Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000197.1

Orthogroup ID

OG0011090

Physical Location & Seq

Genomic Coordinates Forward (+)

13930 .. 18187

Gene Structure 4258 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000197.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

atggccgtctcaccaatccctattgtccacctgggcacatatgccagtttcaccaaccactctgcagattaccttataatatttaggcagaggaacaagaacaacgtgaaagaacaagtgctaaagccgagctctgtacaagtttgcaatgtcatatatggtgacgattttgcttaccgttgtacttctgtttctctcactgttaccttctactacgagcctccacgctgcgagtggttcaacccaaaacaggcgagaggggtggtgagtccggcatcaagtggcattggtggaggagccttcatgcttattaggcaaggcaatgggaaggcacaagcctttgatatgagagaaactgccccagcgctggcttctcagaacatgtatgctgccaatgctactttgaaaagtaaaggcgctctctctgtagcgattccaggggaactggcaggccttcatgaagcttggaaacaacatggaaggcttccatgggaaaggcttgtaaagcctgctgagcacctcgctcgtttgggatttaagatttcaccatacctcaacatgcaaatgactagaacagaatcaggaattttggcagatgagggccttcgtcatatatttacatcaaaagggaggctcttacagacaggtgtaacatgccgtaacaggaaactcgcagagacactcagacaaatctcaaagtttggtcccgtagccttctataatggttccattggatccaaattcattagagatattcaaaaggctggaggaatacttacaatgaatgatttgcaaagttataaagttaaagtgacaaagccagtatctattgacactctggggcataaaatactagctatgcctcccccttctggaggtcctcttttgatacttatgctaaacattctttccaaatatggaaatatttctggagtttccgatcctctttgggtccatcgacagattgagtccttgaagcatgtatttgctgtgaggatgaatcttggtgaccctgactttgttaatgtgactaaagttctagctgatatgctttctcctaaatttgccgaggagttaaagaaaaccatacttgacaacatgacatttgatcccagccattatggtggcaggtggggacagatcaatgatcatggcaccagtcatttgtccatcatagatcatgagcaaaatgccatctccatgaccactactgtgaattcatactttggtgcacaaatgctgtcatcaagtacaggaatagtcctaaacaatgaaatggatgatttctccatacctggaaatgtttcaacagttccaccaccagcgccagccaattttatcaggccgggaaaaagaccattgtcatcaatgacacctaccataatgctgaaggatgagcaacttaaagcagttgtaggtgcaagtggaggaaccatgatcattgctgcaacagcagaggtcctcttaaatcattttgcaaggggaatggatccactctcttctgtcctggctccacggttttatcatcagctgtatcctaatgtggtgcactatgagaactggacaaccgtgataggtgatcactttgaacttcctgctcaaatcaggaaatccctacaaaagaaaggccatgtccttgagcctcttgctggtggagctatttgccagtttatagttatagaagttttgaagaaaaatggaggtagtcaagagtttgtggccgtgagtgatccaagaaaaggagggattcctgctggtttctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006508 GO:0006518 GO:0006575 GO:0006749 GO:0006751 GO:0006790 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006857 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0008233 GO:0008238 GO:0008242 GO:0009056 GO:0009505 GO:0009506 GO:0009636 GO:0009987 GO:0015711 GO:0015833 GO:0016020 GO:0016740 GO:0016746 GO:0016755 GO:0016756 GO:0016787 GO:0019538 GO:0030054 GO:0030312 GO:0034220 GO:0034635 GO:0034641 GO:0034775 GO:0035443 GO:0035672 GO:0036374 GO:0042219 GO:0042221 GO:0042886 GO:0042939 GO:0043170 GO:0043171 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044273 GO:0044464 GO:0048046 GO:0050896 GO:0051179 GO:0051181 GO:0051186 GO:0051187 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0070011 GO:0070887 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0072337 GO:0072348 GO:0097237 GO:0098656 GO:0098754 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00430 ko00460 ko00480 ko00590 ko01100 map00430 map00460 map00480 map00590 map01100

