RchiOBHm_Chr2g0091611

SNW SKI-interacting

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0010126
Physical Location & Seq
Forward (+)
5273196 .. 5275298
2103 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46678

Sequence Viewer

Length: 1773 bp
ATGGCGGCTCTGAAGGAGCTACTTCCGCCAGCGAAATCAACCGCCGCCACTTATTATGACCACTCGAACGATCCGTGGTTCAAGCAGCGGTTCAGTGCAGCTGCCGAGGCCGAAAAGGCTGCTGTGGTGAAGCCCAAGCCTGTGCCTCCGTATCAGAAGCGTCAGGGTTTTGTTCCGAGGAAGGTAGAGGACTTTGGGGATGGCGGTGCGTTCCCAGAGATTCATATTGCTCAGTACCCGCTTGGCATGGGCAGGGACAAGTCGGCCAAGCCCGGGAGTAAGGTTCTTCCGGTGACTGTTGATTCGAGGGGGAACATTTCGTATGATGCTATTGTTAAGCAGAATGAGAATTCAAGGAAGATTGTGTATTCCCAGCATAAGGATATTGTGCCGAAGATTTTGAAGAATGAGGAAGATGCGATGAGTGAGGAGGAGGATGAGGAGTTGCAGAAGGAGATTGAAGAGACGACAGCAGAGACAAAAGCTGCGCTTGAGAAGATTGTGAATGTGAGATTGAGCGCTGCGCAGCCGAAGAATGTAGCCACACAGTCGTCTGATTCAAAGTTTATCAAGTATAAGCCATCTCAGAAGTCATTGGCTTTTAATTCTGGTGCCAAGGAGAGGATTATTAGGATGGTGGAGATGCCTGTTGACCCACTTGAGCCTCCCAAGTTCAAGCATAAGCGTGTTCCAAGGGCTTCCGGGTCCCCACCTGTGCCAGTCCTGCATTCCCCTCCTCGGCCGGTGTCTGTGAAAGATCAGCAGGATTGGAAAATTCCGCCTTGCATTTCAAACTGGAAGAACCCAAAAGGGTATACAATCCCATTGGACAAACGTCTAGCTGCTGATGGGAGAGGCCTCCAAGATGTTCAGATTAATGATAATTTTGCAAAGCTTTCTGAGTCTTTGTATGTAGCAGAGCAGAAGGCTAGGGACGCAGTTGAATTGAGATCTAAAGTTCAGAGGGAGATGATGCAGAAGGAGAAGGATAGGAAAGAGCAGGAGCTGCGGGCTTTAGCTCAAAAAGCTCGTTCTGAGAGAACAGGAGCTGCACCCCCAGCTTCCTTTGCAATGCCTTCTGAGAGAGCGGGCATGGATACTGATAGAAGAGGGGATTATGAGCGTCCAAGGGAAAAGGAGATGGATTACCCGAAGGAGACAAGAGAGGAGAAAGAACAGAGGCTGCAGCGGGAGAAGATCCGTGAGGAGCGACGCCGAGAGAGGGAAAGGGAGAGAAGGTTGGAAGCCAAAGATGCTGCAATGGGAAAGAAGAGTAAAATTACAAGAGATAGGGATCGTGATATAAGTGAGAAGGTCGCCCTTGGCATGGCTTCTGCAGGAGCAGGAAGAGGGGAGAGGTTATGTATGACCAGAGGCTGTTCAACCAGGAGAAGGGAATGGACTCTGGGTTTGCTACTGATGACCAGTACAATGCCGAAGAAGGATACTGATGCTGAGGTGTATGGAGGGGCTGATGAGCAATTGGATAAGATTATGAAGACTGATCGCTTTAAACCTGACAAAGGATTCTCAGGAGCATCTGAGAAGGCTGGTGGTCGGAGAGATGGACCAGTTGAATTTGAGAAGGATGCTGAAGAAGCTGATCCATTTGGTCTCGATCAGTTTTTGACAGAGGTAAAGAAGGGTAAGAAGGCCATGGAAAAAGTTGGCAGAGGGGGGACAATGAAAGCAACTGCTGGGTCTTCAATGCGAGATAGCTCTGACGTGGGTTCCGGAAGAAGTCGTATTGGGTTTGAAAGGGGGGGTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000122 GO:0000350 GO:0000375 GO:0000377 GO:0000393 GO:0000398 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003712 GO:0003713 GO:0003714 GO:0003723 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006970 GO:0006974 GO:0007154 GO:0007165 