Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0007684

Physical Location & Seq

Genomic Coordinates Forward (+)

15121469 .. 15125361

Gene Structure 3893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G179900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1254 bp

ATGGGCAGCTCAGACGAGAAGGTGGTTGCTGTGATCATGGTGGGTGGACCCACTAAAGGTACTAGATTTCGGCCACTGTCACTGAATATTCCAAAGCCGCTTTTCCCTTTAGCTGGACAACCAATGGTTCATCATCCAATTTCTGCTTGTAAAAGGATTCCTAACCTCGGGCAGATTTTTCTCATTGGTTTCTATGAGGAACGTGAATTTGCATTGTATGTATCCTCAATCTCTAATGAGCTTAAGGTCCCCGTTAGATATTTGAGGGAAGACAAGCCGCATGGTTCAGCTGGTGGACTTTATAACTTCAGAGATCTGATCATGGAAGACAGCCCAGTTATTTCGCACATTTTCTTGTTGAATTGTGATGTTTGCTGCAGTTTTCCACTTCCAGAAATGCTTGAGGCTCACAGAAAACATGGTGGTATGGGAACGCTCCTTGTGATCAAGGTTTCTGCTGAATCAGCCAATCAGTTTGGGGAACTAGTAGCTGATCCAGTCACCAATGAACTGTTGCATTACACTGAGAAGCCTGAGACTTTTGTCAGTGACCGGATAAATTGTGGTGTGTACATATTTACACCAGACATTTTTAATGCCATCGAGGGTGTTTCCACTCAGTGGAAGGACAGAGCTGATTTAAGACGTCTATCGAGCTTTGAATCCCTTCATTCAGCAACAAGGAATGCTCCCACACATTTTGTAAGGTTGGATCAAGATATCCTGTCACCTCTTGCGGGGAAGAAGCAGTTATACACATATGAAACCTTGGACTTCTGGGAACAGATCAAAACTCCTGGAATGTCCTTGAAATGTTCTGGGTTATATCTTTCTCAATTTCGATTCACCACCCCCCATCTCTTGGTGAGTGGGGATGGTACAAAGAGTGCCAGTATTATTGGTGATGTTTATGTTCATCCATCAGCAAAAATACATCCAAGTGCAAAGATTGGTCCCAATGTCTCAATATCTGCAAATGCTCGTATAGGAGCTGGGGTGAGGCTCATAAGCTGTATCATCCTCGACAATGTCGAAATTAAGGACAACGCAGTCGTTATTCATGCAATTGTTGGATGGAAATCGTCTATTGGGAGATGGTCTCGTGTCCAGGCTAGTGGGAATTACAATTCAAAGCTGGGGACCACGATCCTTGGTGAAGCAGTGACAGTTGAAGATGAAGTGGTGGTTATTAACAGCGTTGTCCTCCCTCACAAGACTCTCAATGTCAGTGTTCGAGAAGAAATAATTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004475 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008905 GO:0009058 GO:0009225 GO:0009226 GO:0009298 GO:0009987 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0019673 GO:0034641 GO:0034654 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0046483 GO:0055086 GO:0070568 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00051 ko00520 ko01100 ko01110 map00051 map00520 map01100 map01110

Pfam Domains

Protein Families

Hexapep NTP_transferase

Protein Analysis

418

Amino Acids

45.93

Weight (kDa)

6.92

Isoelectric Point (pI)

