Rmu_sc0042960.1_g000001

Signal peptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0042960.1
OG0012156
Physical Location & Seq
Reverse (-)
4181 .. 10079
5899 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0042960.1_g000001.1.cds

Sequence Viewer

Length: 1779 bp
atgagtctggtgaacatagatatcaagttcacaaagcaattgccaatagatcctttgttctcaaaaccaccattacaaaggtttccaatgccaaactctagttttcacaaaaatcctaaaatttccaagttggattcagatgcgtgtcttttggttcttcacctgttgcagtcgtttactactgaatatcacgtgacaacgcgtgcgctacagttcaatctgatgcagtccgttcccgtggaagaggaggaggcgctgtccgcttgtcagctcttgaattaccgtaaaaccctagctctctgcaaattcatcaaatcaaaatcccaatctctctctctctctctccgaatctctccgatccgtacggaacgaaacccggttgaaatttcaattgcatcgcggcccactggttcggggtttcgtcgcggaggggaacacattcagcgggattcaaatttcgatctgaatctttcgttctttccgagtggtatagtggaaacgatgaagaacgttgagcgttttgccaatatcgccttagcaggtttaacgttagcaccgcttgttgtgagggtagatccaaacctaaatgtaattctcactgcatgtctcacagtttttgtgggctgctaccggtctgtgaagccaactccacccacagagacaatgtctaatgaacatgctatgcgtttcccatttgttgggagtgcaatgctgttatcactatttttactctttaagttcttatccaaagacttggttaatgctgtcttgacgtgctatttctttgttcttgggatcatcgctctctcggcaacgttgttacctgctattgcacgttatttgccagagcgttggaataaggaccttatcatctggcatcttccatatttccgttctgttgagattgagttcacaaggtctcagatcttcgctgcaatccctgggttctttttctgtgcttggtacgcttcaaagaagcattggctagctaacaacatattggggcttgccttctgtattcagggaatagaaatgctttctcttgggtctttcaagacaggagccattcttttggctggactttttgtgtatgatatattctgggttttcttcactccagttatggtcagtgttgcaaaatcttttgatgctcctattaagctgttgttccctacagcagatattcaacgtccattttcgatgcttggacttggtgatattgtaatccctggtatttttgtggcactggctttgagatttgatgtctctagaggaaaaaagggccagtatttcaagagtgcatttttgggatacacagtgggtttggtccttacaattgttgtaatgaactggtttcaggcagcacagcctgcactgttgtatattgtaccagctgttattggatttttggctacccattgcatctggaatggtgatgtcaaaccgttattggcattcgatgagtcaaagaccaccacaaaatctgaagcggataatgctgacatacctaacaagaaggtggagtcttcgaggtgtggtgcaagtttcttattaaaatgctttgaagatgttgaattatcatcaggaggccaagacaatggcaactcaaaagtgaaccgagttggtgagccgagtacatcattttgtctggacaaagaatctagatcagttgttgcggctaatgagcctagtttaggtggtttgtgtgcaaaattggtatacttgttaacgacacaatccgttgccatcgctggccaccgccgtcagcgtcaccattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000323 GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005791 GO:0005798 GO:0006508 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009555 GO:0009846 GO:0009856 GO:0009986 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0016787 GO:0019538 GO:0019899 GO:0022414 GO:0022607 GO:0030163 GO:0030176 GO:0030660 GO:0030970 GO:0031090 GO:0031224 GO:0031227 GO:0031410 GO:0031625 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032527 GO:0032991 GO:0033036 GO:0033554 GO:0033619 GO:0034613 GO:0034976 GO:0036503 GO:0036513 GO:0042175 GO:0042221 GO:0042500 GO:0042802 GO:0042803 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045184 GO:0046907 GO:0046983 GO:0048229 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051259 GO:0051260 GO:0051262 GO:0051289 GO:0051603 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0065003 GO:0070001 GO:0070011 GO:0070727 GO:0071458 GO:0071556 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0097708 GO:0098552 GO:0098553 GO:0098554 GO:0098562 GO:0098588 GO:0098796 GO:0098805 GO:0098827 GO:0098852 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1903513 GO:1904211
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_A22B

Protein Analysis

592

Amino Acids

65.77

Weight (kDa)

9.15

Isoelectric Point (pI)