Pfam Domains

Protein Families

G_glu_transpept

Protein Analysis

587

Amino Acids

64.25

Weight (kDa)

9.42

Isoelectric Point (pI)

36.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011090)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69820 AT4G39640 AT4G39640
fragaria_vesca	FvH4_1g21940
malus_domestica	MD05G1012900.v1.1 MD12G1028800.v1.1
prunus_persica	Prupe.6G176700_v2.0.a1
pyrus_communis	pycom12g02760
rosa_chinensis	RchiOBHm_Chr2g0115961
rosa_laevigata	RLG00000018227
rosa_multiflora	Rmu_sc0016984.1_g000001 Rmu_ssc0000197.1_g000003
rosa_roxburghii	Rroxscaffold_2G00127630 Rroxscaffold_2G00128460
rosa_rugosa	Rorug02G0202000 Rorug02G0202100
rosa_samantha	Rh2AG258400 Rh2BG269700 Rh2CG265000
rosa_wichuraiana	Rw2G020270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	77, 801
AarI	CACCTGC	1 cut(s)	1119
Acc36I	ACCTGC	1 cut(s)	1119
AccB1I	GGYRCC	1 cut(s)	1154
AclWI	GGATC	7 cut(s)	729, 742, 935, 1103, 1484, 1497, 1724
AcoI	YGGCCR	2 cut(s)	3, 1719
AcsI	RAATTY	4 cut(s)	585, 740, 1061, 1216
AcuI	CTGAAG	1 cut(s)	1409
AfaI	GTAC	3 cut(s)	138, 184, 1252
AfeI	AGCGCT	1 cut(s)	366
AfiI	CCNNNNNNNGG	6 cut(s)	250, 367, 872, 875, 1649, 1739
AflIII	ACRYGT	1 cut(s)	381
AgsI	TTSAA	7 cut(s)	241, 406, 758, 976, 1308, 1589, 1690
AjnI	CCWGG	4 cut(s)	30, 436, 1294, 1506
AleI	CACNNNNGTG	1 cut(s)	1211
AluBI	AGCT	6 cut(s)	132, 464, 857, 1043, 1531, 1658
AluI	AGCT	6 cut(s)	132, 464, 857, 1043, 1531, 1658
Alw21I	GWGCWC	4 cut(s)	134, 519, 1234, 1551
Alw26I	GTCTC	2 cut(s)	13, 671
Alw44I	GTGCAC	2 cut(s)	1230, 1547
AlwI	GGATC	7 cut(s)	729, 742, 935, 1103, 1484, 1497, 1724
Aor51HI	AGCGCT	1 cut(s)	366
AoxI	GGCC	6 cut(s)	3, 451, 601, 1343, 1627, 1719
ApaLI	GTGCAC	2 cut(s)	1230, 1547
ApeKI	GCWGC	3 cut(s)	228, 389, 1445
ApoI	RAATTY	4 cut(s)	585, 740, 1061, 1216
ArsI	GACNNNNNNTTYG	2 cut(s)	1001, 1033
Asp700I	GAANNNNTTC	2 cut(s)	925, 1303
AspLEI	GCGC	3 cut(s)	367, 419, 1327
AspS9I	GGNCC	5 cut(s)	601, 704, 878, 952, 1459
AsuC2I	CCSGG	1 cut(s)	1347
AsuHPI	GGTGA	7 cut(s)	3, 43, 173, 277, 537, 1019, 1589