34.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74910 AT1G74910 AT1G74910
fragaria_vesca	FvH4_5g16340 FvH4_5g16340 FvH4_5g16340 FvH4_5g16340 FvH4_5g16340
malus_domestica	MD06G1181600.v1.1 MD14G1187500.v1.1
prunus_persica	Prupe.5G179900_v2.0.a1 Prupe.5G179900_v2.0.a1 Prupe.5G179900_v2.0.a1
pyrus_communis	pycom06g16060
rosa_chinensis	RchiOBHm_Chr7g0179791
rosa_multiflora	Rmu_sc0001754.1_g000007
rosa_roxburghii	Rroxscaffold_3G00273470
rosa_rugosa	Rorug06G0428100 Rorug06G0428200
rosa_samantha	Rh7AG027800 Rh7BG027000 Rh7CG028900 Rh7DG028400
rosa_wichuraiana	Rw7G002230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	303
AasI	GACNNNNNNGTC	1 cut(s)	1049
AatII	GACGTC	1 cut(s)	649
AccB7I	CCANNNNNTGG	2 cut(s)	621, 862
AciI	CCGC	3 cut(s)	98, 278, 737
AclWI	GGATC	3 cut(s)	488, 720, 1141
AcoI	YGGCCR	1 cut(s)	71
AcsI	RAATTY	1 cut(s)	206
AcuI	CTGAAG	1 cut(s)	292
AcyI	GRCGYC	1 cut(s)	646
AdeI	CACNNNGTG	1 cut(s)	621
AfaI	GTAC	3 cut(s)	61, 572, 880
AfiI	CCNNNNNNNGG	6 cut(s)	56, 113, 167, 621, 737, 862
AflII	CTTAAG	1 cut(s)	242
AgsI	TTSAA	5 cut(s)	361, 662, 811, 1131, 1172
AhlI	ACTAGT	1 cut(s)	484
AjnI	CCWGG	2 cut(s)	796, 1107
Alw26I	GTCTC	3 cut(s)	530, 967, 1104
AlwI	GGATC	3 cut(s)	488, 720, 1141
Ama87I	CYCGRG	1 cut(s)	167
AoxI	GGCC	1 cut(s)	71
ApeKI	GCWGC	2 cut(s)	6, 375
ApoI	RAATTY	1 cut(s)	206
Asp700I	GAANNNNTTC	2 cut(s)	666, 1245
AspS9I	GGNCC	4 cut(s)	47, 247, 953, 1140
AsuHPI	GGTGA	7 cut(s)	493, 720, 838, 877, 914, 1009, 1166
AvaI	CYCGRG	1 cut(s)	167
AvaII	GGWCC	4 cut(s)	47, 247, 953, 1140
BarI	GAAGNNNNNNTAC	2 cut(s)	737, 769
BauI	CACGAG	1 cut(s)	1101
BbsI	GAAGAC	2 cut(s)	276, 333
BbvI	GCAGC	2 cut(s)	18, 362
BccI	CCATC	6 cut(s)	608, 864, 869, 928, 1068, 1089
BciT130I	CCWGG	2 cut(s)	798, 1109
BciVI	GTATCC	1 cut(s)	232
BclI	TGATCA	3 cut(s)	33, 318, 444
BcoDI	GTCTC	3 cut(s)	530, 967, 1104
BcuI	ACTAGT	1 cut(s)	484
BfaI	CTAG	3 cut(s)	63, 485, 1113
BfmI	CTRYAG	1 cut(s)	376
BfrI	CTTAAG	1 cut(s)	242
BfuI	GTATCC	1 cut(s)	232
BglII	AGATCT	1 cut(s)	313
BisI	GCNGC	4 cut(s)	7, 98, 278, 376
BlsI	GCNGC	4 cut(s)	8, 99, 279, 377
