FvH4_1g05870

SNW SKI-interacting

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0010126
Physical Location & Seq
Forward (+)
3121167 .. 3123689
2523 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g05870.t2

Sequence Viewer

Length: 1827 bp
ATGGCGGCTCTGAAGGAGCTTCTTCCGCCAGCGAAATCGACCGCGACTACTTATTATGACCACTCGAACGATCCGTGGTTCAAGCAGCGGTTCAGTGCAGCTGCCGAGGCCGAAAAGGCTGTTGTGGTGAAGGCCAAGCCTGTGCCTCCGTACCAGAAGCGTCAAGGTTTTGTTCCGAGGAAGGTGGAGGACTTTGGAGATGGAGGGGCGTTTCCAGAGATTCATATTGCGCAGTATCCGCTTGGGATGGGGAGGGACAGGTTGGGGAAGCCTGGGAGTAAGGTTCTTCCGGTGACGGTTGATTCGAGGGGGAATATTTCGTATGATGCGATTGTTAAGCAGAATGAGAATTCGAGGAAGATTGTGTATTCCCAGCATAAGGATATTGTGCCGAAGATTTTGAAGAATGAGGAGGATATGATGAGTGATGAGGAGGACGAGGAGTTGCAGAAGGAGATTGAAGAGACCACAGCGGAGACGAAAGCTGCGCTTGAGAAGATTGTGAATGTGAGATTGAGTGCTGCGCAGCCGAAGAATGTGGCCACGCAATCGTCGGATTCGAAGTTTATCAAGTATAAGCCATCTCAGAAGTCGTTGGCTTTTAATTCTGGTGCCAAGGAGAGGATTATTAGGATGGTGGAGATGCCTGTTGACCCACTTGAGCCTCCTAAGTTCAAGCATAAGCGTGTTCCAAGGGCATCCGGGTCCCCACCTGTGCCTGTCCTGCATTCCCCTCCTCGGCCAGTGTCTGTGAAAGACCAGCAGGATTGGAAGATTCCGCCTTGCATTTCAAACTGGAAGAATCCAAAAGGGTATACAATCCCATTGGACAAACGTCTGGCTGCTGATGGGAGAGGCCTCCAAGATGTTCAGATTAATGATAACTTTGCCAAGCTTTCCGAGTCTTTGTATGTAGCAGAGCAGAAGGCTAGGGATGCAGTTGAATTAAGATCTAAAGTTCAGAGGGAGATGATGCAGAAGGAGAAGGATAGGAAAGAGCAGGAGCTGCGGGCCTTAGCTCAGAAAGCTCGTTCTGAGAGAACAGGAGCAGCACCCCCACCTTCCTTTCCAATGCCTTCTGAGAGAGCGGGCATGGATACTGATAGAAGAGGGGATTATGACCGTTCGAGGGAAAAGGAGATGGATTACCCAAAGGAGACAAGGGAGGAGAAAGAGCAGAGGTTGCAGCGGGAGAAGATCCGTGAGGAGCGACGCCGAGAGAGGGAAAGGGAGAGAAGGTTGGAAGCCAAAGATGCTGCAATGGGAAAGAAGAGTAAAATTACAAGAGATAGGGACCGTGATGTTAGTGAGAAAGTTGCCCTTGGCCAGGCTAATGGTGGAGCAGGAAGAGGGGGAGAGGTTATGTATGACCAGAGGCTGTTCAACCAGGAGAAGGGAATGGACTCTGGGTTTGCTACTGATGACCAGTACAATGTTTATGACAAGGGCTTGTTCACTGCTCAGCCTACCTTGTCCACTTTATACAGGCCAAAGAAGGATACCGATGCTGAGATGTATGGAGGGGCTGATGAGCAATTGGATAAGATTATGAAGACTGATCGCTTTAAACCGGACAAAGGATTCTCAGGAGCTTCTGAGAAGGCTGGTGGTCGGAGAGAGGGACCAGTTGAATTTGAGAAGGATGCTGAAGAAGCTGATCCATTTGGTCTCGACCGGTTTATGGTAAATGTAAAGACAGGCCAGAAGGCCATGGCAAAAATTGGCAAAGGAGGGACAATGAATGCAACTGCTGGGTCTTCAATGCGAGATAGCTCTGATACGGGTTCCGGGAGAAGCCGTATTGGGTTCGAAAGGGGGAGTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000122 GO:0000350 GO:0000375 GO:0000377 GO:0000393 GO:0000398 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003712 GO:0003713 GO:0003714 GO:0003723 