAAGCCATTTATCAATCATAGATAGCGAGAGGAATGTTGTTTCACTGACTAGTACAATAAACAGTTACTTTGGGGCATTGATGTTATCTCCAAGCACCGGAATTGTTCTGAACAACGAAATGGATGATTTCTCAATCCCCATGAAATCCAGCAGTAACCTAACTGTGCCACCACCGGCACCGGCCAATTTCATTCGTCCTGGGAAACGACCTCTGTCTTCTATGACACCCACCATTGTACTCAAGGATGGTAAAGTGAAAGCCTCCGTGGGTGCGAGCGGAGGACTGTACATCATCGCTGGGACAACAGAAGTTTTTCTGAATTATTTCTTCCTCAAGATGGATCCTCTTTCTTCCGTTTTGGCTCCAAGAATCTACCATCAGGTTTTTCGTTTTTTTATTTTTCCTTAG

Protein Analysis

226

Amino Acids

24.77

Weight (kDa)

9.07

Isoelectric Point (pI)

28.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G_glu_transpept PF01019 2 - 219 1.3e-73 Gamma-glutamyltranspeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011090)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G69820 AT4G39640 AT4G39640
fragaria_vesca FvH4_1g21940
malus_domestica MD05G1012900.v1.1 MD12G1028800.v1.1
prunus_persica Prupe.6G176700_v2.0.a1
pyrus_communis pycom12g02760
rosa_chinensis RchiOBHm_Chr2g0115961
rosa_laevigata RLG00000018227
rosa_multiflora Rmu_sc0016984.1_g000001 Rmu_ssc0000197.1_g000003
rosa_roxburghii Rroxscaffold_2G00127630 Rroxscaffold_2G00128460
rosa_rugosa Rorug02G0202000 Rorug02G0202100
rosa_samantha Rh2AG258400 Rh2BG269700 Rh2CG265000
rosa_wichuraiana Rw2G020270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 234
Acc36I ACCTGC 1 cut(s) 234
AccB1I GGYRCC 1 cut(s) 448
AccBSI CCGCTC 1 cut(s) 549
AccI GTMKAC 1 cut(s) 170
AccIII TCCGGA 1 cut(s) 127
AciI CCGC 1 cut(s) 549
AclWI GGATC 6 cut(s) 119, 132, 218, 258, 608, 621
AcoI YGGCCR 1 cut(s) 453
AcsI RAATTY 1 cut(s) 175
AfaI GTAC 3 cut(s) 325, 510, 560
AfiI CCNNNNNNNGG 2 cut(s) 368, 610
AgsI TTSAA 2 cut(s) 16, 193
AhlI ACTAGT 1 cut(s) 320
AjnI CCWGG 1 cut(s) 469
AlwI GGATC 6 cut(s) 119, 132, 218, 258, 608, 621
Ama87I CYCGRG 1 cut(s) 62
Aor13HI TCCGGA 1 cut(s) 127
AoxI GGCC 1 cut(s) 453
ApoI RAATTY 1 cut(s) 175
Asp700I GAANNNNTTC 2 cut(s) 585, 596
AvaI CYCGRG 1 cut(s) 62
BamHI GGATCC 2 cut(s) 124, 613
BanI GGYRCC 1 cut(s) 448
BanII GRGCYC 1 cut(s) 59
BbsI GAAGAC 1 cut(s) 480
BccI CCATC 4 cut(s) 49, 512, 604, 657
BciT130I CCWGG 1 cut(s) 471
BcuI ACTAGT 1 cut(s) 320
BfaI CTAG 1 cut(s) 321
BfuAI ACCTGC 1 cut(s) 234
Bme1390I CCNGG 1 cut(s) 471
BmeT110I CYCGRG 1 cut(s) 62
BmiI GGNNCC 4 cut(s) 126, 450, 615, 636
BmrFI CCNGG 1 cut(s) 471
BoxI GACNNNNGTC 1 cut(s) 484
BpiI GAAGAC 1 cut(s) 480
BpuEI CTTGAG 2 cut(s) 497, 590
BsaJI CCNNGG 4 cut(s) 118, 265, 470, 537
BsaWI WCCGGW 2 cut(s) 127, 368
Bsc4I CCNNNNNNNGG 2 cut(s) 368, 610
Bse118I RCCGGY 2 cut(s) 445, 451