46.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012156)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G03120
fragaria_vesca FvH4_2g36110
malus_domestica MD08G1118300.v1.1 MD15G1097600.v1.1
prunus_persica Prupe.1G452500_v2.0.a1 Prupe.1G452500_v2.0.a1 Prupe.1G452500_v2.0.a1
pyrus_communis pycom15g08950
rosa_chinensis RchiOBHm_Chr6g0305761
rosa_laevigata RLG00000010860
rosa_multiflora Rmu_sc0001809.1_g000039 Rmu_sc0042960.1_g000001
rosa_roxburghii Rroxscaffold_7G00162370
rosa_rugosa Rorug06G0344000
rosa_samantha Rh6AG455400 Rh6BG445800 Rh6CG469400 Rh6DG456100
rosa_wichuraiana Rw6G039730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 530, 832
AccB7I CCANNNNNTGG 1 cut(s) 698
AccI GTMKAC 1 cut(s) 1719
AccII CGCG 3 cut(s) 202, 400, 426
AciI CCGC 8 cut(s) 261, 400, 426, 445, 557, 1490, 1676, 1759
AclI AACGTT 3 cut(s) 510, 548, 815
AclWI GGATC 4 cut(s) 44, 352, 569, 803
AcoI YGGCCR 1 cut(s) 1753
AcsI RAATTY 4 cut(s) 120, 305, 384, 454
AcuI CTGAAG 1 cut(s) 1506
AcvI CACGTG 1 cut(s) 193
AfaI GTAC 4 cut(s) 364, 965, 1389, 1636
AfiI CCNNNNNNNGG 2 cut(s) 698, 1694
AflIII ACRYGT 1 cut(s) 200
AgeI ACCGGT 1 cut(s) 630
AjiI CACGTC 1 cut(s) 774
AjnI CCWGG 2 cut(s) 940, 1228
AluBI AGCT 5 cut(s) 271, 296, 989, 1162, 1394
AluI AGCT 5 cut(s) 271, 296, 989, 1162, 1394
Alw26I GTCTC 4 cut(s) 611, 653, 924, 1270
AlwI GGATC 4 cut(s) 44, 352, 569, 803
AoxI GGCC 4 cut(s) 401, 1282, 1588, 1753
ApeKI GCWGC 3 cut(s) 624, 932, 1361
ApoI RAATTY 4 cut(s) 120, 305, 384, 454
AsiGI ACCGGT 1 cut(s) 630
Asp700I GAANNNNTTC 1 cut(s) 438
AspLEI GCGC 2 cut(s) 208, 256
AspS9I GGNCC 4 cut(s) 402, 862, 1282, 1327
AsuC2I CCSGG 1 cut(s) 377
AsuHPI GGTGA 6 cut(s) 22, 152, 1226, 1445, 1637, 1763
AsuNHI GCTAGC 1 cut(s) 985
AvaII GGWCC 2 cut(s) 862, 1327
BalI TGGCCA 1 cut(s) 1755
BbrPI CACGTG 1 cut(s) 193
BbsI GAAGAC 1 cut(s) 1518
BbvI GCAGC 3 cut(s) 611, 919, 1373
BccI CCATC 1 cut(s) 1754
BceAI ACGGC 1 cut(s) 1746
BciT130I CCWGG 2 cut(s) 942, 1230
BciVI GTATCC 1 cut(s) 1304
BcnI CCSGG 1 cut(s) 377
BcoDI GTCTC 4 cut(s) 611, 653, 924, 1270
BfaI CTAG 6 cut(s) 99, 293, 986, 1269, 1662, 1689
BfmI CTRYAG 2 cut(s) 209, 1173
BfoI RGCGCY 1 cut(s) 257
BfuAI ACCTGC 2 cut(s) 530, 832
BfuI GTATCC 1 cut(s) 1304
BglII AGATCT 1 cut(s) 924
BisI GCNGC 5 cut(s) 401, 625, 933, 1362, 1677
BlsI GCNGC 5 cut(s) 402, 626, 934, 1363, 1678
Bme1390I CCNGG 3 cut(s) 377, 942, 1230
Bme18I GGWCC 2 cut(s) 862, 1327
