Rmu_sc0002407.1_g000004

SNW SKI-interacting

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002407.1
OG0010126
Physical Location & Seq
Reverse (-)
15663 .. 17489
1827 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002407.1_g000004.1.cds

Sequence Viewer

Length: 1827 bp
atggcggctctgaaggagctacttccgccagcgaaatcaaccgccgccacttattatgaccactcgaacgatccgtggttcaagcagcggttcagtgcagctgccgaggccgaaaaggcagctgtagtgcagcccaagcctgtgcctccgtatcagaagcgtcagggttttgttccgaggaaggtagaggactttggggatggcggtgcgttcccagagattcatattgctcagtacccgcttggcatgggcagggacaagtcggccaagcccgggagtaaggttcttccggtgactgttgattcgagggggaacatttcttatgatgctattgttaagcagaatgagaattcgaggaagattgtgtattcccagcataaggatattgtgccgaagattttgaagaatgaggaagatgcgatgagtgaggaggaggatgaggagttgcagaaggagattgaggagacgacagcagagacaaaagctgcgcttgagaagattgtgaatgtgagattgagcgctgcgcagccgaagaatgtagccacacagtcgtccgattcaaagtttatcaagtataagccatctcagaagtcgttggcttttaattctggtgccaaggagaggattattaggatggtggagatgcctgttgacccacttgagcctcccaagttcaagcataagcgtgttccaagggcttccgggtccccacctgtgccagtcctgcattcccctcctcggccggtgtctgtgaaagatcagcaggattggaagattccgccttgcatttcaaactggaagaacccaaaagggtatacaatcccattggacaaacgtctggctgctgatgggagaggcctccaagatgttcagattaatgataattttgcaaagctttctgagtctttgtatgtagcagagcagaaggctagggacgcagttgaattgagatctaaagttcagagggagatgatgcagaaggagaaggataggaaagagcaggagctgcgggctttagctcaaaaagctcgttctgagagaacaggagctgcacccccagcttcctttgcaatgccttctgagagagcgggcatggatactgatagaagaggggattatgagcgtccaagggaaaaggagatggattacccgaaggagacaagagaggagaaagaacagaggttgcagcgggagaagatccgtgaggagcgacgccgagagagggaaagggagagaaggttggaagccaaagatgctgcaatgggaaagaagagtaaaattacaagagatagggatcgtgatataagtgagaaagtcgcccttggcatggcttctgcaggagcaggaagagggggagaggttatgtatgaccagaggctgttcaaccaggagaagggaatggactctgggtttgctactgatgaccagtacaatgtttatgacaagggcttgttcactgctcagcctaccttgtccactttatacaggccgaagaaggatactgatgctgaggtgtatggaggggctgatgagcaattggataagattatgaagactgatcgctttaaacctgacaaaggattctcaggagcatctgagaaggctggtggtcggagagatggaccagttgaatttgagaaggatgctgaagaagctgatccatttggtctcgatcagtttttgacagaggtaaagaagggtaagaaggccatggaaaaagttggcagaggggggacaatgaaagcaactgctgggtcttcaatgcgagatagctctgatgtgggttccggaagaagtcgtattgggtttgaaagggggggtcgctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000122 GO:0000350 GO:0000375 GO:0000377 GO:0000393 GO:0000398 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003712 GO:0003713 GO:0003714 GO:0003723 