Prupe.6G190500_v2.0.a1

SNW SKI-interacting

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0010126
Physical Location & Seq
Reverse (-)
19775526 .. 19778399
2874 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G190500.1

Sequence Viewer

Length: 1821 bp
ATGGCAGCTCTAAAGGAGCTTCTGCCGCCTGCACAATCAACCACAACAACTTACTATGACCACTCAAATGATCCGTGGTTCAAGCAGCGCTTCAGTTCAGCTGAGGAAGAAAAATCCTCTGTCATCAAGCCTAATCCTGTACCTCCTTACTTGAAGCGTCAAGGCTTTGTACCTAGGAAGGTAGAGGATTTTGGGGATGGGGGTGCTTTCCCTGAGATTCACATAGCTCAGTATCCTCTTGGCATGGGCAGGGACAAGTCCACAAAACTTGGAACGAAGATACTTCCAGTCACTGTTGATGCACATGGAAACATTGCGTATGATGCTATTGTTAAGCAGAATGAGAATTCAAAAAAGATTGTCTACTCTCAACATAAGGATCTTGTGCCTAAAATTTTGAAAAATGAGGAAGAGGAAGAGGATGATGATGAAGAGGAGGAGCTGCAGAAAGAGATTGAAGAAACGACAGCTGAAACAAAGGCTGCGCTTGAGAAGATTGTGAATGTGAGATTGAGCGCTGCGCAGCCAAAAAATGTACCCAAACAGTCGTCAGACTCAAAATTTATCAAGTATAAGCCATCACAGAAATCAGTGGCATTTAATTCTGGTGCCAAGGAGAGGATTATCAGGATGGTGGAGATGCCTGTGGATCCACTTGAGCCTCCTAAGTTCAAGCATAAGCGTGTCCCTAGGGCTTCTGGGTCCCCACCAGTGCCAGTCATGCATTCCCCTCCTCGTCCAGTGACCGTAAAAGACCAGCAGGATTGGAAGATTCCACCTTGCATTTCTAACTGGAAGAACCCGAAAGGGTACACCATCCCATTGGACAAACGTCTAGCAGCTGATGGGAGAGGCCTTCAGGATGTTCAGATTAATGATAATTTTGCAAAGCTTTCCGAGTCTTTGTATGTAGCAGAGCAGAAGGCTAGAGAAGCAGTTGCAATGAGATCTAAAGTTCAGAAGGAGATGATAATGAAGGAGAAGGAAAAGAAAGAGCAGGAGCTGAGGGCATTAGCTCAAAAAGCTCGTTCTGAGAGGACAGGTGCAGCACCTCCTGCTTCTGTCCCTATGCCTTCTGATAAAACAACAATGGATACTGATATGAGAGGGGATTATGAGCGTCCAAGGGAAAAGGAGACAGATTACCCAAAGGAGACAAGGGAGGAAAGAGAAGAGAGGTTGCAGCGCGAAAAGATTCGGGAGGAGCGACGCCGAGAAAGGGAAAGGGAGAGAAGGTTGGAAGCCAAAGATGCAGCGATGGGAAAGAAGAGTAAAATTACTAGAGACAGAGATCGTGATATTAGTGAGAAAGTTGCCCTTGGCATGGCTTCTGCTGGAGCAGGAAGAGGGGGAGAGGTCATGTATGACCAGAGGCTGTTCAACCAGGAGAAAGGAATGGACTCTGGTTTTGCCACTGATGACCAGTACAATGTCTATGACAGAGGCTTGTTTACTGCTCAGCCTACACTCTCAACCCTGTACAGGCCAAAGAAGGATGCTGATGCTGATATGTATGGAGGTGCTGATGAGCAGATGGATAAGATTATGAAGACTGATCGCTTCAAACCGGACAAAGGATTTGGGGGAGCTGCTGAGAGGAGCGGTCCAAGAGATAGGCCGGTTGAGTTTGAGAAGGATGTTGAAGAAGCCGATCCATTTGGTCTGGACCAGTTCTTGACAGAGGTGAAGAAGGGTAAGAAGGCCATGGAAAAAGTTGGTACAGGAGGAACAATGAGAGCGAGTGCTGGGTCTTCAATGCGAGATGGCCATGAAGGCGGGGGCTCCAGCCGAACTCGTATTGGGTTTGAAAGGGGTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000122 GO:0000350 GO:0000375 GO:0000377 GO:0000393 GO:0000398 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003712 GO:0003713 GO:0003714 GO:0003723 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006970 GO:0006974 GO:0007154 