AT1G74910

Nucleotidyl transferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
28135361 .. 28138971
3611 bp
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UTR
Exon/CDS
Intron
AT1G74910.2

Sequence Viewer

Length: 1248 bp
ATGGGGAGCTCAATGGAGGAGAAAGTGGTGGCTGTGATCATGGTCGGTGGTCCAACCAAAGGCACTCGATTTCGGCCATTGTCGCTGAATATTCCAAAGCCTCTGTTTCCTATTGCGGGACAACCAATGGTGCATCATCCAATTTCAGCTTGTAAAAGAATTCCAAATTTAGCTCAAATATATCTTGTTGGCTTCTATGAGGAAAGGGAATTTGCACTTTATGTTTCAGCCATCTCTAATGAACTTAAAGTTCCTGTTAGATATCTGCGAGAAGACAAACCACATGGTTCAGCTGGTGGGCTGTATCACTTTAGAAATCTTATTATGGAAGATAGTCCGTCTCATATCTTCCTGCTTAACTGTGATGTTTGCTGCAGTTTCCCCTTGCCCAAAATGCTCGAGGCTCACAGGGGATATGGTGGAATTGGAACTCTTCTTGTGATCAAGGTCTCTCCTGAATCAGCCAGCCAATTTGGAGAATTGGTTGCAGATCCAGTTACTAATGAGCTGCTTCATTACACCGAGAAACCCGAAACTTTTGTCAGTGATCGAATTAACTGTGGTGTTTATGTATTTACACCTGAAATTTTTAATGCCATAGGAGATGTTTCTACTCAGAGGAAAGATAGAGCAACTCTAAAACGTGTTTCCAGCTTCGAAGCTCTTCAACCGGCAACAAGGATCCCGACAGATTTTGTAAGACTGGATCAAGACATCCTTTCACCTCTAGCTGGGAAGAAACGGCTATATACTTATGAGACTATGGATTTCTGGGAGCAAATCAAATCTCCTGGGATGTCGTTGAGGTGTTCAGGACTCTATCTTTCCCAATTCCGCTTGACATCTCCCCAACTGTTGGCTAGTGGTGATGGAACAAGGAGTGCCATTGTGATTGGTGATGTTTACATACATCCTTCTGCAAAAGTTCACCCAACTGCAAAGATTGGTCCCAACGTCTCAATCTCTGCAAATGCTCGTGTTGGACCGGGCGTCAGGCTTATGAGCTGCATCATCCTTGACGATGTTGAGATCATGGAAAATGCAGTGGTGACTAACGCAATTGTTGGGTGGAAATCTTCTATCGGGAGATGGTCCCGCGTCCAGGCTGAGGGAGTCTACAATTCGAAACTCGGAGTTACAATTCTCGGAGACTCGGTTGCAGTTGAAGACGAGGTTGTGGTGACCAGCAGTATTGTTCTTCCAAACAAGACACTGAACGTCAGTGTTCAAGACGAGATCATTTTGTAA

Protein Analysis

415

Amino Acids

45.56

Weight (kDa)

6.76

Isoelectric Point (pI)