AvaII	GGWCC	4 cut(s)	704, 878, 952, 1459
BaeGI	GKGCMC	3 cut(s)	38, 1234, 1551
BamHI	GGATCC	2 cut(s)	734, 1489
BanI	GGYRCC	1 cut(s)	1154
BanII	GRGCYC	1 cut(s)	134
Bbv12I	GWGCWC	4 cut(s)	134, 519, 1234, 1551
BbvI	GCAGC	3 cut(s)	215, 376, 1432
BccI	CCATC	3 cut(s)	963, 1178, 1202
BceAI	ACGGC	2 cut(s)	642, 1706
BcgI	CGANNNNNNTGC	2 cut(s)	506, 540
BciT130I	CCWGG	4 cut(s)	32, 438, 1296, 1508
BciVI	GTATCC	1 cut(s)	1545
BclI	TGATCA	3 cut(s)	1147, 1437, 1579
BcnI	CCSGG	1 cut(s)	1347
BcoDI	GTCTC	2 cut(s)	13, 671
BfaI	CTAG	4 cut(s)	570, 854, 1040, 1762
BfmI	CTRYAG	2 cut(s)	63, 426
BfoI	RGCGCY	3 cut(s)	368, 420, 1328
BfuAI	ACCTGC	1 cut(s)	1119
BfuI	GTATCC	1 cut(s)	1545
BisI	GCNGC	3 cut(s)	229, 390, 1446
BlpI	GCTNAGC	1 cut(s)	513
BlsI	GCNGC	3 cut(s)	230, 391, 1447
Bme1390I	CCNGG	5 cut(s)	32, 438, 1296, 1347, 1508
Bme18I	GGWCC	4 cut(s)	704, 878, 952, 1459
BmgT120I	GGNCC	5 cut(s)	601, 704, 878, 952, 1459
BmiI	GGNNCC	9 cut(s)	298, 706, 727, 736, 953, 1156, 1432, 1491, 1512
BmrFI	CCNGG	5 cut(s)	32, 438, 1296, 1347, 1508
BmsI	GCATC	1 cut(s)	284
BoxI	GACNNNNGTC	1 cut(s)	1360
BpmI	CTGGAG	3 cut(s)	786, 894, 951
Bpu1102I	GCTNAGC	1 cut(s)	513
BpuEI	CTTGAG	1 cut(s)	1658
BpuMI	CCSGG	1 cut(s)	1347
BsaJI	CCNNGG	5 cut(s)	31, 437, 488, 1068, 1514
Bsc4I	CCNNNNNNNGG	6 cut(s)	250, 367, 872, 875, 1649, 1739
Bse1I	ACTGG	6 cut(s)	45, 450, 821, 1158, 1565, 1666
Bse3DI	GCAATG	3 cut(s)	154, 328, 1440
BseBI	CCWGG	4 cut(s)	32, 438, 1296, 1508
BseDI	CCNNGG	5 cut(s)	31, 437, 488, 1068, 1514
BseGI	GGATG	3 cut(s)	1002, 1285, 1399
BseLI	CCNNNNNNNGG	6 cut(s)	250, 367, 872, 875, 1649, 1739
BseMI	GCAATG	3 cut(s)	154, 328, 1440
BseMII	CTCAG	3 cut(s)	389, 504, 697
BseNI	ACTGG	6 cut(s)	45, 450, 821, 1158, 1565, 1666
BseRI	GAGGAG	2 cut(s)	309, 1085
BseSI	GKGCMC	3 cut(s)	38, 1234, 1551
BseXI	GCAGC	3 cut(s)	215, 376, 1432
BseYI	CCCAGC	2 cut(s)	361, 1112
BshFI	GGCC	6 cut(s)	5, 453, 603, 1345, 1629, 1721
BshNI	GGYRCC	1 cut(s)	1154
BsiHKAI	GWGCWC	4 cut(s)	134, 519, 1234, 1551