GO:0007165 GO:0007275 GO:0007399 GO:0008134 GO:0008150 GO:0008152 GO:0008219 GO:0008380 GO:0008630 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010555 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0010646 GO:0010647 GO:0010720 GO:0012501 GO:0016043 GO:0016070 GO:0016071 GO:0016363 GO:0017015 GO:0019219 GO:0019222 GO:0022008 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0030511 GO:0030522 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032101 GO:0032104 GO:0032107 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033120 GO:0033554 GO:0033993 GO:0034399 GO:0034622 GO:0034641 GO:0035257 GO:0035556 GO:0036002 GO:0042221 GO:0042752 GO:0042771 GO:0042809 GO:0042974 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045595 GO:0045597 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046332 GO:0046483 GO:0048024 GO:0048026 GO:0048384 GO:0048385 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048584 GO:0048608 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050684 GO:0050685 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0051254 GO:0051427 GO:0051569 GO:0051571 GO:0051716 GO:0051960 GO:0051962 GO:0060255 GO:0060284 GO:0061458 GO:0065003 GO:0065007 GO:0070013 GO:0070562 GO:0071007 GO:0071013 GO:0071014 GO:0071141 GO:0071704 GO:0071826 GO:0071840 GO:0072331 GO:0072332 GO:0080090 GO:0090092 GO:0090100 GO:0090287 GO:0090304 GO:0097159 GO:0097190 GO:0097193 GO:0097305 GO:0140110 GO:1901360 GO:1901363 GO:1901700 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903507 GO:1903508 GO:1903844 GO:1903846 GO:1905269 GO:1990904 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03040 ko04330 ko05169 ko05203 map03040 map04330 map05169 map05203
Pfam Domains
Protein Families
SKIP_SNW

Protein Analysis

607

Amino Acids

68.48

Weight (kDa)

8.87

Isoelectric Point (pI)

47.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G77180 AT1G77180 AT1G77180
fragaria_vesca FvH4_1g05870 FvH4_1g05870
malus_domestica MD02G1060800.v1.1 MD15G1194300.v1.1
prunus_persica Prupe.6G190500_v2.0.a1
pyrus_communis pycom02g04990 pycom15g17390
rosa_chinensis RchiOBHm_Chr2g0091531 RchiOBHm_Chr2g0091611
rosa_laevigata RLG00000016233
rosa_multiflora Rmu_sc0002407.1_g000004
rosa_roxburghii Rroxscaffold_2G00149960
rosa_rugosa Rorug02G0018500
rosa_samantha Rh2AG063700 Rh2BG063100 Rh2CG064800 Rh2DG063200