42.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NTP_transferase PF00483 11 - 210 1.5e-30 Nucleotidyl transferase
LbH_EIF2B PF25084 293 - 374 1.2e-07 EIF2B subunit epsilon LbH domain
GMPPB_C PF25087 297 - 414 7.2e-37 GMPPB C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 856
AccI GTMKAC 1 cut(s) 1116
AccII CGCG 1 cut(s) 1098
AciI CCGC 3 cut(s) 116, 835, 1096
AclWI GGATC 4 cut(s) 485, 676, 689, 714
AcoI YGGCCR 1 cut(s) 74
AcsI RAATTY 4 cut(s) 159, 166, 209, 585
AcyI GRCGYC 1 cut(s) 990
AfiI CCNNNNNNNGG 6 cut(s) 59, 116, 731, 856, 1102, 1108
AflIII ACRYGT 1 cut(s) 643
AgsI TTSAA 3 cut(s) 668, 1166, 1229
AhdI GACNNNNNGTC 1 cut(s) 989
AjnI CCWGG 2 cut(s) 790, 1101
AluBI AGCT 9 cut(s) 9, 149, 173, 293, 508, 654, 662, 731, 1005
AluI AGCT 9 cut(s) 9, 149, 173, 293, 508, 654, 662, 731, 1005
Alw21I GWGCWC 1 cut(s) 11
Alw26I GTCTC 5 cut(s) 345, 454, 752, 961, 1143
AlwI GGATC 4 cut(s) 485, 676, 689, 714
Ama87I CYCGRG 1 cut(s) 398
AoxI GGCC 1 cut(s) 74
ApeKI GCWGC 3 cut(s) 372, 508, 1005
ApoI RAATTY 4 cut(s) 159, 166, 209, 585
ArsI GACNNNNNNTTYG 2 cut(s) 525, 557
Asp700I GAANNNNTTC 1 cut(s) 663
AspS9I GGNCC 4 cut(s) 50, 947, 983, 1092
AsuC2I CCSGG 1 cut(s) 987
AsuHPI GGTGA 6 cut(s) 714, 878, 908, 920, 1060, 1192
AsuII TTCGAA 2 cut(s) 657, 1124
AvaI CYCGRG 1 cut(s) 398
AvaII GGWCC 4 cut(s) 50, 947, 983, 1092
BamHI GGATCC 1 cut(s) 681
BanII GRGCYC 1 cut(s) 11
BauI CACGAG 1 cut(s) 975
BbsI GAAGAC 2 cut(s) 279, 1173
Bbv12I GWGCWC 1 cut(s) 11
BbvCI CCTCAGC 1 cut(s) 1107
BbvI GCAGC 3 cut(s) 359, 495, 992
BccI CCATC 3 cut(s) 239, 863, 1083
BceAI ACGGC 1 cut(s) 758
BciT130I CCWGG 2 cut(s) 792, 1103
BclI TGATCA 2 cut(s) 36, 441
BcnI CCSGG 1 cut(s) 987
BcoDI GTCTC 5 cut(s) 345, 454, 752, 961, 1143
BfaI CTAG 2 cut(s) 728, 861
BfmI CTRYAG 1 cut(s) 373
BisI GCNGC 3 cut(s) 373, 509, 1006
BlsI GCNGC 3 cut(s) 374, 510, 1007
Bme1390I CCNGG 3 cut(s) 792, 987, 1103
Bme18I GGWCC 4 cut(s) 50, 947, 983, 1092
BmeRI GACNNNNNGTC 1 cut(s) 989
BmeT110I CYCGRG 1 cut(s) 398
BmgT120I GGNCC 4 cut(s) 50, 947, 983, 1092
BmiI GGNNCC 3 cut(s) 683, 949, 1094
BmrFI CCNGG 3 cut(s) 792, 987, 1103
BmsI GCATC 2 cut(s) 142, 1017
BpiI GAAGAC 2 cut(s) 279, 1173
Bpu10I CCTNAGC 1 cut(s) 1107
Bpu14I TTCGAA 2 cut(s) 657, 1124
BpuMI CCSGG 1 cut(s) 987
BsaHI GRCGYC 1 cut(s) 990
BsaI GGTCTC 1 cut(s) 454
BsaJI CCNNGG 1 cut(s) 791
BsaXI ACNNNNNCTCC 4 cut(s) 468, 498, 1140, 1170
Bsc4I CCNNNNNNNGG 6 cut(s) 59, 116, 731, 856, 1102, 1108
Bse118I RCCGGY 1 cut(s) 670
Bse1I ACTGG 2 cut(s) 494, 708
BseBI CCWGG 2 cut(s) 792, 1103
