AT1G77180

SKIP/SNW domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0010126
Physical Location & Seq
Reverse (-)
28999577 .. 29002143
2567 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G77180.2

Sequence Viewer

Length: 1842 bp
ATGAAGTCTCTTAATGATCTTCCTGCGCCCAAATCAACCACTACCACGTATTATGATCATTCTAATGATGCTTGGTTCAAAAACCGAGTCACTGAATCCGAGACGGTGAAATCCTCCAGTATCAAATTTAAAGTGGTGCCTGCTTACCTGAATCGTCAAGGTTTACGTCCGAAGAATCCAGAGGATTTTGGCGATGGTGGTGCTTTCCCGGAGATTCATCTTCCTCAGTATCCTCTTCTTATGGGTAAGAATAAATCCAATAAGCCTGGAGCTAAGACTCTCCCTGTTACTGTCGATGCTCAGGGAAACGTGGTCTTTGACGCTATAGTGAGGCAGAATGAGAACTCGAGGAAGATTGTTTATTCTCAGCATAAGGATATTATTCCAAAGTTTCTGAAAAACGAGGGAGACTTGGGTACTGTTGTTGATGAAGAGGAGGAATTGCAGAAGGAGATTCAGGAGACTGCTGAAGAAACGAAAGCTGCCATTGAGAAGATTGTGAATGTGAGACTGAGTGCAGCGCAGCCTAGTAATATAGCAAGGCAATCGGGAGATTCACAGTACATTAAATATAAGCCATCCCAGCAATCTTCTGCCTTCAATTCTGGTGCTAAAGAGAGGATCATTAGGATGGTGGAGATGCCTGTAGATCCACTTGATCCACCAAAGTTCAAGCACAAGAGAGTCCCAAGGGCTTCTGGTTCTCCGCCTGTTCCGGTCATGCATTCACCGCCCAGGCCTGTTACCGTCAAGGACCAGCAAGACTGGAAAATCCCTCCTTGTATCTCCAATTGGAAGAATCCGAAAGGTTACACAATCCCTCTTGACAAACGTCTAGCTGCTGATGGAAGGGGCCTACAAGACGTTCAGATCAATGATAACTTTGCCAAGTTATCAGAGGCCCTCTATGTAGCTGAGCAGAAAGCTAGAGAGGCTGTTTCAATGCGTTCCAAGGTGCAAAAAGAGATGGTGATGAAGGACAAGGAAAGGAAAGAGCAGGAATTGAGGGCTCTTGCCCAAAAAGCTCGCTCCGAAAGAACCGGTGCTGCTATGAGTATGCCTGTCTCATCTGACAGGGGTAGGAGTGAAAGTGTTGACCCAAGAGGTGATTATGACAACTATGACCAGGATAGAGGAAGGGAAAGAGAAAGGGAAGAGCCTCAAGAGACGAGGGAGGAGAGGGAAAAAAGGATTCAGAGAGAAAAGATACGAGAAGAGCGTCGCAGGGAAAGAGAGAGGGAGAGAAGGTTGGATGCCAAAGATGCTGCCATGGGGAAGAAGAGCAAGATCACCAGAGACAGAGACCGTGACATCAGTGAGAAAGTTGCTCTTGGAATGGCATCTACTGGAGGAAAAGGTGGTGGTGAAGTTATGTATGATCAACGTCTGTTTAACCAAGACAAAGGAATGGACTCTGGTTTCGCTGCTGATGACCAATACAACTTATACGACAAAGGCTTGTTCACTGCACAACCAACTCTTTCGACTTTGTACAAGCCAAAGAAGGATAACGATGAAGAAATGTATGGAAACGCTGATGAGCAGCTCGATAAGATCAAGAATACTGAGAGGTTTAAGCCTGACAAAGCTTTCACAGGGGCTTCAGAGAGGGTGGGTAGTAAGAGAGACCGACCTGTTGAGTTTGAGAAGGAAGAGGAACAAGATCCTTTCGGTCTTGAGAAGTGGGTTTCTGATTTAAAGAAGGGTAAGAAACCTTTGGACAAGATCGGGTCTGGTGGAACTATGAGAGCAAGTGGCGGTGGTGGTAGCTCTTCAAGGGACGATGACCACGGCGGTTCTGGTCGAACCAAGATCAATTTCGAACGCAGTGACCGGCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000350 GO:0000375 GO:0000377 GO:0000393 GO:0000398 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003712 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010555 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033993 GO:0034622 GO:0034641 GO:0036002 GO:0042221 GO:0042752 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0048580 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051239 GO:0051252 GO:0051254 GO:0060255 GO:0061458 GO:0065003 GO:0065007 GO:0070013 GO:0071013 GO:0071014 GO:0071141 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097305 GO:0140110 GO:1901360 GO:1901363 GO:1901700 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03040 ko04330 ko05169 ko05203 map03040 map04330 map05169 map05203
Pfam Domains
Protein Families
SKIP_SNW