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006970 GO:0006974 GO:0007154 GO:0007165 GO:0007275 GO:0007399 GO:0008134 GO:0008150 GO:0008152 GO:0008219 GO:0008380 GO:0008630 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010555 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0010646 GO:0010647 GO:0010720 GO:0012501 GO:0016043 GO:0016070 GO:0016071 GO:0016363 GO:0017015 GO:0019219 GO:0019222 GO:0022008 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0030511 GO:0030522 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032101 GO:0032104 GO:0032107 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033120 GO:0033554 GO:0033993 GO:0034399 GO:0034622 GO:0034641 GO:0035257 GO:0035556 GO:0036002 GO:0042221 GO:0042752 GO:0042771 GO:0042809 GO:0042974 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045595 GO:0045597 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046332 GO:0046483 GO:0048024 GO:0048026 GO:0048384 GO:0048385 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048584 GO:0048608 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050684 GO:0050685 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0051254 GO:0051427 GO:0051569 GO:0051571 GO:0051716 GO:0051960 GO:0051962 GO:0060255 GO:0060284 GO:0061458 GO:0065003 GO:0065007 GO:0070013 GO:0070562 GO:0071007 GO:0071013 GO:0071014 GO:0071141 GO:0071704 GO:0071826 GO:0071840 GO:0072331 GO:0072332 GO:0080090 GO:0090092 GO:0090100 GO:0090287 GO:0090304 GO:0097159 GO:0097190 GO:0097193 GO:0097305 GO:0140110 GO:1901360 GO:1901363 GO:1901700 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903507 GO:1903508 GO:1903844 GO:1903846 GO:1905269 GO:1990904 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03040 ko04330 ko05169 ko05203 map03040 map04330 map05169 map05203
Pfam Domains
Protein Families
SKIP_SNW

Protein Analysis

609

Amino Acids

68.44

Weight (kDa)

9.31

Isoelectric Point (pI)

46.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SKIP_SNW PF02731 188 - 347 7.6e-72 SKIP/SNW domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G77180 AT1G77180 AT1G77180
fragaria_vesca FvH4_1g05870 FvH4_1g05870
malus_domestica MD02G1060800.v1.1 MD15G1194300.v1.1
prunus_persica Prupe.6G190500_v2.0.a1
pyrus_communis pycom02g04990 pycom15g17390
