Dolichol phosphate-mannose biosynthesis regulatory
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G74340 AT1G74340 |
| malus_domestica | MD06G1025500.v1.1 MD16G1280900.v1.1 |
| prunus_persica | Prupe.5G029600_v2.0.a1 |
| pyrus_communis | pycom06g02060 pycom06g02070 |
| rosa_chinensis | RchiOBHm_Chr7g0211611 |
| rosa_laevigata | RLG00000002991 |
| rosa_multiflora | Rmu_sc0003760.1_g000018 Rmu_sc0004232.1_g000020 |
| rosa_roxburghii | Rroxscaffold_3G00247680 |
| rosa_rugosa | Rorug07G0126300 |
| rosa_samantha | Rh7AG258900 Rh7CG276000 |
| rosa_wichuraiana | Rw7G022130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 4 |
| Acc36I | ACCTGC | 1 cut(s) | 4 |
| AccB1I | GGYRCC | 4 cut(s) | 16, 232, 357, 440 |
| AccI | GTMKAC | 1 cut(s) | 432 |
| AciI | CCGC | 8 cut(s) | 39, 210, 355, 379, 421, 482, 541, 845 |
| AclWI | GGATC | 5 cut(s) | 271, 373, 710, 1126, 1139 |
| AcoI | YGGCCR | 2 cut(s) | 576, 597 |
| AcsI | RAATTY | 1 cut(s) | 529 |
| AcyI | GRCGYC | 2 cut(s) | 233, 358 |
| AfaI | GTAC | 1 cut(s) | 1042 |
| AflIII | ACRYGT | 1 cut(s) | 33 |
| AgeI | ACCGGT | 1 cut(s) | 613 |
| AgsI | TTSAA | 4 cut(s) | 428, 787, 1109, 1147 |
| AjiI | CACGTC | 1 cut(s) | 225 |
| AjnI | CCWGG | 1 cut(s) | 503 |
| AluBI | AGCT | 4 cut(s) | 111, 185, 410, 1063 |
| AluI | AGCT | 4 cut(s) | 111, 185, 410, 1063 |
| Alw21I | GWGCWC | 1 cut(s) | 1065 |
| Alw26I | GTCTC | 3 cut(s) | 661, 708, 810 |
| AlwI | GGATC | 5 cut(s) | 271, 373, 710, 1126, 1139 |
| AoxI | GGCC | 4 cut(s) | 216, 501, 576, 597 |
| ApeKI | GCWGC | 6 cut(s) | 305, 322, 372, 407, 544, 631 |
| ApoI | RAATTY | 1 cut(s) | 529 |
| AsiGI | ACCGGT | 1 cut(s) | 613 |
| AspLEI | GCGC | 3 cut(s) | 192, 235, 360 |
| AspS9I | GGNCC | 1 cut(s) | 195 |
| AsuC2I | CCSGG | 1 cut(s) | 451 |
| AsuHPI | GGTGA | 5 cut(s) | 16, 562, 628, 649, 706 |
| AvaII | GGWCC | 1 cut(s) | 195 |
| BamHI | GGATCC | 1 cut(s) | 1131 |
| BanI | GGYRCC | 4 cut(s) | 16, 232, 357, 440 |
| BanII | GRGCYC | 2 cut(s) | 647, 1065 |
| BbsI | GAAGAC | 1 cut(s) | 731 |
| Bbv12I | GWGCWC | 1 cut(s) | 1065 |
| BbvI | GCAGC | 6 cut(s) | 292, 334, 384, 419, 556, 618 |
| BccI | CCATC | 3 cut(s) | 125, 239, 989 |
| BceAI | ACGGC | 1 cut(s) | 760 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 422, 456 |