Protein Analysis

613

Amino Acids

69.42

Weight (kDa)

9.18

Isoelectric Point (pI)

49.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SKIP_SNW PF02731 187 - 346 8.1e-74 SKIP/SNW domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G77180 AT1G77180 AT1G77180
fragaria_vesca FvH4_1g05870 FvH4_1g05870
malus_domestica MD02G1060800.v1.1 MD15G1194300.v1.1
prunus_persica Prupe.6G190500_v2.0.a1
pyrus_communis pycom02g04990 pycom15g17390
rosa_chinensis RchiOBHm_Chr2g0091531 RchiOBHm_Chr2g0091611
rosa_laevigata RLG00000016233
rosa_multiflora Rmu_sc0002407.1_g000004
rosa_roxburghii Rroxscaffold_2G00149960
rosa_rugosa Rorug02G0018500
rosa_samantha Rh2AG063700 Rh2BG063100 Rh2CG064800 Rh2DG063200
rosa_wichuraiana Rw2G005670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 136
AciI CCGC 4 cut(s) 707, 731, 1758, 1794
AclWI GGATC 4 cut(s) 629, 644, 653, 1658
AcsI RAATTY 1 cut(s) 125
AcuI CTGAAG 2 cut(s) 489, 1587
AfaI GTAC 3 cut(s) 418, 563, 1493
AgeI ACCGGT 1 cut(s) 1040
AgsI TTSAA 5 cut(s) 79, 601, 673, 942, 1776
AjnI CCWGG 3 cut(s) 265, 734, 1125
AjuI GAANNNNNNNTTGG 2 cut(s) 1802, 1834
AluBI AGCT 9 cut(s) 272, 482, 839, 914, 926, 1025, 1546, 1589, 1770
AluI AGCT 9 cut(s) 272, 482, 839, 914, 926, 1025, 1546, 1589, 1770
AlwI GGATC 4 cut(s) 629, 644, 653, 1658
Ama87I CYCGRG 1 cut(s) 346
AoxI GGCC 3 cut(s) 737, 853, 900
ApeKI GCWGC 8 cut(s) 482, 518, 523, 839, 1046, 1265, 1424, 1543
ApoI RAATTY 1 cut(s) 125
ArsI GACNNNNNNTTYG 4 cut(s) 72, 104, 1403, 1435
AsiGI ACCGGT 1 cut(s) 1040
AspLEI GCGC 2 cut(s) 28, 523
AspS9I GGNCC 3 cut(s) 754, 853, 901
AsuC2I CCSGG 1 cut(s) 209
AsuHPI GGTGA 6 cut(s) 118, 720, 982, 1118, 1282, 1376
AsuII TTCGAA 1 cut(s) 1821
AvaI CYCGRG 1 cut(s) 346
AvaII GGWCC 1 cut(s) 754
BaeI ACNNNNGTAYC 2 cut(s) 408, 441
BanI GGYRCC 1 cut(s) 136
BanII GRGCYC 1 cut(s) 1012
BbvI GCAGC 8 cut(s) 469, 530, 535, 826, 1033, 1252, 1411, 1555
BccI CCATC 5 cut(s) 188, 586, 625, 839, 961
BceAI ACGGC 1 cut(s) 1807
BcgI CGANNNNNNTGC 4 cut(s) 182, 216, 528, 562
BciT130I CCWGG 3 cut(s) 267, 736, 1127
BciVI GTATCC 1 cut(s) 240
BclI TGATCA 2 cut(s) 55, 1378
BcnI CCSGG 1 cut(s) 209
BfaI CTAG 3 cut(s) 528, 836, 927
BfmI CTRYAG 2 cut(s) 324, 645
BfuI GTATCC 1 cut(s) 240
BisI GCNGC 8 cut(s) 483, 519, 524, 840, 1047, 1266, 1425, 1544
BlpI GCTNAGC 1 cut(s) 915
BlsI GCNGC 8 cut(s) 484, 520, 525, 841, 1048, 1267, 1426, 1545