rosa_chinensis RchiOBHm_Chr2g0091531 RchiOBHm_Chr2g0091611
rosa_laevigata RLG00000016233
rosa_multiflora Rmu_sc0002407.1_g000004
rosa_roxburghii Rroxscaffold_2G00149960
rosa_rugosa Rorug02G0018500
rosa_samantha Rh2AG063700 Rh2BG063100 Rh2CG064800 Rh2DG063200
rosa_wichuraiana Rw2G005670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 231, 525
AccB1I GGYRCC 1 cut(s) 611
AccBSI CCGCTC 1 cut(s) 1088
AccI GTMKAC 1 cut(s) 815
AccII CGCG 1 cut(s) 44
AclWI GGATC 3 cut(s) 65, 1192, 1652
AcoI YGGCCR 3 cut(s) 540, 740, 1324
AcsI RAATTY 2 cut(s) 349, 1631
AcuI CTGAAG 2 cut(s) 32, 1668
AcyI GRCGYC 1 cut(s) 1213
AfaI GTAC 2 cut(s) 152, 1430
AfiI CCNNNNNNNGG 9 cut(s) 379, 621, 738, 1129, 1222, 1327, 1393, 1577, 1681
AgeI ACCGGT 1 cut(s) 1674
AgsI TTSAA 9 cut(s) 82, 403, 461, 676, 792, 944, 1384, 1631, 1761
AjnI CCWGG 3 cut(s) 271, 1326, 1386
Alw26I GTCTC 4 cut(s) 458, 470, 1151, 1673
AlwI GGATC 3 cut(s) 65, 1192, 1652
AlwNI CAGNNNCTG 3 cut(s) 749, 1006, 1378
ApoI RAATTY 2 cut(s) 349, 1631
ArsI GACNNNNNNTTYG 4 cut(s) 286, 318, 1394, 1426
AseI ATTAAT 1 cut(s) 876
AsiGI ACCGGT 1 cut(s) 1674
AspLEI GCGC 3 cut(s) 232, 490, 526
AspS9I GGNCC 4 cut(s) 705, 1011, 1294, 1622
AsuC2I CCSGG 2 cut(s) 703, 1789
AsuHPI GGTGA 2 cut(s) 139, 304
AsuII TTCGAA 2 cut(s) 560, 1809
AvaII GGWCC 3 cut(s) 705, 1294, 1622
BalI TGGCCA 2 cut(s) 542, 1326
BanI GGYRCC 1 cut(s) 611
BbsI GAAGAC 2 cut(s) 1559, 1749
BccI CCATC 6 cut(s) 194, 241, 589, 628, 842, 1135
BceAI ACGGC 1 cut(s) 1782
BciT130I CCWGG 3 cut(s) 273, 1328, 1388
BciVI GTATCC 3 cut(s) 246, 1090, 1492
BcnI CCSGG 2 cut(s) 703, 1789
BcoDI GTCTC 4 cut(s) 458, 470, 1151, 1673
BfaI CTAG 1 cut(s) 930
BfuI GTATCC 3 cut(s) 246, 1090, 1492
BglI GCCNNNNNGGC 1 cut(s) 116
BglII AGATCT 1 cut(s) 950
BlpI GCTNAGC 1 cut(s) 1461
Bme1390I CCNGG 5 cut(s) 273, 703, 1328, 1388, 1789
Bme18I GGWCC 3 cut(s) 705, 1294, 1622
BmgT120I GGNCC 4 cut(s) 705, 1011, 1294, 1622
BmiI GGNNCC 6 cut(s) 613, 706, 707, 1295, 1623, 1786
BmrFI CCNGG 5 cut(s) 273, 703, 1328, 1388, 1789
BmsI GCATC 8 cut(s) 316, 633, 707, 925, 963, 1243, 1495, 1633
BoxI GACNNNNGTC 1 cut(s) 834
BpiI GAAGAC 2 cut(s) 1559, 1749
Bpu10I CCTNAGC 1 cut(s) 1015
Bpu1102I GCTNAGC 1 cut(s) 1461
Bpu14I TTCGAA 2 cut(s) 560, 1809
BpuEI CTTGAG 2 cut(s) 512, 680
BpuMI CCSGG 2 cut(s) 703, 1789
BsaHI GRCGYC 1 cut(s) 1213
BsaI GGTCTC 2 cut(s) 458, 1673