| BciT130I | CCWGG | 1 cut(s) | 505 |
| BclI | TGATCA | 1 cut(s) | 940 |
| BcnI | CCSGG | 1 cut(s) | 451 |
| BcoDI | GTCTC | 3 cut(s) | 661, 708, 810 |
| BfaI | CTAG | 2 cut(s) | 21, 105 |
| BfoI | RGCGCY | 2 cut(s) | 236, 361 |
| BfuAI | ACCTGC | 1 cut(s) | 4 |
| Bme1390I | CCNGG | 2 cut(s) | 451, 505 |
| Bme18I | GGWCC | 1 cut(s) | 195 |
| BmgBI | CACGTC | 1 cut(s) | 225 |
| BmgT120I | GGNCC | 1 cut(s) | 195 |
| BmiI | GGNNCC | 6 cut(s) | 18, 234, 359, 442, 646, 1133 |
| BmrFI | CCNGG | 2 cut(s) | 451, 505 |
| BmsI | GCATC | 2 cut(s) | 739, 1072 |
| BpiI | GAAGAC | 1 cut(s) | 731 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 688, 720, 692, 724 |
| BpmI | CTGGAG | 1 cut(s) | 1049 |
| BpuMI | CCSGG | 1 cut(s) | 451 |
| BsaAI | YACGTR | 1 cut(s) | 1088 |
| BsaHI | GRCGYC | 2 cut(s) | 233, 358 |
| BsaJI | CCNNGG | 6 cut(s) | 94, 213, 361, 485, 504, 1180 |
| BsaWI | WCCGGW | 5 cut(s) | 412, 437, 473, 613, 620 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 187, 217 |
| Bse118I | RCCGGY | 6 cut(s) | 235, 271, 547, 568, 613, 634 |
| Bse1I | ACTGG | 1 cut(s) | 1139 |
| BseBI | CCWGG | 1 cut(s) | 505 |
| BseDI | CCNNGG | 6 cut(s) | 94, 213, 361, 485, 504, 1180 |
| BseGI | GGATG | 1 cut(s) | 388 |
| BseMII | CTCAG | 4 cut(s) | 362, 410, 758, 1067 |
| BseNI | ACTGG | 1 cut(s) | 1139 |
| BseXI | GCAGC | 6 cut(s) | 292, 334, 384, 419, 556, 618 |
| BseYI | CCCAGC | 1 cut(s) | 85 |
| BsgI | GTGCAG | 4 cut(s) | 90, 205, 391, 426 |
| Bsh1285I | CGRYCG | 4 cut(s) | 341, 474, 569, 614 |
| BshFI | GGCC | 4 cut(s) | 218, 503, 578, 599 |
| BshNI | GGYRCC | 4 cut(s) | 16, 232, 357, 440 |
| BshTI | ACCGGT | 1 cut(s) | 613 |
| BsiEI | CGRYCG | 4 cut(s) | 341, 474, 569, 614 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1065 |
| BsmAI | GTCTC | 3 cut(s) | 661, 708, 810 |
| BsnI | GGCC | 4 cut(s) | 218, 503, 578, 599 |
| Bsp1286I | GDGCHC | 2 cut(s) | 647, 1065 |
| Bsp143I | GATC | 8 cut(s) | 276, 313, 338, 365, 715, 770, 940, 1131 |
| Bsp19I | CCATGG | 1 cut(s) | 213 |
| BspACI | CCGC | 8 cut(s) | 39, 210, 355, 379, 421, 482, 541, 845 |
| BspANI | GGCC | 4 cut(s) | 218, 503, 578, 599 |
| BspCNI | CTCAG | 4 cut(s) | 361, 409, 759, 1068 |
| BspLI | GGNNCC | 6 cut(s) | 18, 234, 359, 442, 646, 1133 |
| BspMI | ACCTGC | 1 cut(s) | 4 |
