Rh7AG027800

Mannose-1-phosphate guanyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0007684
Physical Location & Seq
Forward (+)
1830184 .. 1833633
3450 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG027800.1

Sequence Viewer

Length: 1140 bp
ATGGGGAGCTCAGAGGAGAAAGTTGTTGCTGTGATCATGGTGGGTGGGCCCACTAAAGGCACTAGATTCCGGCCACTGTCATTGAATATTCCGAAGCCACTTTTTCCTTTAGCCGGACAACCAATGGTTCATCATCCAATTTCTGCTTGTAAAAAGATTCCTAACCTGGGGCAAATCTTTCTCATTGGTTTCTATGAGGAGCGTGAGTTATCATTATATGTATCCGCAATCTCTAATGAGCTTAAGGTCCCCGTTAGATATTTGAGGGAAGACAGGCCACATGGTTCAGCTGGTGGACTTTATAACTTCAGAGATCTGATCATGGAAGACAGCCCAGTTTCTGCTGAGTCAGCAAGTCAGTTTGGGGAACTTGTAGCTGATCCAGTCACCAATGAACTGCTGCATTACACAGAGAAGCCTGAGACTTTTGTCAGTGACCGGATAAATTGTGGTGTCTACATATTCACACCAGATATTTTTAATGCCATAGAGGATGTTTCCTCTCAGCGGAAGGACGGAGCTGACTTAAGACGTCTATCCAGTTTTGAAGCCCTGCACTCCGCAACAAGGAGTGCATCCACACATTTTGTAAGGTTGGATCAAGATATCCTATCCCCTCTTGCAGGAAAGAAGCAGTTATATACATATGAAACCATGGACTTCTGGGAACAGATTAAAACTCCTGGAATGTCCTTGAAATGTTCTGGGTTGTATCTTTCACAATTCAGAGTCACCAGTCCCCATCTGTTGGTGAGTGGGGATGGTACAAAGAGTGCCAGTATTTCTGGTGATGTTTACATCCATCCATCAGCAAAAGTACACCCAAGTGCTAAAATTGGCCCTAATGTCTCAATATCTGCAAATGCTCGAATAGGAGCTGGTGTGAGGCTCATAAGTTGTATCATACTTGACAATGTCGAAATTAAGGAAAATGCAGTTGTTATGCATGCAATTATTGGATGGAAATCTTCTATTGGGAAATGGTCTCGTATCCAGGCTAGTGGGAATTACAATTCTAAGCTCGGGATCACAATCCTTGGTGAAGATGTGACAGTTGAAGATGAAGTCGTGGTTATCAACAGCATTGTCCTCCCCCATAAGACGCTCAATCTGAGTGTTCAGGAGGAAATAATTCTGTGA

Protein Analysis

379

Amino Acids

41.56

Weight (kDa)

6.27

Isoelectric Point (pI)

