Signal peptide
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G03120 |
| fragaria_vesca | FvH4_2g36110 |
| malus_domestica | MD08G1118300.v1.1 MD15G1097600.v1.1 |
| prunus_persica | Prupe.1G452500_v2.0.a1 Prupe.1G452500_v2.0.a1 Prupe.1G452500_v2.0.a1 |
| pyrus_communis | pycom15g08950 |
| rosa_chinensis | RchiOBHm_Chr6g0305761 |
| rosa_laevigata | RLG00000010860 |
| rosa_multiflora | Rmu_sc0001809.1_g000039 Rmu_sc0042960.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00162370 |
| rosa_rugosa | Rorug06G0344000 |
| rosa_samantha | Rh6AG455400 Rh6BG445800 Rh6CG469400 Rh6DG456100 |
| rosa_wichuraiana | Rw6G039730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 29, 331 |
| AccB1I | GGYRCC | 1 cut(s) | 560 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 372 |
| AccII | CGCG | 1 cut(s) | 974 |
| AciI | CCGC | 4 cut(s) | 754, 944, 972, 974 |
| AclI | AACGTT | 2 cut(s) | 9, 47 |
| AclWI | GGATC | 4 cut(s) | 68, 302, 356, 369 |
| AcuI | CTGAAG | 2 cut(s) | 138, 1005 |
| AfaI | GTAC | 2 cut(s) | 788, 888 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 197, 372, 397 |
| AgeI | ACCGGT | 1 cut(s) | 129 |
| AgsI | TTSAA | 2 cut(s) | 471, 530 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 102 |
| AjiI | CACGTC | 2 cut(s) | 273, 689 |
| AjnI | CCWGG | 2 cut(s) | 439, 727 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 136, 168 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 392, 424 |
| AluBI | AGCT | 1 cut(s) | 661 |
| AluI | AGCT | 1 cut(s) | 661 |
| Alw26I | GTCTC | 2 cut(s) | 110, 152 |
| AlwI | GGATC | 4 cut(s) | 68, 302, 356, 369 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 683 |
| AoxI | GGCC | 1 cut(s) | 781 |
| ApeKI | GCWGC | 4 cut(s) | 431, 683, 860, 911 |
| AsiGI | ACCGGT | 1 cut(s) | 129 |
| AspLEI | GCGC | 1 cut(s) | 652 |
| AspS9I | GGNCC | 3 cut(s) | 132, 781, 826 |
| AsuHPI | GGTGA | 2 cut(s) | 725, 944 |
| AvaII | GGWCC | 2 cut(s) | 132, 826 |
| BamHI | GGATCC | 1 cut(s) | 361 |
| BanI | GGYRCC | 1 cut(s) | 560 |
| BbsI | GAAGAC | 1 cut(s) | 974 |
| BbvI | GCAGC | 4 cut(s) | 418, 670, 872, 898 |
| BccI | CCATC | 3 cut(s) | 374, 572, 898 |
| BciT130I | CCWGG | 2 cut(s) | 441, 729 |
| BciVI | GTATCC | 1 cut(s) | 803 |
| BcoDI | GTCTC | 2 cut(s) | 110, 152 |
| BfaI | CTAG | 1 cut(s) | 768 |
| BfuAI | ACCTGC | 2 cut(s) | 29, 331 |
| BfuI | GTATCC | 1 cut(s) | 803 |
| BisI | GCNGC | 5 cut(s) | 432, 684, 861, 912, 975 |
| BlsI | GCNGC | 5 cut(s) | 433, 685, 862, 913, 976 |
| BmcAI | AGTACT | 1 cut(s) | 788 |
| Bme1390I | CCNGG | 2 cut(s) | 441, 729 |
| Bme18I | GGWCC | 2 cut(s) | 132, 826 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 102 |
| BmgBI | CACGTC | 2 cut(s) | 273, 689 |
| BmgT120I | GGNCC | 3 cut(s) | 132, 781, 826 |
| BmiI | GGNNCC | 3 cut(s) | 363, 445, 562 |
| BmrFI | CCNGG | 2 cut(s) | 441, 729 |
| BmsI | GCATC | 3 cut(s) | 637, 670, 988 |
| BpiI | GAAGAC | 1 cut(s) | 974 |