| BspPI | GGATC | 5 cut(s) | 271, 373, 710, 1126, 1139 |
| BspT107I | GGYRCC | 4 cut(s) | 16, 232, 357, 440 |
| BsrFI | RCCGGY | 6 cut(s) | 235, 271, 547, 568, 613, 634 |
| BsrI | ACTGG | 1 cut(s) | 1139 |
| BssAI | RCCGGY | 6 cut(s) | 235, 271, 547, 568, 613, 634 |
| BssECI | CCNNGG | 6 cut(s) | 94, 213, 361, 485, 504, 1180 |
| BssMI | GATC | 8 cut(s) | 276, 313, 338, 365, 715, 770, 940, 1131 |
| BssNI | GRCGYC | 2 cut(s) | 233, 358 |
| BssT1I | CCWWGG | 3 cut(s) | 94, 213, 1180 |
| Bst2UI | CCWGG | 1 cut(s) | 505 |
| Bst4CI | ACNGT | 2 cut(s) | 167, 938 |
| Bst6I | CTCTTC | 1 cut(s) | 715 |
| BstACI | GRCGYC | 2 cut(s) | 233, 358 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 77, 464 |
| BstBAI | YACGTR | 1 cut(s) | 1088 |
| BstC8I | GCNNGC | 9 cut(s) | 69, 78, 220, 237, 273, 335, 377, 1003, 1056 |
| BstDEI | CTNAG | 5 cut(s) | 348, 396, 680, 767, 1076 |
| BstDSI | CCRYGG | 2 cut(s) | 213, 361 |
| BstEII | GGTNACC | 1 cut(s) | 616 |
| BstF5I | GGATG | 1 cut(s) | 388 |
| BstH2I | RGCGCY | 2 cut(s) | 236, 361 |
| BstHHI | GCGC | 3 cut(s) | 192, 235, 360 |
| BstKTI | GATC | 8 cut(s) | 279, 316, 341, 368, 718, 773, 943, 1134 |
| BstMAI | GTCTC | 3 cut(s) | 661, 708, 810 |
| BstMBI | GATC | 8 cut(s) | 276, 313, 338, 365, 715, 770, 940, 1131 |
| BstMCI | CGRYCG | 4 cut(s) | 341, 474, 569, 614 |
| BstNI | CCWGG | 1 cut(s) | 505 |
| BstPI | GGTNACC | 1 cut(s) | 616 |
| BstSCI | CCNGG | 2 cut(s) | 449, 503 |
| BstV1I | GCAGC | 6 cut(s) | 292, 334, 384, 419, 556, 618 |
| BstV2I | GAAGAC | 1 cut(s) | 731 |
| BstX2I | RGATCY | 1 cut(s) | 1131 |
| BstYI | RGATCY | 1 cut(s) | 1131 |
| BsuRI | GGCC | 4 cut(s) | 218, 503, 578, 599 |
| BtgI | CCRYGG | 2 cut(s) | 213, 361 |
| BtrI | CACGTC | 1 cut(s) | 225 |
| BtsCI | GGATG | 1 cut(s) | 388 |
| BtsIMutI | CAGTG | 2 cut(s) | 163, 943 |
| BveI | ACCTGC | 1 cut(s) | 4 |
| Cac8I | GCNNGC | 9 cut(s) | 69, 78, 220, 237, 273, 335, 377, 1003, 1056 |
| CfoI | GCGC | 3 cut(s) | 192, 235, 360 |
| Cfr10I | RCCGGY | 6 cut(s) | 235, 271, 547, 568, 613, 634 |
| Cfr13I | GGNCC | 1 cut(s) | 195 |
| Csp6I | GTAC | 1 cut(s) | 1041 |
| CspAI | ACCGGT | 1 cut(s) | 613 |
| CviAII | CATG | 5 cut(s) | 199, 214, 514, 607, 1006 |
| CviQI | GTAC | 1 cut(s) | 1041 |
| DdeI | CTNAG | 5 cut(s) | 348, 396, 680, 767, 1076 |