Bme1390I CCNGG 4 cut(s) 209, 267, 736, 1127
Bme18I GGWCC 1 cut(s) 754
BmeT110I CYCGRG 1 cut(s) 346
BmgT120I GGNCC 3 cut(s) 754, 853, 901
BmiI GGNNCC 2 cut(s) 138, 854
BmrFI CCNGG 4 cut(s) 209, 267, 736, 1127
BmsI GCATC 6 cut(s) 58, 286, 630, 1243, 1252, 1349
BoxI GACNNNNGTC 1 cut(s) 831
BpmI CTGGAG 3 cut(s) 100, 288, 1368
Bpu10I CCTNAGC 1 cut(s) 300
Bpu1102I GCTNAGC 1 cut(s) 915
Bpu14I TTCGAA 1 cut(s) 1821
BpuEI CTTGAG 2 cut(s) 1146, 1697
BpuMI CCSGG 1 cut(s) 209
BsaAI YACGTR 1 cut(s) 48
BsaI GGTCTC 2 cut(s) 1296, 1620
BsaJI CCNNGG 5 cut(s) 689, 734, 951, 1269, 1789
BsaWI WCCGGW 2 cut(s) 715, 1040
BsaXI ACNNNNNCTCC 4 cut(s) 1075, 1105, 1232, 1262
Bse118I RCCGGY 2 cut(s) 1040, 1833
Bse1I ACTGG 3 cut(s) 117, 770, 1351
BseBI CCWGG 3 cut(s) 267, 736, 1127
BseDI CCNNGG 5 cut(s) 689, 734, 951, 1269, 1789
BseGI GGATG 3 cut(s) 578, 636, 1258
BseMII CTCAG 6 cut(s) 239, 314, 380, 503, 906, 1557
BseNI ACTGG 3 cut(s) 117, 770, 1351
BseRI GAGGAG 2 cut(s) 449, 1190
BseXI GCAGC 8 cut(s) 469, 530, 535, 826, 1033, 1252, 1411, 1555
BseYI CCCAGC 1 cut(s) 582
BsgI GTGCAG 2 cut(s) 537, 1452
BshFI GGCC 3 cut(s) 739, 855, 902
BshNI GGYRCC 1 cut(s) 136
BshTI ACCGGT 1 cut(s) 1040
BsiHKCI CYCGRG 1 cut(s) 346
BsiSI CCGG 4 cut(s) 209, 716, 1041, 1834
BslFI GGGAC 2 cut(s) 671, 1793
BsmBI CGTCTC 2 cut(s) 95, 1160
BsmFI GGGAC 2 cut(s) 671, 1793
BsmI GAATGC 1 cut(s) 724
BsnI GGCC 3 cut(s) 739, 855, 902
Bso31I GGTCTC 2 cut(s) 1296, 1620
BsoBI CYCGRG 1 cut(s) 346
Bsp119I TTCGAA 1 cut(s) 1821
Bsp1286I GDGCHC 1 cut(s) 1012
Bsp1407I TGTACA 1 cut(s) 1491
Bsp1720I GCTNAGC 1 cut(s) 915
Bsp19I CCATGG 1 cut(s) 1269
BspACI CCGC 4 cut(s) 707, 731, 1758, 1794
BspANI GGCC 3 cut(s) 739, 855, 902
BspCNI CTCAG 6 cut(s) 238, 313, 379, 504, 907, 1558
BspLI GGNNCC 2 cut(s) 138, 854
BspPI GGATC 4 cut(s) 629, 644, 653, 1658
BspQI GCTCTTC 4 cut(s) 1149, 1209, 1274, 1777
BspT104I TTCGAA 1 cut(s) 1821
BspT107I GGYRCC 1 cut(s) 136
BspTNI GGTCTC 2 cut(s) 1296, 1620
BsrFI RCCGGY 2 cut(s) 1040, 1833
BsrGI TGTACA 1 cut(s) 1491
BsrI ACTGG 3 cut(s) 117, 770, 1351
BssAI RCCGGY 2 cut(s) 1040, 1833
BssECI CCNNGG 5 cut(s) 689, 734, 951, 1269, 1789
BssT1I CCWWGG 3 cut(s) 689, 951, 1269
Bst2UI CCWGG 3 cut(s) 267, 736, 1127
Bst4CI ACNGT 6 cut(s) 106, 292, 421, 561, 748, 1307
Bst6I CTCTTC 7 cut(s) 240, 426, 1149, 1209, 1274, 1647, 1777