GO:0007275 GO:0007399 GO:0008134 GO:0008150 GO:0008152 GO:0008219 GO:0008380 GO:0008630 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010555 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0010646 GO:0010647 GO:0010720 GO:0012501 GO:0016043 GO:0016070 GO:0016071 GO:0016363 GO:0017015 GO:0019219 GO:0019222 GO:0022008 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0030511 GO:0030522 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032101 GO:0032104 GO:0032107 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033120 GO:0033554 GO:0033993 GO:0034399 GO:0034622 GO:0034641 GO:0035257 GO:0035556 GO:0036002 GO:0042221 GO:0042752 GO:0042771 GO:0042809 GO:0042974 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045595 GO:0045597 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046332 GO:0046483 GO:0048024 GO:0048026 GO:0048384 GO:0048385 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048584 GO:0048608 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050684 GO:0050685 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0051254 GO:0051427 GO:0051569 GO:0051571 GO:0051716 GO:0051960 GO:0051962 GO:0060255 GO:0060284 GO:0061458 GO:0065003 GO:0065007 GO:0070013 GO:0070562 GO:0071007 GO:0071013 GO:0071014 GO:0071141 GO:0071704 GO:0071826 GO:0071840 GO:0072331 GO:0072332 GO:0080090 GO:0090092 GO:0090100 GO:0090287 GO:0090304 GO:0097159 GO:0097190 GO:0097193 GO:0097305 GO:0140110 GO:1901360 GO:1901363 GO:1901700 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903507 GO:1903508 GO:1903844 GO:1903846 GO:1905269 GO:1990904 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03040 ko04330 ko05169 ko05203 map03040 map04330 map05169 map05203
Pfam Domains
Protein Families
SKIP_SNW

Protein Analysis

590

Amino Acids

66.3

Weight (kDa)

9.49

Isoelectric Point (pI)

47.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SKIP_SNW PF02731 188 - 347 7.2e-72 SKIP/SNW domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G77180 AT1G77180 AT1G77180
fragaria_vesca FvH4_1g05870 FvH4_1g05870
malus_domestica MD02G1060800.v1.1 MD15G1194300.v1.1
prunus_persica Prupe.6G190500_v2.0.a1
pyrus_communis pycom02g04990 pycom15g17390
rosa_chinensis RchiOBHm_Chr2g0091531 RchiOBHm_Chr2g0091611
rosa_laevigata RLG00000016233
rosa_multiflora Rmu_sc0002407.1_g000004