| DinI | GGCGCC | 2 cut(s) | 234, 359 |
| DpnI | GATC | 8 cut(s) | 278, 315, 340, 367, 717, 772, 942, 1133 |
| DpnII | GATC | 8 cut(s) | 276, 313, 338, 365, 715, 770, 940, 1131 |
| EaeI | YGGCCR | 2 cut(s) | 576, 597 |
| Eam1104I | CTCTTC | 1 cut(s) | 715 |
| EarI | CTCTTC | 1 cut(s) | 715 |
| EciI | GGCGGA | 2 cut(s) | 471, 860 |
| Ecl136II | GAGCTC | 1 cut(s) | 1063 |
| Eco130I | CCWWGG | 3 cut(s) | 94, 213, 1180 |
| Eco24I | GRGCYC | 2 cut(s) | 647, 1065 |
| Eco47I | GGWCC | 1 cut(s) | 195 |
| Eco53kI | GAGCTC | 1 cut(s) | 1063 |
| Eco91I | GGTNACC | 1 cut(s) | 616 |
| EcoICRI | GAGCTC | 1 cut(s) | 1063 |
| EcoO65I | GGTNACC | 1 cut(s) | 616 |
| EcoRII | CCWGG | 1 cut(s) | 503 |
| EcoT14I | CCWWGG | 3 cut(s) | 94, 213, 1180 |
| EcoT38I | GRGCYC | 2 cut(s) | 647, 1065 |
| EgeI | GGCGCC | 2 cut(s) | 234, 359 |
| EheI | GGCGCC | 2 cut(s) | 234, 359 |
| ErhI | CCWWGG | 3 cut(s) | 94, 213, 1180 |
| FaeI | CATG | 5 cut(s) | 202, 217, 517, 610, 1009 |
| FatI | CATG | 5 cut(s) | 198, 213, 513, 606, 1005 |
| FauI | CCCGC | 1 cut(s) | 32 |
| FbaI | TGATCA | 1 cut(s) | 940 |
| FblI | GTMKAC | 1 cut(s) | 432 |
| FokI | GGATG | 1 cut(s) | 375 |
| FriOI | GRGCYC | 2 cut(s) | 647, 1065 |
| FspBI | CTAG | 2 cut(s) | 21, 105 |
| GlaI | GCGC | 3 cut(s) | 191, 234, 359 |
| GsaI | CCCAGC | 1 cut(s) | 89 |
| GsuI | CTGGAG | 1 cut(s) | 1049 |
| HaeII | RGCGCY | 2 cut(s) | 236, 361 |
| HaeIII | GGCC | 4 cut(s) | 218, 503, 578, 599 |
| HhaI | GCGC | 3 cut(s) | 192, 235, 360 |
| Hin1I | GRCGYC | 2 cut(s) | 233, 358 |
| Hin1II | CATG | 5 cut(s) | 202, 217, 517, 610, 1009 |
| Hin6I | GCGC | 3 cut(s) | 190, 233, 358 |
| HinP1I | GCGC | 3 cut(s) | 190, 233, 358 |
| HincII | GTYRAC | 4 cut(s) | 50, 150, 345, 433 |
| HindII | GTYRAC | 4 cut(s) | 50, 150, 345, 433 |
| HpaI | GTTAAC | 1 cut(s) | 150 |
| HphI | GGTGA | 5 cut(s) | 16, 562, 628, 649, 706 |
| Hpy166II | GTNNAC | 5 cut(s) | 50, 150, 345, 433, 934 |
| Hpy188I | TCNGA | 3 cut(s) | 351, 399, 715 |
| Hpy188III | TCNNGA | 3 cut(s) | 1046, 1066, 1129 |
| Hpy8I | GTNNAC | 5 cut(s) | 50, 150, 345, 433, 934 |
| Hpy99I | CGWCG | 5 cut(s) | 229, 232, 314, 472, 1130 |
| HpyAV | CCTTC | 2 cut(s) | 293, 493 |
| HpyCH4III | ACNGT | 2 cut(s) | 167, 938 |
| HpyCH4IV | ACGT | 3 cut(s) | 33, 224, 1087 |