BsiSI	CCGG	2 cut(s)	272, 1346
BslFI	GGGAC	2 cut(s)	690, 1149
BslI	CCNNNNNNNGG	6 cut(s)	250, 367, 872, 875, 1649, 1739
BsmAI	GTCTC	2 cut(s)	13, 671
BsmBI	CGTCTC	1 cut(s)	13
BsmFI	GGGAC	2 cut(s)	690, 1149
BsnI	GGCC	6 cut(s)	5, 453, 603, 1345, 1629, 1721
Bsp1286I	GDGCHC	5 cut(s)	38, 134, 519, 1234, 1551
Bsp1407I	TGTACA	1 cut(s)	136
Bsp1720I	GCTNAGC	1 cut(s)	513
Bsp19I	CCATGG	1 cut(s)	488
BspANI	GGCC	6 cut(s)	5, 453, 603, 1345, 1629, 1721
BspCNI	CTCAG	3 cut(s)	388, 505, 696
BspHI	TCATGA	2 cut(s)	457, 1180
BspLI	GGNNCC	9 cut(s)	298, 706, 727, 736, 953, 1156, 1432, 1491, 1512
BspMAI	CTGCAG	1 cut(s)	67
BspMI	ACCTGC	1 cut(s)	1119
BspPI	GGATC	7 cut(s)	729, 742, 935, 1103, 1484, 1497, 1724
BspT107I	GGYRCC	1 cut(s)	1154
BsrDI	GCAATG	3 cut(s)	154, 328, 1440
BsrGI	TGTACA	1 cut(s)	136
BsrI	ACTGG	6 cut(s)	45, 450, 821, 1158, 1565, 1666
BssECI	CCNNGG	5 cut(s)	31, 437, 488, 1068, 1514
BssT1I	CCWWGG	1 cut(s)	488
Bst2UI	CCWGG	4 cut(s)	32, 438, 1296, 1508
Bst4CI	ACNGT	6 cut(s)	179, 202, 1213, 1312, 1518, 1570
Bst6I	CTCTTC	1 cut(s)	1504
BstAUI	TGTACA	1 cut(s)	136
BstC8I	GCNNGC	4 cut(s)	369, 451, 510, 1329
BstDEI	CTNAG	3 cut(s)	375, 513, 683
BstDSI	CCRYGG	2 cut(s)	488, 1514
BstEII	GGTNACC	1 cut(s)	1007
BstENI	CCTNNNNNAGG	1 cut(s)	873
BstF5I	GGATG	3 cut(s)	1002, 1285, 1399
BstH2I	RGCGCY	3 cut(s)	368, 420, 1328
BstHHI	GCGC	3 cut(s)	367, 419, 1327
BstMAI	GTCTC	2 cut(s)	13, 671
BstMWI	GCNNNNNNNGC	6 cut(s)	313, 395, 505, 514, 1451, 1655
BstNI	CCWGG	4 cut(s)	32, 438, 1296, 1508
BstNSI	RCATGY	4 cut(s)	385, 562, 657, 983
BstPAI	GACNNNNGTC	1 cut(s)	1360
BstPI	GGTNACC	1 cut(s)	1007
BstSCI	CCNGG	5 cut(s)	30, 436, 1294, 1345, 1506
BstSFI	CTRYAG	2 cut(s)	63, 426
BstSLI	GKGCMC	3 cut(s)	38, 1234, 1551
BstV1I	GCAGC	3 cut(s)	215, 376, 1432
BstX2I	RGATCY	2 cut(s)	734, 1489
BstXI	CCANNNNNNTGG	1 cut(s)	1124
BstYI	RGATCY	2 cut(s)	734, 1489
BsuI	GTATCC	1 cut(s)	1545
BsuRI	GGCC	6 cut(s)	5, 453, 603, 1345, 1629, 1721
BtgI	CCRYGG	2 cut(s)	488, 1514
BtsCI	GGATG	3 cut(s)	1002, 1285, 1399
BtsIMutI	CAGTG	1 cut(s)	198