BmgBI CACGTC 1 cut(s) 774
BmgT120I GGNCC 4 cut(s) 402, 862, 1282, 1327
BmiI GGNNCC 1 cut(s) 1063
BmrFI CCNGG 3 cut(s) 377, 942, 1230
BmsI GCATC 7 cut(s) 130, 213, 404, 886, 1138, 1191, 1431
BmtI GCTAGC 1 cut(s) 989
BpiI GAAGAC 1 cut(s) 1518
BpmI CTGGAG 1 cut(s) 1101
Bpu10I CCTNAGC 1 cut(s) 535
BpuMI CCSGG 1 cut(s) 377
BsaAI YACGTR 1 cut(s) 193
BsaBI GATNNNNATC 1 cut(s) 465
BsaI GGTCTC 1 cut(s) 924
BsaJI CCNNGG 4 cut(s) 237, 940, 941, 1228
BsaWI WCCGGW 1 cut(s) 630
BsaXI ACNNNNNCTCC 2 cut(s) 242, 272
Bsc4I CCNNNNNNNGG 2 cut(s) 698, 1694
Bse118I RCCGGY 1 cut(s) 630
Bse1I ACTGG 5 cut(s) 412, 1118, 1251, 1285, 1355
Bse3DI GCAATG 2 cut(s) 714, 1417
Bse8I GATNNNNATC 1 cut(s) 465
BseBI CCWGG 2 cut(s) 942, 1230
BseDI CCNNGG 4 cut(s) 237, 940, 941, 1228
BseJI GATNNNNATC 1 cut(s) 465
BseLI CCNNNNNNNGG 2 cut(s) 698, 1694
BseMI GCAATG 2 cut(s) 714, 1417
BseMII CTCAG 1 cut(s) 935
BseNI ACTGG 5 cut(s) 412, 1118, 1251, 1285, 1355
BseRI GAGGAG 2 cut(s) 260, 263
BseXI GCAGC 3 cut(s) 611, 919, 1373
BsgI GTGCAG 1 cut(s) 1356
Bsh1236I CGCG 3 cut(s) 202, 400, 426
BshFI GGCC 4 cut(s) 403, 1284, 1590, 1755
BshTI ACCGGT 1 cut(s) 630
BsiSI CCGG 2 cut(s) 377, 631
BsiWI CGTACG 1 cut(s) 362
BslI CCNNNNNNNGG 2 cut(s) 698, 1694
BsmAI GTCTC 4 cut(s) 611, 653, 924, 1270
BsmI GAATGC 1 cut(s) 1454
BsnI GGCC 4 cut(s) 403, 1284, 1590, 1755
Bso31I GGTCTC 1 cut(s) 924
Bsp143I GATC 7 cut(s) 49, 357, 460, 574, 795, 924, 1664
BspACI CCGC 8 cut(s) 261, 400, 426, 445, 557, 1490, 1676, 1759
BspANI GGCC 4 cut(s) 403, 1284, 1590, 1755
BspCNI CTCAG 1 cut(s) 934
BspFNI CGCG 3 cut(s) 202, 400, 426
BspLI GGNNCC 1 cut(s) 1063
BspMI ACCTGC 2 cut(s) 530, 832
BspOI GCTAGC 1 cut(s) 989
BspPI GGATC 4 cut(s) 44, 352, 569, 803
BspTNI GGTCTC 1 cut(s) 924
BsrDI GCAATG 2 cut(s) 714, 1417
BsrFI RCCGGY 1 cut(s) 630
BsrI ACTGG 5 cut(s) 412, 1118, 1251, 1285, 1355
BssAI RCCGGY 1 cut(s) 630
BssECI CCNNGG 4 cut(s) 237, 940, 941, 1228
BssMI GATC 7 cut(s) 49, 357, 460, 574, 795, 924, 1664
BssNAI GTATAC 1 cut(s) 1720
Bst1107I GTATAC 1 cut(s) 1720
Bst2UI CCWGG 2 cut(s) 942, 1230
Bst4CI ACNGT 6 cut(s) 213, 284, 613, 1318, 1377, 1446
Bst6I CTCTTC 1 cut(s) 237
BstAPI GCANNNNNTGC 1 cut(s) 1370
BstBAI YACGTR 1 cut(s) 193
BstC8I GCNNGC 5 cut(s) 204, 987, 1008, 1371, 1753
BstDEI CTNAG 2 cut(s) 535, 921
BstDSI CCRYGG 1 cut(s) 237
BstENI CCTNNNNNAGG 1 cut(s) 1692
BstFNI CGCG 3 cut(s) 202, 400, 426
BstH2I RGCGCY 1 cut(s) 257
