FvH4_1g21940

Gamma-glutamyltranspeptidase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
13865620 .. 13869016
3397 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g21940.t1

Sequence Viewer

Length: 1746 bp
ATGGCAATGATAGATATGGTGCAGATTTTGCTTACCATCATACTTCTCTTTCTCTCACTGTTACCTTTTTCTGCGAGCCTCCATGCTGCCAGTGGTTCAACCAAAAGCAGGCCGGAGGTAATTTATGCTCGACATGGTGCTGTTGCAACTGATGATGGCCGATGTTCCAAAATTGGGATGACTGTTCTTCGAGAAGGAGGACACACTGTCGATGCATCTGTAGCTGCTGCTTTGTGCTTAGGAGTGGTGAGTCCGGCGTCAAGTGGCATTGGTGGGGGAGCCTTCATGCTTATTAGGCAAGGCAATGGGAAGGCACAGGCCTTTGATATGAGAGAAACCGCCCCCGCGCTAGCTTCTCAGAATATGTATGCTGCCAATGCTACTTTGAAAAGTAAAGGCGCTCTCTCTGTAGCAATTCCAGGGGAACTGGCAGGCCTTCATGAAGCTTGGAAACAACACGGAAAGCTTCCATGGGAAAGGCTTGTAAATCCTGCTGAGCGCCTTGCTCGTTTGGGATTTAAGATTTCACCCTACCTCAACATGCAAATGACTAAAACAGAATCAGGAATCTTGGCAGATGAGGGCCTTCGTCATATATTTACATCAAATGGAAAGCTCTTGCAGCCAGGTGTAATGTGCCGTAACAAGAAACTGGCAAAGACGCTGAGACAAATCTCAAAGCTTGGTCCTGTAGCCTTCTATAATGGTTCTGTTGGATCCAAATTCGTTAGAGATGTTCGGAAGGCTGGAGGAATACTTACAATGAATGATTTGCGAAGTTATAGAGTTAAAGTGACAAAGCCGTTATCTATTCATACTCTAGGACATAAAATACTAGCTATGCCTCCACCATCTGGAGGTCCTCCTTTGATACTTATGCTAAACATTCTTTCCAACTATGGAAATATTTCTGGAGTTTCTGATCCTCTTTGGGTCCATCGAGAGATTGAAACCTTGAAGAATGTGTTTGCCGTGAGGATGAATCTTGGTGACCCTGACTTTGTTAATGTGACTAAAGTTCTAGCTGATATGCTATCTCCTAAATTTGCCAAGGAGTTGAAGAAAACCATACTCGACAACATGACATTTGATCCCAGTCATTACGGTGGCAGATGGAAACAGATCAATGATCATGGCACCAGTCATTTGTCCATAGTAGATCATGAGCAAAATGCCATCTCCATGACCTCTACTGTGAACGCGTACTTTGGTGCACAAATGCTGTCATCGAGTACAGGAATAGTCCTAAACAATGAAATGGATGATTTCTCCATACCTGGAAATGTTTCAACTGGTCCACCACCAGCGCTAGCCAATTTTATCAGGCCAGGAAAAAGACCATTGTCGTCCATGACACCTACCATAATCCTGAAGGATGAGCAACTTAAAGCAGTTGTAGGTGCAAGTGGAGGAGCCATGATCATTCCTGCAACAGCAGAGGTACTCTTAAATCATTTTGCAAGGGGAATGGATCCACTATCTTCTGTCCTGGCTCCACGGTTTTATCATCAGCTGTATCCTAATGTGGTGCACTATGAAAATTGGACAACCGTGATAGGTGATCACTTTGAACTTCCTGCTCAAATCAGGAAATCCCTACAAAAGAAAGGTCATGTCCTTGAGCCTCTTGCTGGTGGAGCTATTTGCCAGTTTATAGTTATAGAAGCTTTGAAGAAAAATGGAGGTAGTCAAGAGTTTGTGGCAGTGAGTGATCCAAGAAAAGGAGGGATTCCTGCTGGCTTCTAG

Protein Analysis

582

Amino Acids

62.56

Weight (kDa)