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006970 GO:0006974 GO:0007154 GO:0007165 GO:0007275 GO:0007399 GO:0008134 GO:0008150 GO:0008152 GO:0008219 GO:0008380 GO:0008630 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010555 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0010646 GO:0010647 GO:0010720 GO:0012501 GO:0016043 GO:0016070 GO:0016071 GO:0016363 GO:0017015 GO:0019219 GO:0019222 GO:0022008 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0030511 GO:0030522 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032101 GO:0032104 GO:0032107 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033120 GO:0033554 GO:0033993 GO:0034399 GO:0034622 GO:0034641 GO:0035257 GO:0035556 GO:0036002 GO:0042221 GO:0042752 GO:0042771 GO:0042809 GO:0042974 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045595 GO:0045597 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046332 GO:0046483 GO:0048024 GO:0048026 GO:0048384 GO:0048385 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048584 GO:0048608 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050684 GO:0050685 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0051254 GO:0051427 GO:0051569 GO:0051571 GO:0051716 GO:0051960 GO:0051962 GO:0060255 GO:0060284 GO:0061458 GO:0065003 GO:0065007 GO:0070013 GO:0070562 GO:0071007 GO:0071013 GO:0071014 GO:0071141 GO:0071704 GO:0071826 GO:0071840 GO:0072331 GO:0072332 GO:0080090 GO:0090092 GO:0090100 GO:0090287 GO:0090304 GO:0097159 GO:0097190 GO:0097193 GO:0097305 GO:0140110 GO:1901360 GO:1901363 GO:1901700 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903507 GO:1903508 GO:1903844 GO:1903846 GO:1905269 GO:1990904 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03040 ko04330 ko05169 ko05203 map03040 map04330 map05169 map05203
Pfam Domains
Protein Families
SKIP_SNW

Protein Analysis

608

Amino Acids

68.31

Weight (kDa)

9.26

Isoelectric Point (pI)

46.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G77180 AT1G77180 AT1G77180
fragaria_vesca FvH4_1g05870 FvH4_1g05870
malus_domestica MD02G1060800.v1.1 MD15G1194300.v1.1
prunus_persica Prupe.6G190500_v2.0.a1
pyrus_communis pycom02g04990 pycom15g17390
rosa_chinensis RchiOBHm_Chr2g0091531 RchiOBHm_Chr2g0091611
rosa_laevigata RLG00000016233
rosa_multiflora Rmu_sc0002407.1_g000004
rosa_roxburghii Rroxscaffold_2G00149960
