AT1G78540

Encodes a protein that contains an SH2 domain. It can pull down a 120-kD tyrosine-phosphorylated protein in vitro. It is

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0004620
Physical Location & Seq
Reverse (-)
29540984 .. 29544875
3892 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G78540.3

Sequence Viewer

Length: 2007 bp
ATGGCGAGTGCAGCTACAATTGAGACGGAGAAATACTCCTTATTAGAAGATTTTAATGTTGATGTTGAAGTAGACGATGAAGAATACGAAAGTTTCTCCCTTTGTTTCTGGGTTTATCTTCTTAATTCCACCACATTCCCATCTACCATCATTAGACAGGTTCACTCAGACATGAGTGTTAGTGCACCTTTCCTTGTGCTAGATGAAAACAAGAAGATGATGCTTTTGCCATTGACTCTCCTTCACAAGGAAGCTCCTGATCCTGTAGACACTTCTTCCTGGACACAAGTTCCTAGCGTTTCTACAAAATCCAAGTTTCCTCTTGAAAAATGGGTTCATGTGGGTTGTGAGGTTTCTAGAAATTTTATGAGGCTTTTTATTGATGGAAATATGGAAGGAGAGCAGTTCGTGACTTCTTTGCTGACAAAGAACGCCTATCCCGAGTGTCCTCGAAAGATATCGCTATTTAGTGTTGGCGGAGATGGTTATAGCGTACAAGGTTTCATCCAATGTGCAGAAGTCTTACCTGCTAGTGATCACGTGGAGCATCATTATATGAAGGACCCACCTCTAATGTTATCTGTCAATAAATCATCCTCATCGGGGATCAAATTAGATGATTGTGGTGTTTGGCAGGCATCTTGCAAGGAGATGTTTTCCTTGGATGTTCTTTTATCCAATGCCATTGGCCAGCCTGTGCACAAGGATGTGGAGGTTGTTGCATCACTACTGTATGCCGATACACTTCCGGAGGCCAAGATGGGTGAAGCTGAGGCTCCTCTTTTGATAAGAGATGAAGGAGTTCAATTCTCATCTGATGATAGACCGATCAAACTATTAAATGGACGCTCATCCTTTAAGCTAAAGATCTCTCAGCTTTCCTCCAATAGTGATGACAGATTGTTCTGGATTAAATTTGGAATACGAAATGCTAAAGATTATCCTTTCCTTCAAGCTGTTTCCAATCCAATCCGTTGCATTTCGGTCAGTCCTGAAGTCCAGCCAGTTTCAGTTACTCCGAAAAGGTTGACCAATATTGACCATCTATCAAGTACCGAATCCCCGGATCTTCTACAGAACACTTCGTCAGTTAAACGAATCAGGTTGGGAAAAGAAAGTGTTTCTGGAAGCGAGGAATCATATCAACAATGCAACTCTCATCCTCAAACCTCGAGACAGTTTGAGAACGGAAATGGCATGAGATTGCACGAAGAAGATAACTCCTCAATTGATTCAGAGAACTCGGAAATGAGATACACAATCTCAGATTCCACCATCTTTAAGTACTGCCTTGGAAACTTAATCGACAAAGCTCTACTTCTAAAGGAAATCACAAACAACTCATCAGACGATGAAGTTTTGGAATTTGCAAATCAGGTTTCTCTGTACTCTGGATGTTCACACCATAGCTATCAAATCAACATGGCAAGAGAGCTAATAGCAGAAGGAACAAATGCATGGATATTGATATCTCGGAACAATCAACATGTTCATTGGGATAATGTGGTCTATGAGATTGAAGAACATTTCATGAGGATTTCAAAATGCAGCAGTAGATCTCTCACCCACCAGGATTTTGAGCTTCTAAGGAGAATATCAGGATGCTACGAGTACATAACTCAGGAGAATTTTGAGAAAATGTGGTGTTGGTTGTTCCCTGTTGCTTACTCCATATCCCGGGGCTTGATAAACGGAATGTGGCGTTCTTCATCGCCTAAATGGATTGAAGGATTCATCACCAAGGAAGAAGCTGAACATTCGCTTCAAGGCCAAGAACCAGGAACCTTCATACTACGTTTCCCTATTTCAAGAACTTGGCCTCACCCTGATGCTGGTAGTTTGGTTGTGACTTATGTCGGTCATGATTTCGCTCTTCATCATAAGCAACTCAAGATCGATAACATCTGCGAAAGTAGTGAAAGGTACATGGATGCAAAACCGCTGCAGGATATGTTGTTGGCTGAACCTGAGCTCTCTCGGTTAGGAAGGATCAAAAGAAGCCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Laminin_G_3