rosa_roxburghii Rroxscaffold_2G00149960
rosa_rugosa Rorug02G0018500
rosa_samantha Rh2AG063700 Rh2BG063100 Rh2CG064800 Rh2DG063200
rosa_wichuraiana Rw2G005670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 525
AccB1I GGYRCC 1 cut(s) 611
AccBSI CCGCTC 1 cut(s) 1088
AccI GTMKAC 1 cut(s) 815
AccIII TCCGGA 1 cut(s) 1733
AclWI GGATC 4 cut(s) 65, 1192, 1302, 1598
AcoI YGGCCR 2 cut(s) 264, 740
AcsI RAATTY 3 cut(s) 349, 774, 1577
AcuI CTGAAG 2 cut(s) 32, 1614
AcyI GRCGYC 1 cut(s) 1213
AfaI GTAC 2 cut(s) 236, 1429
AfeI AGCGCT 1 cut(s) 520
AfiI CCNNNNNNNGG 8 cut(s) 273, 379, 621, 738, 1222, 1327, 1392, 1523
AjiI CACGTC 1 cut(s) 1726
AjnI CCWGG 1 cut(s) 1385
Alw26I GTCTC 4 cut(s) 458, 470, 1151, 1619
AlwI GGATC 4 cut(s) 65, 1192, 1302, 1598
AlwNI CAGNNNCTG 4 cut(s) 1006, 1049, 1183, 1377
Ama87I CYCGRG 1 cut(s) 272
Aor13HI TCCGGA 1 cut(s) 1733
Aor51HI AGCGCT 1 cut(s) 520
AoxI GGCC 5 cut(s) 108, 264, 740, 856, 1653
ApoI RAATTY 3 cut(s) 349, 774, 1577
ArsI GACNNNNNNTTYG 4 cut(s) 286, 318, 1393, 1425
AseI ATTAAT 1 cut(s) 876
AspLEI GCGC 3 cut(s) 490, 521, 526
AspS9I GGNCC 2 cut(s) 705, 1568
AsuC2I CCSGG 3 cut(s) 273, 274, 703
AsuHPI GGTGA 2 cut(s) 139, 304
AvaI CYCGRG 1 cut(s) 272
AvaII GGWCC 2 cut(s) 705, 1568
BanI GGYRCC 1 cut(s) 611
BbsI GAAGAC 2 cut(s) 1505, 1695
BbvCI CCTCAGC 1 cut(s) 1455
BccI CCATC 6 cut(s) 194, 589, 628, 842, 1135, 1559
BcgI CGANNNNNNTGC 2 cut(s) 101, 135
BciT130I CCWGG 1 cut(s) 1387
BciVI GTATCC 2 cut(s) 1090, 1438
BcnI CCSGG 3 cut(s) 273, 274, 703
BcoDI GTCTC 4 cut(s) 458, 470, 1151, 1619
BfaI CTAG 2 cut(s) 839, 930
BfmI CTRYAG 2 cut(s) 1184, 1335
BfoI RGCGCY 1 cut(s) 522
BfuI GTATCC 2 cut(s) 1090, 1438
BglI GCCNNNNNGGC 1 cut(s) 116
BglII AGATCT 1 cut(s) 950
Bme1390I CCNGG 4 cut(s) 273, 274, 703, 1387
Bme18I GGWCC 2 cut(s) 705, 1568
BmeT110I CYCGRG 1 cut(s) 272
BmgBI CACGTC 1 cut(s) 1726
BmgT120I GGNCC 2 cut(s) 705, 1568
BmiI GGNNCC 4 cut(s) 613, 706, 707, 1732
BmrFI CCNGG 4 cut(s) 273, 274, 703, 1387
BmsI GCATC 8 cut(s) 316, 406, 633, 963, 1243, 1441, 1547, 1579
BoxI GACNNNNGTC 1 cut(s) 834
BpiI GAAGAC 2 cut(s) 1505, 1695
Bpu10I CCTNAGC 1 cut(s) 1455
BpuEI CTTGAG 2 cut(s) 512, 680
BpuMI CCSGG 3 cut(s) 273, 274, 703
BsaBI GATNNNNATC 1 cut(s) 1293
BsaHI GRCGYC 1 cut(s) 1213
BsaI GGTCTC 1 cut(s) 1619
BsaWI WCCGGW 2 cut(s) 289, 1733
BsaXI ACNNNNNCTCC 2 cut(s) 1223, 1253