39.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NTP_transferase PF00483 10 - 111 1.4e-12 Nucleotidyl transferase
LbH_EIF2B PF25084 257 - 333 8.3e-09 EIF2B subunit epsilon LbH domain
Hexapep PF00132 259 - 292 1.5e-06 Bacterial transferase hexapeptide (six repeats)
GMPPB_C PF25087 261 - 378 5.6e-39 GMPPB C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 303
AatII GACGTC 1 cut(s) 535
AccB7I CCANNNNNTGG 1 cut(s) 748
AccI GTMKAC 1 cut(s) 456
AciI CCGC 3 cut(s) 225, 508, 561
AclWI GGATC 3 cut(s) 374, 606, 1034
AcoI YGGCCR 1 cut(s) 71
AcuI CTGAAG 1 cut(s) 292
AcyI GRCGYC 1 cut(s) 532
AfaI GTAC 2 cut(s) 766, 819
AfiI CCNNNNNNNGG 7 cut(s) 56, 113, 167, 507, 567, 623, 748
AflII CTTAAG 2 cut(s) 242, 526
AgsI TTSAA 4 cut(s) 85, 548, 697, 1058
AjnI CCWGG 3 cut(s) 165, 682, 993
AleI CACNNNNGTG 1 cut(s) 825
AluBI AGCT 7 cut(s) 9, 241, 290, 377, 521, 878, 1021
AluI AGCT 7 cut(s) 9, 241, 290, 377, 521, 878, 1021
Alw21I GWGCWC 1 cut(s) 11
Alw26I GTCTC 3 cut(s) 416, 853, 990
AlwI GGATC 3 cut(s) 374, 606, 1034
AlwNI CAGNNNCTG 1 cut(s) 341
Ama87I CYCGRG 1 cut(s) 1022
AoxI GGCC 4 cut(s) 47, 71, 275, 838
ApaI GGGCCC 1 cut(s) 51
ApeKI GCWGC 1 cut(s) 400
Asp700I GAANNNNTTC 1 cut(s) 1131
AspS9I GGNCC 4 cut(s) 47, 48, 247, 839
AsuHPI GGTGA 5 cut(s) 379, 724, 763, 800, 1052
AvaI CYCGRG 1 cut(s) 1022
AvaII GGWCC 1 cut(s) 247
BaeGI GKGCMC 1 cut(s) 51
BanII GRGCYC 2 cut(s) 11, 51
BbsI GAAGAC 2 cut(s) 276, 333
Bbv12I GWGCWC 1 cut(s) 11
BbvI GCAGC 1 cut(s) 387
BccI CCATC 5 cut(s) 750, 755, 810, 814, 954
BciT130I CCWGG 3 cut(s) 167, 684, 995
BciVI GTATCC 2 cut(s) 232, 1001
BclI TGATCA 2 cut(s) 33, 318
BcoDI GTCTC 3 cut(s) 416, 853, 990
BfaI CTAG 2 cut(s) 63, 999
BfrI CTTAAG 2 cut(s) 242, 526
BfuI GTATCC 2 cut(s) 232, 1001
BglII AGATCT 1 cut(s) 313
BisI GCNGC 1 cut(s) 401
BlsI GCNGC 1 cut(s) 402
Bme1390I CCNGG 3 cut(s) 167, 684, 995
Bme18I GGWCC 1 cut(s) 247
BmeT110I CYCGRG 1 cut(s) 1022
BmgT120I GGNCC 4 cut(s) 47, 48, 247, 839
BmiI GGNNCC 2 cut(s) 49, 249
BmrFI CCNGG 3 cut(s) 167, 684, 995
BmrI ACTGGG 1 cut(s) 329
BmsI GCATC 1 cut(s) 584
BmuI ACTGGG 1 cut(s) 329
BoxI GACNNNNGTC 1 cut(s) 428
BpiI GAAGAC 2 cut(s) 276, 333
BsaBI GATNNNNATC 2 cut(s) 964, 1031
BsaHI GRCGYC 1 cut(s) 532
BsaI GGTCTC 1 cut(s) 990
BsaJI CCNNGG 3 cut(s) 166, 654, 1036
BsaWI WCCGGW 1 cut(s) 438
BsaXI ACNNNNNCTCC 4 cut(s) 191, 221, 867, 897
Bsc4I CCNNNNNNNGG 7 cut(s) 56, 113, 167, 507, 567, 623, 748
Bse1I ACTGG 5 cut(s) 335, 383, 540, 735, 777
Bse8I GATNNNNATC 2 cut(s) 964, 1031
BseBI CCWGG 3 cut(s) 167, 684, 995
BseDI CCNNGG 3 cut(s) 166, 654, 1036
BseGI GGATG 7 cut(s) 133, 499, 575, 766, 798, 802, 965
BseJI GATNNNNATC 2 cut(s) 964, 1031