9.58

Isoelectric Point (pI)

35.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G_glu_transpept PF01019 61 - 576 6.9e-171 Gamma-glutamyltranspeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011090)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1136
AccB7I CCANNNNNTGG 1 cut(s) 854
AccII CGCG 2 cut(s) 347, 1202
AciI CCGC 2 cut(s) 339, 345
AclWI GGATC 7 cut(s) 711, 724, 917, 1085, 1466, 1479, 1706
AcoI YGGCCR 1 cut(s) 157
AcsI RAATTY 2 cut(s) 722, 1043
AcuI CTGAAG 1 cut(s) 1391
AcyI GRCGYC 1 cut(s) 257
AfaI GTAC 3 cut(s) 1205, 1234, 1443
AfeI AGCGCT 1 cut(s) 1308
AfiI CCNNNNNNNGG 6 cut(s) 108, 174, 854, 857, 1631, 1721
AflIII ACRYGT 1 cut(s) 1200
AgsI TTSAA 8 cut(s) 99, 388, 950, 958, 1060, 1290, 1571, 1672
AhdI GACNNNNNGTC 1 cut(s) 206
AjnI CCWGG 5 cut(s) 418, 625, 1276, 1327, 1488
Alw21I GWGCWC 2 cut(s) 1216, 1533
Alw26I GTCTC 1 cut(s) 661
Alw44I GTGCAC 2 cut(s) 1212, 1529
AlwI GGATC 7 cut(s) 711, 724, 917, 1085, 1466, 1479, 1706
Aor51HI AGCGCT 1 cut(s) 1308
AoxI GGCC 6 cut(s) 110, 157, 318, 433, 583, 1325
ApaLI GTGCAC 2 cut(s) 1212, 1529
ApeKI GCWGC 5 cut(s) 86, 224, 227, 371, 622
ApoI RAATTY 2 cut(s) 722, 1043
ArsI GACNNNNNNTTYG 4 cut(s) 983, 1015, 1594, 1626
Asp700I GAANNNNTTC 2 cut(s) 907, 1285
AspLEI GCGC 4 cut(s) 349, 401, 501, 1309
AspS9I GGNCC 5 cut(s) 583, 686, 860, 934, 1295
AsuHPI GGTGA 4 cut(s) 259, 519, 1001, 1571
AsuNHI GCTAGC 2 cut(s) 349, 1309
AvaII GGWCC 4 cut(s) 686, 860, 934, 1295
BaeGI GKGCMC 2 cut(s) 1216, 1533
BamHI GGATCC 2 cut(s) 716, 1471
BanI GGYRCC 1 cut(s) 1136
Bbv12I GWGCWC 2 cut(s) 1216, 1533
BbvI GCAGC 5 cut(s) 73, 211, 214, 358, 634
BccI CCATC 6 cut(s) 44, 149, 859, 945, 1107, 1184
BceAI ACGGC 3 cut(s) 624, 787, 956
BciT130I CCWGG 5 cut(s) 420, 627, 1278, 1329, 1490
BciVI GTATCC 1 cut(s) 1527
BclI TGATCA 3 cut(s) 1129, 1419, 1561
BcoDI GTCTC 1 cut(s) 661
BfaI CTAG 6 cut(s) 350, 821, 836, 1022, 1310, 1744
BfmI CTRYAG 3 cut(s) 219, 408, 690
BfoI RGCGCY 3 cut(s) 402, 502, 1310
BfuI GTATCC 1 cut(s) 1527
BisI GCNGC 5 cut(s) 87, 225, 228, 372, 623
BlpI GCTNAGC 1 cut(s) 495
BlsI GCNGC 5 cut(s) 88, 226, 229, 373, 624
Bme1390I CCNGG 5 cut(s) 420, 627, 1278, 1329, 1490
Bme18I GGWCC 4 cut(s) 686, 860, 934, 1295
BmeRI GACNNNNNGTC 1 cut(s) 206