Bme1390I	CCNGG	2 cut(s)	798, 1109
Bme18I	GGWCC	4 cut(s)	47, 247, 953, 1140
BmeT110I	CYCGRG	1 cut(s)	167
BmgT120I	GGNCC	4 cut(s)	47, 247, 953, 1140
BmiI	GGNNCC	4 cut(s)	49, 249, 955, 1141
BmrFI	CCNGG	2 cut(s)	798, 1109
BmrI	ACTGGG	1 cut(s)	329
BmuI	ACTGGG	1 cut(s)	329
BoxI	GACNNNNGTC	1 cut(s)	542
BpiI	GAAGAC	2 cut(s)	276, 333
BplI	GAGNNNNNCTC	2 cut(s)	1084, 1116
BpuEI	CTTGAG	1 cut(s)	422
BsaBI	GATNNNNATC	1 cut(s)	1078
BsaHI	GRCGYC	1 cut(s)	646
BsaI	GGTCTC	1 cut(s)	1104
BsaJI	CCNNGG	3 cut(s)	166, 768, 1150
BsaWI	WCCGGW	1 cut(s)	552
BsaXI	ACNNNNNCTCC	2 cut(s)	981, 1011
Bsc4I	CCNNNNNNNGG	6 cut(s)	56, 113, 167, 621, 737, 862
Bse1I	ACTGG	3 cut(s)	335, 497, 891
Bse8I	GATNNNNATC	1 cut(s)	1078
BseBI	CCWGG	2 cut(s)	798, 1109
BseDI	CCNNGG	3 cut(s)	166, 768, 1150
BseGI	GGATG	6 cut(s)	133, 880, 916, 934, 1017, 1079
BseJI	GATNNNNATC	1 cut(s)	1078
BseLI	CCNNNNNNNGG	6 cut(s)	56, 113, 167, 621, 737, 862
BseMII	CTCAG	4 cut(s)	24, 516, 525, 632
BseNI	ACTGG	3 cut(s)	335, 497, 891
BseXI	GCAGC	2 cut(s)	18, 362
BseYI	CCCAGC	2 cut(s)	992, 1135
BshFI	GGCC	1 cut(s)	73
BsiHKCI	CYCGRG	1 cut(s)	167
BsiSI	CCGG	1 cut(s)	553
BslFI	GGGAC	3 cut(s)	233, 939, 1153
BslI	CCNNNNNNNGG	6 cut(s)	56, 113, 167, 621, 737, 862
BsmAI	GTCTC	3 cut(s)	530, 967, 1104
BsmFI	GGGAC	3 cut(s)	233, 939, 1153
BsmI	GAATGC	1 cut(s)	691
BsnI	GGCC	1 cut(s)	73
Bso31I	GGTCTC	1 cut(s)	1104
BsoBI	CYCGRG	1 cut(s)	167
Bsp1407I	TGTACA	1 cut(s)	570
Bsp143I	GATC	8 cut(s)	33, 313, 318, 444, 493, 712, 786, 1146
BspACI	CCGC	3 cut(s)	98, 278, 737
BspANI	GGCC	1 cut(s)	73
BspCNI	CTCAG	4 cut(s)	23, 517, 526, 631
BspLI	GGNNCC	4 cut(s)	49, 249, 955, 1141
BspMAI	CTGCAG	1 cut(s)	380
BspPI	GGATC	3 cut(s)	488, 720, 1141
BspTI	CTTAAG	1 cut(s)	242
BspTNI	GGTCTC	1 cut(s)	1104
BsrGI	TGTACA	1 cut(s)	570
BsrI	ACTGG	3 cut(s)	335, 497, 891
BssECI	CCNNGG	3 cut(s)	166, 768, 1150
BssMI	GATC	8 cut(s)	33, 313, 318, 444, 493, 712, 786, 1146
BssNI	GRCGYC	1 cut(s)	646
BssSI	CACGAG	1 cut(s)	1101
BssT1I	CCWWGG	2 cut(s)	768, 1150
Bst2BI	CACGAG	1 cut(s)	1101
Bst2UI	CCWGG	2 cut(s)	798, 1109
Bst4CI	ACNGT	3 cut(s)	78, 513, 1168