rosa_wichuraiana Rw2G005670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 522
AccB1I GGYRCC 1 cut(s) 608
AccBSI CCGCTC 1 cut(s) 1602
AccI GTMKAC 1 cut(s) 363
AccII CGCG 1 cut(s) 1188
AciI CCGC 3 cut(s) 26, 1602, 1776
AclWI GGATC 5 cut(s) 65, 387, 644, 657, 1646
AcoI YGGCCR 1 cut(s) 1765
AcsI RAATTY 3 cut(s) 346, 393, 560
AcuI CTGAAG 2 cut(s) 76, 842
AcyI GRCGYC 1 cut(s) 1210
AfaI GTAC 7 cut(s) 141, 171, 537, 812, 1427, 1481, 1720
AfeI AGCGCT 2 cut(s) 89, 517
AfiI CCNNNNNNNGG 5 cut(s) 618, 1219, 1324, 1482, 1574
AjnI CCWGG 1 cut(s) 1383
Alw26I GTCTC 3 cut(s) 1130, 1148, 1278
AlwI GGATC 5 cut(s) 65, 387, 644, 657, 1646
AlwNI CAGNNNCTG 3 cut(s) 293, 1003, 1375
Aor51HI AGCGCT 2 cut(s) 89, 517
AoxI GGCC 5 cut(s) 853, 1484, 1616, 1701, 1765
ApoI RAATTY 3 cut(s) 346, 393, 560
ArsI GACNNNNNNTTYG 4 cut(s) 1391, 1423, 1562, 1594
AseI ATTAAT 1 cut(s) 873
Asp700I GAANNNNTTC 1 cut(s) 1194
AspA2I CCTAGG 2 cut(s) 173, 689
AspLEI GCGC 5 cut(s) 90, 487, 518, 523, 1188
AspS9I GGNCC 3 cut(s) 702, 1604, 1666
AsuHPI GGTGA 1 cut(s) 1696
AvaII GGWCC 3 cut(s) 702, 1604, 1666
AvrII CCTAGG 2 cut(s) 173, 689
BalI TGGCCA 1 cut(s) 1767
BamHI GGATCC 1 cut(s) 649
BanI GGYRCC 1 cut(s) 608
BanII GRGCYC 1 cut(s) 1784
BbsI GAAGAC 2 cut(s) 1556, 1743
BbvCI CCTCAGC 2 cut(s) 102, 1004
BccI CCATC 8 cut(s) 191, 586, 625, 824, 839, 1252, 1528, 1757
BciT130I CCWGG 1 cut(s) 1385
BciVI GTATCC 2 cut(s) 243, 1087
BcoDI GTCTC 3 cut(s) 1130, 1148, 1278
BfaI CTAG 5 cut(s) 174, 690, 836, 927, 1281
BfmI CTRYAG 1 cut(s) 443
BfoI RGCGCY 2 cut(s) 91, 519
BfuI GTATCC 2 cut(s) 243, 1087
BglI GCCNNNNNGGC 1 cut(s) 1773
BglII AGATCT 1 cut(s) 947
BlnI CCTAGG 2 cut(s) 173, 689
BlpI GCTNAGC 1 cut(s) 1458
Bme1390I CCNGG 1 cut(s) 1385
Bme18I GGWCC 3 cut(s) 702, 1604, 1666
BmgT120I GGNCC 3 cut(s) 702, 1604, 1666
BmiI GGNNCC 5 cut(s) 610, 651, 703, 704, 1783
BmrFI CCNGG 1 cut(s) 1385
BmsI GCATC 6 cut(s) 289, 313, 630, 1240, 1486, 1492
BoxI GACNNNNGTC 1 cut(s) 831
BpiI GAAGAC 2 cut(s) 1556, 1743
BpmI CTGGAG 2 cut(s) 1356, 1768
Bpu10I CCTNAGC 2 cut(s) 102, 1004
Bpu1102I GCTNAGC 1 cut(s) 1458
BpuEI CTTGAG 2 cut(s) 509, 677
BsaHI GRCGYC 1 cut(s) 1210
BsaJI CCNNGG 7 cut(s) 74, 173, 612, 689, 1124, 1318, 1704
BsaWI WCCGGW 1 cut(s) 1567
BsaXI ACNNNNNCTCC 2 cut(s) 1220, 1250
Bsc4I CCNNNNNNNGG 5 cut(s) 618, 1219, 1324, 1482, 1574
Bse118I RCCGGY 1 cut(s) 1618
Bse1I ACTGG 7 cut(s) 287, 710, 716, 740, 797, 1423, 1669