rosa_rugosa Rorug02G0018500
rosa_samantha Rh2AG063700 Rh2BG063100 Rh2CG064800 Rh2DG063200
rosa_wichuraiana Rw2G005670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 525
AccB1I GGYRCC 1 cut(s) 611
AccBSI CCGCTC 1 cut(s) 1088
AccI GTMKAC 1 cut(s) 815
AccIII TCCGGA 1 cut(s) 1787
AclWI GGATC 4 cut(s) 65, 1192, 1302, 1652
AcoI YGGCCR 2 cut(s) 264, 740
AcsI RAATTY 2 cut(s) 349, 1631
AcuI CTGAAG 2 cut(s) 32, 1668
AcyI GRCGYC 1 cut(s) 1213
AfaI GTAC 2 cut(s) 236, 1430
AfeI AGCGCT 1 cut(s) 520
AfiI CCNNNNNNNGG 8 cut(s) 273, 379, 621, 738, 1222, 1327, 1393, 1577
AjnI CCWGG 1 cut(s) 1386
Alw26I GTCTC 4 cut(s) 458, 470, 1151, 1673
AlwI GGATC 4 cut(s) 65, 1192, 1302, 1652
AlwNI CAGNNNCTG 3 cut(s) 1006, 1049, 1378
Ama87I CYCGRG 1 cut(s) 272
Aor13HI TCCGGA 1 cut(s) 1787
Aor51HI AGCGCT 1 cut(s) 520
AoxI GGCC 6 cut(s) 108, 264, 740, 856, 1487, 1707
ApoI RAATTY 2 cut(s) 349, 1631
ArsI GACNNNNNNTTYG 4 cut(s) 286, 318, 1394, 1426
AseI ATTAAT 1 cut(s) 876
AspLEI GCGC 3 cut(s) 490, 521, 526
AspS9I GGNCC 2 cut(s) 705, 1622
AsuC2I CCSGG 3 cut(s) 273, 274, 703
AsuHPI GGTGA 1 cut(s) 304
AvaI CYCGRG 1 cut(s) 272
AvaII GGWCC 2 cut(s) 705, 1622
BanI GGYRCC 1 cut(s) 611
BbsI GAAGAC 2 cut(s) 1559, 1749
BbvCI CCTCAGC 1 cut(s) 1509
BccI CCATC 6 cut(s) 194, 589, 628, 842, 1135, 1613
BciT130I CCWGG 1 cut(s) 1388
BciVI GTATCC 2 cut(s) 1090, 1492
BcnI CCSGG 3 cut(s) 273, 274, 703
BcoDI GTCTC 4 cut(s) 458, 470, 1151, 1673
BfaI CTAG 1 cut(s) 930
BfmI CTRYAG 2 cut(s) 123, 1335
BfoI RGCGCY 1 cut(s) 522
BfuI GTATCC 2 cut(s) 1090, 1492
BglI GCCNNNNNGGC 1 cut(s) 116
BglII AGATCT 1 cut(s) 950
BlpI GCTNAGC 1 cut(s) 1461
Bme1390I CCNGG 4 cut(s) 273, 274, 703, 1388
Bme18I GGWCC 2 cut(s) 705, 1622
BmeT110I CYCGRG 1 cut(s) 272
BmgT120I GGNCC 2 cut(s) 705, 1622
BmiI GGNNCC 4 cut(s) 613, 706, 707, 1786
BmrFI CCNGG 4 cut(s) 273, 274, 703, 1388
BmsI GCATC 8 cut(s) 316, 406, 633, 963, 1243, 1495, 1601, 1633
BoxI GACNNNNGTC 1 cut(s) 834
BpiI GAAGAC 2 cut(s) 1559, 1749
Bpu10I CCTNAGC 1 cut(s) 1509
Bpu1102I GCTNAGC 1 cut(s) 1461
BpuEI CTTGAG 2 cut(s) 512, 680
BpuMI CCSGG 3 cut(s) 273, 274, 703
BsaBI GATNNNNATC 1 cut(s) 1293
BsaHI GRCGYC 1 cut(s) 1213
BsaI GGTCTC 1 cut(s) 1673
BsaWI WCCGGW 2 cut(s) 289, 1787
BsaXI ACNNNNNCTCC 2 cut(s) 1223, 1253
Bsc4I CCNNNNNNNGG 8 cut(s) 273, 379, 621, 738, 1222, 1327, 1393, 1577