BstAUI TGTACA 1 cut(s) 1491
BstBAI YACGTR 1 cut(s) 48
BstBI TTCGAA 1 cut(s) 1821
BstC8I GCNNGC 2 cut(s) 141, 1027
BstDEI CTNAG 7 cut(s) 225, 273, 300, 366, 512, 915, 1566
BstDSI CCRYGG 2 cut(s) 1269, 1789
BstF5I GGATG 3 cut(s) 578, 636, 1258
BstHHI GCGC 2 cut(s) 28, 523
BstMWI GCNNNNNNNGC 5 cut(s) 583, 730, 932, 1022, 1262
BstNI CCWGG 3 cut(s) 267, 736, 1127
BstPAI GACNNNNGTC 1 cut(s) 831
BstSCI CCNGG 4 cut(s) 207, 265, 734, 1125
BstSFI CTRYAG 2 cut(s) 324, 645
BstV1I GCAGC 8 cut(s) 469, 530, 535, 826, 1033, 1252, 1411, 1555
BstX2I RGATCY 2 cut(s) 649, 1663
BstYI RGATCY 2 cut(s) 649, 1663
BsuI GTATCC 1 cut(s) 240
BsuRI GGCC 3 cut(s) 739, 855, 902
BtgI CCRYGG 2 cut(s) 1269, 1789
BtgZI GCGATG 1 cut(s) 207
BtsCI GGATG 3 cut(s) 578, 636, 1258
BtsI GCAGTG 2 cut(s) 1464, 1834
BtsIMutI CAGTG 4 cut(s) 90, 1321, 1464, 1834
Cac8I GCNNGC 2 cut(s) 141, 1027
CfoI GCGC 2 cut(s) 28, 523
Cfr10I RCCGGY 2 cut(s) 1040, 1833
Cfr13I GGNCC 3 cut(s) 754, 853, 901
CseI GACGC 2 cut(s) 329, 1208
Csp6I GTAC 3 cut(s) 417, 562, 1492
CspAI ACCGGT 1 cut(s) 1040
CviAII CATG 2 cut(s) 721, 1270
CviQI GTAC 3 cut(s) 417, 562, 1492
DdeI CTNAG 7 cut(s) 225, 273, 300, 366, 512, 915, 1566
DraI TTTAAA 2 cut(s) 130, 1698
Eam1104I CTCTTC 7 cut(s) 240, 426, 1149, 1209, 1274, 1647, 1777
EarI CTCTTC 7 cut(s) 240, 426, 1149, 1209, 1274, 1647, 1777
EciI GGCGGA 1 cut(s) 696
Eco130I CCWWGG 3 cut(s) 689, 951, 1269
Eco147I AGGCCT 1 cut(s) 739
Eco24I GRGCYC 1 cut(s) 1012
Eco31I GGTCTC 2 cut(s) 1296, 1620
Eco47I GGWCC 1 cut(s) 754
Eco57I CTGAAG 2 cut(s) 489, 1587
Eco88I CYCGRG 1 cut(s) 346
EcoO109I RGGNCCY 2 cut(s) 853, 901
EcoRII CCWGG 3 cut(s) 265, 734, 1125
EcoT14I CCWWGG 3 cut(s) 689, 951, 1269
EcoT22I ATGCAT 1 cut(s) 726
EcoT38I GRGCYC 1 cut(s) 1012
ErhI CCWWGG 3 cut(s) 689, 951, 1269
Esp3I CGTCTC 2 cut(s) 95, 1160
FaeI CATG 2 cut(s) 724, 1273
FalI AAGNNNNNCTT 2 cut(s) 1314, 1346
FaqI GGGAC 2 cut(s) 671, 1793
FatI CATG 2 cut(s) 720, 1269
FbaI TGATCA 2 cut(s) 55, 1378
Fnu4HI GCNGC 8 cut(s) 483, 519, 524, 840, 1047, 1266, 1425, 1544
FokI GGATG 3 cut(s) 565, 643, 1265
FriOI GRGCYC 1 cut(s) 1012
Fsp4HI GCNGC 8 cut(s) 483, 519, 524, 840, 1047, 1266, 1425, 1544
FspBI CTAG 3 cut(s) 528, 836, 927
GlaI GCGC 2 cut(s) 27, 522
GluI GCNGC 8 cut(s) 483, 519, 524, 840, 1047, 1266, 1425, 1544
GsaI CCCAGC 1 cut(s) 586
GsuI CTGGAG 3 cut(s) 100, 288, 1368