Protein Analysis

668

Amino Acids

75.81

Weight (kDa)

5.29

Isoelectric Point (pI)

45.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Laminin_G_3 PF13385 30 - 143 9.2e-06 Concanavalin A-like lectin/glucanases superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 535
AccI GTMKAC 2 cut(s) 72, 267
AccIII TCCGGA 1 cut(s) 748
AciI CCGC 2 cut(s) 477, 1940
AclWI GGATC 4 cut(s) 254, 614, 1074, 1997
AcoI YGGCCR 1 cut(s) 688
AcsI RAATTY 4 cut(s) 361, 914, 1364, 1627
AcuI CTGAAG 1 cut(s) 1014
AcvI CACGTG 1 cut(s) 541
AfaI GTAC 6 cut(s) 495, 1054, 1286, 1388, 1613, 1925
AfiI CCNNNNNNNGG 4 cut(s) 247, 603, 1677, 1832
AflIII ACRYGT 1 cut(s) 1486
AgsI TTSAA 9 cut(s) 68, 326, 806, 953, 1520, 1542, 1727, 1766, 1809
AjnI CCWGG 3 cut(s) 278, 1569, 1777
Alw21I GWGCWC 3 cut(s) 187, 702, 1974
Alw26I GTCTC 2 cut(s) 17, 1168
Alw44I GTGCAC 2 cut(s) 183, 698
AlwI GGATC 4 cut(s) 254, 614, 1074, 1997
Ama87I CYCGRG 3 cut(s) 440, 1171, 1677
Aor13HI TCCGGA 1 cut(s) 748
AoxI GGCC 4 cut(s) 688, 753, 1768, 1817
ApaLI GTGCAC 2 cut(s) 183, 698
ApeKI GCWGC 3 cut(s) 11, 1548, 1942
ApoI RAATTY 4 cut(s) 361, 914, 1364, 1627
Asp700I GAANNNNTTC 1 cut(s) 801
AspS9I GGNCC 1 cut(s) 562
AsuC2I CCSGG 3 cut(s) 1064, 1678, 1679
AsuHPI GGTGA 4 cut(s) 776, 1555, 1729, 1814
AvaI CYCGRG 3 cut(s) 440, 1171, 1677
AvaII GGWCC 1 cut(s) 562
BaeGI GKGCMC 2 cut(s) 187, 702
BalI TGGCCA 1 cut(s) 690
BanII GRGCYC 1 cut(s) 1974
BbrPI CACGTG 1 cut(s) 541
Bbv12I GWGCWC 3 cut(s) 187, 702, 1974
BbvCI CCTCAGC 1 cut(s) 771
BbvI GCAGC 3 cut(s) 23, 1560, 1929
BccI CCATC 7 cut(s) 148, 155, 377, 476, 754, 1050, 1283
BciT130I CCWGG 3 cut(s) 280, 1571, 1779
BclI TGATCA 1 cut(s) 535
BcnI CCSGG 3 cut(s) 1064, 1678, 1679
BcoDI GTCTC 2 cut(s) 17, 1168
BfaI CTAG 4 cut(s) 200, 294, 357, 531
BfmI CTRYAG 3 cut(s) 264, 1073, 1943