Bse118I RCCGGY 1 cut(s) 742
Bse1I ACTGG 4 cut(s) 719, 800, 1426, 1625
Bse3DI GCAATG 2 cut(s) 1077, 1266
Bse8I GATNNNNATC 1 cut(s) 1293
BseAI TCCGGA 1 cut(s) 1787
BseBI CCWGG 1 cut(s) 1388
BseGI GGATG 4 cut(s) 205, 442, 639, 1648
BseJI GATNNNNATC 1 cut(s) 1293
BseLI CCNNNNNNNGG 8 cut(s) 273, 379, 621, 738, 1222, 1327, 1393, 1577
BseMI GCAATG 2 cut(s) 1077, 1266
BseMII CTCAG 9 cut(s) 245, 599, 891, 1026, 1071, 1475, 1500, 1587, 1599
BseNI ACTGG 4 cut(s) 719, 800, 1426, 1625
BseRI GAGGAG 7 cut(s) 443, 446, 455, 476, 726, 1181, 1220
BseX3I CGGCCG 1 cut(s) 740
BseYI CCCAGC 3 cut(s) 372, 1057, 1751
BsgI GTGCAG 3 cut(s) 117, 149, 1035
Bsh1285I CGRYCG 1 cut(s) 743
BshFI GGCC 6 cut(s) 110, 266, 742, 858, 1489, 1709
BshNI GGYRCC 1 cut(s) 611
BsiEI CGRYCG 1 cut(s) 743
BsiHKCI CYCGRG 1 cut(s) 272
BsiSI CCGG 5 cut(s) 273, 290, 702, 743, 1788
BslFI GGGAC 4 cut(s) 269, 691, 947, 1747
BslI CCNNNNNNNGG 8 cut(s) 273, 379, 621, 738, 1222, 1327, 1393, 1577
BsmAI GTCTC 4 cut(s) 458, 470, 1151, 1673
BsmBI CGTCTC 1 cut(s) 458
BsmFI GGGAC 4 cut(s) 269, 691, 947, 1747
BsmI GAATGC 1 cut(s) 727
BsnI GGCC 6 cut(s) 110, 266, 742, 858, 1489, 1709
Bso31I GGTCTC 1 cut(s) 1673
BsoBI CYCGRG 1 cut(s) 272
Bsp13I TCCGGA 1 cut(s) 1787
Bsp143I GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1558, 1657, 1672
Bsp1720I GCTNAGC 1 cut(s) 1461
Bsp19I CCATGG 1 cut(s) 1710
BspANI GGCC 6 cut(s) 110, 266, 742, 858, 1489, 1709
BspCNI CTCAG 9 cut(s) 244, 598, 892, 1027, 1072, 1474, 1501, 1588, 1598
BspEI TCCGGA 1 cut(s) 1787
BspLI GGNNCC 4 cut(s) 613, 706, 707, 1786
BspMAI CTGCAG 1 cut(s) 1339
BspPI GGATC 4 cut(s) 65, 1192, 1302, 1652
BspT107I GGYRCC 1 cut(s) 611
BspTNI GGTCTC 1 cut(s) 1673
BsrBI CCGCTC 1 cut(s) 1088
BsrDI GCAATG 2 cut(s) 1077, 1266
BsrFI RCCGGY 1 cut(s) 742
BsrI ACTGG 4 cut(s) 719, 800, 1426, 1625
BssAI RCCGGY 1 cut(s) 742
BssMI GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1558, 1657, 1672
BssNAI GTATAC 1 cut(s) 816
BssNI GRCGYC 1 cut(s) 1213
BssT1I CCWWGG 5 cut(s) 615, 692, 1127, 1321, 1710
Bst1107I GTATAC 1 cut(s) 816
Bst2UI CCWGG 1 cut(s) 1388
Bst4CI ACNGT 2 cut(s) 298, 549
Bst6I CTCTTC 3 cut(s) 1102, 1265, 1342
BstACI GRCGYC 1 cut(s) 1213
BstAPI GCANNNNNTGC 1 cut(s) 1006
BstC8I GCNNGC 3 cut(s) 30, 1011, 1090
BstDEI CTNAG 9 cut(s) 231, 585, 900, 1035, 1080, 1461, 1509, 1585, 1596
BstDSI CCRYGG 2 cut(s) 74, 1710
