AT2G03120

Signal peptide peptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0012156
Physical Location & Seq
Forward (+)
937383 .. 940551
3169 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G03120.1

Sequence Viewer

Length: 1035 bp
ATGAAGAATTGTGAGAGATTTGCTAATCTCGCTCTCGCAGGTTTGACATTGGCACCACTCGTTGTGAGAGTAAATCCAAATTTGAATGTTATTCTCACAGCATGTATCACTGTTTATGTGGGTTGCTTTCGTTCGGTCAAGGATACTCCTCCAACGGAGACGATGTCAAAAGAACATGCCATGCGTTTCCCATTGGTTGGGAGTGCTATGCTTCTCTCACTTTTCTTATTGTTCAAGTTTCTCTCAAAGGACTTGGTTAATGCTGTGCTAACAGCTTACTTCTTTGTTCTTGGGATTGTCGCTCTTTCAGCGACATTGTTACCAGCCATCAGAAGATTTTTACCAAATCCTTGGAATGACAATCTTATCGTCTGGCGTTTTCCTTATTTCAAGTCTTTGGAGGTAGAGTTCACAAAGTCCCAAGTTGTTGCGGGAATCCCTGGAACATTCTTCTGTGCGTGGTATGCGTGGAAAAAACATTGGCTGGCTAACAATATCCTCGGCCTTTCCTTCTGCATTCAGGGAATTGAGATGCTCTCTCTCGGATCATTCAAGACTGGTGCCATCCTTTTGGCAGGACTATTTTTCTATGATATCTTCTGGGTTTTCTTTACTCCAGTTATGGTTAGTGTTGCCAAATCCTTCGATGCTCCAATTAAGCTCTTATTCCCTACGGGTGATGCTCTAAGACCCTATTCTATGCTTGGTCTTGGTGACATTGTCATTCCGGGTATTTTCGTTGCACTAGCTCTAAGATTTGATGTGTCAAGACGTAGACAACCACAATACTTCACAAGTGCATTTATCGGATACGCTGTTGGTGTGATCCTCACGATTGTAGTCATGAACTGGTTTCAAGCAGCACAGCCTGCTTTGTTATACATTGTCCCAGCCGTAATTGGGTTCTTGGCTTCTCACTGCATTTGGAACGGTGACATCAAACCGTTGTTGGCGTTTGATGAATCAAAGACAGAGGAAGCAACGACTGATGAATCAAAGACTAGTGAGGAGGTTAATAAAGCTCATGATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000323 GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005791 GO:0005798 GO:0006508 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009555 GO:0009846 GO:0009856 GO:0009986 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0016787 GO:0019538 GO:0019899 GO:0022414 GO:0022607 GO:0030163 GO:0030176 GO:0030660 GO:0030970 GO:0031090 GO:0031224 GO:0031227 GO:0031410 GO:0031625 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032527 GO:0032991 GO:0033036 GO:0033554 GO:0033619 GO:0034613 GO:0034976 GO:0036503 GO:0036513 GO:0042175 GO:0042221 GO:0042500 GO:0042802 GO:0042803 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045184 GO:0046907 GO:0046983 GO:0048229 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051259 GO:0051260 GO:0051262 GO:0051289 GO:0051603 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0065003 GO:0070001 GO:0070011 GO:0070727 GO:0071458 GO:0071556 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0097708 GO:0098552 GO:0098553 GO:0098554 GO:0098562 GO:0098588 GO:0098796 GO:0098805 GO:0098827 GO:0098852 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1903513 GO:1904211
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_A22B

Protein Analysis

344

Amino Acids

38.34

Weight (kDa)

8.46

Isoelectric Point (pI)