BfuAI ACCTGC 1 cut(s) 535
BglII AGATCT 2 cut(s) 867, 1556
BisI GCNGC 3 cut(s) 12, 1549, 1943
BlsI GCNGC 3 cut(s) 13, 1550, 1944
BmcAI AGTACT 1 cut(s) 1286
Bme1390I CCNGG 6 cut(s) 280, 1064, 1571, 1678, 1679, 1779
Bme18I GGWCC 1 cut(s) 562
BmeT110I CYCGRG 3 cut(s) 440, 1171, 1677
BmgT120I GGNCC 1 cut(s) 562
BmiI GGNNCC 3 cut(s) 564, 777, 1783
BmrFI CCNGG 6 cut(s) 280, 1064, 1571, 1678, 1679, 1779
BmsI GCATC 7 cut(s) 210, 556, 647, 731, 1592, 1819, 1921
BoxI GACNNNNGTC 1 cut(s) 1853
BplI GAGNNNNNCTC 2 cut(s) 20, 52
Bpu10I CCTNAGC 2 cut(s) 771, 1968
BpuEI CTTGAG 1 cut(s) 1874
BpuMI CCSGG 3 cut(s) 1064, 1678, 1679
Bsa29I ATCGAT 1 cut(s) 1896
BsaAI YACGTR 1 cut(s) 541
BsaJI CCNNGG 6 cut(s) 660, 1062, 1291, 1677, 1678, 1740
BsaWI WCCGGW 1 cut(s) 748
Bsc4I CCNNNNNNNGG 4 cut(s) 247, 603, 1677, 1832
Bse1I ACTGG 1 cut(s) 1004
BseAI TCCGGA 1 cut(s) 748
BseBI CCWGG 3 cut(s) 280, 1571, 1779
BseCI ATCGAT 1 cut(s) 1896
BseDI CCNNGG 6 cut(s) 660, 1062, 1291, 1677, 1678, 1740
BseGI GGATG 9 cut(s) 504, 593, 670, 712, 851, 1159, 1400, 1607, 1936
BseLI CCNNNNNNNGG 4 cut(s) 247, 603, 1677, 1832
BseMII CTCAG 6 cut(s) 180, 762, 887, 1278, 1634, 1959
BseNI ACTGG 1 cut(s) 1004
BseRI GAGGAG 2 cut(s) 768, 1213
BseSI GKGCMC 2 cut(s) 187, 702
BseXI GCAGC 3 cut(s) 23, 1560, 1929
BsgI GTGCAG 2 cut(s) 30, 534
BshFI GGCC 4 cut(s) 690, 755, 1770, 1819
BshVI ATCGAT 1 cut(s) 1896
BsiHKAI GWGCWC 3 cut(s) 187, 702, 1974
BsiHKCI CYCGRG 3 cut(s) 440, 1171, 1677
BsiSI CCGG 3 cut(s) 749, 1064, 1678
BslI CCNNNNNNNGG 4 cut(s) 247, 603, 1677, 1832
BsmAI GTCTC 2 cut(s) 17, 1168
BsmBI CGTCTC 1 cut(s) 17
BsnI GGCC 4 cut(s) 690, 755, 1770, 1819
BsoBI CYCGRG 3 cut(s) 440, 1171, 1677
Bsp1286I GDGCHC 3 cut(s) 187, 702, 1974
Bsp13I TCCGGA 1 cut(s) 748
Bsp143I GATC 9 cut(s) 259, 535, 606, 828, 867, 1066, 1556, 1893, 1989
BspACI CCGC 2 cut(s) 477, 1940
BspANI GGCC 4 cut(s) 690, 755, 1770, 1819
BspCNI CTCAG 6 cut(s) 179, 763, 886, 1277, 1633, 1960
BspDI ATCGAT 1 cut(s) 1896
BspEI TCCGGA 1 cut(s) 748
BspHI TCATGA 2 cut(s) 1530, 1861
BspLI GGNNCC 3 cut(s) 564, 777, 1783
BspMAI CTGCAG 1 cut(s) 1947
BspMI ACCTGC 1 cut(s) 535