BseDI CCNNGG 1 cut(s) 791
BseGI GGATG 5 cut(s) 136, 714, 801, 910, 1011
BseLI CCNNNNNNNGG 6 cut(s) 59, 116, 731, 856, 1102, 1108
BseMII CTCAG 2 cut(s) 629, 1098
BseNI ACTGG 2 cut(s) 494, 708
BseRI GAGGAG 1 cut(s) 32
BseXI GCAGC 3 cut(s) 359, 495, 992
BseYI CCCAGC 1 cut(s) 731
Bsh1236I CGCG 1 cut(s) 1098
BshFI GGCC 1 cut(s) 76
BsiHKAI GWGCWC 1 cut(s) 11
BsiHKCI CYCGRG 1 cut(s) 398
BsiSI CCGG 2 cut(s) 671, 986
BslFI GGGAC 3 cut(s) 132, 933, 1078
BslI CCNNNNNNNGG 6 cut(s) 59, 116, 731, 856, 1102, 1108
BsmAI GTCTC 5 cut(s) 345, 454, 752, 961, 1143
BsmBI CGTCTC 2 cut(s) 345, 961
BsmFI GGGAC 3 cut(s) 132, 933, 1078
BsnI GGCC 1 cut(s) 76
Bso31I GGTCTC 1 cut(s) 454
BsoBI CYCGRG 1 cut(s) 398
Bsp119I TTCGAA 2 cut(s) 657, 1124
Bsp1286I GDGCHC 1 cut(s) 11
Bsp143I GATC 8 cut(s) 36, 441, 490, 547, 681, 706, 1029, 1236
BspACI CCGC 3 cut(s) 116, 835, 1096
BspANI GGCC 1 cut(s) 76
BspCNI CTCAG 2 cut(s) 628, 1099
BspFNI CGCG 1 cut(s) 1098
BspLI GGNNCC 3 cut(s) 683, 949, 1094
BspMAI CTGCAG 1 cut(s) 377
BspPI GGATC 4 cut(s) 485, 676, 689, 714
BspQI GCTCTTC 1 cut(s) 669
BspT104I TTCGAA 2 cut(s) 657, 1124
BspTNI GGTCTC 1 cut(s) 454
BsrFI RCCGGY 1 cut(s) 670
BsrI ACTGG 2 cut(s) 494, 708
BssAI RCCGGY 1 cut(s) 670
BssECI CCNNGG 1 cut(s) 791
BssMI GATC 8 cut(s) 36, 441, 490, 547, 681, 706, 1029, 1236
BssNI GRCGYC 1 cut(s) 990
BssSI CACGAG 1 cut(s) 975
Bst2BI CACGAG 1 cut(s) 975
Bst2UI CCWGG 2 cut(s) 792, 1103
Bst4CI ACNGT 3 cut(s) 362, 560, 855
Bst6I CTCTTC 2 cut(s) 438, 669
BstACI GRCGYC 1 cut(s) 990
BstBI TTCGAA 2 cut(s) 657, 1124
BstC8I GCNNGC 1 cut(s) 466
BstDEI CTNAG 2 cut(s) 615, 1107
BstEII GGTNACC 1 cut(s) 1180
BstF5I GGATG 5 cut(s) 136, 714, 801, 910, 1011
BstFNI CGCG 1 cut(s) 1098
BstKTI GATC 8 cut(s) 39, 444, 493, 550, 684, 709, 1032, 1239
BstMAI GTCTC 5 cut(s) 345, 454, 752, 961, 1143
BstMBI GATC 8 cut(s) 36, 441, 490, 547, 681, 706, 1029, 1236
BstMWI GCNNNNNNNGC 2 cut(s) 82, 394
BstNI CCWGG 2 cut(s) 792, 1103
BstPI GGTNACC 1 cut(s) 1180
BstSCI CCNGG 3 cut(s) 790, 985, 1101
BstSFI CTRYAG 1 cut(s) 373
BstUI CGCG 1 cut(s) 1098
BstV1I GCAGC 3 cut(s) 359, 495, 992
BstV2I GAAGAC 2 cut(s) 279, 1173
BstX2I RGATCY 2 cut(s) 490, 681
BstYI RGATCY 2 cut(s) 490, 681
BsuRI GGCC 1 cut(s) 76
BtsCI GGATG 5 cut(s) 136, 714, 801, 910, 1011
BtsI GCAGTG 1 cut(s) 1050
BtsIMutI CAGTG 4 cut(s) 550, 1050, 1211, 1228
Cac8I GCNNGC 1 cut(s) 466
Cfr10I RCCGGY 1 cut(s) 670
Cfr13I GGNCC 4 cut(s) 50, 947, 983, 1092
CseI GACGC 2 cut(s) 979, 1087
CviAII CATG 3 cut(s) 40, 284, 1033
DdeI CTNAG 2 cut(s) 615, 1107