BveI	ACCTGC	1 cut(s)	1119
Cac8I	GCNNGC	4 cut(s)	369, 451, 510, 1329
CciI	TCATGA	2 cut(s)	457, 1180
CfoI	GCGC	3 cut(s)	367, 419, 1327
Cfr13I	GGNCC	5 cut(s)	601, 704, 878, 952, 1459
Csp6I	GTAC	3 cut(s)	137, 183, 1251
CviQI	GTAC	3 cut(s)	137, 183, 1251
DdeI	CTNAG	3 cut(s)	375, 513, 683
EaeI	YGGCCR	2 cut(s)	3, 1719
Eam1104I	CTCTTC	1 cut(s)	1504
EarI	CTCTTC	1 cut(s)	1504
Ecl136II	GAGCTC	1 cut(s)	132
Eco130I	CCWWGG	1 cut(s)	488
Eco147I	AGGCCT	1 cut(s)	453
Eco24I	GRGCYC	1 cut(s)	134
Eco47I	GGWCC	4 cut(s)	704, 878, 952, 1459
Eco47III	AGCGCT	1 cut(s)	366
Eco53kI	GAGCTC	1 cut(s)	132
Eco57I	CTGAAG	1 cut(s)	1409
Eco91I	GGTNACC	1 cut(s)	1007
EcoICRI	GAGCTC	1 cut(s)	132
EcoNI	CCTNNNNNAGG	1 cut(s)	873
EcoO109I	RGGNCCY	3 cut(s)	601, 878, 1459
EcoO65I	GGTNACC	1 cut(s)	1007
EcoRI	GAATTC	1 cut(s)	1216
EcoRII	CCWGG	4 cut(s)	30, 436, 1294, 1506
EcoT14I	CCWWGG	1 cut(s)	488
EcoT38I	GRGCYC	1 cut(s)	134
ErhI	CCWWGG	1 cut(s)	488
Esp3I	CGTCTC	1 cut(s)	13
FaqI	GGGAC	2 cut(s)	690, 1149
FauNDI	CATATG	1 cut(s)	40
FbaI	TGATCA	3 cut(s)	1147, 1437, 1579
Fnu4HI	GCNGC	3 cut(s)	229, 390, 1446
FokI	GGATG	3 cut(s)	1009, 1292, 1406
FriOI	GRGCYC	1 cut(s)	134
Fsp4HI	GCNGC	3 cut(s)	229, 390, 1446
FspBI	CTAG	4 cut(s)	570, 854, 1040, 1762
GlaI	GCGC	3 cut(s)	366, 418, 1326
GluI	GCNGC	3 cut(s)	229, 390, 1446
GsaI	CCCAGC	2 cut(s)	365, 1116
GsuI	CTGGAG	3 cut(s)	786, 894, 951
HaeII	RGCGCY	3 cut(s)	368, 420, 1328
HaeIII	GGCC	6 cut(s)	5, 453, 603, 1345, 1629, 1721
HapII	CCGG	2 cut(s)	272, 1346
HhaI	GCGC	3 cut(s)	367, 419, 1327
Hin6I	GCGC	3 cut(s)	365, 417, 1325
HinP1I	GCGC	3 cut(s)	365, 417, 1325
HindIII	AAGCTT	1 cut(s)	462
HinfI	GANTC	6 cut(s)	268, 433, 578, 968, 1000, 1747
HpaII	CCGG	2 cut(s)	272, 1346
HphI	GGTGA	7 cut(s)	3, 43, 173, 277, 537, 1019, 1589
Hpy166II	GTNNAC	3 cut(s)	28, 1232, 1549
Hpy188I	TCNGA	3 cut(s)	378, 686, 940
Hpy188III	TCNNGA	7 cut(s)	458, 582, 873, 930, 1181, 1606, 1709
Hpy8I	GTNNAC	3 cut(s)	28, 1232, 1549
HpyAV	CCTTC	9 cut(s)	217, 310, 322, 464, 474, 614, 724, 879, 1384