36.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_A22B PF04258 49 - 322 1.6e-92 Signal peptide peptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012156)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G03120
fragaria_vesca FvH4_2g36110
malus_domestica MD08G1118300.v1.1 MD15G1097600.v1.1
prunus_persica Prupe.1G452500_v2.0.a1 Prupe.1G452500_v2.0.a1 Prupe.1G452500_v2.0.a1
pyrus_communis pycom15g08950
rosa_chinensis RchiOBHm_Chr6g0305761
rosa_laevigata RLG00000010860
rosa_multiflora Rmu_sc0001809.1_g000039 Rmu_sc0042960.1_g000001
rosa_roxburghii Rroxscaffold_7G00162370
rosa_rugosa Rorug06G0344000
rosa_samantha Rh6AG455400 Rh6BG445800 Rh6CG469400 Rh6DG456100
rosa_wichuraiana Rw6G039730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 29
AccB1I GGYRCC 2 cut(s) 52, 560
AccB7I CCANNNNNTGG 1 cut(s) 197
AccI GTMKAC 1 cut(s) 775
AciI CCGC 1 cut(s) 431
AclWI GGATC 2 cut(s) 553, 820
AcsI RAATTY 1 cut(s) 79
AfiI CCNNNNNNNGG 2 cut(s) 197, 900
AgsI TTSAA 5 cut(s) 85, 235, 391, 553, 857
AhlI ACTAGT 1 cut(s) 1001
AjnI CCWGG 1 cut(s) 439
AloI GAACNNNNNNTCC 2 cut(s) 392, 424
AluBI AGCT 4 cut(s) 275, 661, 749, 1022
AluI AGCT 4 cut(s) 275, 661, 749, 1022
Alw26I GTCTC 1 cut(s) 152
AlwI GGATC 2 cut(s) 553, 820
AoxI GGCC 1 cut(s) 502
ApeKI GCWGC 1 cut(s) 860
ApoI RAATTY 1 cut(s) 79
AsuC2I CCSGG 1 cut(s) 729
AsuHPI GGTGA 3 cut(s) 689, 725, 944
BanI GGYRCC 2 cut(s) 52, 560
BbvI GCAGC 1 cut(s) 872
BccI CCATC 2 cut(s) 335, 572
BceAI ACGGC 1 cut(s) 878
BciT130I CCWGG 1 cut(s) 441
BciVI GTATCC 2 cut(s) 136, 803
BcnI CCSGG 1 cut(s) 729
BcoDI GTCTC 1 cut(s) 152
BcuI ACTAGT 1 cut(s) 1001
BfaI CTAG 2 cut(s) 746, 1002
BfuAI ACCTGC 1 cut(s) 29
BfuI GTATCC 2 cut(s) 136, 803
BisI GCNGC 1 cut(s) 861
BlsI GCNGC 1 cut(s) 862
Bme1390I CCNGG 2 cut(s) 441, 729
BmiI GGNNCC 2 cut(s) 54, 562
BmrFI CCNGG 2 cut(s) 441, 729
BmsI GCATC 3 cut(s) 522, 637, 670
BplI GAGNNNNNCTC 2 cut(s) 521, 553
BpmI CTGGAG 1 cut(s) 600
BpuMI CCSGG 1 cut(s) 729
BsaJI CCNNGG 3 cut(s) 350, 439, 499
BsaXI ACNNNNNCTCC 4 cut(s) 149, 179, 392, 422
Bsc4I CCNNNNNNNGG 2 cut(s) 197, 900
Bse1I ACTGG 3 cut(s) 562, 617, 854
BseBI CCWGG 1 cut(s) 441
BseDI CCNNGG 3 cut(s) 350, 439, 499
BseGI GGATG 1 cut(s) 564
BseLI CCNNNNNNNGG 2 cut(s) 197, 900
BseNI ACTGG 3 cut(s) 562, 617, 854
BseRI GAGGAG 2 cut(s) 138, 1022
BseXI GCAGC 1 cut(s) 872
BseYI CCCAGC 1 cut(s) 889
BshFI GGCC 1 cut(s) 504
BshNI GGYRCC 2 cut(s) 52, 560