DpnI GATC 8 cut(s) 38, 443, 492, 549, 683, 708, 1031, 1238
DpnII GATC 8 cut(s) 36, 441, 490, 547, 681, 706, 1029, 1236
DriI GACNNNNNGTC 1 cut(s) 989
EaeI YGGCCR 1 cut(s) 74
Eam1104I CTCTTC 2 cut(s) 438, 669
Eam1105I GACNNNNNGTC 1 cut(s) 989
EarI CTCTTC 2 cut(s) 438, 669
Ecl136II GAGCTC 1 cut(s) 9
Eco24I GRGCYC 1 cut(s) 11
Eco31I GGTCTC 1 cut(s) 454
Eco32I GATATC 1 cut(s) 263
Eco47I GGWCC 4 cut(s) 50, 947, 983, 1092
Eco53kI GAGCTC 1 cut(s) 9
Eco88I CYCGRG 1 cut(s) 398
Eco91I GGTNACC 1 cut(s) 1180
EcoICRI GAGCTC 1 cut(s) 9
EcoO65I GGTNACC 1 cut(s) 1180
EcoRI GAATTC 1 cut(s) 159
EcoRII CCWGG 2 cut(s) 790, 1101
EcoRV GATATC 1 cut(s) 263
EcoT38I GRGCYC 1 cut(s) 11
Esp3I CGTCTC 2 cut(s) 345, 961
FaeI CATG 3 cut(s) 43, 287, 1036
FalI AAGNNNNNCTT 2 cut(s) 702, 734
FaqI GGGAC 3 cut(s) 132, 933, 1078
FatI CATG 3 cut(s) 39, 283, 1032
FauI CCCGC 2 cut(s) 109, 1103
FbaI TGATCA 2 cut(s) 36, 441
FblI GTMKAC 1 cut(s) 1116
Fnu4HI GCNGC 3 cut(s) 373, 509, 1006
FokI GGATG 5 cut(s) 123, 701, 808, 897, 998
FriOI GRGCYC 1 cut(s) 11
Fsp4HI GCNGC 3 cut(s) 373, 509, 1006
FspBI CTAG 2 cut(s) 728, 861
GluI GCNGC 3 cut(s) 373, 509, 1006
GsaI CCCAGC 1 cut(s) 735
HaeIII GGCC 1 cut(s) 76
HapII CCGG 2 cut(s) 671, 986
HgaI GACGC 2 cut(s) 979, 1087
Hin1I GRCGYC 1 cut(s) 990
Hin1II CATG 3 cut(s) 43, 287, 1036
HinfI GANTC 4 cut(s) 458, 816, 1113, 1151
HpaII CCGG 2 cut(s) 671, 986
HphI GGTGA 6 cut(s) 714, 878, 908, 920, 1060, 1192
Hpy166II GTNNAC 3 cut(s) 904, 928, 1117
Hpy188I TCNGA 3 cut(s) 618, 1133, 1148
Hpy188III TCNNGA 6 cut(s) 455, 685, 710, 813, 1084, 1229
Hpy8I GTNNAC 3 cut(s) 904, 928, 1117
HpyAV CCTTC 1 cut(s) 924
HpyCH4III ACNGT 3 cut(s) 362, 560, 855
HpyCH4IV ACGT 3 cut(s) 643, 954, 1218
HpyF10VI GCNNNNNNNGC 2 cut(s) 82, 394
HpyF3I CTNAG 2 cut(s) 615, 1107
HpySE526I ACGT 3 cut(s) 643, 954, 1218
Hsp92I GRCGYC 1 cut(s) 990
Hsp92II CATG 3 cut(s) 43, 287, 1036
Ksp22I TGATCA 2 cut(s) 36, 441
Kzo9I GATC 8 cut(s) 36, 441, 490, 547, 681, 706, 1029, 1236
LguI GCTCTTC 1 cut(s) 669
LmnI GCTCC 2 cut(s) 6, 775
Lsp1109I GCAGC 3 cut(s) 359, 495, 992
LweI GCATC 2 cut(s) 142, 1017
MaeI CTAG 2 cut(s) 728, 861
MaeII ACGT 3 cut(s) 643, 954, 1218
MaeIII GTNAC 4 cut(s) 496, 1048, 1135, 1180
MalI GATC 8 cut(s) 38, 443, 492, 549, 683, 708, 1031, 1238
MboI GATC 8 cut(s) 36, 441, 490, 547, 681, 706, 1029, 1236
MboII GAAGA 9 cut(s) 284, 340, 341, 425, 656, 748, 1068, 1178, 1190
MfeI CAATTG 1 cut(s) 1059
MflI RGATCY 2 cut(s) 490, 681
MhlI GDGCHC 1 cut(s) 11
MlyI GAGTC 3 cut(s) 810, 1122, 1145
MmeI TCCRAC 2 cut(s) 77, 961
MnlI CCTC 9 cut(s) 10, 111, 193, 394, 612, 735, 798, 1102, 1165