Bse3DI GCAATG 2 cut(s) 312, 948
BseBI CCWGG 1 cut(s) 1385
BseDI CCNNGG 7 cut(s) 74, 173, 612, 689, 1124, 1318, 1704
BseGI GGATG 7 cut(s) 202, 427, 636, 816, 868, 1501, 1642
BseLI CCNNNNNNNGG 5 cut(s) 618, 1219, 1324, 1482, 1574
BseMI GCAATG 2 cut(s) 312, 948
BseMII CTCAG 7 cut(s) 93, 204, 242, 995, 1023, 1472, 1584
BseNI ACTGG 7 cut(s) 287, 710, 716, 740, 797, 1423, 1669
BseRI GAGGAG 5 cut(s) 449, 452, 723, 1217, 1612
BseYI CCCAGC 1 cut(s) 1745
BsgI GTGCAG 2 cut(s) 15, 1065
Bsh1236I CGCG 1 cut(s) 1188
BshFI GGCC 5 cut(s) 855, 1486, 1618, 1703, 1767
BshNI GGYRCC 1 cut(s) 608
BsiSI CCGG 2 cut(s) 1568, 1619
BslFI GGGAC 4 cut(s) 266, 671, 688, 1049
BslI CCNNNNNNNGG 5 cut(s) 618, 1219, 1324, 1482, 1574
BsmAI GTCTC 3 cut(s) 1130, 1148, 1278
BsmFI GGGAC 4 cut(s) 266, 671, 688, 1049
BsmI GAATGC 1 cut(s) 724
BsnI GGCC 5 cut(s) 855, 1486, 1618, 1703, 1767
Bsp1286I GDGCHC 1 cut(s) 1784
Bsp1407I TGTACA 1 cut(s) 1479
Bsp143I GATC 7 cut(s) 70, 379, 649, 947, 1291, 1555, 1651
Bsp1720I GCTNAGC 1 cut(s) 1458
Bsp19I CCATGG 1 cut(s) 1704
BspACI CCGC 3 cut(s) 26, 1602, 1776
BspANI GGCC 5 cut(s) 855, 1486, 1618, 1703, 1767
BspCNI CTCAG 7 cut(s) 94, 205, 241, 996, 1024, 1471, 1585
BspFNI CGCG 1 cut(s) 1188
BspLI GGNNCC 5 cut(s) 610, 651, 703, 704, 1783
BspMAI CTGCAG 1 cut(s) 447
BspPI GGATC 5 cut(s) 65, 387, 644, 657, 1646
BspT107I GGYRCC 1 cut(s) 608
BsrBI CCGCTC 1 cut(s) 1602
BsrDI GCAATG 2 cut(s) 312, 948
BsrFI RCCGGY 1 cut(s) 1618
BsrGI TGTACA 1 cut(s) 1479
BsrI ACTGG 7 cut(s) 287, 710, 716, 740, 797, 1423, 1669
BssAI RCCGGY 1 cut(s) 1618
BssECI CCNNGG 7 cut(s) 74, 173, 612, 689, 1124, 1318, 1704
BssMI GATC 7 cut(s) 70, 379, 649, 947, 1291, 1555, 1651
BssNI GRCGYC 1 cut(s) 1210
BssT1I CCWWGG 6 cut(s) 173, 612, 689, 1124, 1318, 1704
Bst2UI CCWGG 1 cut(s) 1385
Bst4CI ACNGT 3 cut(s) 295, 546, 748
Bst6I CTCTTC 6 cut(s) 405, 411, 426, 1167, 1262, 1339
BstACI GRCGYC 1 cut(s) 1210
BstAPI GCANNNNNTGC 1 cut(s) 1055
BstAUI TGTACA 1 cut(s) 1479
BstC8I GCNNGC 1 cut(s) 30
BstDEI CTNAG 8 cut(s) 102, 213, 228, 666, 1004, 1032, 1458, 1593
BstDSI CCRYGG 2 cut(s) 74, 1704
BstF5I GGATG 7 cut(s) 202, 427, 636, 816, 868, 1501, 1642
BstFNI CGCG 1 cut(s) 1188
BstH2I RGCGCY 2 cut(s) 91, 519
BstHHI GCGC 5 cut(s) 90, 487, 518, 523, 1188
BstKTI GATC 7 cut(s) 73, 382, 652, 950, 1294, 1558, 1654
BstMAI GTCTC 3 cut(s) 1130, 1148, 1278
BstMBI GATC 7 cut(s) 70, 379, 649, 947, 1291, 1555, 1651