BspPI GGATC 4 cut(s) 254, 614, 1074, 1997
BspQI GCTCTTC 1 cut(s) 1878
BsrI ACTGG 1 cut(s) 1004
BssECI CCNNGG 6 cut(s) 660, 1062, 1291, 1677, 1678, 1740
BssMI GATC 9 cut(s) 259, 535, 606, 828, 867, 1066, 1556, 1893, 1989
BssT1I CCWWGG 3 cut(s) 660, 1291, 1740
Bst2UI CCWGG 3 cut(s) 280, 1571, 1779
Bst4CI ACNGT 2 cut(s) 732, 1179
Bst6I CTCTTC 1 cut(s) 1878
BstBAI YACGTR 1 cut(s) 541
BstC8I GCNNGC 2 cut(s) 636, 692
BstDEI CTNAG 7 cut(s) 166, 771, 873, 1264, 1586, 1620, 1968
BstENI CCTNNNNNAGG 1 cut(s) 245
BstF5I GGATG 9 cut(s) 504, 593, 670, 712, 851, 1159, 1400, 1607, 1936
BstKTI GATC 9 cut(s) 262, 538, 609, 831, 870, 1069, 1559, 1896, 1992
BstMAI GTCTC 2 cut(s) 17, 1168
BstMBI GATC 9 cut(s) 259, 535, 606, 828, 867, 1066, 1556, 1893, 1989
BstMWI GCNNNNNNNGC 1 cut(s) 11
BstNI CCWGG 3 cut(s) 280, 1571, 1779
BstNSI RCATGY 1 cut(s) 1490
BstPAI GACNNNNGTC 1 cut(s) 1853
BstSCI CCNGG 6 cut(s) 278, 1062, 1569, 1676, 1677, 1777
BstSFI CTRYAG 3 cut(s) 264, 1073, 1943
BstSLI GKGCMC 2 cut(s) 187, 702
BstV1I GCAGC 3 cut(s) 23, 1560, 1929
BstX2I RGATCY 3 cut(s) 867, 1066, 1556
BstYI RGATCY 3 cut(s) 867, 1066, 1556
Bsu15I ATCGAT 1 cut(s) 1896
BsuRI GGCC 4 cut(s) 690, 755, 1770, 1819
BsuTUI ATCGAT 1 cut(s) 1896
BtgZI GCGATG 1 cut(s) 1695
BtsCI GGATG 9 cut(s) 504, 593, 670, 712, 851, 1159, 1400, 1607, 1936
BtsIMutI CAGTG 1 cut(s) 2002
BveI ACCTGC 1 cut(s) 535
Cac8I GCNNGC 2 cut(s) 636, 692
CciI TCATGA 2 cut(s) 1530, 1861
Cfr13I GGNCC 1 cut(s) 562
Cfr9I CCCGGG 1 cut(s) 1677
ClaI ATCGAT 1 cut(s) 1896
CseI GACGC 1 cut(s) 855
Csp6I GTAC 6 cut(s) 494, 1053, 1285, 1387, 1612, 1924
CviAII CATG 9 cut(s) 172, 338, 1198, 1423, 1458, 1487, 1531, 1862, 1927
CviQI GTAC 6 cut(s) 494, 1053, 1285, 1387, 1612, 1924
DdeI CTNAG 7 cut(s) 166, 771, 873, 1264, 1586, 1620, 1968
DpnI GATC 9 cut(s) 261, 537, 608, 830, 869, 1068, 1558, 1895, 1991
DpnII GATC 9 cut(s) 259, 535, 606, 828, 867, 1066, 1556, 1893, 1989
EaeI YGGCCR 1 cut(s) 688
Eam1104I CTCTTC 1 cut(s) 1878
EarI CTCTTC 1 cut(s) 1878
EciI GGCGGA 1 cut(s) 492
Ecl136II GAGCTC 1 cut(s) 1972
Eco130I CCWWGG 3 cut(s) 660, 1291, 1740
Eco24I GRGCYC 1 cut(s) 1974