BseLI CCNNNNNNNGG 7 cut(s) 56, 113, 167, 507, 567, 623, 748
BseMII CTCAG 5 cut(s) 24, 336, 411, 518, 1103
BseNI ACTGG 5 cut(s) 335, 383, 540, 735, 777
BseRI GAGGAG 2 cut(s) 29, 212
BseSI GKGCMC 1 cut(s) 51
BseXI GCAGC 1 cut(s) 387
BsgI GTGCAG 1 cut(s) 539
BshFI GGCC 4 cut(s) 49, 73, 277, 840
BsiHKAI GWGCWC 1 cut(s) 11
BsiHKCI CYCGRG 1 cut(s) 1022
BsiSI CCGG 3 cut(s) 70, 114, 439
BslFI GGGAC 2 cut(s) 233, 723
BslI CCNNNNNNNGG 7 cut(s) 56, 113, 167, 507, 567, 623, 748
BsmAI GTCTC 3 cut(s) 416, 853, 990
BsmFI GGGAC 2 cut(s) 233, 723
BsnI GGCC 4 cut(s) 49, 73, 277, 840
Bso31I GGTCTC 1 cut(s) 990
BsoBI CYCGRG 1 cut(s) 1022
Bsp120I GGGCCC 1 cut(s) 47
Bsp1286I GDGCHC 2 cut(s) 11, 51
Bsp143I GATC 6 cut(s) 33, 313, 318, 379, 598, 1026
Bsp19I CCATGG 1 cut(s) 654
BspACI CCGC 3 cut(s) 225, 508, 561
BspANI GGCC 4 cut(s) 49, 73, 277, 840
BspCNI CTCAG 5 cut(s) 23, 337, 412, 517, 1104
BspLI GGNNCC 2 cut(s) 49, 249
BspPI GGATC 3 cut(s) 374, 606, 1034
BspTI CTTAAG 2 cut(s) 242, 526
BspTNI GGTCTC 1 cut(s) 990
BsrI ACTGG 5 cut(s) 335, 383, 540, 735, 777
BssECI CCNNGG 3 cut(s) 166, 654, 1036
BssMI GATC 6 cut(s) 33, 313, 318, 379, 598, 1026
BssNI GRCGYC 1 cut(s) 532
BssT1I CCWWGG 2 cut(s) 654, 1036
Bst2UI CCWGG 3 cut(s) 167, 684, 995
Bst4CI ACNGT 2 cut(s) 78, 1054
BstACI GRCGYC 1 cut(s) 532
BstAFI CTTAAG 2 cut(s) 242, 526
BstC8I GCNNGC 1 cut(s) 948
BstDEI CTNAG 6 cut(s) 10, 345, 420, 504, 1017, 1112
BstDSI CCRYGG 1 cut(s) 654
BstENI CCTNNNNNAGG 1 cut(s) 621
BstF5I GGATG 7 cut(s) 133, 499, 575, 766, 798, 802, 965
BstKTI GATC 6 cut(s) 36, 316, 321, 382, 601, 1029
BstMAI GTCTC 3 cut(s) 416, 853, 990
BstMBI GATC 6 cut(s) 33, 313, 318, 379, 598, 1026
BstMWI GCNNNNNNNGC 1 cut(s) 350
BstNI CCWGG 3 cut(s) 167, 684, 995
BstNSI RCATGY 1 cut(s) 950
BstPAI GACNNNNGTC 1 cut(s) 428
BstSCI CCNGG 3 cut(s) 165, 682, 993
BstSLI GKGCMC 1 cut(s) 51
BstV1I GCAGC 1 cut(s) 387
BstV2I GAAGAC 2 cut(s) 276, 333
BstX2I RGATCY 1 cut(s) 313
BstXI CCANNNNNNTGG 1 cut(s) 1001
BstYI RGATCY 1 cut(s) 313
BsuI GTATCC 2 cut(s) 232, 1001
BsuRI GGCC 4 cut(s) 49, 73, 277, 840
BtgI CCRYGG 1 cut(s) 654
BtsCI GGATG 7 cut(s) 133, 499, 575, 766, 798, 802, 965
BtsIMutI CAGTG 2 cut(s) 74, 439
Cac8I GCNNGC 1 cut(s) 948
CaiI CAGNNNCTG 1 cut(s) 341
Cfr13I GGNCC 4 cut(s) 47, 48, 247, 839
CseI GACGC 1 cut(s) 1111
Csp6I GTAC 2 cut(s) 765, 818
CspCI CAANNNNNGTGG 4 cut(s) 63, 98, 568, 603
CviAII CATG 5 cut(s) 37, 281, 322, 655, 947
CviQI GTAC 2 cut(s) 765, 818
DdeI CTNAG 6 cut(s) 10, 345, 420, 504, 1017, 1112
DpnI GATC 6 cut(s) 35, 315, 320, 381, 600, 1028
DpnII GATC 6 cut(s) 33, 313, 318, 379, 598, 1026
EaeI YGGCCR 1 cut(s) 71
Ecl136II GAGCTC 1 cut(s) 9