BsaJI CCNNGG 9 cut(s) 74, 105, 176, 272, 615, 692, 737, 1321, 1710
BsaWI WCCGGW 3 cut(s) 289, 1570, 1674
BsaXI ACNNNNNCTCC 4 cut(s) 1223, 1253, 1783, 1813
Bsc4I CCNNNNNNNGG 9 cut(s) 379, 621, 738, 1129, 1222, 1327, 1393, 1577, 1681
Bse118I RCCGGY 1 cut(s) 1674
Bse1I ACTGG 4 cut(s) 743, 800, 1426, 1625
Bse3DI GCAATG 1 cut(s) 1266
BseBI CCWGG 3 cut(s) 273, 1328, 1388
BseDI CCNNGG 9 cut(s) 74, 105, 176, 272, 615, 692, 737, 1321, 1710
BseGI GGATG 5 cut(s) 252, 639, 698, 940, 1648
BseLI CCNNNNNNNGG 9 cut(s) 379, 621, 738, 1129, 1222, 1327, 1393, 1577, 1681
BseMI GCAATG 1 cut(s) 1266
BseMII CTCAG 8 cut(s) 599, 1026, 1034, 1071, 1475, 1500, 1587, 1599
BseNI ACTGG 4 cut(s) 743, 800, 1426, 1625
BseRI GAGGAG 6 cut(s) 425, 446, 455, 726, 1181, 1220
BseYI CCCAGC 2 cut(s) 372, 1751
BsgI GTGCAG 1 cut(s) 117
Bsh1236I CGCG 1 cut(s) 44
Bsh1285I CGRYCG 2 cut(s) 42, 1675
BshNI GGYRCC 1 cut(s) 611
BshTI ACCGGT 1 cut(s) 1674
BsiEI CGRYCG 2 cut(s) 42, 1675
BsiSI CCGG 5 cut(s) 290, 702, 1571, 1675, 1788
BslFI GGGAC 5 cut(s) 269, 691, 1307, 1635, 1747
BslI CCNNNNNNNGG 9 cut(s) 379, 621, 738, 1129, 1222, 1327, 1393, 1577, 1681
BsmAI GTCTC 4 cut(s) 458, 470, 1151, 1673
BsmBI CGTCTC 1 cut(s) 470
BsmFI GGGAC 5 cut(s) 269, 691, 1307, 1635, 1747
BsmI GAATGC 2 cut(s) 727, 1747
Bso31I GGTCTC 2 cut(s) 458, 1673
Bsp119I TTCGAA 2 cut(s) 560, 1809
Bsp143I GATC 5 cut(s) 70, 950, 1197, 1558, 1657
Bsp1720I GCTNAGC 1 cut(s) 1461
Bsp19I CCATGG 1 cut(s) 1710
BspCNI CTCAG 8 cut(s) 598, 1027, 1033, 1072, 1474, 1501, 1588, 1598
BspFNI CGCG 1 cut(s) 44
BspLI GGNNCC 6 cut(s) 613, 706, 707, 1295, 1623, 1786
BspPI GGATC 3 cut(s) 65, 1192, 1652
BspT104I TTCGAA 2 cut(s) 560, 1809
BspT107I GGYRCC 1 cut(s) 611
BspTNI GGTCTC 2 cut(s) 458, 1673
BsrBI CCGCTC 1 cut(s) 1088
BsrDI GCAATG 1 cut(s) 1266
BsrFI RCCGGY 1 cut(s) 1674
BsrI ACTGG 4 cut(s) 743, 800, 1426, 1625
BssAI RCCGGY 1 cut(s) 1674
BssECI CCNNGG 9 cut(s) 74, 105, 176, 272, 615, 692, 737, 1321, 1710
BssMI GATC 5 cut(s) 70, 950, 1197, 1558, 1657
BssNAI GTATAC 1 cut(s) 816
BssNI GRCGYC 1 cut(s) 1213
BssT1I CCWWGG 4 cut(s) 615, 692, 1321, 1710
Bst1107I GTATAC 1 cut(s) 816
Bst2UI CCWGG 3 cut(s) 273, 1328, 1388
Bst4CI ACNGT 3 cut(s) 298, 1124, 1298
Bst6I CTCTTC 4 cut(s) 456, 1102, 1265, 1342
BstACI GRCGYC 1 cut(s) 1213