HpyCH4III	ACNGT	6 cut(s)	179, 202, 1213, 1312, 1518, 1570
HpyCH4IV	ACGT	1 cut(s)	105
HpyCH4V	TGCA	9 cut(s)	65, 147, 562, 793, 1232, 1421, 1448, 1478, 1549
HpyF10VI	GCNNNNNNNGC	6 cut(s)	313, 395, 505, 514, 1451, 1655
HpyF3I	CTNAG	3 cut(s)	375, 513, 683
HpySE526I	ACGT	1 cut(s)	105
HspAI	GCGC	3 cut(s)	365, 417, 1325
Ksp22I	TGATCA	3 cut(s)	1147, 1437, 1579
LmnI	GCTCC	3 cut(s)	296, 1516, 1655
Lsp1109I	GCAGC	3 cut(s)	215, 376, 1432
LweI	GCATC	1 cut(s)	284
MaeI	CTAG	4 cut(s)	570, 854, 1040, 1762
MaeII	ACGT	1 cut(s)	105
MaeIII	GTNAC	7 cut(s)	161, 202, 649, 659, 811, 1007, 1027
MboII	GAAGA	2 cut(s)	1491, 1702
MflI	RGATCY	2 cut(s)	734, 1489
MhlI	GDGCHC	5 cut(s)	38, 134, 519, 1234, 1551
MluCI	AATT	5 cut(s)	585, 740, 1061, 1216, 1333
MlyI	GAGTC	2 cut(s)	277, 977
MroXI	GAANNNNTTC	2 cut(s)	925, 1303
MseI	TTAA	6 cut(s)	537, 807, 1023, 1076, 1404, 1466
MslI	CAYNNNNRTG	4 cut(s)	563, 1122, 1199, 1211
MspA1I	CMGCKG	1 cut(s)	1531
MspI	CCGG	2 cut(s)	272, 1346
MspR9I	CCNGG	5 cut(s)	32, 438, 1296, 1347, 1508
MvaI	CCWGG	4 cut(s)	32, 438, 1296, 1508
MwoI	GCNNNNNNNGC	6 cut(s)	313, 395, 505, 514, 1451, 1655
NciI	CCSGG	1 cut(s)	1347
NcoI	CCATGG	1 cut(s)	488
NdeI	CATATG	1 cut(s)	40
NlaIV	GGNNCC	9 cut(s)	298, 706, 727, 736, 953, 1156, 1432, 1491, 1512
NmeAIII	GCCGAG	2 cut(s)	153, 1093
NmuCI	GTSAC	4 cut(s)	161, 811, 1007, 1027
NspI	RCATGY	4 cut(s)	385, 562, 657, 983
OliI	CACNNNNGTG	1 cut(s)	1211
PagI	TCATGA	2 cut(s)	457, 1180
PaqCI	CACCTGC	1 cut(s)	1119
PceI	AGGCCT	1 cut(s)	453
PciI	ACATGT	1 cut(s)	381
PdmI	GAANNNNTTC	2 cut(s)	925, 1303
PfeI	GAWTC	4 cut(s)	433, 578, 1000, 1747
PkrI	GCNGC	3 cut(s)	230, 391, 1447
PleI	GAGTC	2 cut(s)	276, 976
PpsI	GAGTC	2 cut(s)	276, 976
PpuMI	RGGWCCY	2 cut(s)	878, 1459
PscI	ACATGT	1 cut(s)	381
PshAI	GACNNNNGTC	1 cut(s)	1360
PsiI	TTATAA	2 cut(s)	77, 801
Psp124BI	GAGCTC	1 cut(s)	134
Psp5II	RGGWCCY	2 cut(s)	878, 1459
Psp6I	CCWGG	4 cut(s)	30, 436, 1294, 1506
PspEI	GGTNACC	1 cut(s)	1007
PspFI	CCCAGC	2 cut(s)	361, 1112
PspGI	CCWGG	4 cut(s)	30, 436, 1294, 1506