Bsc4I CCNNNNNNNGG 8 cut(s) 273, 379, 621, 738, 1222, 1327, 1392, 1523
Bse118I RCCGGY 1 cut(s) 742
Bse1I ACTGG 4 cut(s) 719, 800, 1425, 1571
Bse3DI GCAATG 2 cut(s) 1077, 1266
Bse8I GATNNNNATC 1 cut(s) 1293
BseAI TCCGGA 1 cut(s) 1733
BseBI CCWGG 1 cut(s) 1387
BseGI GGATG 4 cut(s) 205, 442, 639, 1594
BseJI GATNNNNATC 1 cut(s) 1293
BseLI CCNNNNNNNGG 8 cut(s) 273, 379, 621, 738, 1222, 1327, 1392, 1523
BseMI GCAATG 2 cut(s) 1077, 1266
BseMII CTCAG 8 cut(s) 245, 599, 891, 1026, 1071, 1446, 1533, 1545
BseNI ACTGG 4 cut(s) 719, 800, 1425, 1571
BseRI GAGGAG 6 cut(s) 443, 446, 455, 726, 1181, 1220
BseX3I CGGCCG 1 cut(s) 740
BseYI CCCAGC 3 cut(s) 372, 1057, 1697
BsgI GTGCAG 2 cut(s) 117, 1035
Bsh1285I CGRYCG 1 cut(s) 743
BshFI GGCC 5 cut(s) 110, 266, 742, 858, 1655
BshNI GGYRCC 1 cut(s) 611
BsiEI CGRYCG 1 cut(s) 743
BsiHKCI CYCGRG 1 cut(s) 272
BsiSI CCGG 5 cut(s) 273, 290, 702, 743, 1734
BslFI GGGAC 4 cut(s) 269, 691, 947, 1693
BslI CCNNNNNNNGG 8 cut(s) 273, 379, 621, 738, 1222, 1327, 1392, 1523
BsmAI GTCTC 4 cut(s) 458, 470, 1151, 1619
BsmBI CGTCTC 1 cut(s) 458
BsmFI GGGAC 4 cut(s) 269, 691, 947, 1693
BsmI GAATGC 1 cut(s) 727
BsnI GGCC 5 cut(s) 110, 266, 742, 858, 1655
Bso31I GGTCTC 1 cut(s) 1619
BsoBI CYCGRG 1 cut(s) 272
Bsp13I TCCGGA 1 cut(s) 1733
Bsp143I GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1504, 1603, 1618
Bsp19I CCATGG 1 cut(s) 1656
BspANI GGCC 5 cut(s) 110, 266, 742, 858, 1655
BspCNI CTCAG 8 cut(s) 244, 598, 892, 1027, 1072, 1447, 1534, 1544
BspEI TCCGGA 1 cut(s) 1733
BspLI GGNNCC 4 cut(s) 613, 706, 707, 1732
BspMAI CTGCAG 2 cut(s) 1188, 1339
BspPI GGATC 4 cut(s) 65, 1192, 1302, 1598
BspT107I GGYRCC 1 cut(s) 611
BspTNI GGTCTC 1 cut(s) 1619
BsrBI CCGCTC 1 cut(s) 1088
BsrDI GCAATG 2 cut(s) 1077, 1266
BsrFI RCCGGY 1 cut(s) 742
BsrI ACTGG 4 cut(s) 719, 800, 1425, 1571
BssAI RCCGGY 1 cut(s) 742
BssMI GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1504, 1603, 1618
BssNAI GTATAC 1 cut(s) 816
BssNI GRCGYC 1 cut(s) 1213
BssT1I CCWWGG 5 cut(s) 615, 692, 1127, 1321, 1656
Bst1107I GTATAC 1 cut(s) 816
Bst2UI CCWGG 1 cut(s) 1387
Bst4CI ACNGT 2 cut(s) 298, 549
Bst6I CTCTTC 4 cut(s) 456, 1102, 1265, 1342
BstACI GRCGYC 1 cut(s) 1213
BstAPI GCANNNNNTGC 1 cut(s) 1006
BstC8I GCNNGC 3 cut(s) 30, 1011, 1090
BstDEI CTNAG 8 cut(s) 231, 585, 900, 1035, 1080, 1455, 1531, 1542
BstDSI CCRYGG 2 cut(s) 74, 1656