BstAPI GCANNNNNTGC 2 cut(s) 1006, 1183
BstBI TTCGAA 2 cut(s) 560, 1809
BstC8I GCNNGC 3 cut(s) 30, 1011, 1090
BstDSI CCRYGG 2 cut(s) 74, 1710
BstENI CCTNNNNNAGG 1 cut(s) 1325
BstF5I GGATG 5 cut(s) 252, 639, 698, 940, 1648
BstFNI CGCG 1 cut(s) 44
BstHHI GCGC 3 cut(s) 232, 490, 526
BstKTI GATC 5 cut(s) 73, 953, 1200, 1561, 1660
BstMAI GTCTC 4 cut(s) 458, 470, 1151, 1673
BstMBI GATC 5 cut(s) 70, 950, 1197, 1558, 1657
BstMCI CGRYCG 2 cut(s) 42, 1675
BstNI CCWGG 3 cut(s) 273, 1328, 1388
BstPAI GACNNNNGTC 1 cut(s) 834
BstSCI CCNGG 5 cut(s) 271, 701, 1326, 1386, 1787
BstUI CGCG 1 cut(s) 44
BstV2I GAAGAC 2 cut(s) 1559, 1749
BstX2I RGATCY 2 cut(s) 950, 1197
BstXI CCANNNNNNTGG 1 cut(s) 1334
BstYI RGATCY 2 cut(s) 950, 1197
BstZ17I GTATAC 1 cut(s) 816
BsuI GTATCC 3 cut(s) 246, 1090, 1492
BtgI CCRYGG 2 cut(s) 74, 1710
BtsCI GGATG 5 cut(s) 252, 639, 698, 940, 1648
BtsI GCAGTG 1 cut(s) 1455
BtsIMutI CAGTG 3 cut(s) 100, 750, 1455
Cac8I GCNNGC 3 cut(s) 30, 1011, 1090
CaiI CAGNNNCTG 3 cut(s) 749, 1006, 1378
CfoI GCGC 3 cut(s) 232, 490, 526
Cfr10I RCCGGY 1 cut(s) 1674
Cfr13I GGNCC 4 cut(s) 705, 1011, 1294, 1622
CseI GACGC 2 cut(s) 149, 1221
Csp6I GTAC 2 cut(s) 151, 1429
CspAI ACCGGT 1 cut(s) 1674
CviAII CATG 2 cut(s) 1093, 1711
CviQI GTAC 2 cut(s) 151, 1429
DpnI GATC 5 cut(s) 72, 952, 1199, 1560, 1659
DpnII GATC 5 cut(s) 70, 950, 1197, 1558, 1657
DraI TTTAAA 1 cut(s) 1567
EaeI YGGCCR 3 cut(s) 540, 740, 1324
Eam1104I CTCTTC 4 cut(s) 456, 1102, 1265, 1342
EarI CTCTTC 4 cut(s) 456, 1102, 1265, 1342
EciI GGCGGA 2 cut(s) 15, 768
Eco130I CCWWGG 4 cut(s) 615, 692, 1321, 1710
Eco147I AGGCCT 1 cut(s) 858
Eco31I GGTCTC 2 cut(s) 458, 1673
Eco47I GGWCC 3 cut(s) 705, 1294, 1622
Eco57I CTGAAG 2 cut(s) 32, 1668
EcoNI CCTNNNNNAGG 1 cut(s) 1325
EcoO109I RGGNCCY 1 cut(s) 705
EcoRI GAATTC 1 cut(s) 349
EcoRII CCWGG 3 cut(s) 271, 1326, 1386
EcoT14I CCWWGG 4 cut(s) 615, 692, 1321, 1710
ErhI CCWWGG 4 cut(s) 615, 692, 1321, 1710
Esp3I CGTCTC 1 cut(s) 470
FaeI CATG 2 cut(s) 1096, 1714
FalI AAGNNNNNCTT 4 cut(s) 474, 506, 1305, 1337
FaqI GGGAC 5 cut(s) 269, 691, 1307, 1635, 1747
FatI CATG 2 cut(s) 1092, 1710
FauI CCCGC 3 cut(s) 1002, 1081, 1182
FblI GTMKAC 1 cut(s) 815
FokI GGATG 5 cut(s) 259, 646, 685, 947, 1655
FspBI CTAG 1 cut(s) 930
FspI TGCGCA 2 cut(s) 231, 525
GlaI GCGC 3 cut(s) 231, 489, 525
GsaI CCCAGC 2 cut(s) 376, 1755