BstENI CCTNNNNNAGG 1 cut(s) 1575
BstF5I GGATG 4 cut(s) 205, 442, 639, 1648
BstH2I RGCGCY 1 cut(s) 522
BstHHI GCGC 3 cut(s) 490, 521, 526
BstKTI GATC 8 cut(s) 73, 760, 953, 1200, 1297, 1561, 1660, 1675
BstMAI GTCTC 4 cut(s) 458, 470, 1151, 1673
BstMBI GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1558, 1657, 1672
BstMCI CGRYCG 1 cut(s) 743
BstNI CCWGG 1 cut(s) 1388
BstPAI GACNNNNGTC 1 cut(s) 834
BstSCI CCNGG 4 cut(s) 271, 272, 701, 1386
BstSFI CTRYAG 2 cut(s) 123, 1335
BstV2I GAAGAC 2 cut(s) 1559, 1749
BstX2I RGATCY 2 cut(s) 950, 1197
BstYI RGATCY 2 cut(s) 950, 1197
BstZ17I GTATAC 1 cut(s) 816
BstZI CGGCCG 1 cut(s) 740
BsuI GTATCC 2 cut(s) 1090, 1492
BsuRI GGCC 6 cut(s) 110, 266, 742, 858, 1489, 1709
BtgI CCRYGG 2 cut(s) 74, 1710
BtgZI GCGATG 1 cut(s) 434
BtsCI GGATG 4 cut(s) 205, 442, 639, 1648
BtsI GCAGTG 1 cut(s) 1455
BtsIMutI CAGTG 2 cut(s) 100, 1455
Cac8I GCNNGC 3 cut(s) 30, 1011, 1090
CaiI CAGNNNCTG 3 cut(s) 1006, 1049, 1378
CfoI GCGC 3 cut(s) 490, 521, 526
Cfr10I RCCGGY 1 cut(s) 742
Cfr13I GGNCC 2 cut(s) 705, 1622
Cfr9I CCCGGG 1 cut(s) 272
CseI GACGC 4 cut(s) 149, 944, 1112, 1221
Csp6I GTAC 2 cut(s) 235, 1429
CviAII CATG 4 cut(s) 247, 1093, 1327, 1711
CviQI GTAC 2 cut(s) 235, 1429
DdeI CTNAG 9 cut(s) 231, 585, 900, 1035, 1080, 1461, 1509, 1585, 1596
DpnI GATC 8 cut(s) 72, 759, 952, 1199, 1296, 1560, 1659, 1674
DpnII GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1558, 1657, 1672
DraI TTTAAA 1 cut(s) 1567
EaeI YGGCCR 2 cut(s) 264, 740
EagI CGGCCG 1 cut(s) 740
Eam1104I CTCTTC 3 cut(s) 1102, 1265, 1342
EarI CTCTTC 3 cut(s) 1102, 1265, 1342
EciI GGCGGA 2 cut(s) 15, 768
EclXI CGGCCG 1 cut(s) 740
Eco130I CCWWGG 5 cut(s) 615, 692, 1127, 1321, 1710
Eco147I AGGCCT 1 cut(s) 858
Eco31I GGTCTC 1 cut(s) 1673
Eco47I GGWCC 2 cut(s) 705, 1622
Eco47III AGCGCT 1 cut(s) 520
Eco52I CGGCCG 1 cut(s) 740
Eco57I CTGAAG 2 cut(s) 32, 1668
Eco88I CYCGRG 1 cut(s) 272
EcoNI CCTNNNNNAGG 1 cut(s) 1575
EcoO109I RGGNCCY 1 cut(s) 705
EcoRI GAATTC 1 cut(s) 349
EcoRII CCWGG 1 cut(s) 1386
EcoT14I CCWWGG 5 cut(s) 615, 692, 1127, 1321, 1710
ErhI CCWWGG 5 cut(s) 615, 692, 1127, 1321, 1710
Esp3I CGTCTC 1 cut(s) 458
FaeI CATG 4 cut(s) 250, 1096, 1330, 1714
FalI AAGNNNNNCTT 4 cut(s) 474, 506, 1305, 1337
FaqI GGGAC 4 cut(s) 269, 691, 947, 1747
FatI CATG 4 cut(s) 246, 1092, 1326, 1710