HaeIII GGCC 3 cut(s) 739, 855, 902
HapII CCGG 4 cut(s) 209, 716, 1041, 1834
HgaI GACGC 2 cut(s) 329, 1208
HhaI GCGC 2 cut(s) 28, 523
Hin1II CATG 2 cut(s) 724, 1273
Hin6I GCGC 2 cut(s) 26, 521
HinP1I GCGC 2 cut(s) 26, 521
HincII GTYRAC 1 cut(s) 1096
HindII GTYRAC 1 cut(s) 1096
HindIII AAGCTT 1 cut(s) 1587
HpaII CCGG 4 cut(s) 209, 716, 1041, 1834
HphI GGTGA 6 cut(s) 118, 720, 982, 1118, 1282, 1376
Hpy166II GTNNAC 3 cut(s) 164, 1096, 1464
Hpy188III TCNNGA 7 cut(s) 179, 458, 549, 824, 1163, 1558, 1676
Hpy8I GTNNAC 3 cut(s) 164, 1096, 1464
Hpy99I CGWCG 1 cut(s) 1224
HpyAV CCTTC 9 cut(s) 442, 607, 843, 970, 1131, 1239, 1498, 1642, 1696
HpyCH4III ACNGT 6 cut(s) 106, 292, 421, 561, 748, 1307
HpyCH4IV ACGT 6 cut(s) 47, 166, 309, 832, 864, 1384
HpyCH4V TGCA 5 cut(s) 445, 518, 724, 958, 1469
HpyF10VI GCNNNNNNNGC 5 cut(s) 583, 730, 932, 1022, 1262
HpyF3I CTNAG 7 cut(s) 225, 273, 300, 366, 512, 915, 1566
HpySE526I ACGT 6 cut(s) 47, 166, 309, 832, 864, 1384
Hsp92II CATG 2 cut(s) 724, 1273
HspAI GCGC 2 cut(s) 26, 521
Ksp22I TGATCA 2 cut(s) 55, 1378
LguI GCTCTTC 4 cut(s) 1149, 1209, 1274, 1777
LmnI GCTCC 2 cut(s) 269, 1034
Lsp1109I GCAGC 8 cut(s) 469, 530, 535, 826, 1033, 1252, 1411, 1555
LweI GCATC 6 cut(s) 58, 286, 630, 1243, 1252, 1349
MaeI CTAG 3 cut(s) 528, 836, 927
MaeII ACGT 6 cut(s) 47, 166, 309, 832, 864, 1384
MaeIII GTNAC 6 cut(s) 88, 286, 742, 809, 1307, 1829
MfeI CAATTG 1 cut(s) 790
MflI RGATCY 2 cut(s) 649, 1663
MhlI GDGCHC 1 cut(s) 1012
MluCI AATT 6 cut(s) 125, 440, 601, 790, 1001, 1816
MlyI GAGTC 4 cut(s) 96, 271, 693, 1406
MmeI TCCRAC 1 cut(s) 1230
Mph1103I ATGCAT 1 cut(s) 726
MseI TTAA 7 cut(s) 12, 129, 567, 1392, 1575, 1697, 1840
MslI CAYNNNNRTG 2 cut(s) 63, 629
MspI CCGG 4 cut(s) 209, 716, 1041, 1834
MspR9I CCNGG 4 cut(s) 209, 267, 736, 1127
MunI CAATTG 1 cut(s) 790
Mva1269I GAATGC 1 cut(s) 724
MvaI CCWGG 3 cut(s) 267, 736, 1127
MwoI GCNNNNNNNGC 5 cut(s) 583, 730, 932, 1022, 1262
NciI CCSGG 1 cut(s) 209
NcoI CCATGG 1 cut(s) 1269
NlaIII CATG 2 cut(s) 724, 1273
NlaIV GGNNCC 2 cut(s) 138, 854
NmuCI GTSAC 3 cut(s) 88, 1307, 1829
NsiI ATGCAT 1 cut(s) 726
NspV TTCGAA 1 cut(s) 1821
PaeR7I CTCGAG 1 cut(s) 346
PceI AGGCCT 1 cut(s) 739
PciSI GCTCTTC 4 cut(s) 1149, 1209, 1274, 1777
PcsI WCGNNNNNNNCGW 1 cut(s) 1216
PctI GAATGC 1 cut(s) 724
PfeI GAWTC 8 cut(s) 95, 151, 175, 214, 454, 554, 799, 1192
PfoI TCCNGGA 1 cut(s) 207