Eco32I GATATC 2 cut(s) 459, 1470
Eco47I GGWCC 1 cut(s) 562
Eco53kI GAGCTC 1 cut(s) 1972
Eco57I CTGAAG 1 cut(s) 1014
Eco72I CACGTG 1 cut(s) 541
Eco88I CYCGRG 3 cut(s) 440, 1171, 1677
EcoICRI GAGCTC 1 cut(s) 1972
EcoNI CCTNNNNNAGG 1 cut(s) 245
EcoO109I RGGNCCY 1 cut(s) 562
EcoRII CCWGG 3 cut(s) 278, 1569, 1777
EcoRV GATATC 2 cut(s) 459, 1470
EcoT14I CCWWGG 3 cut(s) 660, 1291, 1740
EcoT22I ATGCAT 1 cut(s) 1459
EcoT38I GRGCYC 1 cut(s) 1974
ErhI CCWWGG 3 cut(s) 660, 1291, 1740
Esp3I CGTCTC 1 cut(s) 17
FaeI CATG 9 cut(s) 175, 341, 1201, 1426, 1461, 1490, 1534, 1865, 1930
FalI AAGNNNNNCTT 2 cut(s) 1302, 1334
FatI CATG 9 cut(s) 171, 337, 1197, 1422, 1457, 1486, 1530, 1861, 1926
FbaI TGATCA 1 cut(s) 535
FblI GTMKAC 2 cut(s) 72, 267
Fnu4HI GCNGC 3 cut(s) 12, 1549, 1943
FokI GGATG 9 cut(s) 491, 580, 677, 719, 838, 1146, 1407, 1614, 1943
FriOI GRGCYC 1 cut(s) 1974
Fsp4HI GCNGC 3 cut(s) 12, 1549, 1943
FspBI CTAG 4 cut(s) 200, 294, 357, 531
GluI GCNGC 3 cut(s) 12, 1549, 1943
HaeIII GGCC 4 cut(s) 690, 755, 1770, 1819
HapII CCGG 3 cut(s) 749, 1064, 1678
HgaI GACGC 1 cut(s) 855
Hin1II CATG 9 cut(s) 175, 341, 1201, 1426, 1461, 1490, 1534, 1865, 1930
HincII GTYRAC 1 cut(s) 1029
HindII GTYRAC 1 cut(s) 1029
HinfI GANTC 7 cut(s) 235, 1058, 1098, 1136, 1232, 1268, 1731
HpaII CCGG 3 cut(s) 749, 1064, 1678
HphI GGTGA 4 cut(s) 776, 1555, 1729, 1814
Hpy166II GTNNAC 7 cut(s) 73, 163, 185, 268, 700, 1029, 1400
Hpy188I TCNGA 8 cut(s) 169, 817, 1020, 1237, 1246, 1267, 1348, 1476
Hpy8I GTNNAC 7 cut(s) 73, 163, 185, 268, 700, 1029, 1400
HpyAV CCTTC 9 cut(s) 251, 389, 553, 791, 959, 1439, 1721, 1795, 1980
HpyCH4III ACNGT 2 cut(s) 732, 1179
HpyCH4IV ACGT 2 cut(s) 540, 1795
HpyF10VI GCNNNNNNNGC 1 cut(s) 11
HpyF3I CTNAG 7 cut(s) 166, 771, 873, 1264, 1586, 1620, 1968
HpySE526I ACGT 2 cut(s) 540, 1795
Hsp92II CATG 9 cut(s) 175, 341, 1201, 1426, 1461, 1490, 1534, 1865, 1930
Kpn2I TCCGGA 1 cut(s) 748
Ksp22I TGATCA 1 cut(s) 535
Kzo9I GATC 9 cut(s) 259, 535, 606, 828, 867, 1066, 1556, 1893, 1989
LguI GCTCTTC 1 cut(s) 1878
LmnI GCTCC 3 cut(s) 259, 544, 781
Lsp1109I GCAGC 3 cut(s) 23, 1560, 1929
LweI GCATC 7 cut(s) 210, 556, 647, 731, 1592, 1819, 1921