Eco130I CCWWGG 2 cut(s) 654, 1036
Eco24I GRGCYC 2 cut(s) 11, 51
Eco31I GGTCTC 1 cut(s) 990
Eco32I GATATC 1 cut(s) 607
Eco47I GGWCC 1 cut(s) 247
Eco53kI GAGCTC 1 cut(s) 9
Eco57I CTGAAG 1 cut(s) 292
Eco88I CYCGRG 1 cut(s) 1022
EcoICRI GAGCTC 1 cut(s) 9
EcoNI CCTNNNNNAGG 1 cut(s) 621
EcoO109I RGGNCCY 1 cut(s) 247
EcoRII CCWGG 3 cut(s) 165, 682, 993
EcoRV GATATC 1 cut(s) 607
EcoT14I CCWWGG 2 cut(s) 654, 1036
EcoT22I ATGCAT 1 cut(s) 948
EcoT38I GRGCYC 2 cut(s) 11, 51
ErhI CCWWGG 2 cut(s) 654, 1036
FaeI CATG 5 cut(s) 40, 284, 325, 658, 950
FaqI GGGAC 2 cut(s) 233, 723
FatI CATG 5 cut(s) 36, 280, 321, 654, 946
FauNDI CATATG 1 cut(s) 646
FbaI TGATCA 2 cut(s) 33, 318
FblI GTMKAC 1 cut(s) 456
Fnu4HI GCNGC 1 cut(s) 401
FokI GGATG 7 cut(s) 120, 506, 562, 773, 785, 789, 972
FriOI GRGCYC 2 cut(s) 11, 51
Fsp4HI GCNGC 1 cut(s) 401
FspBI CTAG 2 cut(s) 63, 999
GluI GCNGC 1 cut(s) 401
HaeIII GGCC 4 cut(s) 49, 73, 277, 840
HapII CCGG 3 cut(s) 70, 114, 439
HgaI GACGC 1 cut(s) 1111
Hin1I GRCGYC 1 cut(s) 532
Hin1II CATG 5 cut(s) 40, 284, 325, 658, 950
HinfI GANTC 4 cut(s) 66, 157, 347, 729
HpaII CCGG 3 cut(s) 70, 114, 439
HphI GGTGA 5 cut(s) 379, 724, 763, 800, 1052
Hpy166II GTNNAC 4 cut(s) 296, 457, 796, 820
Hpy188I TCNGA 6 cut(s) 13, 93, 311, 318, 728, 1113
Hpy188III TCNNGA 3 cut(s) 602, 1024, 1121
Hpy8I GTNNAC 4 cut(s) 296, 457, 796, 820
HpyAV CCTTC 1 cut(s) 505
HpyCH4III ACNGT 2 cut(s) 78, 1054
HpyCH4IV ACGT 1 cut(s) 532
HpyCH4V TGCA 8 cut(s) 403, 556, 575, 623, 860, 935, 946, 950
HpyF10VI GCNNNNNNNGC 1 cut(s) 350
HpyF3I CTNAG 6 cut(s) 10, 345, 420, 504, 1017, 1112
HpySE526I ACGT 1 cut(s) 532
Hsp92I GRCGYC 1 cut(s) 532
Hsp92II CATG 5 cut(s) 40, 284, 325, 658, 950
Ksp22I TGATCA 2 cut(s) 33, 318
Kzo9I GATC 6 cut(s) 33, 313, 318, 379, 598, 1026
LmnI GCTCC 4 cut(s) 6, 199, 518, 875
Lsp1109I GCAGC 1 cut(s) 387
LweI GCATC 1 cut(s) 584
MaeI CTAG 2 cut(s) 63, 999
MaeII ACGT 1 cut(s) 532
MaeIII GTNAC 4 cut(s) 385, 434, 730, 1048
MalI GATC 6 cut(s) 35, 315, 320, 381, 600, 1028
MboI GATC 6 cut(s) 33, 313, 318, 379, 598, 1026
MboII GAAGA 5 cut(s) 281, 338, 960, 1055, 1070
MflI RGATCY 1 cut(s) 313
MhlI GDGCHC 2 cut(s) 11, 51
MluCI AATT 9 cut(s) 138, 445, 722, 834, 921, 951, 1006, 1012, 1131
MlyI GAGTC 2 cut(s) 356, 738
MmeI TCCRAC 1 cut(s) 576
MnlI CCTC 9 cut(s) 7, 190, 258, 484, 511, 627, 879, 1100, 1117
Mph1103I ATGCAT 1 cut(s) 948
MroXI GAANNNNTTC 1 cut(s) 1131
MseI TTAA 5 cut(s) 243, 480, 527, 675, 924
MslI CAYNNNNRTG 1 cut(s) 825
MspA1I CMGCKG 2 cut(s) 290, 508
MspCI CTTAAG 2 cut(s) 242, 526
MspI CCGG 3 cut(s) 70, 114, 439
MspR9I CCNGG 3 cut(s) 167, 684, 995
MvaI CCWGG 3 cut(s) 167, 684, 995
MwoI GCNNNNNNNGC 1 cut(s) 350