| HpyCH4V | TGCA | 9 cut(s) | 13, 71, 170, 222, 322, 372, 407, 458, 1085 |
| HpyF3I | CTNAG | 5 cut(s) | 348, 396, 680, 767, 1076 |
| HpySE526I | ACGT | 3 cut(s) | 33, 224, 1087 |
| Hsp92I | GRCGYC | 2 cut(s) | 233, 358 |
| Hsp92II | CATG | 5 cut(s) | 202, 217, 517, 610, 1009 |
| HspAI | GCGC | 3 cut(s) | 190, 233, 358 |
| KasI | GGCGCC | 2 cut(s) | 232, 357 |
| KroI | GCCGGC | 2 cut(s) | 235, 271 |
| KroNI | GCCGGC | 2 cut(s) | 237, 273 |
| Ksp22I | TGATCA | 1 cut(s) | 940 |
| KspAI | GTTAAC | 1 cut(s) | 150 |
| Kzo9I | GATC | 8 cut(s) | 276, 313, 338, 365, 715, 770, 940, 1131 |
| LmnI | GCTCC | 3 cut(s) | 415, 650, 1068 |
| Lsp1109I | GCAGC | 6 cut(s) | 292, 334, 384, 419, 556, 618 |
| LweI | GCATC | 2 cut(s) | 739, 1072 |
| MaeI | CTAG | 2 cut(s) | 21, 105 |
| MaeII | ACGT | 3 cut(s) | 33, 224, 1087 |
| MaeIII | GTNAC | 4 cut(s) | 550, 616, 637, 683 |
| MalI | GATC | 8 cut(s) | 278, 315, 340, 367, 717, 772, 942, 1133 |
| MboI | GATC | 8 cut(s) | 276, 313, 338, 365, 715, 770, 940, 1131 |
| MboII | GAAGA | 4 cut(s) | 150, 702, 731, 1121 |
| MflI | RGATCY | 1 cut(s) | 1131 |
| MhlI | GDGCHC | 2 cut(s) | 647, 1065 |
| MluCI | AATT | 3 cut(s) | 250, 529, 664 |
| Mly113I | GGCGCC | 2 cut(s) | 233, 358 |
| MlyI | GAGTC | 4 cut(s) | 409, 428, 455, 710 |
| MmeI | TCCRAC | 4 cut(s) | 230, 416, 838, 1159 |
| MroNI | GCCGGC | 2 cut(s) | 235, 271 |
| MseI | TTAA | 2 cut(s) | 149, 986 |
| MspA1I | CMGCKG | 1 cut(s) | 379 |
| MspR9I | CCNGG | 2 cut(s) | 451, 505 |
| MvaI | CCWGG | 1 cut(s) | 505 |
| NaeI | GCCGGC | 2 cut(s) | 237, 273 |
| NarI | GGCGCC | 2 cut(s) | 233, 358 |
| NciI | CCSGG | 1 cut(s) | 451 |
| NcoI | CCATGG | 1 cut(s) | 213 |
| NdeII | GATC | 8 cut(s) | 276, 313, 338, 365, 715, 770, 940, 1131 |
| NgoMIV | GCCGGC | 2 cut(s) | 235, 271 |
| NlaIII | CATG | 5 cut(s) | 202, 217, 517, 610, 1009 |
| NlaIV | GGNNCC | 6 cut(s) | 18, 234, 359, 442, 646, 1133 |
| NmeAIII | GCCGAG | 2 cut(s) | 469, 510 |
| NmuCI | GTSAC | 3 cut(s) | 550, 616, 637 |
| PaqCI | CACCTGC | 1 cut(s) | 4 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 467 |
| PdiI | GCCGGC | 2 cut(s) | 237, 273 |
| PfeI | GAWTC | 7 cut(s) | 510, 558, 582, 603, 624, 783, 1151 |
| PinAI | ACCGGT | 1 cut(s) | 613 |
| Ple19I | CGATCG | 1 cut(s) | 341 |