BmgT120I GGNCC 5 cut(s) 583, 686, 860, 934, 1295
BmiI GGNNCC 7 cut(s) 280, 718, 935, 1138, 1414, 1473, 1494
BmrFI CCNGG 5 cut(s) 420, 627, 1278, 1329, 1490
BmrI ACTGGG 1 cut(s) 1089
BmsI GCATC 2 cut(s) 202, 224
BmtI GCTAGC 2 cut(s) 353, 1313
BmuI ACTGGG 1 cut(s) 1089
BoxI GACNNNNGTC 1 cut(s) 1342
BpmI CTGGAG 3 cut(s) 768, 876, 933
Bpu10I CCTNAGC 1 cut(s) 238
Bpu1102I GCTNAGC 1 cut(s) 495
BpuEI CTTGAG 1 cut(s) 1640
BsaHI GRCGYC 1 cut(s) 257
BsaJI CCNNGG 4 cut(s) 419, 470, 1050, 1496
Bsc4I CCNNNNNNNGG 6 cut(s) 108, 174, 854, 857, 1631, 1721
Bse1I ACTGG 7 cut(s) 90, 432, 657, 1095, 1140, 1297, 1648
Bse3DI GCAATG 2 cut(s) 12, 310
BseBI CCWGG 5 cut(s) 420, 627, 1278, 1329, 1490
BseDI CCNNGG 4 cut(s) 419, 470, 1050, 1496
BseGI GGATG 4 cut(s) 183, 984, 1267, 1381
BseLI CCNNNNNNNGG 6 cut(s) 108, 174, 854, 857, 1631, 1721
BseMI GCAATG 2 cut(s) 12, 310
BseMII CTCAG 3 cut(s) 371, 486, 656
BseNI ACTGG 7 cut(s) 90, 432, 657, 1095, 1140, 1297, 1648
BseRI GAGGAG 1 cut(s) 1425
BseSI GKGCMC 2 cut(s) 1216, 1533
BseXI GCAGC 5 cut(s) 73, 211, 214, 358, 634
BsgI GTGCAG 1 cut(s) 41
Bsh1236I CGCG 2 cut(s) 347, 1202
BshFI GGCC 6 cut(s) 112, 159, 320, 435, 585, 1327
BshNI GGYRCC 1 cut(s) 1136
BsiHKAI GWGCWC 2 cut(s) 1216, 1533
BsiSI CCGG 2 cut(s) 113, 254
BslI CCNNNNNNNGG 6 cut(s) 108, 174, 854, 857, 1631, 1721
BsmAI GTCTC 1 cut(s) 661
BsnI GGCC 6 cut(s) 112, 159, 320, 435, 585, 1327
Bsp1286I GDGCHC 2 cut(s) 1216, 1533
Bsp1720I GCTNAGC 1 cut(s) 495
Bsp19I CCATGG 1 cut(s) 470
BspACI CCGC 2 cut(s) 339, 345
BspANI GGCC 6 cut(s) 112, 159, 320, 435, 585, 1327
BspCNI CTCAG 3 cut(s) 370, 487, 657
BspFNI CGCG 2 cut(s) 347, 1202
BspHI TCATGA 2 cut(s) 439, 1162
BspLI GGNNCC 7 cut(s) 280, 718, 935, 1138, 1414, 1473, 1494
BspOI GCTAGC 2 cut(s) 353, 1313
BspPI GGATC 7 cut(s) 711, 724, 917, 1085, 1466, 1479, 1706
BspT107I GGYRCC 1 cut(s) 1136
BsrDI GCAATG 2 cut(s) 12, 310
BsrI ACTGG 7 cut(s) 90, 432, 657, 1095, 1140, 1297, 1648
BssECI CCNNGG 4 cut(s) 419, 470, 1050, 1496
BssNI GRCGYC 1 cut(s) 257
BssT1I CCWWGG 2 cut(s) 470, 1050
Bst2UI CCWGG 5 cut(s) 420, 627, 1278, 1329, 1490
Bst4CI ACNGT 7 cut(s) 60, 184, 208, 1106, 1195, 1500, 1552
BstACI GRCGYC 1 cut(s) 257
BstAPI GCANNNNNTGC 1 cut(s) 28
