Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015298

Physical Location & Seq

Genomic Coordinates Reverse (-)

27948045 .. 27951668

Gene Structure 3624 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G74340.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 243 bp

ATGGAATTAGCGGATCGAGCAGTCGGGCTTCTACTATCTTCAATCAGCTTGTCCATATTCACGTACTATACTTTTTGGGTCATCATCCTGCCATTTGTAGATAGTGATCACTTCATCCACAAGTACTTCTTACCCCAAGACTATGCCATTCTCGTACCTGTCTTTGCCGGCATAGCTCTTCTCTCTCTCATTTCCGTATTCATCGGCATGGTCATGCTCAAATCCAAAAAGAAGAAGGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006066 GO:0006464 GO:0006486 GO:0006493 GO:0006497 GO:0006505 GO:0006506 GO:0006629 GO:0006643 GO:0006644 GO:0006650 GO:0006661 GO:0006664 GO:0006720 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009247 GO:0009987 GO:0012505 GO:0016020 GO:0016093 GO:0019348 GO:0019538 GO:0019637 GO:0030234 GO:0031501 GO:0031984 GO:0032991 GO:0033185 GO:0034645 GO:0035268 GO:0035269 GO:0036211 GO:0042157 GO:0042158 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046467 GO:0046474 GO:0046486 GO:0046488 GO:0050790 GO:0065007 GO:0065009 GO:0070085 GO:0071704 GO:0090407 GO:0097502 GO:0098772 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1901615 GO:1902494 GO:1903509 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00510 ko00563 ko01100 map00510 map00563 map01100

Pfam Domains

Protein Families

DPM2

Protein Analysis

80

Amino Acids

9.06

Weight (kDa)

9.05

Isoelectric Point (pI)