HapII CCGG 5 cut(s) 290, 702, 1571, 1675, 1788
HgaI GACGC 2 cut(s) 149, 1221
HhaI GCGC 3 cut(s) 232, 490, 526
Hin1I GRCGYC 1 cut(s) 1213
Hin1II CATG 2 cut(s) 1096, 1714
Hin6I GCGC 3 cut(s) 230, 488, 524
HinP1I GCGC 3 cut(s) 230, 488, 524
HincII GTYRAC 1 cut(s) 652
HindII GTYRAC 1 cut(s) 652
HindIII AAGCTT 1 cut(s) 893
HinfI GANTC 9 cut(s) 220, 302, 557, 775, 802, 902, 1403, 1581, 1819
HpaII CCGG 5 cut(s) 290, 702, 1571, 1675, 1788
HphI GGTGA 2 cut(s) 139, 304
Hpy166II GTNNAC 4 cut(s) 652, 816, 1455, 1476
Hpy188III TCNNGA 3 cut(s) 215, 1587, 1670
Hpy8I GTNNAC 4 cut(s) 652, 816, 1455, 1476
Hpy99I CGWCG 2 cut(s) 556, 1215
HpyCH4III ACNGT 3 cut(s) 298, 1124, 1298
HpyCH4IV ACGT 1 cut(s) 835
HpyCH4V TGCA 9 cut(s) 98, 448, 727, 786, 938, 976, 1186, 1259, 1745
HpySE526I ACGT 1 cut(s) 835
Hsp92I GRCGYC 1 cut(s) 1213
Hsp92II CATG 2 cut(s) 1096, 1714
HspAI GCGC 3 cut(s) 230, 488, 524
KflI GGGWCCC 1 cut(s) 705
Kzo9I GATC 5 cut(s) 70, 950, 1197, 1558, 1657
LmnI GCTCC 6 cut(s) 16, 1003, 1046, 1207, 1340, 1589
LweI GCATC 8 cut(s) 316, 633, 707, 925, 963, 1243, 1495, 1633
MaeI CTAG 1 cut(s) 930
MaeII ACGT 1 cut(s) 835
MaeIII GTNAC 1 cut(s) 292
MalI GATC 5 cut(s) 72, 952, 1199, 1560, 1659
MbiI CCGCTC 1 cut(s) 1088
MboI GATC 5 cut(s) 70, 950, 1197, 1558, 1657
MfeI CAATTG 1 cut(s) 1535
MflI RGATCY 2 cut(s) 950, 1197
MlsI TGGCCA 2 cut(s) 542, 1326
MluCI AATT 7 cut(s) 349, 604, 944, 1278, 1535, 1631, 1719
MluNI TGGCCA 2 cut(s) 542, 1326
MlyI GAGTC 2 cut(s) 911, 1397
MmeI TCCRAC 3 cut(s) 534, 1221, 1592
Mox20I TGGCCA 2 cut(s) 542, 1326
MscI TGGCCA 2 cut(s) 542, 1326
MseI TTAA 5 cut(s) 336, 603, 876, 947, 1566
MslI CAYNNNNRTG 1 cut(s) 684
Msp20I TGGCCA 2 cut(s) 542, 1326
MspA1I CMGCKG 4 cut(s) 88, 101, 473, 1189
MspI CCGG 5 cut(s) 290, 702, 1571, 1675, 1788
MspR9I CCNGG 5 cut(s) 273, 703, 1328, 1388, 1789
MunI CAATTG 1 cut(s) 1535
Mva1269I GAATGC 2 cut(s) 727, 1747
MvaI CCWGG 3 cut(s) 273, 1328, 1388
MvnI CGCG 1 cut(s) 44
NciI CCSGG 2 cut(s) 703, 1789
NcoI CCATGG 1 cut(s) 1710
NdeII GATC 5 cut(s) 70, 950, 1197, 1558, 1657
NlaIII CATG 2 cut(s) 1096, 1714
NlaIV GGNNCC 6 cut(s) 613, 706, 707, 1295, 1623, 1786
NmeAIII GCCGAG 3 cut(s) 130, 718, 1241
NmuCI GTSAC 1 cut(s) 292
NsbI TGCGCA 2 cut(s) 231, 525
NspV TTCGAA 2 cut(s) 560, 1809
PceI AGGCCT 1 cut(s) 858