BstHHI GCGC 2 cut(s) 208, 256
BstKTI GATC 7 cut(s) 52, 360, 463, 577, 798, 927, 1667
BstMAI GTCTC 4 cut(s) 611, 653, 924, 1270
BstMBI GATC 7 cut(s) 49, 357, 460, 574, 795, 924, 1664
BstMWI GCNNNNNNNGC 6 cut(s) 260, 530, 809, 965, 1370, 1496
BstNI CCWGG 2 cut(s) 942, 1230
BstNSI RCATGY 2 cut(s) 606, 680
BstSCI CCNGG 3 cut(s) 375, 940, 1228
BstSFI CTRYAG 2 cut(s) 209, 1173
BstUI CGCG 3 cut(s) 202, 400, 426
BstV1I GCAGC 3 cut(s) 611, 919, 1373
BstV2I GAAGAC 1 cut(s) 1518
BstX2I RGATCY 3 cut(s) 49, 574, 924
BstXI CCANNNNNNTGG 4 cut(s) 754, 852, 1072, 1598
BstYI RGATCY 3 cut(s) 49, 574, 924
BstZ17I GTATAC 1 cut(s) 1720
BsuI GTATCC 1 cut(s) 1304
BsuRI GGCC 4 cut(s) 403, 1284, 1590, 1755
BtgI CCRYGG 1 cut(s) 237
BtgZI GCGATG 3 cut(s) 381, 784, 1732
BtrI CACGTC 1 cut(s) 774
BtsI GCAGTG 1 cut(s) 597
BtsIMutI CAGTG 6 cut(s) 405, 597, 1135, 1244, 1323, 1373
BveI ACCTGC 2 cut(s) 530, 832
Cac8I GCNNGC 5 cut(s) 204, 987, 1008, 1371, 1753
CfoI GCGC 2 cut(s) 208, 256
Cfr10I RCCGGY 1 cut(s) 630
Cfr13I GGNCC 4 cut(s) 402, 862, 1282, 1327
CseI GACGC 1 cut(s) 1757
Csp6I GTAC 4 cut(s) 363, 964, 1388, 1635
CspAI ACCGGT 1 cut(s) 630
CviAII CATG 2 cut(s) 603, 677
CviQI GTAC 4 cut(s) 363, 964, 1388, 1635
DdeI CTNAG 2 cut(s) 535, 921
DpnI GATC 7 cut(s) 51, 359, 462, 576, 797, 926, 1666
DpnII GATC 7 cut(s) 49, 357, 460, 574, 795, 924, 1664
EaeI YGGCCR 1 cut(s) 1753
Eam1104I CTCTTC 1 cut(s) 237
EarI CTCTTC 1 cut(s) 237
Eco31I GGTCTC 1 cut(s) 924
Eco32I GATATC 1 cut(s) 22
Eco47I GGWCC 2 cut(s) 862, 1327
Eco57I CTGAAG 1 cut(s) 1506
Eco72I CACGTG 1 cut(s) 193
EcoNI CCTNNNNNAGG 1 cut(s) 1692
EcoO109I RGGNCCY 1 cut(s) 862
EcoRII CCWGG 2 cut(s) 940, 1228
EcoRV GATATC 1 cut(s) 22
FaeI CATG 2 cut(s) 606, 680
FatI CATG 2 cut(s) 602, 676
FauI CCCGC 1 cut(s) 438
FblI GTMKAC 1 cut(s) 1719
Fnu4HI GCNGC 5 cut(s) 401, 625, 933, 1362, 1677
Fsp4HI GCNGC 5 cut(s) 401, 625, 933, 1362, 1677
FspBI CTAG 6 cut(s) 99, 293, 986, 1269, 1662, 1689
GlaI GCGC 2 cut(s) 207, 255
GluI GCNGC 5 cut(s) 401, 625, 933, 1362, 1677
GsuI CTGGAG 1 cut(s) 1101
HaeII RGCGCY 1 cut(s) 257
HaeIII GGCC 4 cut(s) 403, 1284, 1590, 1755
HapII CCGG 2 cut(s) 377, 631
HgaI GACGC 1 cut(s) 1757
HhaI GCGC 2 cut(s) 208, 256
Hin1II CATG 2 cut(s) 606, 680
Hin6I GCGC 2 cut(s) 206, 254
HinP1I GCGC 2 cut(s) 206, 254
HincII GTYRAC 1 cut(s) 1728
HindII GTYRAC 1 cut(s) 1728
HinfI GANTC 8 cut(s) 4, 134, 348, 449, 466, 1463, 1523, 1658