BstMWI GCNNNNNNNGC 8 cut(s) 25, 323, 721, 932, 1022, 1055, 1250, 1773
BstNI CCWGG 1 cut(s) 1385
BstPAI GACNNNNGTC 1 cut(s) 831
BstSCI CCNGG 1 cut(s) 1383
BstSFI CTRYAG 1 cut(s) 443
BstUI CGCG 1 cut(s) 1188
BstV2I GAAGAC 2 cut(s) 1556, 1743
BstX2I RGATCY 3 cut(s) 379, 649, 947
BstXI CCANNNNNNTGG 1 cut(s) 823
BstYI RGATCY 3 cut(s) 379, 649, 947
BsuI GTATCC 2 cut(s) 243, 1087
BsuRI GGCC 5 cut(s) 855, 1486, 1618, 1703, 1767
BtgI CCRYGG 2 cut(s) 74, 1704
BtgZI GCGATG 1 cut(s) 1271
BtsCI GGATG 7 cut(s) 202, 427, 636, 816, 868, 1501, 1642
BtsIMutI CAGTG 5 cut(s) 291, 597, 717, 747, 1413
Cac8I GCNNGC 1 cut(s) 30
CaiI CAGNNNCTG 3 cut(s) 293, 1003, 1375
CfoI GCGC 5 cut(s) 90, 487, 518, 523, 1188
Cfr10I RCCGGY 1 cut(s) 1618
Cfr13I GGNCC 3 cut(s) 702, 1604, 1666
CseI GACGC 3 cut(s) 146, 1109, 1218
Csp6I GTAC 7 cut(s) 140, 170, 536, 811, 1426, 1480, 1719
CspCI CAANNNNNGTGG 2 cut(s) 250, 285
CviAII CATG 7 cut(s) 244, 305, 721, 1324, 1360, 1705, 1769
CviQI GTAC 7 cut(s) 140, 170, 536, 811, 1426, 1480, 1719
DdeI CTNAG 8 cut(s) 102, 213, 228, 666, 1004, 1032, 1458, 1593
DpnI GATC 7 cut(s) 72, 381, 651, 949, 1293, 1557, 1653
DpnII GATC 7 cut(s) 70, 379, 649, 947, 1291, 1555, 1651
EaeI YGGCCR 1 cut(s) 1765
Eam1104I CTCTTC 6 cut(s) 405, 411, 426, 1167, 1262, 1339
EarI CTCTTC 6 cut(s) 405, 411, 426, 1167, 1262, 1339
Eco130I CCWWGG 6 cut(s) 173, 612, 689, 1124, 1318, 1704
Eco147I AGGCCT 1 cut(s) 855
Eco24I GRGCYC 1 cut(s) 1784
Eco47I GGWCC 3 cut(s) 702, 1604, 1666
Eco47III AGCGCT 2 cut(s) 89, 517
Eco57I CTGAAG 2 cut(s) 76, 842
EcoO109I RGGNCCY 1 cut(s) 702
EcoRI GAATTC 1 cut(s) 346
EcoRII CCWGG 1 cut(s) 1383
EcoT14I CCWWGG 6 cut(s) 173, 612, 689, 1124, 1318, 1704
EcoT22I ATGCAT 1 cut(s) 726
EcoT38I GRGCYC 1 cut(s) 1784
ErhI CCWWGG 6 cut(s) 173, 612, 689, 1124, 1318, 1704
FaeI CATG 7 cut(s) 247, 308, 724, 1327, 1363, 1708, 1772
FalI AAGNNNNNCTT 4 cut(s) 74, 106, 1302, 1334
FaqI GGGAC 4 cut(s) 266, 671, 688, 1049
FatI CATG 7 cut(s) 243, 304, 720, 1323, 1359, 1704, 1768
FauI CCCGC 1 cut(s) 1769
FblI GTMKAC 1 cut(s) 363
FokI GGATG 7 cut(s) 209, 434, 643, 803, 875, 1508, 1649
FriOI GRGCYC 1 cut(s) 1784
FspBI CTAG 5 cut(s) 174, 690, 836, 927, 1281
FspI TGCGCA 1 cut(s) 522
GlaI GCGC 5 cut(s) 89, 486, 517, 522, 1187
GsaI CCCAGC 1 cut(s) 1749
GsuI CTGGAG 2 cut(s) 1356, 1768
HaeII RGCGCY 2 cut(s) 91, 519
HaeIII GGCC 5 cut(s) 855, 1486, 1618, 1703, 1767