BseAI TCCGGA 1 cut(s) 127
BseBI CCWGG 1 cut(s) 471
BseDI CCNNGG 4 cut(s) 118, 265, 470, 537
BseGI GGATG 2 cut(s) 400, 523
BseLI CCNNNNNNNGG 2 cut(s) 368, 610
BseYI CCCAGC 1 cut(s) 569
BshFI GGCC 1 cut(s) 455
BshNI GGYRCC 1 cut(s) 448
BsiHKCI CYCGRG 1 cut(s) 62
BsiSI CCGG 4 cut(s) 128, 369, 446, 452
BslFI GGGAC 2 cut(s) 283, 586
BslI CCNNNNNNNGG 2 cut(s) 368, 610
BsmFI GGGAC 2 cut(s) 283, 586
BsnI GGCC 1 cut(s) 455
BsoBI CYCGRG 1 cut(s) 62
Bsp1286I GDGCHC 1 cut(s) 59
Bsp13I TCCGGA 1 cut(s) 127
Bsp1407I TGTACA 1 cut(s) 558
Bsp143I GATC 4 cut(s) 124, 223, 250, 613
Bsp19I CCATGG 1 cut(s) 265
BspACI CCGC 1 cut(s) 549
BspANI GGCC 1 cut(s) 455
BspEI TCCGGA 1 cut(s) 127
BspLI GGNNCC 4 cut(s) 126, 450, 615, 636
BspMI ACCTGC 1 cut(s) 234
BspPI GGATC 6 cut(s) 119, 132, 218, 258, 608, 621
BspT107I GGYRCC 1 cut(s) 448
BsrBI CCGCTC 1 cut(s) 549
BsrFI RCCGGY 2 cut(s) 445, 451
BsrGI TGTACA 1 cut(s) 558
BssAI RCCGGY 2 cut(s) 445, 451
BssECI CCNNGG 4 cut(s) 118, 265, 470, 537
BssMI GATC 4 cut(s) 124, 223, 250, 613
BssT1I CCWWGG 2 cut(s) 118, 265
Bst2UI CCWGG 1 cut(s) 471
Bst4CI ACNGT 4 cut(s) 239, 335, 436, 558
BstAUI TGTACA 1 cut(s) 558
BstC8I GCNNGC 1 cut(s) 547
BstDEI CTNAG 2 cut(s) 147, 678
BstDSI CCRYGG 2 cut(s) 265, 537
BstF5I GGATG 2 cut(s) 400, 523
BstKTI GATC 4 cut(s) 127, 226, 253, 616
BstMBI GATC 4 cut(s) 124, 223, 250, 613
BstNI CCWGG 1 cut(s) 471
BstPAI GACNNNNGTC 1 cut(s) 484
BstSCI CCNGG 1 cut(s) 469
BstV2I GAAGAC 1 cut(s) 480
BstX2I RGATCY 2 cut(s) 124, 613
BstYI RGATCY 2 cut(s) 124, 613
BsuRI GGCC 1 cut(s) 455
BtgI CCRYGG 2 cut(s) 265, 537
BtgZI GCGATG 1 cut(s) 550
BtsCI GGATG 2 cut(s) 400, 523
BtsIMutI CAGTG 1 cut(s) 314
BveI ACCTGC 1 cut(s) 234
Cac8I GCNNGC 1 cut(s) 547
Cfr10I RCCGGY 2 cut(s) 445, 451
Csp6I GTAC 3 cut(s) 324, 509, 559
CviAII CATG 2 cut(s) 266, 412
CviJI RGCY 7 cut(s) 57, 86, 189, 276, 455, 533, 635
CviKI_1 RGCY 7 cut(s) 57, 86, 189, 276, 455, 533, 635
CviQI GTAC 3 cut(s) 324, 509, 559
DdeI CTNAG 2 cut(s) 147, 678
DpnI GATC 4 cut(s) 126, 225, 252, 615
DpnII GATC 4 cut(s) 124, 223, 250, 613
EaeI YGGCCR 1 cut(s) 453
Eco130I CCWWGG 2 cut(s) 118, 265
Eco24I GRGCYC 1 cut(s) 59
Eco88I CYCGRG 1 cut(s) 62
EcoRII CCWGG 1 cut(s) 469
EcoT14I CCWWGG 2 cut(s) 118, 265
EcoT38I GRGCYC 1 cut(s) 59
ErhI CCWWGG 2 cut(s) 118, 265
FaeI CATG 2 cut(s) 269, 415
FaiI YATR 6 cut(s) 33, 164, 267, 290, 413, 494
FaqI GGGAC 2 cut(s) 283, 586
FatI CATG 2 cut(s) 265, 411
FblI GTMKAC 1 cut(s) 170
FokI GGATG 2 cut(s) 407, 530