BstENI CCTNNNNNAGG 1 cut(s) 1521
BstF5I GGATG 4 cut(s) 205, 442, 639, 1594
BstH2I RGCGCY 1 cut(s) 522
BstHHI GCGC 3 cut(s) 490, 521, 526
BstKTI GATC 8 cut(s) 73, 760, 953, 1200, 1297, 1507, 1606, 1621
BstMAI GTCTC 4 cut(s) 458, 470, 1151, 1619
BstMBI GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1504, 1603, 1618
BstMCI CGRYCG 1 cut(s) 743
BstNI CCWGG 1 cut(s) 1387
BstPAI GACNNNNGTC 1 cut(s) 834
BstSCI CCNGG 4 cut(s) 271, 272, 701, 1385
BstSFI CTRYAG 2 cut(s) 1184, 1335
BstV2I GAAGAC 2 cut(s) 1505, 1695
BstX2I RGATCY 2 cut(s) 950, 1197
BstYI RGATCY 2 cut(s) 950, 1197
BstZ17I GTATAC 1 cut(s) 816
BstZI CGGCCG 1 cut(s) 740
BsuI GTATCC 2 cut(s) 1090, 1438
BsuRI GGCC 5 cut(s) 110, 266, 742, 858, 1655
BtgI CCRYGG 2 cut(s) 74, 1656
BtgZI GCGATG 1 cut(s) 434
BtrI CACGTC 1 cut(s) 1726
BtsCI GGATG 4 cut(s) 205, 442, 639, 1594
BtsIMutI CAGTG 1 cut(s) 100
Cac8I GCNNGC 3 cut(s) 30, 1011, 1090
CaiI CAGNNNCTG 4 cut(s) 1006, 1049, 1183, 1377
CfoI GCGC 3 cut(s) 490, 521, 526
Cfr10I RCCGGY 1 cut(s) 742
Cfr13I GGNCC 2 cut(s) 705, 1568
Cfr9I CCCGGG 1 cut(s) 272
CseI GACGC 4 cut(s) 149, 944, 1112, 1221
Csp6I GTAC 2 cut(s) 235, 1428
CviAII CATG 4 cut(s) 247, 1093, 1327, 1657
CviQI GTAC 2 cut(s) 235, 1428
DdeI CTNAG 8 cut(s) 231, 585, 900, 1035, 1080, 1455, 1531, 1542
DpnI GATC 8 cut(s) 72, 759, 952, 1199, 1296, 1506, 1605, 1620
DpnII GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1504, 1603, 1618
DraI TTTAAA 1 cut(s) 1513
EaeI YGGCCR 2 cut(s) 264, 740
EagI CGGCCG 1 cut(s) 740
Eam1104I CTCTTC 4 cut(s) 456, 1102, 1265, 1342
EarI CTCTTC 4 cut(s) 456, 1102, 1265, 1342
EciI GGCGGA 2 cut(s) 15, 768
EclXI CGGCCG 1 cut(s) 740
Eco130I CCWWGG 5 cut(s) 615, 692, 1127, 1321, 1656
Eco147I AGGCCT 1 cut(s) 858
Eco31I GGTCTC 1 cut(s) 1619
Eco47I GGWCC 2 cut(s) 705, 1568
Eco47III AGCGCT 1 cut(s) 520
Eco52I CGGCCG 1 cut(s) 740
Eco57I CTGAAG 2 cut(s) 32, 1614
Eco88I CYCGRG 1 cut(s) 272
EcoNI CCTNNNNNAGG 1 cut(s) 1521
EcoO109I RGGNCCY 1 cut(s) 705
EcoRI GAATTC 1 cut(s) 349
EcoRII CCWGG 1 cut(s) 1385
EcoT14I CCWWGG 5 cut(s) 615, 692, 1127, 1321, 1656
ErhI CCWWGG 5 cut(s) 615, 692, 1127, 1321, 1656
Esp3I CGTCTC 1 cut(s) 458
FaeI CATG 4 cut(s) 250, 1096, 1330, 1660
FalI AAGNNNNNCTT 2 cut(s) 474, 506
FaqI GGGAC 4 cut(s) 269, 691, 947, 1693
FatI CATG 4 cut(s) 246, 1092, 1326, 1656
FauI CCCGC 4 cut(s) 246, 1002, 1081, 1182