HpaI GTTAAC 1 cut(s) 1728
HpaII CCGG 2 cut(s) 377, 631
HphI GGTGA 6 cut(s) 22, 152, 1226, 1445, 1637, 1763
Hpy166II GTNNAC 7 cut(s) 13, 30, 177, 912, 1615, 1720, 1728
Hpy188I TCNGA 8 cut(s) 139, 222, 347, 357, 465, 483, 924, 1486
Hpy188III TCNNGA 9 cut(s) 274, 769, 1054, 1269, 1294, 1426, 1584, 1649, 1662
Hpy8I GTNNAC 7 cut(s) 13, 30, 177, 912, 1615, 1720, 1728
Hpy99I CGWCG 1 cut(s) 426
HpyAV CCTTC 2 cut(s) 1021, 1510
HpyCH4III ACNGT 6 cut(s) 213, 284, 613, 1318, 1377, 1446
HpyCH4IV ACGT 7 cut(s) 192, 510, 548, 773, 815, 835, 1189
HpyF10VI GCNNNNNNNGC 6 cut(s) 260, 530, 809, 965, 1370, 1496
HpyF3I CTNAG 2 cut(s) 535, 921
HpySE526I ACGT 7 cut(s) 192, 510, 548, 773, 815, 835, 1189
Hsp92II CATG 2 cut(s) 606, 680
HspAI GCGC 2 cut(s) 206, 254
KspAI GTTAAC 1 cut(s) 1728
Kzo9I GATC 7 cut(s) 49, 357, 460, 574, 795, 924, 1664
LmnI GCTCC 2 cut(s) 1061, 1156
Lsp1109I GCAGC 3 cut(s) 611, 919, 1373
LweI GCATC 7 cut(s) 130, 213, 404, 886, 1138, 1191, 1431
MaeI CTAG 6 cut(s) 99, 293, 986, 1269, 1662, 1689
MaeII ACGT 7 cut(s) 192, 510, 548, 773, 815, 835, 1189
MaeIII GTNAC 3 cut(s) 193, 819, 1769
MalI GATC 7 cut(s) 51, 359, 462, 576, 797, 926, 1666
MboI GATC 7 cut(s) 49, 357, 460, 574, 795, 924, 1664
MboII GAAGA 8 cut(s) 149, 254, 517, 872, 919, 1102, 1518, 1577
MfeI CAATTG 3 cut(s) 38, 390, 1335
MflI RGATCY 3 cut(s) 49, 574, 924
MlsI TGGCCA 1 cut(s) 1755
MluI ACGCGT 1 cut(s) 200
MluNI TGGCCA 1 cut(s) 1755
MlyI GAGTC 3 cut(s) 13, 1472, 1532
MmeI TCCRAC 2 cut(s) 111, 833
MnlI CCTC 8 cut(s) 238, 241, 244, 422, 561, 1265, 1524, 1580
Mox20I TGGCCA 1 cut(s) 1755
MroXI GAANNNNTTC 1 cut(s) 438
MscI TGGCCA 1 cut(s) 1755
MseI TTAA 6 cut(s) 545, 735, 759, 1158, 1553, 1727
Msp20I TGGCCA 1 cut(s) 1755
MspA1I CMGCKG 2 cut(s) 445, 1394
MspI CCGG 2 cut(s) 377, 631
MspR9I CCNGG 3 cut(s) 377, 942, 1230
MunI CAATTG 3 cut(s) 38, 390, 1335
Mva1269I GAATGC 1 cut(s) 1454
MvaI CCWGG 2 cut(s) 942, 1230
MvnI CGCG 3 cut(s) 202, 400, 426
MwoI GCNNNNNNNGC 6 cut(s) 260, 530, 809, 965, 1370, 1496
NciI CCSGG 1 cut(s) 377
NdeII GATC 7 cut(s) 49, 357, 460, 574, 795, 924, 1664
NheI GCTAGC 1 cut(s) 985
NlaIII CATG 2 cut(s) 606, 680
NlaIV GGNNCC 1 cut(s) 1063
NmeAIII GCCGAG 2 cut(s) 788, 1656
NmuCI GTSAC 2 cut(s) 193, 1769
NspI RCATGY 2 cut(s) 606, 680
PasI CCCWGGG 1 cut(s) 941
PcsI WCGNNNNNNNCGW 1 cut(s) 479
PctI GAATGC 1 cut(s) 1454
PdmI GAANNNNTTC 1 cut(s) 438