HapII CCGG 2 cut(s) 1568, 1619
HgaI GACGC 3 cut(s) 146, 1109, 1218
HhaI GCGC 5 cut(s) 90, 487, 518, 523, 1188
Hin1I GRCGYC 1 cut(s) 1210
Hin1II CATG 7 cut(s) 247, 308, 724, 1327, 1363, 1708, 1772
Hin6I GCGC 5 cut(s) 88, 485, 516, 521, 1186
HinP1I GCGC 5 cut(s) 88, 485, 516, 521, 1186
HindIII AAGCTT 1 cut(s) 890
HinfI GANTC 6 cut(s) 217, 554, 772, 899, 1195, 1400
HpaII CCGG 2 cut(s) 1568, 1619
HphI GGTGA 1 cut(s) 1696
Hpy166II GTNNAC 4 cut(s) 261, 364, 813, 1452
Hpy188I TCNGA 6 cut(s) 553, 870, 898, 960, 1033, 1078
Hpy188III TCNNGA 6 cut(s) 628, 860, 1199, 1295, 1664, 1675
Hpy8I GTNNAC 4 cut(s) 261, 364, 813, 1452
Hpy99I CGWCG 1 cut(s) 1212
HpyCH4III ACNGT 3 cut(s) 295, 546, 748
HpyCH4IV ACGT 1 cut(s) 832
HpyF10VI GCNNNNNNNGC 8 cut(s) 25, 323, 721, 932, 1022, 1055, 1250, 1773
HpyF3I CTNAG 8 cut(s) 102, 213, 228, 666, 1004, 1032, 1458, 1593
HpySE526I ACGT 1 cut(s) 832
Hsp92I GRCGYC 1 cut(s) 1210
Hsp92II CATG 7 cut(s) 247, 308, 724, 1327, 1363, 1708, 1772
HspAI GCGC 5 cut(s) 88, 485, 516, 521, 1186
KflI GGGWCCC 1 cut(s) 702
Kzo9I GATC 7 cut(s) 70, 379, 649, 947, 1291, 1555, 1651
LmnI GCTCC 8 cut(s) 16, 439, 1000, 1204, 1337, 1586, 1599, 1787
LweI GCATC 6 cut(s) 289, 313, 630, 1240, 1486, 1492
MaeI CTAG 5 cut(s) 174, 690, 836, 927, 1281
MaeII ACGT 1 cut(s) 832
MaeIII GTNAC 2 cut(s) 289, 742
MalI GATC 7 cut(s) 72, 381, 651, 949, 1293, 1557, 1653
MbiI CCGCTC 1 cut(s) 1602
MboI GATC 7 cut(s) 70, 379, 649, 947, 1291, 1555, 1651
MflI RGATCY 3 cut(s) 379, 649, 947
MhlI GDGCHC 1 cut(s) 1784
MlsI TGGCCA 1 cut(s) 1767
MluCI AATT 6 cut(s) 346, 393, 560, 601, 880, 1275
MluNI TGGCCA 1 cut(s) 1767
MlyI GAGTC 3 cut(s) 548, 908, 1394
MmeI TCCRAC 1 cut(s) 1218
Mox20I TGGCCA 1 cut(s) 1767
Mph1103I ATGCAT 1 cut(s) 726
MroXI GAANNNNTTC 1 cut(s) 1194
MscI TGGCCA 1 cut(s) 1767
MseI TTAA 3 cut(s) 333, 600, 873
MslI CAYNNNNRTG 2 cut(s) 66, 681
Msp20I TGGCCA 1 cut(s) 1767
MspA1I CMGCKG 3 cut(s) 101, 470, 842
MspI CCGG 2 cut(s) 1568, 1619
MspR9I CCNGG 1 cut(s) 1385
MteI GCGCNGCGC 1 cut(s) 519
Mva1269I GAATGC 1 cut(s) 724
MvaI CCWGG 1 cut(s) 1385
MvnI CGCG 1 cut(s) 1188
MwoI GCNNNNNNNGC 8 cut(s) 25, 323, 721, 932, 1022, 1055, 1250, 1773
NcoI CCATGG 1 cut(s) 1704
NdeII GATC 7 cut(s) 70, 379, 649, 947, 1291, 1555, 1651
NlaIII CATG 7 cut(s) 247, 308, 724, 1327, 1363, 1708, 1772
NlaIV GGNNCC 5 cut(s) 610, 651, 703, 704, 1783
NmeAIII GCCGAG 1 cut(s) 1238