BsiSI CCGG 1 cut(s) 728
BslFI GGGAC 2 cut(s) 403, 872
BslI CCNNNNNNNGG 2 cut(s) 197, 900
BsmAI GTCTC 1 cut(s) 152
BsmBI CGTCTC 1 cut(s) 152
BsmFI GGGAC 2 cut(s) 403, 872
BsmI GAATGC 1 cut(s) 516
BsnI GGCC 1 cut(s) 504
Bsp143I GATC 2 cut(s) 545, 825
BspACI CCGC 1 cut(s) 431
BspANI GGCC 1 cut(s) 504
BspHI TCATGA 2 cut(s) 843, 1024
BspLI GGNNCC 2 cut(s) 54, 562
BspMI ACCTGC 1 cut(s) 29
BspPI GGATC 2 cut(s) 553, 820
BspT107I GGYRCC 2 cut(s) 52, 560
BsrI ACTGG 3 cut(s) 562, 617, 854
BssECI CCNNGG 3 cut(s) 350, 439, 499
BssMI GATC 2 cut(s) 545, 825
BssT1I CCWWGG 1 cut(s) 350
Bst2UI CCWGG 1 cut(s) 441
Bst4CI ACNGT 3 cut(s) 112, 932, 945
BstAPI GCANNNNNTGC 1 cut(s) 869
BstC8I GCNNGC 2 cut(s) 486, 870
BstDEI CTNAG 2 cut(s) 686, 752
BstF5I GGATG 1 cut(s) 564
BstKTI GATC 2 cut(s) 548, 828
BstMAI GTCTC 1 cut(s) 152
BstMBI GATC 2 cut(s) 545, 825
BstMWI GCNNNNNNNGC 4 cut(s) 29, 308, 464, 869
BstNI CCWGG 1 cut(s) 441
BstNSI RCATGY 2 cut(s) 105, 179
BstSCI CCNGG 2 cut(s) 439, 727
BstV1I GCAGC 1 cut(s) 872
BstXI CCANNNNNNTGG 2 cut(s) 351, 571
BsuI GTATCC 2 cut(s) 136, 803
BsuRI GGCC 1 cut(s) 504
BtsCI GGATG 1 cut(s) 564
BtsI GCAGTG 1 cut(s) 916
BtsIMutI CAGTG 2 cut(s) 108, 916
BveI ACCTGC 1 cut(s) 29
Cac8I GCNNGC 2 cut(s) 486, 870
CciI TCATGA 2 cut(s) 843, 1024
CviAII CATG 5 cut(s) 102, 176, 181, 844, 1025
DdeI CTNAG 2 cut(s) 686, 752
DpnI GATC 2 cut(s) 547, 827
DpnII GATC 2 cut(s) 545, 825
Eco130I CCWWGG 1 cut(s) 350
Eco32I GATATC 1 cut(s) 595
EcoRII CCWGG 1 cut(s) 439
EcoRV GATATC 1 cut(s) 595
EcoT14I CCWWGG 1 cut(s) 350
ErhI CCWWGG 1 cut(s) 350
Esp3I CGTCTC 1 cut(s) 152
FaeI CATG 5 cut(s) 105, 179, 184, 847, 1028
FaqI GGGAC 2 cut(s) 403, 872
FatI CATG 5 cut(s) 101, 175, 180, 843, 1024
FauI CCCGC 1 cut(s) 424
FblI GTMKAC 1 cut(s) 775
Fnu4HI GCNGC 1 cut(s) 861
FokI GGATG 1 cut(s) 551
Fsp4HI GCNGC 1 cut(s) 861
FspBI CTAG 2 cut(s) 746, 1002
GluI GCNGC 1 cut(s) 861
GsaI CCCAGC 1 cut(s) 893
GsuI CTGGAG 1 cut(s) 600
HaeIII GGCC 1 cut(s) 504
HapII CCGG 1 cut(s) 728
Hin1II CATG 5 cut(s) 105, 179, 184, 847, 1028
HinfI GANTC 3 cut(s) 435, 962, 992
HpaII CCGG 1 cut(s) 728
HphI GGTGA 3 cut(s) 689, 725, 944
Hpy166II GTNNAC 2 cut(s) 411, 776
Hpy188I TCNGA 3 cut(s) 332, 545, 809
Hpy188III TCNNGA 5 cut(s) 553, 768, 832, 844, 1025
Hpy8I GTNNAC 2 cut(s) 411, 776
HpyAV CCTTC 2 cut(s) 520, 652
HpyCH4III ACNGT 3 cut(s) 112, 932, 945
HpyCH4IV ACGT 1 cut(s) 772
HpyCH4V TGCA 4 cut(s) 516, 743, 800, 921