| BpmI | CTGGAG | 1 cut(s) | 600 |
| Bpu10I | CCTNAGC | 1 cut(s) | 34 |
| BsaJI | CCNNGG | 1 cut(s) | 972 |
| BsaWI | WCCGGW | 2 cut(s) | 129, 390 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 392, 422 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 197, 372, 397 |
| Bse118I | RCCGGY | 1 cut(s) | 129 |
| Bse1I | ACTGG | 4 cut(s) | 562, 617, 784, 854 |
| Bse3DI | GCAATG | 2 cut(s) | 213, 297 |
| BseBI | CCWGG | 2 cut(s) | 441, 729 |
| BseDI | CCNNGG | 1 cut(s) | 972 |
| BseGI | GGATG | 1 cut(s) | 564 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 197, 372, 397 |
| BseMI | GCAATG | 2 cut(s) | 213, 297 |
| BseMII | CTCAG | 2 cut(s) | 321, 434 |
| BseNI | ACTGG | 4 cut(s) | 562, 617, 784, 854 |
| BseXI | GCAGC | 4 cut(s) | 418, 670, 872, 898 |
| BsgI | GTGCAG | 1 cut(s) | 669 |
| Bsh1236I | CGCG | 1 cut(s) | 974 |
| BshFI | GGCC | 1 cut(s) | 783 |
| BshNI | GGYRCC | 1 cut(s) | 560 |
| BshTI | ACCGGT | 1 cut(s) | 129 |
| BsiSI | CCGG | 2 cut(s) | 130, 391 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 197, 372, 397 |
| BsmAI | GTCTC | 2 cut(s) | 110, 152 |
| BsmBI | CGTCTC | 1 cut(s) | 152 |
| BsnI | GGCC | 1 cut(s) | 783 |
| Bsp143I | GATC | 3 cut(s) | 73, 294, 361 |
| BspACI | CCGC | 4 cut(s) | 754, 944, 972, 974 |
| BspANI | GGCC | 1 cut(s) | 783 |
| BspCNI | CTCAG | 2 cut(s) | 320, 433 |
| BspFNI | CGCG | 1 cut(s) | 974 |
| BspLI | GGNNCC | 3 cut(s) | 363, 445, 562 |
| BspMI | ACCTGC | 2 cut(s) | 29, 331 |
| BspPI | GGATC | 4 cut(s) | 68, 302, 356, 369 |
| BspT107I | GGYRCC | 1 cut(s) | 560 |
| BsrDI | GCAATG | 2 cut(s) | 213, 297 |
| BsrFI | RCCGGY | 1 cut(s) | 129 |
| BsrI | ACTGG | 4 cut(s) | 562, 617, 784, 854 |
| BssAI | RCCGGY | 1 cut(s) | 129 |
| BssECI | CCNNGG | 1 cut(s) | 972 |
| BssMI | GATC | 3 cut(s) | 73, 294, 361 |
| Bst2UI | CCWGG | 2 cut(s) | 441, 729 |
| Bst4CI | ACNGT | 4 cut(s) | 112, 318, 817, 876 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 464, 683 |
| BstC8I | GCNNGC | 4 cut(s) | 334, 486, 507, 870 |
| BstDEI | CTNAG | 3 cut(s) | 34, 307, 420 |
| BstDSI | CCRYGG | 1 cut(s) | 972 |
| BstF5I | GGATG | 1 cut(s) | 564 |
| BstFNI | CGCG | 1 cut(s) | 974 |
| BstHHI | GCGC | 1 cut(s) | 652 |
| BstKTI | GATC | 3 cut(s) | 76, 297, 364 |
| BstMAI | GTCTC | 2 cut(s) | 110, 152 |
| BstMBI | GATC | 3 cut(s) | 73, 294, 361 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 29, 308, 464, 658, 683, 869 |
| BstNI | CCWGG | 2 cut(s) | 441, 729 |
| BstNSI | RCATGY | 2 cut(s) | 105, 179 |
| BstSCI | CCNGG | 2 cut(s) | 439, 727 |
| BstUI | CGCG | 1 cut(s) | 974 |
| BstV1I | GCAGC | 4 cut(s) | 418, 670, 872, 898 |
| BstV2I | GAAGAC | 1 cut(s) | 974 |
| BstX2I | RGATCY | 2 cut(s) | 73, 361 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 253, 351, 571, 1018 |
| BstYI | RGATCY | 2 cut(s) | 73, 361 |
| BsuI | GTATCC | 1 cut(s) | 803 |
| BsuRI | GGCC | 1 cut(s) | 783 |
| BtgI | CCRYGG | 1 cut(s) | 972 |