FblI GTMKAC 1 cut(s) 815
FokI GGATG 4 cut(s) 212, 449, 646, 1601
FspBI CTAG 2 cut(s) 839, 930
FspI TGCGCA 1 cut(s) 525
GlaI GCGC 3 cut(s) 489, 520, 525
GsaI CCCAGC 3 cut(s) 376, 1061, 1701
HaeII RGCGCY 1 cut(s) 522
HaeIII GGCC 5 cut(s) 110, 266, 742, 858, 1655
HapII CCGG 5 cut(s) 273, 290, 702, 743, 1734
HgaI GACGC 4 cut(s) 149, 944, 1112, 1221
HhaI GCGC 3 cut(s) 490, 521, 526
Hin1I GRCGYC 1 cut(s) 1213
Hin1II CATG 4 cut(s) 250, 1096, 1330, 1660
Hin6I GCGC 3 cut(s) 488, 519, 524
HinP1I GCGC 3 cut(s) 488, 519, 524
HincII GTYRAC 1 cut(s) 652
HindII GTYRAC 1 cut(s) 652
HindIII AAGCTT 1 cut(s) 893
HinfI GANTC 6 cut(s) 220, 302, 557, 902, 1402, 1527
HpaII CCGG 5 cut(s) 273, 290, 702, 743, 1734
HphI GGTGA 2 cut(s) 139, 304
Hpy166II GTNNAC 2 cut(s) 652, 816
Hpy188III TCNNGA 4 cut(s) 1298, 1533, 1616, 1734
Hpy8I GTNNAC 2 cut(s) 652, 816
Hpy99I CGWCG 1 cut(s) 1215
HpyCH4III ACNGT 2 cut(s) 298, 549
HpyCH4IV ACGT 2 cut(s) 835, 1725
HpyF3I CTNAG 8 cut(s) 231, 585, 900, 1035, 1080, 1455, 1531, 1542
HpySE526I ACGT 2 cut(s) 835, 1725
Hsp92I GRCGYC 1 cut(s) 1213
Hsp92II CATG 4 cut(s) 250, 1096, 1330, 1660
HspAI GCGC 3 cut(s) 488, 519, 524
KflI GGGWCCC 1 cut(s) 705
Kpn2I TCCGGA 1 cut(s) 1733
Kzo9I GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1504, 1603, 1618
LmnI GCTCC 6 cut(s) 16, 1003, 1046, 1207, 1340, 1535
LweI GCATC 8 cut(s) 316, 406, 633, 963, 1243, 1441, 1547, 1579
MaeI CTAG 2 cut(s) 839, 930
MaeII ACGT 2 cut(s) 835, 1725
MaeIII GTNAC 1 cut(s) 292
MalI GATC 8 cut(s) 72, 759, 952, 1199, 1296, 1506, 1605, 1620
MbiI CCGCTC 1 cut(s) 1088
MboI GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1504, 1603, 1618
MfeI CAATTG 1 cut(s) 1481
MflI RGATCY 2 cut(s) 950, 1197
MluCI AATT 8 cut(s) 349, 604, 774, 883, 944, 1278, 1481, 1577
MlyI GAGTC 2 cut(s) 911, 1396
MmeI TCCRAC 2 cut(s) 1221, 1538
MroI TCCGGA 1 cut(s) 1733
MseI TTAA 4 cut(s) 336, 603, 876, 1512
MslI CAYNNNNRTG 1 cut(s) 684
MspA1I CMGCKG 3 cut(s) 88, 101, 1189
MspI CCGG 5 cut(s) 273, 290, 702, 743, 1734
MspR9I CCNGG 4 cut(s) 273, 274, 703, 1387
MteI GCGCNGCGC 1 cut(s) 522
MunI CAATTG 1 cut(s) 1481
Mva1269I GAATGC 1 cut(s) 727
MvaI CCWGG 1 cut(s) 1387
NciI CCSGG 3 cut(s) 273, 274, 703
NcoI CCATGG 1 cut(s) 1656
NdeII GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1504, 1603, 1618
NlaIII CATG 4 cut(s) 250, 1096, 1330, 1660