BstACI	GRCGYC	1 cut(s)	646
BstAFI	CTTAAG	1 cut(s)	242
BstAUI	TGTACA	1 cut(s)	570
BstDEI	CTNAG	4 cut(s)	10, 525, 534, 618
BstF5I	GGATG	6 cut(s)	133, 880, 916, 934, 1017, 1079
BstKTI	GATC	8 cut(s)	36, 316, 321, 447, 496, 715, 789, 1149
BstMAI	GTCTC	3 cut(s)	530, 967, 1104
BstMBI	GATC	8 cut(s)	33, 313, 318, 444, 493, 712, 786, 1146
BstMWI	GCNNNNNNNGC	1 cut(s)	464
BstNI	CCWGG	2 cut(s)	798, 1109
BstPAI	GACNNNNGTC	1 cut(s)	542
BstSCI	CCNGG	2 cut(s)	796, 1107
BstSFI	CTRYAG	1 cut(s)	376
BstV1I	GCAGC	2 cut(s)	18, 362
BstV2I	GAAGAC	2 cut(s)	276, 333
BstX2I	RGATCY	1 cut(s)	313
BstXI	CCANNNNNNTGG	1 cut(s)	1115
BstYI	RGATCY	1 cut(s)	313
BsuI	GTATCC	1 cut(s)	232
BsuRI	GGCC	1 cut(s)	73
BtsCI	GGATG	6 cut(s)	133, 880, 916, 934, 1017, 1079
BtsI	GCAGTG	1 cut(s)	1167
BtsIMutI	CAGTG	7 cut(s)	74, 80, 522, 553, 626, 1167, 1234
Cfr13I	GGNCC	4 cut(s)	47, 247, 953, 1140
Csp6I	GTAC	3 cut(s)	60, 571, 879
CspCI	CAANNNNNGTGG	4 cut(s)	682, 717, 1132, 1167
CviAII	CATG	5 cut(s)	37, 281, 322, 419, 1061
CviQI	GTAC	3 cut(s)	60, 571, 879
DdeI	CTNAG	4 cut(s)	10, 525, 534, 618
DpnI	GATC	8 cut(s)	35, 315, 320, 446, 495, 714, 788, 1148
DpnII	GATC	8 cut(s)	33, 313, 318, 444, 493, 712, 786, 1146
DraIII	CACNNNGTG	1 cut(s)	621
DrdI	GACNNNNNNGTC	1 cut(s)	1049
DseDI	GACNNNNNNGTC	1 cut(s)	1049
EaeI	YGGCCR	1 cut(s)	71
Eco130I	CCWWGG	2 cut(s)	768, 1150
Eco31I	GGTCTC	1 cut(s)	1104
Eco32I	GATATC	1 cut(s)	721
Eco47I	GGWCC	4 cut(s)	47, 247, 953, 1140
Eco57I	CTGAAG	1 cut(s)	292
Eco88I	CYCGRG	1 cut(s)	167
EcoO109I	RGGNCCY	1 cut(s)	247
EcoRII	CCWGG	2 cut(s)	796, 1107
EcoRV	GATATC	1 cut(s)	721
EcoT14I	CCWWGG	2 cut(s)	768, 1150
ErhI	CCWWGG	2 cut(s)	768, 1150
FaeI	CATG	5 cut(s)	40, 284, 325, 422, 1064
FaqI	GGGAC	3 cut(s)	233, 939, 1153
FatI	CATG	5 cut(s)	36, 280, 321, 418, 1060
FauI	CCCGC	1 cut(s)	730
FauNDI	CATATG	1 cut(s)	760
FbaI	TGATCA	3 cut(s)	33, 318, 444
Fnu4HI	GCNGC	4 cut(s)	7, 98, 278, 376
FokI	GGATG	6 cut(s)	120, 887, 903, 921, 1004, 1086
Fsp4HI	GCNGC	4 cut(s)	7, 98, 278, 376
FspBI	CTAG	3 cut(s)	63, 485, 1113
GluI	GCNGC	4 cut(s)	7, 98, 278, 376
GsaI	CCCAGC	2 cut(s)	996, 1139