FauI CCCGC 4 cut(s) 246, 1002, 1081, 1182
FblI GTMKAC 1 cut(s) 815
FokI GGATG 4 cut(s) 212, 449, 646, 1655
FspBI CTAG 1 cut(s) 930
FspI TGCGCA 1 cut(s) 525
GlaI GCGC 3 cut(s) 489, 520, 525
GsaI CCCAGC 3 cut(s) 376, 1061, 1755
HaeII RGCGCY 1 cut(s) 522
HaeIII GGCC 6 cut(s) 110, 266, 742, 858, 1489, 1709
HapII CCGG 5 cut(s) 273, 290, 702, 743, 1788
HgaI GACGC 4 cut(s) 149, 944, 1112, 1221
HhaI GCGC 3 cut(s) 490, 521, 526
Hin1I GRCGYC 1 cut(s) 1213
Hin1II CATG 4 cut(s) 250, 1096, 1330, 1714
Hin6I GCGC 3 cut(s) 488, 519, 524
HinP1I GCGC 3 cut(s) 488, 519, 524
HincII GTYRAC 1 cut(s) 652
HindII GTYRAC 1 cut(s) 652
HindIII AAGCTT 1 cut(s) 893
HinfI GANTC 7 cut(s) 220, 302, 557, 775, 902, 1403, 1581
HpaII CCGG 5 cut(s) 273, 290, 702, 743, 1788
HphI GGTGA 1 cut(s) 304
Hpy166II GTNNAC 4 cut(s) 652, 816, 1455, 1476
Hpy188III TCNNGA 4 cut(s) 1298, 1587, 1670, 1788
Hpy8I GTNNAC 4 cut(s) 652, 816, 1455, 1476
Hpy99I CGWCG 1 cut(s) 1215
HpyCH4III ACNGT 2 cut(s) 298, 549
HpyCH4IV ACGT 1 cut(s) 835
HpyF3I CTNAG 9 cut(s) 231, 585, 900, 1035, 1080, 1461, 1509, 1585, 1596
HpySE526I ACGT 1 cut(s) 835
Hsp92I GRCGYC 1 cut(s) 1213
Hsp92II CATG 4 cut(s) 250, 1096, 1330, 1714
HspAI GCGC 3 cut(s) 488, 519, 524
KflI GGGWCCC 1 cut(s) 705
Kpn2I TCCGGA 1 cut(s) 1787
Kzo9I GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1558, 1657, 1672
LmnI GCTCC 6 cut(s) 16, 1003, 1046, 1207, 1340, 1589
LweI GCATC 8 cut(s) 316, 406, 633, 963, 1243, 1495, 1601, 1633
MaeI CTAG 1 cut(s) 930
MaeII ACGT 1 cut(s) 835
MaeIII GTNAC 1 cut(s) 292
MalI GATC 8 cut(s) 72, 759, 952, 1199, 1296, 1560, 1659, 1674
MbiI CCGCTC 1 cut(s) 1088
MboI GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1558, 1657, 1672
MfeI CAATTG 1 cut(s) 1535
MflI RGATCY 2 cut(s) 950, 1197
MluCI AATT 7 cut(s) 349, 604, 883, 944, 1278, 1535, 1631
MlyI GAGTC 2 cut(s) 911, 1397
MmeI TCCRAC 2 cut(s) 1221, 1592
MroI TCCGGA 1 cut(s) 1787
MseI TTAA 4 cut(s) 336, 603, 876, 1566
MslI CAYNNNNRTG 1 cut(s) 684
MspA1I CMGCKG 4 cut(s) 88, 101, 122, 1189
MspI CCGG 5 cut(s) 273, 290, 702, 743, 1788
MspR9I CCNGG 4 cut(s) 273, 274, 703, 1388
MteI GCGCNGCGC 1 cut(s) 522
MunI CAATTG 1 cut(s) 1535
Mva1269I GAATGC 1 cut(s) 727
MvaI CCWGG 1 cut(s) 1388
NciI CCSGG 3 cut(s) 273, 274, 703
NcoI CCATGG 1 cut(s) 1710
NdeII GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1558, 1657, 1672