PcsI WCGNNNNNNNCGW 4 cut(s) 71, 302, 326, 557
PctI GAATGC 2 cut(s) 727, 1747
PfeI GAWTC 6 cut(s) 220, 302, 557, 775, 802, 1581
PfoI TCCNGGA 1 cut(s) 1787
PinAI ACCGGT 1 cut(s) 1674
PleI GAGTC 2 cut(s) 910, 1397
PpsI GAGTC 2 cut(s) 910, 1397
PpuMI RGGWCCY 1 cut(s) 705
PshAI GACNNNNGTC 1 cut(s) 834
PshBI ATTAAT 1 cut(s) 876
Psp5II RGGWCCY 1 cut(s) 705
Psp6I CCWGG 3 cut(s) 271, 1326, 1386
PspFI CCCAGC 2 cut(s) 372, 1751
PspGI CCWGG 3 cut(s) 271, 1326, 1386
PspN4I GGNNCC 6 cut(s) 613, 706, 707, 1295, 1623, 1786
PspPI GGNCC 4 cut(s) 705, 1011, 1294, 1622
PspPPI RGGWCCY 1 cut(s) 705
PstNI CAGNNNCTG 3 cut(s) 749, 1006, 1378
PsuI RGATCY 2 cut(s) 950, 1197
PvuII CAGCTG 1 cut(s) 101
RsaI GTAC 2 cut(s) 152, 1430
RsaNI GTAC 2 cut(s) 151, 1429
RseI CAYNNNNRTG 1 cut(s) 684
SaqAI TTAA 5 cut(s) 336, 603, 876, 947, 1566
Sau3AI GATC 5 cut(s) 70, 950, 1197, 1558, 1657
Sau96I GGNCC 4 cut(s) 705, 1011, 1294, 1622
SchI GAGTC 2 cut(s) 911, 1397
ScrFI CCNGG 5 cut(s) 273, 703, 1328, 1388, 1789
SfaNI GCATC 8 cut(s) 316, 633, 707, 925, 963, 1243, 1495, 1633
SfuI TTCGAA 2 cut(s) 560, 1809
SinI GGWCC 3 cut(s) 705, 1294, 1622
SmiMI CAYNNNNRTG 1 cut(s) 684
SmlI CTYRAG 2 cut(s) 491, 659
SmoI CTYRAG 2 cut(s) 491, 659
Sse9I AATT 7 cut(s) 349, 604, 944, 1278, 1535, 1631, 1719
SseBI AGGCCT 1 cut(s) 858
SspI AATATT 1 cut(s) 316
SspMI CTAG 1 cut(s) 930
StuI AGGCCT 1 cut(s) 858
StyD4I CCNGG 5 cut(s) 271, 701, 1326, 1386, 1787
StyI CCWWGG 4 cut(s) 615, 692, 1321, 1710
TaaI ACNGT 3 cut(s) 298, 1124, 1298
TaiI ACGT 1 cut(s) 838
TaqI TCGA 8 cut(s) 38, 65, 305, 353, 560, 1127, 1671, 1809
TasI AATT 7 cut(s) 349, 604, 944, 1278, 1535, 1631, 1719
TatI WGTACW 1 cut(s) 1428
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 6 cut(s) 220, 302, 557, 775, 802, 1581
Tru1I TTAA 5 cut(s) 336, 603, 876, 947, 1566
Tru9I TTAA 5 cut(s) 336, 603, 876, 947, 1566
TscAI CASTG 3 cut(s) 100, 750, 1462
TseFI GTSAC 1 cut(s) 292
Tsp45I GTSAC 1 cut(s) 292
TspDTI ATGAA 3 cut(s) 212, 1565, 1754
TspGWI ACGGA 3 cut(s) 63, 138, 1190
TspRI CASTG 3 cut(s) 100, 750, 1462
VpaK11BI GGWCC 3 cut(s) 705, 1294, 1622
VspI ATTAAT 1 cut(s) 876
XagI CCTNNNNNAGG 1 cut(s) 1325
XapI RAATTY 2 cut(s) 349, 1631
XcmI CCANNNNNNNNNTGG 1 cut(s) 1334
XmiI GTMKAC 1 cut(s) 815
XspI CTAG 1 cut(s) 930
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.