PfeI GAWTC 5 cut(s) 134, 348, 449, 466, 1658
Pfl23II CGTACG 1 cut(s) 362
PflFI GACNNNGTC 1 cut(s) 664
PflMI CCANNNNNTGG 1 cut(s) 698
PinAI ACCGGT 1 cut(s) 630
PkrI GCNGC 5 cut(s) 402, 626, 934, 1363, 1678
PleI GAGTC 3 cut(s) 12, 1471, 1531
PmaCI CACGTG 1 cut(s) 193
PmlI CACGTG 1 cut(s) 193
PpsI GAGTC 3 cut(s) 12, 1471, 1531
Ppu21I YACGTR 1 cut(s) 193
PpuMI RGGWCCY 1 cut(s) 862
Psp1406I AACGTT 3 cut(s) 510, 548, 815
Psp5II RGGWCCY 1 cut(s) 862
Psp6I CCWGG 2 cut(s) 940, 1228
PspCI CACGTG 1 cut(s) 193
PspGI CCWGG 2 cut(s) 940, 1228
PspLI CGTACG 1 cut(s) 362
PspN4I GGNNCC 1 cut(s) 1063
PspPI GGNCC 4 cut(s) 402, 862, 1282, 1327
PspPPI RGGWCCY 1 cut(s) 862
PsuI RGATCY 3 cut(s) 49, 574, 924
PsyI GACNNNGTC 1 cut(s) 664
PvuII CAGCTG 1 cut(s) 1394
RsaI GTAC 4 cut(s) 364, 965, 1389, 1636
RsaNI GTAC 4 cut(s) 363, 964, 1388, 1635
SaqAI TTAA 6 cut(s) 545, 735, 759, 1158, 1553, 1727
SatI GCNGC 5 cut(s) 401, 625, 933, 1362, 1677
Sau3AI GATC 7 cut(s) 49, 357, 460, 574, 795, 924, 1664
Sau96I GGNCC 4 cut(s) 402, 862, 1282, 1327
SchI GAGTC 3 cut(s) 13, 1472, 1532
ScrFI CCNGG 3 cut(s) 377, 942, 1230
SfaNI GCATC 7 cut(s) 130, 213, 404, 886, 1138, 1191, 1431
SfcI CTRYAG 2 cut(s) 209, 1173
SinI GGWCC 2 cut(s) 862, 1327
SsiI CCGC 8 cut(s) 261, 400, 426, 445, 557, 1490, 1676, 1759
SspMI CTAG 6 cut(s) 99, 293, 986, 1269, 1662, 1689
StyD4I CCNGG 3 cut(s) 375, 940, 1228
TaaI ACNGT 6 cut(s) 213, 284, 613, 1318, 1377, 1446
TaiI ACGT 7 cut(s) 195, 513, 551, 776, 818, 838, 1192
TaqI TCGA 4 cut(s) 459, 1199, 1458, 1529
TatI WGTACW 1 cut(s) 1634
TauI GCSGC 2 cut(s) 403, 1679
TfiI GAWTC 5 cut(s) 134, 348, 449, 466, 1658
Tru1I TTAA 6 cut(s) 545, 735, 759, 1158, 1553, 1727
Tru9I TTAA 6 cut(s) 545, 735, 759, 1158, 1553, 1727
TscAI CASTG 6 cut(s) 412, 604, 1135, 1251, 1323, 1380
TseFI GTSAC 2 cut(s) 193, 1769
TseI GCWGC 3 cut(s) 624, 932, 1361
Tsp45I GTSAC 2 cut(s) 193, 1769
TspDTI ATGAA 4 cut(s) 298, 518, 687, 1361
TspGWI ACGGA 5 cut(s) 220, 350, 380, 881, 1729
TspRI CASTG 6 cut(s) 412, 604, 1135, 1251, 1323, 1380
Tth111I GACNNNGTC 1 cut(s) 664
Van91I CCANNNNNTGG 1 cut(s) 698
VpaK11BI GGWCC 2 cut(s) 862, 1327
XagI CCTNNNNNAGG 1 cut(s) 1692
XapI RAATTY 4 cut(s) 120, 305, 384, 454
XbaI TCTAGA 2 cut(s) 1268, 1661
XceI RCATGY 2 cut(s) 606, 680
XmiI GTMKAC 1 cut(s) 1719
XmnI GAANNNNTTC 1 cut(s) 438
XspI CTAG 6 cut(s) 99, 293, 986, 1269, 1662, 1689
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.