BstC8I GCNNGC 6 cut(s) 76, 110, 351, 433, 1311, 1738
BstDEI CTNAG 4 cut(s) 238, 357, 495, 665
BstDSI CCRYGG 2 cut(s) 470, 1496
BstEII GGTNACC 1 cut(s) 989
BstF5I GGATG 4 cut(s) 183, 984, 1267, 1381
BstFNI CGCG 2 cut(s) 347, 1202
BstH2I RGCGCY 3 cut(s) 402, 502, 1310
BstHHI GCGC 4 cut(s) 349, 401, 501, 1309
BstMAI GTCTC 1 cut(s) 661
BstMWI GCNNNNNNNGC 6 cut(s) 28, 221, 295, 377, 622, 1637
BstNI CCWGG 5 cut(s) 420, 627, 1278, 1329, 1490
BstNSI RCATGY 1 cut(s) 544
BstPAI GACNNNNGTC 1 cut(s) 1342
BstPI GGTNACC 1 cut(s) 989
BstSCI CCNGG 5 cut(s) 418, 625, 1276, 1327, 1488
BstSFI CTRYAG 3 cut(s) 219, 408, 690
BstSLI GKGCMC 2 cut(s) 1216, 1533
BstUI CGCG 2 cut(s) 347, 1202
BstV1I GCAGC 5 cut(s) 73, 211, 214, 358, 634
BstX2I RGATCY 2 cut(s) 716, 1471
BstYI RGATCY 2 cut(s) 716, 1471
BsuI GTATCC 1 cut(s) 1527
BsuRI GGCC 6 cut(s) 112, 159, 320, 435, 585, 1327
BtgI CCRYGG 2 cut(s) 470, 1496
BtsCI GGATG 4 cut(s) 183, 984, 1267, 1381
BtsI GCAGTG 1 cut(s) 1710
BtsIMutI CAGTG 4 cut(s) 56, 97, 204, 1710
Cac8I GCNNGC 6 cut(s) 76, 110, 351, 433, 1311, 1738
CciI TCATGA 2 cut(s) 439, 1162
CfoI GCGC 4 cut(s) 349, 401, 501, 1309
Cfr13I GGNCC 5 cut(s) 583, 686, 860, 934, 1295
CseI GACGC 2 cut(s) 246, 670
Csp6I GTAC 3 cut(s) 1204, 1233, 1442
CviQI GTAC 3 cut(s) 1204, 1233, 1442
DdeI CTNAG 4 cut(s) 238, 357, 495, 665
DriI GACNNNNNGTC 1 cut(s) 206
EaeI YGGCCR 1 cut(s) 157
Eam1105I GACNNNNNGTC 1 cut(s) 206
Eco130I CCWWGG 2 cut(s) 470, 1050
Eco147I AGGCCT 2 cut(s) 320, 435
Eco47I GGWCC 4 cut(s) 686, 860, 934, 1295
Eco47III AGCGCT 1 cut(s) 1308
Eco57I CTGAAG 1 cut(s) 1391
Eco91I GGTNACC 1 cut(s) 989
EcoO109I RGGNCCY 2 cut(s) 583, 860
EcoO65I GGTNACC 1 cut(s) 989
EcoRII CCWGG 5 cut(s) 418, 625, 1276, 1327, 1488
EcoT14I CCWWGG 2 cut(s) 470, 1050
EcoT22I ATGCAT 1 cut(s) 217
ErhI CCWWGG 2 cut(s) 470, 1050
FauI CCCGC 1 cut(s) 352
FbaI TGATCA 3 cut(s) 1129, 1419, 1561
Fnu4HI GCNGC 5 cut(s) 87, 225, 228, 372, 623
FokI GGATG 4 cut(s) 190, 991, 1274, 1388
Fsp4HI GCNGC 5 cut(s) 87, 225, 228, 372, 623
FspBI CTAG 6 cut(s) 350, 821, 836, 1022, 1310, 1744
GlaI GCGC 4 cut(s) 348, 400, 500, 1308
GluI GCNGC 5 cut(s) 87, 225, 228, 372, 623
GsuI CTGGAG 3 cut(s) 768, 876, 933
HaeII RGCGCY 3 cut(s) 402, 502, 1310