MaeI CTAG 4 cut(s) 200, 294, 357, 531
MaeII ACGT 2 cut(s) 540, 1795
MaeIII GTNAC 3 cut(s) 409, 1012, 1846
MalI GATC 9 cut(s) 261, 537, 608, 830, 869, 1068, 1558, 1895, 1991
MboI GATC 9 cut(s) 259, 535, 606, 828, 867, 1066, 1556, 1893, 1989
MfeI CAATTG 2 cut(s) 18, 1227
MflI RGATCY 3 cut(s) 867, 1066, 1556
MhlI GDGCHC 3 cut(s) 187, 702, 1974
MlsI TGGCCA 1 cut(s) 690
MluCI AATT 9 cut(s) 18, 124, 361, 611, 806, 914, 1227, 1364, 1627
MluNI TGGCCA 1 cut(s) 690
MlyI GAGTC 1 cut(s) 229
Mox20I TGGCCA 1 cut(s) 690
Mph1103I ATGCAT 1 cut(s) 1459
MroI TCCGGA 1 cut(s) 748
MroXI GAANNNNTTC 1 cut(s) 801
MscI TGGCCA 1 cut(s) 690
MseI TTAA 8 cut(s) 54, 123, 839, 858, 912, 1092, 1281, 1301
MslI CAYNNNNRTG 2 cut(s) 705, 1827
Msp20I TGGCCA 1 cut(s) 690
MspA1I CMGCKG 1 cut(s) 1942
MspI CCGG 3 cut(s) 749, 1064, 1678
MspR9I CCNGG 6 cut(s) 280, 1064, 1571, 1678, 1679, 1779
MunI CAATTG 2 cut(s) 18, 1227
MvaI CCWGG 3 cut(s) 280, 1571, 1779
MwoI GCNNNNNNNGC 1 cut(s) 11
NciI CCSGG 3 cut(s) 1064, 1678, 1679
NdeII GATC 9 cut(s) 259, 535, 606, 828, 867, 1066, 1556, 1893, 1989
NlaIII CATG 9 cut(s) 175, 341, 1201, 1426, 1461, 1490, 1534, 1865, 1930
NlaIV GGNNCC 3 cut(s) 564, 777, 1783
NmuCI GTSAC 2 cut(s) 409, 1846
NsiI ATGCAT 1 cut(s) 1459
NspI RCATGY 1 cut(s) 1490
PaeR7I CTCGAG 1 cut(s) 1171
PagI TCATGA 2 cut(s) 1530, 1861
PciI ACATGT 1 cut(s) 1486
PciSI GCTCTTC 1 cut(s) 1878
PcsI WCGNNNNNNNCGW 1 cut(s) 438
PdmI GAANNNNTTC 1 cut(s) 801
PfeI GAWTC 6 cut(s) 1058, 1098, 1136, 1232, 1268, 1731
PfoI TCCNGGA 1 cut(s) 278
PkrI GCNGC 3 cut(s) 13, 1550, 1944
PleI GAGTC 1 cut(s) 229
PmaCI CACGTG 1 cut(s) 541
PmlI CACGTG 1 cut(s) 541
PpsI GAGTC 1 cut(s) 229
Ppu21I YACGTR 1 cut(s) 541
PpuMI RGGWCCY 1 cut(s) 562
PscI ACATGT 1 cut(s) 1486
PshAI GACNNNNGTC 1 cut(s) 1853
Psp124BI GAGCTC 1 cut(s) 1974
Psp5II RGGWCCY 1 cut(s) 562
Psp6I CCWGG 3 cut(s) 278, 1569, 1777
PspCI CACGTG 1 cut(s) 541
PspGI CCWGG 3 cut(s) 278, 1569, 1777
PspN4I GGNNCC 3 cut(s) 564, 777, 1783
PspPI GGNCC 1 cut(s) 562
PspPPI RGGWCCY 1 cut(s) 562
PstI CTGCAG 1 cut(s) 1947
PsuI RGATCY 3 cut(s) 867, 1066, 1556