MroXI GAANNNNTTC 1 cut(s) 663
MseI TTAA 4 cut(s) 246, 357, 555, 591
MspA1I CMGCKG 1 cut(s) 293
MspI CCGG 2 cut(s) 671, 986
MspR9I CCNGG 3 cut(s) 792, 987, 1103
MunI CAATTG 1 cut(s) 1059
MvaI CCWGG 2 cut(s) 792, 1103
MvnI CGCG 1 cut(s) 1098
MwoI GCNNNNNNNGC 2 cut(s) 82, 394
NciI CCSGG 1 cut(s) 987
NdeII GATC 8 cut(s) 36, 441, 490, 547, 681, 706, 1029, 1236
NlaIII CATG 3 cut(s) 43, 287, 1036
NlaIV GGNNCC 3 cut(s) 683, 949, 1094
NmuCI GTSAC 2 cut(s) 1048, 1180
NspV TTCGAA 2 cut(s) 657, 1124
PaeR7I CTCGAG 1 cut(s) 398
PciSI GCTCTTC 1 cut(s) 669
PdmI GAANNNNTTC 1 cut(s) 663
PfeI GAWTC 1 cut(s) 458
PflMI CCANNNNNTGG 1 cut(s) 856
PkrI GCNGC 3 cut(s) 374, 510, 1007
PleI GAGTC 3 cut(s) 810, 1121, 1145
PpsI GAGTC 3 cut(s) 810, 1121, 1145
Psp124BI GAGCTC 1 cut(s) 11
Psp6I CCWGG 2 cut(s) 790, 1101
PspEI GGTNACC 1 cut(s) 1180
PspFI CCCAGC 1 cut(s) 731
PspGI CCWGG 2 cut(s) 790, 1101
PspN4I GGNNCC 3 cut(s) 683, 949, 1094
PspPI GGNCC 4 cut(s) 50, 947, 983, 1092
PspXI VCTCGAGB 1 cut(s) 398
PstI CTGCAG 1 cut(s) 377
PsuI RGATCY 2 cut(s) 490, 681
PvuII CAGCTG 1 cut(s) 293
SacI GAGCTC 1 cut(s) 11
SapI GCTCTTC 1 cut(s) 669
SaqAI TTAA 4 cut(s) 246, 357, 555, 591
SatI GCNGC 3 cut(s) 373, 509, 1006
Sau3AI GATC 8 cut(s) 36, 441, 490, 547, 681, 706, 1029, 1236
Sau96I GGNCC 4 cut(s) 50, 947, 983, 1092
SchI GAGTC 3 cut(s) 810, 1122, 1145
ScrFI CCNGG 3 cut(s) 792, 987, 1103
SduI GDGCHC 1 cut(s) 11
SfaNI GCATC 2 cut(s) 142, 1017
SfcI CTRYAG 1 cut(s) 373
Sfr274I CTCGAG 1 cut(s) 398
SfuI TTCGAA 2 cut(s) 657, 1124
SinI GGWCC 4 cut(s) 50, 947, 983, 1092
SlaI CTCGAG 1 cut(s) 398
SmlI CTYRAG 1 cut(s) 398
SmoI CTYRAG 1 cut(s) 398
SsiI CCGC 3 cut(s) 116, 835, 1096
SspI AATATT 1 cut(s) 91
SspMI CTAG 2 cut(s) 728, 861
SstI GAGCTC 1 cut(s) 11
StyD4I CCNGG 3 cut(s) 790, 985, 1101
TaaI ACNGT 3 cut(s) 362, 560, 855
TaiI ACGT 3 cut(s) 646, 957, 1221
TaqI TCGA 5 cut(s) 67, 399, 550, 657, 1124
TfiI GAWTC 1 cut(s) 458
Tru1I TTAA 4 cut(s) 246, 357, 555, 591
Tru9I TTAA 4 cut(s) 246, 357, 555, 591
TscAI CASTG 4 cut(s) 550, 1050, 1218, 1228
TseFI GTSAC 2 cut(s) 1048, 1180
TseI GCWGC 3 cut(s) 372, 508, 1005
Tsp45I GTSAC 2 cut(s) 1048, 1180
TspDTI ATGAA 2 cut(s) 255, 503
TspGWI ACGGA 1 cut(s) 327
TspRI CASTG 4 cut(s) 550, 1050, 1218, 1228
Van91I CCANNNNNTGG 1 cut(s) 856
VpaK11BI GGWCC 4 cut(s) 50, 947, 983, 1092
XapI RAATTY 4 cut(s) 159, 166, 209, 585
XhoI CTCGAG 1 cut(s) 398
XmiI GTMKAC 1 cut(s) 1116
XmnI GAANNNNTTC 1 cut(s) 663
XspI CTAG 2 cut(s) 728, 861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.