| BtgZI | GCGATG | 1 cut(s) | 1011 |
| BtrI | CACGTC | 2 cut(s) | 273, 689 |
| BtsCI | GGATG | 1 cut(s) | 564 |
| BtsI | GCAGTG | 1 cut(s) | 916 |
| BtsIMutI | CAGTG | 4 cut(s) | 314, 634, 872, 916 |
| BveI | ACCTGC | 2 cut(s) | 29, 331 |
| Cac8I | GCNNGC | 4 cut(s) | 334, 486, 507, 870 |
| CaiI | CAGNNNCTG | 1 cut(s) | 683 |
| CfoI | GCGC | 1 cut(s) | 652 |
| Cfr10I | RCCGGY | 1 cut(s) | 129 |
| Cfr13I | GGNCC | 3 cut(s) | 132, 781, 826 |
| Cfr42I | CCGCGG | 1 cut(s) | 975 |
| CpoI | CGGWCCG | 1 cut(s) | 132 |
| Csp6I | GTAC | 2 cut(s) | 787, 887 |
| CspAI | ACCGGT | 1 cut(s) | 129 |
| CspI | CGGWCCG | 1 cut(s) | 132 |
| CviAII | CATG | 4 cut(s) | 102, 176, 181, 459 |
| CviQI | GTAC | 2 cut(s) | 787, 887 |
| DdeI | CTNAG | 3 cut(s) | 34, 307, 420 |
| DpnI | GATC | 3 cut(s) | 75, 296, 363 |
| DpnII | GATC | 3 cut(s) | 73, 294, 361 |
| DraI | TTTAAA | 1 cut(s) | 553 |
| DriI | GACNNNNNGTC | 1 cut(s) | 102 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 102 |
| Eco47I | GGWCC | 2 cut(s) | 132, 826 |
| Eco57I | CTGAAG | 2 cut(s) | 138, 1005 |
| EcoRII | CCWGG | 2 cut(s) | 439, 727 |
| Esp3I | CGTCTC | 1 cut(s) | 152 |
| FaeI | CATG | 4 cut(s) | 105, 179, 184, 462 |
| FatI | CATG | 4 cut(s) | 101, 175, 180, 458 |
| Fnu4HI | GCNGC | 5 cut(s) | 432, 684, 861, 912, 975 |
| FokI | GGATG | 1 cut(s) | 551 |
| Fsp4HI | GCNGC | 5 cut(s) | 432, 684, 861, 912, 975 |
| FspBI | CTAG | 1 cut(s) | 768 |
| GlaI | GCGC | 1 cut(s) | 651 |
| GluI | GCNGC | 5 cut(s) | 432, 684, 861, 912, 975 |
| GsuI | CTGGAG | 1 cut(s) | 600 |
| HaeIII | GGCC | 1 cut(s) | 783 |
| HapII | CCGG | 2 cut(s) | 130, 391 |
| HhaI | GCGC | 1 cut(s) | 652 |
| Hin1II | CATG | 4 cut(s) | 105, 179, 184, 462 |
| Hin6I | GCGC | 1 cut(s) | 650 |
| HinP1I | GCGC | 1 cut(s) | 650 |
| HinfI | GANTC | 1 cut(s) | 962 |
| HpaII | CCGG | 2 cut(s) | 130, 391 |
| HphI | GGTGA | 2 cut(s) | 725, 944 |
| Hpy166II | GTNNAC | 1 cut(s) | 411 |
| Hpy188I | TCNGA | 3 cut(s) | 157, 423, 902 |
| Hpy188III | TCNNGA | 2 cut(s) | 199, 268 |
| Hpy8I | GTNNAC | 1 cut(s) | 411 |
| HpyAV | CCTTC | 3 cut(s) | 162, 520, 1009 |
| HpyCH4III | ACNGT | 4 cut(s) | 112, 318, 817, 876 |
| HpyCH4IV | ACGT | 4 cut(s) | 9, 47, 272, 688 |
| HpyCH4V | TGCA | 9 cut(s) | 101, 206, 332, 434, 458, 635, 686, 800, 921 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 29, 308, 464, 658, 683, 869 |
| HpyF3I | CTNAG | 3 cut(s) | 34, 307, 420 |
| HpySE526I | ACGT | 4 cut(s) | 9, 47, 272, 688 |
| Hsp92II | CATG | 4 cut(s) | 105, 179, 184, 462 |
| HspAI | GCGC | 1 cut(s) | 650 |
| KspI | CCGCGG | 1 cut(s) | 975 |
| Kzo9I | GATC | 3 cut(s) | 73, 294, 361 |
| Lsp1109I | GCAGC | 4 cut(s) | 418, 670, 872, 898 |
| LweI | GCATC | 3 cut(s) | 637, 670, 988 |
| MaeI | CTAG | 1 cut(s) | 768 |
| MaeII | ACGT | 4 cut(s) | 9, 47, 272, 688 |
| MaeIII | GTNAC | 1 cut(s) | 318 |
| MalI | GATC | 3 cut(s) | 75, 296, 363 |
| MboI | GATC | 3 cut(s) | 73, 294, 361 |