36.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DPM2	PF07297	4 - 78	6.8e-35	Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0015298)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74340 AT1G74340
malus_domestica	MD06G1025500.v1.1 MD16G1280900.v1.1
prunus_persica	Prupe.5G029600_v2.0.a1
pyrus_communis	pycom06g02060 pycom06g02070
rosa_chinensis	RchiOBHm_Chr7g0211611
rosa_laevigata	RLG00000002991
rosa_multiflora	Rmu_sc0003760.1_g000018 Rmu_sc0004232.1_g000020
rosa_roxburghii	Rroxscaffold_3G00247680
rosa_rugosa	Rorug07G0126300
rosa_samantha	Rh7AG258900 Rh7CG276000
rosa_wichuraiana	Rw7G022130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	11
AclWI	GGATC	1 cut(s)	21
AfaI	GTAC	3 cut(s)	65, 125, 156
AgsI	TTSAA	1 cut(s)	42
AluBI	AGCT	2 cut(s)	48, 176
AluI	AGCT	2 cut(s)	48, 176
AlwI	GGATC	1 cut(s)	21
BclI	TGATCA	1 cut(s)	106
BmcAI	AGTACT	1 cut(s)	125
BsaAI	YACGTR	1 cut(s)	63
BsaBI	GATNNNNATC	1 cut(s)	105
Bse118I	RCCGGY	1 cut(s)	167
Bse8I	GATNNNNATC	1 cut(s)	105
BseGI	GGATG	2 cut(s)	84, 114
BseJI	GATNNNNATC	1 cut(s)	105
BsiSI	CCGG	1 cut(s)	168
Bsp143I	GATC	2 cut(s)	13, 106
BspACI	CCGC	1 cut(s)	11
BspPI	GGATC	1 cut(s)	21
BspQI	GCTCTTC	1 cut(s)	183
BsrFI	RCCGGY	1 cut(s)	167
BssAI	RCCGGY	1 cut(s)	167
BssMI	GATC	2 cut(s)	13, 106
Bst6I	CTCTTC	1 cut(s)	183
BstBAI	YACGTR	1 cut(s)	63
BstC8I	GCNNGC	1 cut(s)	169
BstF5I	GGATG	2 cut(s)	84, 114
BstKTI	GATC	2 cut(s)	16, 109
BstMBI	GATC	2 cut(s)	13, 106
BstMWI	GCNNNNNNNGC	2 cut(s)	17, 173
BtsCI	GGATG	2 cut(s)	84, 114
Cac8I	GCNNGC	1 cut(s)	169
Cfr10I	RCCGGY	1 cut(s)	167
Csp6I	GTAC	3 cut(s)	64, 124, 155
CviAII	CATG	2 cut(s)	208, 214
CviJI	RGCY	4 cut(s)	28, 48, 176, 239
CviKI_1	RGCY	4 cut(s)	28, 48, 176, 239
CviQI	GTAC	3 cut(s)	64, 124, 155
DpnI	GATC	2 cut(s)	15, 108
DpnII	GATC	2 cut(s)	13, 106
Eam1104I	CTCTTC	1 cut(s)	183
EarI	CTCTTC	1 cut(s)	183
FaeI	CATG	2 cut(s)	211, 217
FaiI	YATR	6 cut(s)	56, 69, 144, 173, 209, 215
FalI	AAGNNNNNCTT	2 cut(s)	113, 145
FatI	CATG	2 cut(s)	207, 213
FbaI	TGATCA	1 cut(s)	106
FokI	GGATG	2 cut(s)	71, 101
HapII	CCGG	1 cut(s)	168
Hin1II	CATG	2 cut(s)	211, 217
HpaII	CCGG	1 cut(s)	168
HpyAV	CCTTC	1 cut(s)	229
HpyCH4IV	ACGT	1 cut(s)	62
HpyF10VI	GCNNNNNNNGC	2 cut(s)	17, 173
HpySE526I	ACGT	1 cut(s)	62
Hsp92II	CATG	2 cut(s)	211, 217
KroI	GCCGGC	1 cut(s)	167
KroNI	GCCGGC	1 cut(s)	169
Ksp22I	TGATCA	1 cut(s)	106
Kzo9I	GATC	2 cut(s)	13, 106
LguI	GCTCTTC	1 cut(s)	183
LpnPI	CCDG	3 cut(s)	101, 171, 181
MaeII	ACGT	1 cut(s)	62
MalI	GATC	2 cut(s)	15, 108
MboI	GATC	2 cut(s)	13, 106
MboII	GAAGA	2 cut(s)	30, 170
MluCI	AATT	1 cut(s)	5
MroNI	GCCGGC	1 cut(s)	167
MseI	TTAA	1 cut(s)	241
MslI	CAYNNNNRTG	2 cut(s)	206, 212
MspI	CCGG	1 cut(s)	168
MwoI	GCNNNNNNNGC	2 cut(s)	17, 173
NaeI	GCCGGC	1 cut(s)	169
NdeII	GATC	2 cut(s)	13, 106
NgoMIV	GCCGGC	1 cut(s)	167
NlaIII	CATG	2 cut(s)	211, 217
PciSI	GCTCTTC	1 cut(s)	183
PdiI	GCCGGC	1 cut(s)	169
Ppu21I	YACGTR	1 cut(s)	63
RsaI	GTAC	3 cut(s)	65, 125, 156
RsaNI	GTAC	3 cut(s)	64, 124, 155
RseI	CAYNNNNRTG	2 cut(s)	206, 212
SapI	GCTCTTC	1 cut(s)	183
SaqAI	TTAA	1 cut(s)	241
Sau3AI	GATC	2 cut(s)	13, 106
ScaI	AGTACT	1 cut(s)	125
SetI	ASST	4 cut(s)	50, 65, 160, 178
SmiMI	CAYNNNNRTG	2 cut(s)	206, 212
Sse9I	AATT	1 cut(s)	5
SsiI	CCGC	1 cut(s)	11
TaiI	ACGT	1 cut(s)	65
TaqI	TCGA	1 cut(s)	16
TasI	AATT	1 cut(s)	5
TatI	WGTACW	1 cut(s)	123
Tru1I	TTAA	1 cut(s)	241
Tru9I	TTAA	1 cut(s)	241
TspDTI	ATGAA	2 cut(s)	103, 190
TspGWI	ACGGA	1 cut(s)	184
ZrmI	AGTACT	1 cut(s)	125

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.