HaeIII GGCC 6 cut(s) 112, 159, 320, 435, 585, 1327
HapII CCGG 2 cut(s) 113, 254
HgaI GACGC 2 cut(s) 246, 670
HhaI GCGC 4 cut(s) 349, 401, 501, 1309
Hin1I GRCGYC 1 cut(s) 257
Hin6I GCGC 4 cut(s) 347, 399, 499, 1307
HinP1I GCGC 4 cut(s) 347, 399, 499, 1307
HindIII AAGCTT 4 cut(s) 444, 464, 680, 1665
HinfI GANTC 5 cut(s) 250, 560, 567, 982, 1729
HpaII CCGG 2 cut(s) 113, 254
HphI GGTGA 4 cut(s) 259, 519, 1001, 1571
Hpy166II GTNNAC 4 cut(s) 1198, 1214, 1298, 1531
Hpy188I TCNGA 3 cut(s) 360, 741, 922
Hpy8I GTNNAC 4 cut(s) 1198, 1214, 1298, 1531
HpyAV CCTTC 8 cut(s) 188, 292, 304, 446, 596, 706, 736, 1366
HpyCH4III ACNGT 7 cut(s) 60, 184, 208, 1106, 1195, 1500, 1552
HpyF10VI GCNNNNNNNGC 6 cut(s) 28, 221, 295, 377, 622, 1637
HpyF3I CTNAG 4 cut(s) 238, 357, 495, 665
Hsp92I GRCGYC 1 cut(s) 257
HspAI GCGC 4 cut(s) 347, 399, 499, 1307
Ksp22I TGATCA 3 cut(s) 1129, 1419, 1561
LmnI GCTCC 4 cut(s) 278, 1412, 1498, 1637
Lsp1109I GCAGC 5 cut(s) 73, 211, 214, 358, 634
LweI GCATC 2 cut(s) 202, 224
MaeI CTAG 6 cut(s) 350, 821, 836, 1022, 1310, 1744
MaeIII GTNAC 5 cut(s) 60, 641, 793, 989, 1009
MboII GAAGA 5 cut(s) 179, 970, 1072, 1473, 1684
MflI RGATCY 2 cut(s) 716, 1471
MhlI GDGCHC 2 cut(s) 1216, 1533
MluCI AATT 7 cut(s) 120, 171, 414, 722, 1043, 1315, 1540
MluI ACGCGT 1 cut(s) 1200
MlyI GAGTC 1 cut(s) 259
MmeI TCCRAC 2 cut(s) 694, 918
Mph1103I ATGCAT 1 cut(s) 217
MroXI GAANNNNTTC 2 cut(s) 907, 1285
MseI TTAA 5 cut(s) 519, 789, 1005, 1386, 1448
MslI CAYNNNNRTG 3 cut(s) 545, 1104, 1181
MspA1I CMGCKG 1 cut(s) 1513
MspI CCGG 2 cut(s) 113, 254
MspR9I CCNGG 5 cut(s) 420, 627, 1278, 1329, 1490
MvaI CCWGG 5 cut(s) 420, 627, 1278, 1329, 1490
MvnI CGCG 2 cut(s) 347, 1202
MwoI GCNNNNNNNGC 6 cut(s) 28, 221, 295, 377, 622, 1637
NcoI CCATGG 1 cut(s) 470
NheI GCTAGC 2 cut(s) 349, 1309
NlaIV GGNNCC 7 cut(s) 280, 718, 935, 1138, 1414, 1473, 1494
NmuCI GTSAC 3 cut(s) 793, 989, 1009
NsiI ATGCAT 1 cut(s) 217
NspI RCATGY 1 cut(s) 544
PagI TCATGA 2 cut(s) 439, 1162
PceI AGGCCT 2 cut(s) 320, 435
PdmI GAANNNNTTC 2 cut(s) 907, 1285
PfeI GAWTC 4 cut(s) 560, 567, 982, 1729
PflMI CCANNNNNTGG 1 cut(s) 854
PkrI GCNGC 5 cut(s) 88, 226, 229, 373, 624
PleI GAGTC 1 cut(s) 258
PpsI GAGTC 1 cut(s) 258
PpuMI RGGWCCY 1 cut(s) 860