HaeIII	GGCC	1 cut(s)	73
HapII	CCGG	1 cut(s)	553
Hin1I	GRCGYC	1 cut(s)	646
Hin1II	CATG	5 cut(s)	40, 284, 325, 422, 1064
HinfI	GANTC	5 cut(s)	157, 461, 662, 843, 1216
HpaII	CCGG	1 cut(s)	553
HphI	GGTGA	7 cut(s)	493, 720, 838, 877, 914, 1009, 1166
Hpy166II	GTNNAC	3 cut(s)	47, 296, 571
Hpy188I	TCNGA	3 cut(s)	13, 311, 318
Hpy188III	TCNNGA	3 cut(s)	392, 716, 1235
Hpy8I	GTNNAC	3 cut(s)	47, 296, 571
HpyAV	CCTTC	3 cut(s)	13, 619, 677
HpyCH4III	ACNGT	3 cut(s)	78, 513, 1168
HpyCH4IV	ACGT	2 cut(s)	202, 646
HpyCH4V	TGCA	6 cut(s)	212, 378, 517, 944, 974, 1064
HpyF10VI	GCNNNNNNNGC	1 cut(s)	464
HpyF3I	CTNAG	4 cut(s)	10, 525, 534, 618
HpySE526I	ACGT	2 cut(s)	202, 646
Hsp92I	GRCGYC	1 cut(s)	646
Hsp92II	CATG	5 cut(s)	40, 284, 325, 422, 1064
Ksp22I	TGATCA	3 cut(s)	33, 318, 444
Kzo9I	GATC	8 cut(s)	33, 313, 318, 444, 493, 712, 786, 1146
LmnI	GCTCC	3 cut(s)	441, 694, 989
Lsp1109I	GCAGC	2 cut(s)	18, 362
MaeI	CTAG	3 cut(s)	63, 485, 1113
MaeII	ACGT	2 cut(s)	202, 646
MaeIII	GTNAC	5 cut(s)	78, 499, 548, 726, 1162
MalI	GATC	8 cut(s)	35, 315, 320, 446, 495, 714, 788, 1148
MboI	GATC	8 cut(s)	33, 313, 318, 444, 493, 712, 786, 1146
MboII	GAAGA	5 cut(s)	281, 338, 754, 1184, 1250
MfeI	CAATTG	1 cut(s)	1065
MflI	RGATCY	1 cut(s)	313
MlyI	GAGTC	1 cut(s)	1210
MmeI	TCCRAC	2 cut(s)	690, 1051
MroXI	GAANNNNTTC	2 cut(s)	666, 1245
MseI	TTAA	5 cut(s)	243, 594, 641, 1038, 1191
MslI	CAYNNNNRTG	1 cut(s)	939
MspA1I	CMGCKG	1 cut(s)	290
MspCI	CTTAAG	1 cut(s)	242
MspI	CCGG	1 cut(s)	553
MspR9I	CCNGG	2 cut(s)	798, 1109
MunI	CAATTG	1 cut(s)	1065
Mva1269I	GAATGC	1 cut(s)	691
MvaI	CCWGG	2 cut(s)	798, 1109
MwoI	GCNNNNNNNGC	1 cut(s)	464
NdeI	CATATG	1 cut(s)	760
NdeII	GATC	8 cut(s)	33, 313, 318, 444, 493, 712, 786, 1146
NlaIII	CATG	5 cut(s)	40, 284, 325, 422, 1064
NlaIV	GGNNCC	4 cut(s)	49, 249, 955, 1141
NmuCI	GTSAC	5 cut(s)	78, 499, 548, 726, 1162
PcsI	WCGNNNNNNNCGW	1 cut(s)	1029
PctI	GAATGC	1 cut(s)	691
PdmI	GAANNNNTTC	2 cut(s)	666, 1245
PfeI	GAWTC	4 cut(s)	157, 461, 662, 843
PflFI	GACNNNGTC	1 cut(s)	1028
PflMI	CCANNNNNTGG	2 cut(s)	621, 862
PfoI	TCCNGGA	1 cut(s)	796