NcoI CCATGG 1 cut(s) 654
NdeI CATATG 1 cut(s) 646
NdeII GATC 6 cut(s) 33, 313, 318, 379, 598, 1026
NlaIII CATG 5 cut(s) 40, 284, 325, 658, 950
NlaIV GGNNCC 2 cut(s) 49, 249
NmuCI GTSAC 4 cut(s) 385, 434, 730, 1048
NsiI ATGCAT 1 cut(s) 948
NspI RCATGY 1 cut(s) 950
OliI CACNNNNGTG 1 cut(s) 825
PaeI GCATGC 1 cut(s) 950
PdmI GAANNNNTTC 1 cut(s) 1131
PfeI GAWTC 2 cut(s) 66, 157
PflFI GACNNNGTC 1 cut(s) 914
PflMI CCANNNNNTGG 1 cut(s) 748
PfoI TCCNGGA 1 cut(s) 682
PkrI GCNGC 1 cut(s) 402
PleI GAGTC 2 cut(s) 355, 737
PpsI GAGTC 2 cut(s) 355, 737
PpuMI RGGWCCY 1 cut(s) 247
PshAI GACNNNNGTC 1 cut(s) 428
PsiI TTATAA 1 cut(s) 303
Psp124BI GAGCTC 1 cut(s) 11
Psp5II RGGWCCY 1 cut(s) 247
Psp6I CCWGG 3 cut(s) 165, 682, 993
PspGI CCWGG 3 cut(s) 165, 682, 993
PspN4I GGNNCC 2 cut(s) 49, 249
PspOMI GGGCCC 1 cut(s) 47
PspPI GGNCC 4 cut(s) 47, 48, 247, 839
PspPPI RGGWCCY 1 cut(s) 247
PstNI CAGNNNCTG 1 cut(s) 341
PsuI RGATCY 1 cut(s) 313
PsyI GACNNNGTC 1 cut(s) 914
PvuII CAGCTG 1 cut(s) 290
RsaI GTAC 2 cut(s) 766, 819
RsaNI GTAC 2 cut(s) 765, 818
RseI CAYNNNNRTG 1 cut(s) 825
SacI GAGCTC 1 cut(s) 11
SaqAI TTAA 5 cut(s) 243, 480, 527, 675, 924
SatI GCNGC 1 cut(s) 401
Sau3AI GATC 6 cut(s) 33, 313, 318, 379, 598, 1026
Sau96I GGNCC 4 cut(s) 47, 48, 247, 839
SchI GAGTC 2 cut(s) 356, 738
ScrFI CCNGG 3 cut(s) 167, 684, 995
SduI GDGCHC 2 cut(s) 11, 51
SfaNI GCATC 1 cut(s) 584
SinI GGWCC 1 cut(s) 247
SmiMI CAYNNNNRTG 1 cut(s) 825
SmlI CTYRAG 2 cut(s) 242, 526
SmoI CTYRAG 2 cut(s) 242, 526
SphI GCATGC 1 cut(s) 950
Sse9I AATT 9 cut(s) 138, 445, 722, 834, 921, 951, 1006, 1012, 1131
SsiI CCGC 3 cut(s) 225, 508, 561
SspI AATATT 1 cut(s) 88
SspMI CTAG 2 cut(s) 63, 999
SstI GAGCTC 1 cut(s) 11
StyD4I CCNGG 3 cut(s) 165, 682, 993
StyI CCWWGG 2 cut(s) 654, 1036
TaaI ACNGT 2 cut(s) 78, 1054
TaiI ACGT 1 cut(s) 535
TaqI TCGA 2 cut(s) 868, 918
TasI AATT 9 cut(s) 138, 445, 722, 834, 921, 951, 1006, 1012, 1131
TatI WGTACW 1 cut(s) 817
TfiI GAWTC 2 cut(s) 66, 157
Tru1I TTAA 5 cut(s) 243, 480, 527, 675, 924
Tru9I TTAA 5 cut(s) 243, 480, 527, 675, 924
TscAI CASTG 2 cut(s) 81, 439
TseFI GTSAC 4 cut(s) 385, 434, 730, 1048
TseI GCWGC 1 cut(s) 400
Tsp45I GTSAC 4 cut(s) 385, 434, 730, 1048
TspDTI ATGAA 4 cut(s) 119, 408, 663, 1077
TspGWI ACGGA 1 cut(s) 531
TspRI CASTG 2 cut(s) 81, 439
Tth111I GACNNNGTC 1 cut(s) 914
Van91I CCANNNNNTGG 1 cut(s) 748
Vha464I CTTAAG 2 cut(s) 242, 526
VpaK11BI GGWCC 1 cut(s) 247
XagI CCTNNNNNAGG 1 cut(s) 621
XceI RCATGY 1 cut(s) 950
XmiI GTMKAC 1 cut(s) 456
XmnI GAANNNNTTC 1 cut(s) 1131
XspI CTAG 2 cut(s) 63, 999
ZraI GACGTC 1 cut(s) 533
Zsp2I ATGCAT 1 cut(s) 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.