PshAI GACNNNNGTC 1 cut(s) 1342
Psp5II RGGWCCY 1 cut(s) 860
Psp6I CCWGG 5 cut(s) 418, 625, 1276, 1327, 1488
PspEI GGTNACC 1 cut(s) 989
PspGI CCWGG 5 cut(s) 418, 625, 1276, 1327, 1488
PspN4I GGNNCC 7 cut(s) 280, 718, 935, 1138, 1414, 1473, 1494
PspPI GGNCC 5 cut(s) 583, 686, 860, 934, 1295
PspPPI RGGWCCY 1 cut(s) 860
PsuI RGATCY 2 cut(s) 716, 1471
PvuII CAGCTG 1 cut(s) 1513
RsaI GTAC 3 cut(s) 1205, 1234, 1443
RsaNI GTAC 3 cut(s) 1204, 1233, 1442
RseI CAYNNNNRTG 3 cut(s) 545, 1104, 1181
SaqAI TTAA 5 cut(s) 519, 789, 1005, 1386, 1448
SatI GCNGC 5 cut(s) 87, 225, 228, 372, 623
Sau96I GGNCC 5 cut(s) 583, 686, 860, 934, 1295
SchI GAGTC 1 cut(s) 259
ScrFI CCNGG 5 cut(s) 420, 627, 1278, 1329, 1490
SduI GDGCHC 2 cut(s) 1216, 1533
SfaNI GCATC 2 cut(s) 202, 224
SfcI CTRYAG 3 cut(s) 219, 408, 690
SinI GGWCC 4 cut(s) 686, 860, 934, 1295
SmiMI CAYNNNNRTG 3 cut(s) 545, 1104, 1181
SmlI CTYRAG 1 cut(s) 1619
SmoI CTYRAG 1 cut(s) 1619
Sse9I AATT 7 cut(s) 120, 171, 414, 722, 1043, 1315, 1540
SseBI AGGCCT 2 cut(s) 320, 435
SsiI CCGC 2 cut(s) 339, 345
SspI AATATT 1 cut(s) 907
SspMI CTAG 6 cut(s) 350, 821, 836, 1022, 1310, 1744
StuI AGGCCT 2 cut(s) 320, 435
StyD4I CCNGG 5 cut(s) 418, 625, 1276, 1327, 1488
StyI CCWWGG 2 cut(s) 470, 1050
TaaI ACNGT 7 cut(s) 60, 184, 208, 1106, 1195, 1500, 1552
TaqI TCGA 6 cut(s) 130, 190, 210, 940, 1074, 1229
TasI AATT 7 cut(s) 120, 171, 414, 722, 1043, 1315, 1540
TatI WGTACW 1 cut(s) 1232
TfiI GAWTC 4 cut(s) 560, 567, 982, 1729
Tru1I TTAA 5 cut(s) 519, 789, 1005, 1386, 1448
Tru9I TTAA 5 cut(s) 519, 789, 1005, 1386, 1448
TscAI CASTG 4 cut(s) 63, 97, 211, 1710
TseFI GTSAC 3 cut(s) 793, 989, 1009
TseI GCWGC 5 cut(s) 86, 224, 227, 371, 622
Tsp45I GTSAC 3 cut(s) 793, 989, 1009
TspDTI ATGAA 8 cut(s) 274, 428, 456, 779, 803, 995, 1269, 1551
TspGWI ACGGA 1 cut(s) 474
TspRI CASTG 4 cut(s) 63, 97, 211, 1710
Van91I CCANNNNNTGG 1 cut(s) 854
VneI GTGCAC 2 cut(s) 1212, 1529
VpaK11BI GGWCC 4 cut(s) 686, 860, 934, 1295
XapI RAATTY 2 cut(s) 722, 1043
XceI RCATGY 1 cut(s) 544
XcmI CCANNNNNNNNNTGG 1 cut(s) 89
XmnI GAANNNNTTC 2 cut(s) 907, 1285
XspI CTAG 6 cut(s) 350, 821, 836, 1022, 1310, 1744
Zsp2I ATGCAT 1 cut(s) 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.