PspN4I	GGNNCC	9 cut(s)	298, 706, 727, 736, 953, 1156, 1432, 1491, 1512
PspPI	GGNCC	5 cut(s)	601, 704, 878, 952, 1459
PspPPI	RGGWCCY	2 cut(s)	878, 1459
PstI	CTGCAG	1 cut(s)	67
PsuI	RGATCY	2 cut(s)	734, 1489
PvuII	CAGCTG	1 cut(s)	1531
RsaI	GTAC	3 cut(s)	138, 184, 1252
RsaNI	GTAC	3 cut(s)	137, 183, 1251
RseI	CAYNNNNRTG	4 cut(s)	563, 1122, 1199, 1211
SacI	GAGCTC	1 cut(s)	134
SaqAI	TTAA	6 cut(s)	537, 807, 1023, 1076, 1404, 1466
SatI	GCNGC	3 cut(s)	229, 390, 1446
Sau96I	GGNCC	5 cut(s)	601, 704, 878, 952, 1459
SchI	GAGTC	2 cut(s)	277, 977
ScrFI	CCNGG	5 cut(s)	32, 438, 1296, 1347, 1508
SduI	GDGCHC	5 cut(s)	38, 134, 519, 1234, 1551
SfaNI	GCATC	1 cut(s)	284
SfcI	CTRYAG	2 cut(s)	63, 426
SinI	GGWCC	4 cut(s)	704, 878, 952, 1459
SmiMI	CAYNNNNRTG	4 cut(s)	563, 1122, 1199, 1211
SmlI	CTYRAG	1 cut(s)	1637
SmoI	CTYRAG	1 cut(s)	1637
Sse9I	AATT	5 cut(s)	585, 740, 1061, 1216, 1333
SseBI	AGGCCT	1 cut(s)	453
SspI	AATATT	2 cut(s)	81, 925
SspMI	CTAG	4 cut(s)	570, 854, 1040, 1762
SstI	GAGCTC	1 cut(s)	134
StuI	AGGCCT	1 cut(s)	453
StyD4I	CCNGG	5 cut(s)	30, 436, 1294, 1345, 1506
StyI	CCWWGG	1 cut(s)	488
TaaI	ACNGT	6 cut(s)	179, 202, 1213, 1312, 1518, 1570
TaiI	ACGT	1 cut(s)	108
TaqI	TCGA	1 cut(s)	958
TasI	AATT	5 cut(s)	585, 740, 1061, 1216, 1333
TatI	WGTACW	3 cut(s)	136, 182, 1250
TfiI	GAWTC	4 cut(s)	433, 578, 1000, 1747
Tru1I	TTAA	6 cut(s)	537, 807, 1023, 1076, 1404, 1466
Tru9I	TTAA	6 cut(s)	537, 807, 1023, 1076, 1404, 1466
TscAI	CASTG	1 cut(s)	205
TseFI	GTSAC	4 cut(s)	161, 811, 1007, 1027
TseI	GCWGC	3 cut(s)	228, 389, 1445
Tsp45I	GTSAC	4 cut(s)	161, 811, 1007, 1027
TspDTI	ATGAA	8 cut(s)	292, 446, 474, 733, 797, 1013, 1209, 1287
TspRI	CASTG	1 cut(s)	205
VneI	GTGCAC	2 cut(s)	1230, 1547
VpaK11BI	GGWCC	4 cut(s)	704, 878, 952, 1459
XagI	CCTNNNNNAGG	1 cut(s)	873
XapI	RAATTY	4 cut(s)	585, 740, 1061, 1216
XceI	RCATGY	4 cut(s)	385, 562, 657, 983
XcmI	CCANNNNNNNNNTGG	1 cut(s)	231
XmnI	GAANNNNTTC	2 cut(s)	925, 1303
XspI	CTAG	4 cut(s)	570, 854, 1040, 1762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.