FriOI GRGCYC 1 cut(s) 59
FspBI CTAG 1 cut(s) 321
GsaI CCCAGC 1 cut(s) 573
HaeIII GGCC 1 cut(s) 455
HapII CCGG 4 cut(s) 128, 369, 446, 452
Hin1II CATG 2 cut(s) 269, 415
HinfI GANTC 2 cut(s) 37, 642
HpaII CCGG 4 cut(s) 128, 369, 446, 452
Hpy166II GTNNAC 1 cut(s) 171
Hpy188I TCNGA 5 cut(s) 90, 160, 255, 381, 591
Hpy188III TCNNGA 2 cut(s) 128, 607
Hpy8I GTNNAC 1 cut(s) 171
HpyCH4III ACNGT 4 cut(s) 239, 335, 436, 558
HpyCH4V TGCA 1 cut(s) 182
HpyF3I CTNAG 2 cut(s) 147, 678
Hsp92II CATG 2 cut(s) 269, 415
Kpn2I TCCGGA 1 cut(s) 127
Kzo9I GATC 4 cut(s) 124, 223, 250, 613
LmnI GCTCC 1 cut(s) 640
MaeI CTAG 1 cut(s) 321
MaeIII GTNAC 2 cut(s) 335, 425
MalI GATC 4 cut(s) 126, 225, 252, 615
MbiI CCGCTC 1 cut(s) 549
MboI GATC 4 cut(s) 124, 223, 250, 613
MboII GAAGA 4 cut(s) 205, 480, 592, 615
MflI RGATCY 2 cut(s) 124, 613
MhlI GDGCHC 1 cut(s) 59
MluCI AATT 5 cut(s) 175, 229, 372, 457, 592
MnlI CCTC 7 cut(s) 76, 294, 492, 544, 545, 614, 627
MroI TCCGGA 1 cut(s) 127
MroXI GAANNNNTTC 2 cut(s) 585, 596
MseI TTAA 1 cut(s) 258
MspI CCGG 4 cut(s) 128, 369, 446, 452
MspR9I CCNGG 1 cut(s) 471
MvaI CCWGG 1 cut(s) 471
NcoI CCATGG 1 cut(s) 265
NdeII GATC 4 cut(s) 124, 223, 250, 613
NlaIII CATG 2 cut(s) 269, 415
NlaIV GGNNCC 4 cut(s) 126, 450, 615, 636
PaqCI CACCTGC 1 cut(s) 234
PdmI GAANNNNTTC 2 cut(s) 585, 596
PfeI GAWTC 2 cut(s) 37, 642
PshAI GACNNNNGTC 1 cut(s) 484
Psp6I CCWGG 1 cut(s) 469
PspFI CCCAGC 1 cut(s) 569
PspGI CCWGG 1 cut(s) 469
PspN4I GGNNCC 4 cut(s) 126, 450, 615, 636
PsuI RGATCY 2 cut(s) 124, 613
RsaI GTAC 3 cut(s) 325, 510, 560
RsaNI GTAC 3 cut(s) 324, 509, 559
SaqAI TTAA 1 cut(s) 258
Sau3AI GATC 4 cut(s) 124, 223, 250, 613
ScrFI CCNGG 1 cut(s) 471
SduI GDGCHC 1 cut(s) 59
SetI ASST 8 cut(s) 49, 120, 153, 221, 248, 432, 484, 657
SmlI CTYRAG 2 cut(s) 512, 605
SmoI CTYRAG 2 cut(s) 512, 605
SpeI ACTAGT 1 cut(s) 320
Sse9I AATT 5 cut(s) 175, 229, 372, 457, 592
SsiI CCGC 1 cut(s) 549
SspMI CTAG 1 cut(s) 321
StyD4I CCNGG 1 cut(s) 469
StyI CCWWGG 2 cut(s) 118, 265
TaaI ACNGT 4 cut(s) 239, 335, 436, 558
TaqI TCGA 2 cut(s) 73, 138
TasI AATT 5 cut(s) 175, 229, 372, 457, 592
TatI WGTACW 3 cut(s) 323, 508, 558
TfiI GAWTC 2 cut(s) 37, 642
Tru1I TTAA 1 cut(s) 258
Tru9I TTAA 1 cut(s) 258
TscAI CASTG 1 cut(s) 321
TspDTI ATGAA 4 cut(s) 59, 128, 428, 451
TspGWI ACGGA 2 cut(s) 526, 616
TspRI CASTG 1 cut(s) 321
XapI RAATTY 1 cut(s) 175
XmiI GTMKAC 1 cut(s) 170
XmnI GAANNNNTTC 2 cut(s) 585, 596
XspI CTAG 1 cut(s) 321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.