NlaIII CATG 4 cut(s) 250, 1096, 1330, 1714
NlaIV GGNNCC 4 cut(s) 613, 706, 707, 1786
NmeAIII GCCGAG 3 cut(s) 130, 718, 1241
NmuCI GTSAC 1 cut(s) 292
NsbI TGCGCA 1 cut(s) 525
PceI AGGCCT 1 cut(s) 858
PcsI WCGNNNNNNNCGW 1 cut(s) 71
PctI GAATGC 1 cut(s) 727
PfeI GAWTC 5 cut(s) 220, 302, 557, 775, 1581
PleI GAGTC 2 cut(s) 910, 1397
PpsI GAGTC 2 cut(s) 910, 1397
PpuMI RGGWCCY 1 cut(s) 705
PshAI GACNNNNGTC 1 cut(s) 834
PshBI ATTAAT 1 cut(s) 876
Psp5II RGGWCCY 1 cut(s) 705
Psp6I CCWGG 1 cut(s) 1386
PspFI CCCAGC 3 cut(s) 372, 1057, 1751
PspGI CCWGG 1 cut(s) 1386
PspN4I GGNNCC 4 cut(s) 613, 706, 707, 1786
PspPI GGNCC 2 cut(s) 705, 1622
PspPPI RGGWCCY 1 cut(s) 705
PstI CTGCAG 1 cut(s) 1339
PstNI CAGNNNCTG 3 cut(s) 1006, 1049, 1378
PsuI RGATCY 2 cut(s) 950, 1197
PvuII CAGCTG 2 cut(s) 101, 122
RsaI GTAC 2 cut(s) 236, 1430
RsaNI GTAC 2 cut(s) 235, 1429
RseI CAYNNNNRTG 1 cut(s) 684
SaqAI TTAA 4 cut(s) 336, 603, 876, 1566
Sau3AI GATC 8 cut(s) 70, 757, 950, 1197, 1294, 1558, 1657, 1672
Sau96I GGNCC 2 cut(s) 705, 1622
SchI GAGTC 2 cut(s) 911, 1397
ScrFI CCNGG 4 cut(s) 273, 274, 703, 1388
SfaNI GCATC 8 cut(s) 316, 406, 633, 963, 1243, 1495, 1601, 1633
SfcI CTRYAG 2 cut(s) 123, 1335
SinI GGWCC 2 cut(s) 705, 1622
SmaI CCCGGG 1 cut(s) 274
SmiMI CAYNNNNRTG 1 cut(s) 684
SmlI CTYRAG 2 cut(s) 491, 659
SmoI CTYRAG 2 cut(s) 491, 659
Sse9I AATT 7 cut(s) 349, 604, 883, 944, 1278, 1535, 1631
SseBI AGGCCT 1 cut(s) 858
SspMI CTAG 1 cut(s) 930
StuI AGGCCT 1 cut(s) 858
StyD4I CCNGG 4 cut(s) 271, 272, 701, 1386
StyI CCWWGG 5 cut(s) 615, 692, 1127, 1321, 1710
TaaI ACNGT 2 cut(s) 298, 549
TaiI ACGT 1 cut(s) 838
TaqI TCGA 4 cut(s) 65, 305, 353, 1671
TasI AATT 7 cut(s) 349, 604, 883, 944, 1278, 1535, 1631
TatI WGTACW 1 cut(s) 1428
TauI GCSGC 2 cut(s) 8, 47
TfiI GAWTC 5 cut(s) 220, 302, 557, 775, 1581
Tru1I TTAA 4 cut(s) 336, 603, 876, 1566
Tru9I TTAA 4 cut(s) 336, 603, 876, 1566
TscAI CASTG 2 cut(s) 100, 1462
TseFI GTSAC 1 cut(s) 292
Tsp45I GTSAC 1 cut(s) 292
TspDTI ATGAA 3 cut(s) 212, 1565, 1754
TspGWI ACGGA 3 cut(s) 63, 138, 1190
TspMI CCCGGG 1 cut(s) 272
TspRI CASTG 2 cut(s) 100, 1462
VpaK11BI GGWCC 2 cut(s) 705, 1622
VspI ATTAAT 1 cut(s) 876
XagI CCTNNNNNAGG 1 cut(s) 1575
XapI RAATTY 2 cut(s) 349, 1631
XmaI CCCGGG 1 cut(s) 272
XmiI GTMKAC 1 cut(s) 815
XspI CTAG 1 cut(s) 930
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.