NmuCI GTSAC 2 cut(s) 289, 742
NsbI TGCGCA 1 cut(s) 522
NsiI ATGCAT 1 cut(s) 726
PceI AGGCCT 1 cut(s) 855
PcsI WCGNNNNNNNCGW 1 cut(s) 1204
PctI GAATGC 1 cut(s) 724
PdmI GAANNNNTTC 1 cut(s) 1194
PfeI GAWTC 3 cut(s) 217, 772, 1195
PleI GAGTC 3 cut(s) 548, 907, 1394
PpsI GAGTC 3 cut(s) 548, 907, 1394
PpuMI RGGWCCY 1 cut(s) 702
PshAI GACNNNNGTC 1 cut(s) 831
PshBI ATTAAT 1 cut(s) 873
Psp5II RGGWCCY 1 cut(s) 702
Psp6I CCWGG 1 cut(s) 1383
PspFI CCCAGC 1 cut(s) 1745
PspGI CCWGG 1 cut(s) 1383
PspN4I GGNNCC 5 cut(s) 610, 651, 703, 704, 1783
PspPI GGNCC 3 cut(s) 702, 1604, 1666
PspPPI RGGWCCY 1 cut(s) 702
PstI CTGCAG 1 cut(s) 447
PstNI CAGNNNCTG 3 cut(s) 293, 1003, 1375
PsuI RGATCY 3 cut(s) 379, 649, 947
PvuII CAGCTG 3 cut(s) 101, 470, 842
RsaI GTAC 7 cut(s) 141, 171, 537, 812, 1427, 1481, 1720
RsaNI GTAC 7 cut(s) 140, 170, 536, 811, 1426, 1480, 1719
RseI CAYNNNNRTG 2 cut(s) 66, 681
SaqAI TTAA 3 cut(s) 333, 600, 873
Sau3AI GATC 7 cut(s) 70, 379, 649, 947, 1291, 1555, 1651
Sau96I GGNCC 3 cut(s) 702, 1604, 1666
SchI GAGTC 3 cut(s) 548, 908, 1394
ScrFI CCNGG 1 cut(s) 1385
SduI GDGCHC 1 cut(s) 1784
SfaNI GCATC 6 cut(s) 289, 313, 630, 1240, 1486, 1492
SfcI CTRYAG 1 cut(s) 443
SinI GGWCC 3 cut(s) 702, 1604, 1666
SmiMI CAYNNNNRTG 2 cut(s) 66, 681
SmlI CTYRAG 2 cut(s) 488, 656
SmoI CTYRAG 2 cut(s) 488, 656
Sse9I AATT 6 cut(s) 346, 393, 560, 601, 880, 1275
SseBI AGGCCT 1 cut(s) 855
SsiI CCGC 3 cut(s) 26, 1602, 1776
SspMI CTAG 5 cut(s) 174, 690, 836, 927, 1281
StuI AGGCCT 1 cut(s) 855
StyD4I CCNGG 1 cut(s) 1383
StyI CCWWGG 6 cut(s) 173, 612, 689, 1124, 1318, 1704
TaaI ACNGT 3 cut(s) 295, 546, 748
TaiI ACGT 1 cut(s) 835
TasI AATT 6 cut(s) 346, 393, 560, 601, 880, 1275
TatI WGTACW 2 cut(s) 1425, 1479
TauI GCSGC 1 cut(s) 28
TfiI GAWTC 3 cut(s) 217, 772, 1195
Tru1I TTAA 3 cut(s) 333, 600, 873
Tru9I TTAA 3 cut(s) 333, 600, 873
TscAI CASTG 5 cut(s) 298, 597, 717, 747, 1420
TseFI GTSAC 2 cut(s) 289, 742
Tsp45I GTSAC 2 cut(s) 289, 742
TspDTI ATGAA 4 cut(s) 444, 989, 1562, 1785
TspGWI ACGGA 1 cut(s) 63
TspRI CASTG 5 cut(s) 298, 597, 717, 747, 1420
VpaK11BI GGWCC 3 cut(s) 702, 1604, 1666
VspI ATTAAT 1 cut(s) 873
XapI RAATTY 3 cut(s) 346, 393, 560
XmaJI CCTAGG 2 cut(s) 173, 689
XmiI GTMKAC 1 cut(s) 363
XmnI GAANNNNTTC 1 cut(s) 1194
XspI CTAG 5 cut(s) 174, 690, 836, 927, 1281
Zsp2I ATGCAT 1 cut(s) 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.