NlaIV GGNNCC 4 cut(s) 613, 706, 707, 1732
NmeAIII GCCGAG 3 cut(s) 130, 718, 1241
NmuCI GTSAC 1 cut(s) 292
NsbI TGCGCA 1 cut(s) 525
PceI AGGCCT 1 cut(s) 858
PcsI WCGNNNNNNNCGW 1 cut(s) 71
PctI GAATGC 1 cut(s) 727
PfeI GAWTC 4 cut(s) 220, 302, 557, 1527
PleI GAGTC 2 cut(s) 910, 1396
PpsI GAGTC 2 cut(s) 910, 1396
PpuMI RGGWCCY 1 cut(s) 705
PshAI GACNNNNGTC 1 cut(s) 834
PshBI ATTAAT 1 cut(s) 876
Psp5II RGGWCCY 1 cut(s) 705
Psp6I CCWGG 1 cut(s) 1385
PspFI CCCAGC 3 cut(s) 372, 1057, 1697
PspGI CCWGG 1 cut(s) 1385
PspN4I GGNNCC 4 cut(s) 613, 706, 707, 1732
PspPI GGNCC 2 cut(s) 705, 1568
PspPPI RGGWCCY 1 cut(s) 705
PstI CTGCAG 2 cut(s) 1188, 1339
PstNI CAGNNNCTG 4 cut(s) 1006, 1049, 1183, 1377
PsuI RGATCY 2 cut(s) 950, 1197
PvuII CAGCTG 1 cut(s) 101
RsaI GTAC 2 cut(s) 236, 1429
RsaNI GTAC 2 cut(s) 235, 1428
RseI CAYNNNNRTG 1 cut(s) 684
SaqAI TTAA 4 cut(s) 336, 603, 876, 1512
Sau3AI GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1504, 1603, 1618
Sau96I GGNCC 2 cut(s) 705, 1568
SchI GAGTC 2 cut(s) 911, 1396
ScrFI CCNGG 4 cut(s) 273, 274, 703, 1387
SfaNI GCATC 8 cut(s) 316, 406, 633, 963, 1243, 1441, 1547, 1579
SfcI CTRYAG 2 cut(s) 1184, 1335
SinI GGWCC 2 cut(s) 705, 1568
SmaI CCCGGG 1 cut(s) 274
SmiMI CAYNNNNRTG 1 cut(s) 684
SmlI CTYRAG 2 cut(s) 491, 659
SmoI CTYRAG 2 cut(s) 491, 659
Sse9I AATT 8 cut(s) 349, 604, 774, 883, 944, 1278, 1481, 1577
SseBI AGGCCT 1 cut(s) 858
SspMI CTAG 2 cut(s) 839, 930
StuI AGGCCT 1 cut(s) 858
StyD4I CCNGG 4 cut(s) 271, 272, 701, 1385
StyI CCWWGG 5 cut(s) 615, 692, 1127, 1321, 1656
TaaI ACNGT 2 cut(s) 298, 549
TaiI ACGT 2 cut(s) 838, 1728
TaqI TCGA 3 cut(s) 65, 305, 1617
TasI AATT 8 cut(s) 349, 604, 774, 883, 944, 1278, 1481, 1577
TatI WGTACW 1 cut(s) 1427
TauI GCSGC 2 cut(s) 8, 47
TfiI GAWTC 4 cut(s) 220, 302, 557, 1527
Tru1I TTAA 4 cut(s) 336, 603, 876, 1512
Tru9I TTAA 4 cut(s) 336, 603, 876, 1512
TscAI CASTG 1 cut(s) 100
TseFI GTSAC 1 cut(s) 292
Tsp45I GTSAC 1 cut(s) 292
TspDTI ATGAA 3 cut(s) 212, 1511, 1700
TspGWI ACGGA 3 cut(s) 63, 138, 1190
TspMI CCCGGG 1 cut(s) 272
TspRI CASTG 1 cut(s) 100
VpaK11BI GGWCC 2 cut(s) 705, 1568
VspI ATTAAT 1 cut(s) 876
XagI CCTNNNNNAGG 1 cut(s) 1521
XapI RAATTY 3 cut(s) 349, 774, 1577
XmaI CCCGGG 1 cut(s) 272
XmiI GTMKAC 1 cut(s) 815
XspI CTAG 2 cut(s) 839, 930
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.