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 308, 464, 869
HpyF3I CTNAG 2 cut(s) 686, 752
HpySE526I ACGT 1 cut(s) 772
Hsp92II CATG 5 cut(s) 105, 179, 184, 847, 1028
Kzo9I GATC 2 cut(s) 545, 825
LmnI GCTCC 1 cut(s) 655
Lsp1109I GCAGC 1 cut(s) 872
LweI GCATC 3 cut(s) 522, 637, 670
MaeI CTAG 2 cut(s) 746, 1002
MaeII ACGT 1 cut(s) 772
MaeIII GTNAC 3 cut(s) 318, 713, 932
MalI GATC 2 cut(s) 547, 827
MboI GATC 2 cut(s) 545, 825
MboII GAAGA 4 cut(s) 16, 345, 442, 589
MluCI AATT 5 cut(s) 7, 79, 525, 654, 897
MmeI TCCRAC 1 cut(s) 176
MnlI CCTC 7 cut(s) 159, 394, 509, 839, 967, 1000, 1003
MseI TTAA 3 cut(s) 258, 657, 1014
MspI CCGG 1 cut(s) 728
MspR9I CCNGG 2 cut(s) 441, 729
Mva1269I GAATGC 1 cut(s) 516
MvaI CCWGG 1 cut(s) 441
MwoI GCNNNNNNNGC 4 cut(s) 29, 308, 464, 869
NciI CCSGG 1 cut(s) 729
NdeII GATC 2 cut(s) 545, 825
NlaIII CATG 5 cut(s) 105, 179, 184, 847, 1028
NlaIV GGNNCC 2 cut(s) 54, 562
NmeAIII GCCGAG 1 cut(s) 480
NmuCI GTSAC 2 cut(s) 713, 932
NspI RCATGY 2 cut(s) 105, 179
PagI TCATGA 2 cut(s) 843, 1024
PctI GAATGC 1 cut(s) 516
PfeI GAWTC 3 cut(s) 435, 962, 992
PflFI GACNNNGTC 2 cut(s) 163, 719
PflMI CCANNNNNTGG 1 cut(s) 197
PkrI GCNGC 1 cut(s) 862
Psp6I CCWGG 1 cut(s) 439
PspFI CCCAGC 1 cut(s) 889
PspGI CCWGG 1 cut(s) 439
PspN4I GGNNCC 2 cut(s) 54, 562
PsyI GACNNNGTC 2 cut(s) 163, 719
SaqAI TTAA 3 cut(s) 258, 657, 1014
SatI GCNGC 1 cut(s) 861
Sau3AI GATC 2 cut(s) 545, 825
ScrFI CCNGG 2 cut(s) 441, 729
SetI ASST 8 cut(s) 43, 277, 405, 663, 751, 775, 1014, 1024
SfaNI GCATC 3 cut(s) 522, 637, 670
SpeI ACTAGT 1 cut(s) 1001
Sse9I AATT 5 cut(s) 7, 79, 525, 654, 897
SsiI CCGC 1 cut(s) 431
SspMI CTAG 2 cut(s) 746, 1002
StyD4I CCNGG 2 cut(s) 439, 727
StyI CCWWGG 1 cut(s) 350
TaaI ACNGT 3 cut(s) 112, 932, 945
TaiI ACGT 1 cut(s) 775
TaqI TCGA 1 cut(s) 645
TaqII GACCGA 1 cut(s) 124
TasI AATT 5 cut(s) 7, 79, 525, 654, 897
TfiI GAWTC 3 cut(s) 435, 962, 992
Tru1I TTAA 3 cut(s) 258, 657, 1014
Tru9I TTAA 3 cut(s) 258, 657, 1014
TscAI CASTG 2 cut(s) 115, 923
TseFI GTSAC 2 cut(s) 713, 932
TseI GCWGC 1 cut(s) 860
Tsp45I GTSAC 2 cut(s) 713, 932
TspDTI ATGAA 4 cut(s) 17, 860, 975, 1005
TspGWI ACGGA 1 cut(s) 170
TspRI CASTG 2 cut(s) 115, 923
Tth111I GACNNNGTC 2 cut(s) 163, 719
Van91I CCANNNNNTGG 1 cut(s) 197
XapI RAATTY 1 cut(s) 79
XceI RCATGY 2 cut(s) 105, 179
XmiI GTMKAC 1 cut(s) 775
XspI CTAG 2 cut(s) 746, 1002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.