| PleI | GAGTC | 4 cut(s) | 408, 428, 454, 709 |
| PluTI | GGCGCC | 2 cut(s) | 236, 361 |
| PpsI | GAGTC | 4 cut(s) | 408, 428, 454, 709 |
| Ppu21I | YACGTR | 1 cut(s) | 1088 |
| Psp124BI | GAGCTC | 1 cut(s) | 1065 |
| Psp6I | CCWGG | 1 cut(s) | 503 |
| PspEI | GGTNACC | 1 cut(s) | 616 |
| PspFI | CCCAGC | 1 cut(s) | 85 |
| PspGI | CCWGG | 1 cut(s) | 503 |
| PspN4I | GGNNCC | 6 cut(s) | 18, 234, 359, 442, 646, 1133 |
| PspPI | GGNCC | 1 cut(s) | 195 |
| PsuI | RGATCY | 1 cut(s) | 1131 |
| PvuI | CGATCG | 1 cut(s) | 341 |
| RsaI | GTAC | 1 cut(s) | 1042 |
| RsaNI | GTAC | 1 cut(s) | 1041 |
| SacI | GAGCTC | 1 cut(s) | 1065 |
| SalI | GTCGAC | 1 cut(s) | 431 |
| SaqAI | TTAA | 2 cut(s) | 149, 986 |
| Sau3AI | GATC | 8 cut(s) | 276, 313, 338, 365, 715, 770, 940, 1131 |
| Sau96I | GGNCC | 1 cut(s) | 195 |
| SchI | GAGTC | 4 cut(s) | 409, 428, 455, 710 |
| ScrFI | CCNGG | 2 cut(s) | 451, 505 |
| SduI | GDGCHC | 2 cut(s) | 647, 1065 |
| SfaNI | GCATC | 2 cut(s) | 739, 1072 |
| SfoI | GGCGCC | 2 cut(s) | 234, 359 |
| SinI | GGWCC | 1 cut(s) | 195 |
| Sse9I | AATT | 3 cut(s) | 250, 529, 664 |
| SsiI | CCGC | 8 cut(s) | 39, 210, 355, 379, 421, 482, 541, 845 |
| SspDI | GGCGCC | 2 cut(s) | 232, 357 |
| SspMI | CTAG | 2 cut(s) | 21, 105 |
| SstI | GAGCTC | 1 cut(s) | 1065 |
| StyD4I | CCNGG | 2 cut(s) | 449, 503 |
| StyI | CCWWGG | 3 cut(s) | 94, 213, 1180 |
| TaaI | ACNGT | 2 cut(s) | 167, 938 |
| TaiI | ACGT | 3 cut(s) | 36, 227, 1090 |
| TaqI | TCGA | 4 cut(s) | 115, 243, 432, 491 |
| TasI | AATT | 3 cut(s) | 250, 529, 664 |
| TauI | GCSGC | 4 cut(s) | 358, 382, 424, 544 |
| TfiI | GAWTC | 7 cut(s) | 510, 558, 582, 603, 624, 783, 1151 |
| Tru1I | TTAA | 2 cut(s) | 149, 986 |
| Tru9I | TTAA | 2 cut(s) | 149, 986 |
| TscAI | CASTG | 2 cut(s) | 170, 943 |
| TseFI | GTSAC | 3 cut(s) | 550, 616, 637 |
| TseI | GCWGC | 6 cut(s) | 305, 322, 372, 407, 544, 631 |
| Tsp45I | GTSAC | 3 cut(s) | 550, 616, 637 |
| TspDTI | ATGAA | 3 cut(s) | 377, 502, 1024 |
| TspGWI | ACGGA | 2 cut(s) | 284, 378 |
| TspRI | CASTG | 2 cut(s) | 170, 943 |
| VpaK11BI | GGWCC | 1 cut(s) | 195 |
| XapI | RAATTY | 1 cut(s) | 529 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 511 |
| XmiI | GTMKAC | 1 cut(s) | 432 |
| XspI | CTAG | 2 cut(s) | 21, 105 |