RsaI GTAC 6 cut(s) 495, 1054, 1286, 1388, 1613, 1925
RsaNI GTAC 6 cut(s) 494, 1053, 1285, 1387, 1612, 1924
RseI CAYNNNNRTG 2 cut(s) 705, 1827
SacI GAGCTC 1 cut(s) 1974
SapI GCTCTTC 1 cut(s) 1878
SaqAI TTAA 8 cut(s) 54, 123, 839, 858, 912, 1092, 1281, 1301
SatI GCNGC 3 cut(s) 12, 1549, 1943
Sau3AI GATC 9 cut(s) 259, 535, 606, 828, 867, 1066, 1556, 1893, 1989
Sau96I GGNCC 1 cut(s) 562
ScaI AGTACT 1 cut(s) 1286
SchI GAGTC 1 cut(s) 229
ScrFI CCNGG 6 cut(s) 280, 1064, 1571, 1678, 1679, 1779
SduI GDGCHC 3 cut(s) 187, 702, 1974
SfaNI GCATC 7 cut(s) 210, 556, 647, 731, 1592, 1819, 1921
SfcI CTRYAG 3 cut(s) 264, 1073, 1943
Sfr274I CTCGAG 1 cut(s) 1171
SinI GGWCC 1 cut(s) 562
SlaI CTCGAG 1 cut(s) 1171
SmaI CCCGGG 1 cut(s) 1679
SmiMI CAYNNNNRTG 2 cut(s) 705, 1827
SmlI CTYRAG 2 cut(s) 1171, 1889
SmoI CTYRAG 2 cut(s) 1171, 1889
Sse9I AATT 9 cut(s) 18, 124, 361, 611, 806, 914, 1227, 1364, 1627
SsiI CCGC 2 cut(s) 477, 1940
SspI AATATT 1 cut(s) 1036
SspMI CTAG 4 cut(s) 200, 294, 357, 531
SstI GAGCTC 1 cut(s) 1974
StyD4I CCNGG 6 cut(s) 278, 1062, 1569, 1676, 1677, 1777
StyI CCWWGG 3 cut(s) 660, 1291, 1740
TaaI ACNGT 2 cut(s) 732, 1179
TaiI ACGT 2 cut(s) 543, 1798
TaqI TCGA 4 cut(s) 451, 1172, 1305, 1896
TaqII GACCGA 3 cut(s) 841, 973, 1847
TasI AATT 9 cut(s) 18, 124, 361, 611, 806, 914, 1227, 1364, 1627
TatI WGTACW 3 cut(s) 1284, 1386, 1611
TfiI GAWTC 6 cut(s) 1058, 1098, 1136, 1232, 1268, 1731
Tru1I TTAA 8 cut(s) 54, 123, 839, 858, 912, 1092, 1281, 1301
Tru9I TTAA 8 cut(s) 54, 123, 839, 858, 912, 1092, 1281, 1301
TseFI GTSAC 2 cut(s) 409, 1846
TseI GCWGC 3 cut(s) 11, 1548, 1942
Tsp45I GTSAC 2 cut(s) 409, 1846
TspGWI ACGGA 4 cut(s) 41, 962, 1203, 1707
TspMI CCCGGG 1 cut(s) 1677
VneI GTGCAC 2 cut(s) 183, 698
VpaK11BI GGWCC 1 cut(s) 562
XagI CCTNNNNNAGG 1 cut(s) 245
XapI RAATTY 4 cut(s) 361, 914, 1364, 1627
XbaI TCTAGA 1 cut(s) 356
XceI RCATGY 1 cut(s) 1490
XhoI CTCGAG 1 cut(s) 1171
XmaI CCCGGG 1 cut(s) 1677
XmiI GTMKAC 2 cut(s) 72, 267
XmnI GAANNNNTTC 1 cut(s) 801
XspI CTAG 4 cut(s) 200, 294, 357, 531
ZrmI AGTACT 1 cut(s) 1286
Zsp2I ATGCAT 1 cut(s) 1459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.