PinAI ACCGGT 1 cut(s) 1040
PkrI GCNGC 8 cut(s) 484, 520, 525, 841, 1048, 1267, 1426, 1545
PleI GAGTC 4 cut(s) 95, 271, 692, 1406
PpsI GAGTC 4 cut(s) 95, 271, 692, 1406
Ppu21I YACGTR 1 cut(s) 48
PshAI GACNNNNGTC 1 cut(s) 831
Psp6I CCWGG 3 cut(s) 265, 734, 1125
PspFI CCCAGC 1 cut(s) 582
PspGI CCWGG 3 cut(s) 265, 734, 1125
PspN4I GGNNCC 2 cut(s) 138, 854
PspPI GGNCC 3 cut(s) 754, 853, 901
PspXI VCTCGAGB 1 cut(s) 346
PsuI RGATCY 2 cut(s) 649, 1663
RsaI GTAC 3 cut(s) 418, 563, 1493
RsaNI GTAC 3 cut(s) 417, 562, 1492
RseI CAYNNNNRTG 2 cut(s) 63, 629
SapI GCTCTTC 4 cut(s) 1149, 1209, 1274, 1777
SaqAI TTAA 7 cut(s) 12, 129, 567, 1392, 1575, 1697, 1840
SatI GCNGC 8 cut(s) 483, 519, 524, 840, 1047, 1266, 1425, 1544
Sau96I GGNCC 3 cut(s) 754, 853, 901
SchI GAGTC 4 cut(s) 96, 271, 693, 1406
ScrFI CCNGG 4 cut(s) 209, 267, 736, 1127
SduI GDGCHC 1 cut(s) 1012
SfaNI GCATC 6 cut(s) 58, 286, 630, 1243, 1252, 1349
SfcI CTRYAG 2 cut(s) 324, 645
Sfr274I CTCGAG 1 cut(s) 346
SfuI TTCGAA 1 cut(s) 1821
SinI GGWCC 1 cut(s) 754
SlaI CTCGAG 1 cut(s) 346
SmiMI CAYNNNNRTG 2 cut(s) 63, 629
SmlI CTYRAG 3 cut(s) 346, 1161, 1676
SmoI CTYRAG 3 cut(s) 346, 1161, 1676
Sse9I AATT 6 cut(s) 125, 440, 601, 790, 1001, 1816
SseBI AGGCCT 1 cut(s) 739
SsiI CCGC 4 cut(s) 707, 731, 1758, 1794
SspMI CTAG 3 cut(s) 528, 836, 927
StuI AGGCCT 1 cut(s) 739
StyD4I CCNGG 4 cut(s) 207, 265, 734, 1125
StyI CCWWGG 3 cut(s) 689, 951, 1269
TaaI ACNGT 6 cut(s) 106, 292, 421, 561, 748, 1307
TaiI ACGT 6 cut(s) 50, 169, 312, 835, 867, 1387
TaqI TCGA 6 cut(s) 294, 347, 1484, 1548, 1804, 1821
TaqII GACCGA 2 cut(s) 1644, 1661
TasI AATT 6 cut(s) 125, 440, 601, 790, 1001, 1816
TatI WGTACW 2 cut(s) 561, 1491
TfiI GAWTC 8 cut(s) 95, 151, 175, 214, 454, 554, 799, 1192
Tru1I TTAA 7 cut(s) 12, 129, 567, 1392, 1575, 1697, 1840
Tru9I TTAA 7 cut(s) 12, 129, 567, 1392, 1575, 1697, 1840
TscAI CASTG 4 cut(s) 97, 1321, 1471, 1834
TseFI GTSAC 3 cut(s) 88, 1307, 1829
TseI GCWGC 8 cut(s) 482, 518, 523, 839, 1046, 1265, 1424, 1543
Tsp45I GTSAC 3 cut(s) 88, 1307, 1829
TspDTI ATGAA 5 cut(s) 17, 206, 444, 989, 1530
TspRI CASTG 4 cut(s) 97, 1321, 1471, 1834
VpaK11BI GGWCC 1 cut(s) 754
XapI RAATTY 1 cut(s) 125
XcmI CCANNNNNNNNNTGG 1 cut(s) 1796
XhoI CTCGAG 1 cut(s) 346
XspI CTAG 3 cut(s) 528, 836, 927
Zsp2I ATGCAT 1 cut(s) 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.