PkrI	GCNGC	4 cut(s)	8, 99, 279, 377
PleI	GAGTC	1 cut(s)	1210
PpsI	GAGTC	1 cut(s)	1210
PpuMI	RGGWCCY	1 cut(s)	247
PshAI	GACNNNNGTC	1 cut(s)	542
PsiI	TTATAA	1 cut(s)	303
Psp5II	RGGWCCY	1 cut(s)	247
Psp6I	CCWGG	2 cut(s)	796, 1107
PspFI	CCCAGC	2 cut(s)	992, 1135
PspGI	CCWGG	2 cut(s)	796, 1107
PspN4I	GGNNCC	4 cut(s)	49, 249, 955, 1141
PspPI	GGNCC	4 cut(s)	47, 247, 953, 1140
PspPPI	RGGWCCY	1 cut(s)	247
PstI	CTGCAG	1 cut(s)	380
PsuI	RGATCY	1 cut(s)	313
PsyI	GACNNNGTC	1 cut(s)	1028
PvuII	CAGCTG	1 cut(s)	290
RsaI	GTAC	3 cut(s)	61, 572, 880
RsaNI	GTAC	3 cut(s)	60, 571, 879
RseI	CAYNNNNRTG	1 cut(s)	939
SaqAI	TTAA	5 cut(s)	243, 594, 641, 1038, 1191
SatI	GCNGC	4 cut(s)	7, 98, 278, 376
Sau3AI	GATC	8 cut(s)	33, 313, 318, 444, 493, 712, 786, 1146
Sau96I	GGNCC	4 cut(s)	47, 247, 953, 1140
SchI	GAGTC	1 cut(s)	1210
ScrFI	CCNGG	2 cut(s)	798, 1109
SfcI	CTRYAG	1 cut(s)	376
SinI	GGWCC	4 cut(s)	47, 247, 953, 1140
SmiMI	CAYNNNNRTG	1 cut(s)	939
SmlI	CTYRAG	2 cut(s)	242, 401
SmoI	CTYRAG	2 cut(s)	242, 401
SpeI	ACTAGT	1 cut(s)	484
SsiI	CCGC	3 cut(s)	98, 278, 737
SspI	AATATT	1 cut(s)	88
SspMI	CTAG	3 cut(s)	63, 485, 1113
StyD4I	CCNGG	2 cut(s)	796, 1107
StyI	CCWWGG	2 cut(s)	768, 1150
TaaI	ACNGT	3 cut(s)	78, 513, 1168
TaiI	ACGT	2 cut(s)	205, 649
TaqI	TCGA	6 cut(s)	603, 653, 841, 1023, 1032, 1234
TatI	WGTACW	1 cut(s)	570
TauI	GCSGC	2 cut(s)	100, 280
TfiI	GAWTC	4 cut(s)	157, 461, 662, 843
Tru1I	TTAA	5 cut(s)	243, 594, 641, 1038, 1191
Tru9I	TTAA	5 cut(s)	243, 594, 641, 1038, 1191
TscAI	CASTG	7 cut(s)	81, 87, 529, 553, 626, 1167, 1234
TseFI	GTSAC	5 cut(s)	78, 499, 548, 726, 1162
TseI	GCWGC	2 cut(s)	6, 375
Tsp45I	GTSAC	5 cut(s)	78, 499, 548, 726, 1162
TspDTI	ATGAA	7 cut(s)	119, 522, 659, 777, 905, 1049, 1191
TspRI	CASTG	7 cut(s)	81, 87, 529, 553, 626, 1167, 1234
Tth111I	GACNNNGTC	1 cut(s)	1028
Van91I	CCANNNNNTGG	2 cut(s)	621, 862
Vha464I	CTTAAG	1 cut(s)	242
VpaK11BI	GGWCC	4 cut(s)	47, 247, 953, 1140
XapI	RAATTY	1 cut(s)	206
XmnI	GAANNNNTTC	2 cut(s)	666, 1245
XspI	CTAG	3 cut(s)	63, 485, 1113
ZraI	GACGTC	1 cut(s)	647

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.