| MboII | GAAGA | 5 cut(s) | 16, 601, 979, 998, 1001 |
| MfeI | CAATTG | 1 cut(s) | 834 |
| MflI | RGATCY | 2 cut(s) | 73, 361 |
| MluCI | AATT | 4 cut(s) | 435, 525, 834, 1005 |
| MlyI | GAGTC | 1 cut(s) | 971 |
| MmeI | TCCRAC | 1 cut(s) | 332 |
| MnlI | CCTC | 1 cut(s) | 839 |
| MseI | TTAA | 5 cut(s) | 44, 234, 258, 552, 792 |
| MslI | CAYNNNNRTG | 1 cut(s) | 737 |
| MspA1I | CMGCKG | 1 cut(s) | 974 |
| MspI | CCGG | 2 cut(s) | 130, 391 |
| MspR9I | CCNGG | 2 cut(s) | 441, 729 |
| MunI | CAATTG | 1 cut(s) | 834 |
| MvaI | CCWGG | 2 cut(s) | 441, 729 |
| MvnI | CGCG | 1 cut(s) | 974 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 29, 308, 464, 658, 683, 869 |
| NdeII | GATC | 3 cut(s) | 73, 294, 361 |
| NlaIII | CATG | 4 cut(s) | 105, 179, 184, 462 |
| NlaIV | GGNNCC | 3 cut(s) | 363, 445, 562 |
| NspI | RCATGY | 2 cut(s) | 105, 179 |
| PflFI | GACNNNGTC | 1 cut(s) | 163 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 372 |
| PfoI | TCCNGGA | 1 cut(s) | 439 |
| PinAI | ACCGGT | 1 cut(s) | 129 |
| PkrI | GCNGC | 5 cut(s) | 433, 685, 862, 913, 976 |
| PleI | GAGTC | 1 cut(s) | 970 |
| PpsI | GAGTC | 1 cut(s) | 970 |
| Psp1406I | AACGTT | 2 cut(s) | 9, 47 |
| Psp6I | CCWGG | 2 cut(s) | 439, 727 |
| PspGI | CCWGG | 2 cut(s) | 439, 727 |
| PspN4I | GGNNCC | 3 cut(s) | 363, 445, 562 |
| PspPI | GGNCC | 3 cut(s) | 132, 781, 826 |
| PstNI | CAGNNNCTG | 1 cut(s) | 683 |
| PsuI | RGATCY | 2 cut(s) | 73, 361 |
| PsyI | GACNNNGTC | 1 cut(s) | 163 |
| RsaI | GTAC | 2 cut(s) | 788, 888 |
| RsaNI | GTAC | 2 cut(s) | 787, 887 |
| RseI | CAYNNNNRTG | 1 cut(s) | 737 |
| Rsr2I | CGGWCCG | 1 cut(s) | 132 |
| RsrII | CGGWCCG | 1 cut(s) | 132 |
| SacII | CCGCGG | 1 cut(s) | 975 |
| SaqAI | TTAA | 5 cut(s) | 44, 234, 258, 552, 792 |
| SatI | GCNGC | 5 cut(s) | 432, 684, 861, 912, 975 |
| Sau3AI | GATC | 3 cut(s) | 73, 294, 361 |
| Sau96I | GGNCC | 3 cut(s) | 132, 781, 826 |
| ScaI | AGTACT | 1 cut(s) | 788 |
| SchI | GAGTC | 1 cut(s) | 971 |
| ScrFI | CCNGG | 2 cut(s) | 441, 729 |
| SfaNI | GCATC | 3 cut(s) | 637, 670, 988 |
| Sfr303I | CCGCGG | 1 cut(s) | 975 |
| SgrBI | CCGCGG | 1 cut(s) | 975 |
| SinI | GGWCC | 2 cut(s) | 132, 826 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 737 |
| Sse9I | AATT | 4 cut(s) | 435, 525, 834, 1005 |
| SsiI | CCGC | 4 cut(s) | 754, 944, 972, 974 |
| SspMI | CTAG | 1 cut(s) | 768 |
| StyD4I | CCNGG | 2 cut(s) | 439, 727 |
| TaaI | ACNGT | 4 cut(s) | 112, 318, 817, 876 |
| TaiI | ACGT | 4 cut(s) | 12, 50, 275, 691 |
| TaqI | TCGA | 1 cut(s) | 965 |
| TasI | AATT | 4 cut(s) | 435, 525, 834, 1005 |
| TatI | WGTACW | 1 cut(s) | 786 |
| TauI | GCSGC | 1 cut(s) | 977 |
| Tru1I | TTAA | 5 cut(s) | 44, 234, 258, 552, 792 |
| Tru9I | TTAA | 5 cut(s) | 44, 234, 258, 552, 792 |
| TscAI | CASTG | 4 cut(s) | 321, 634, 879, 923 |
| TseI | GCWGC | 4 cut(s) | 431, 683, 860, 911 |
| TspDTI | ATGAA | 3 cut(s) | 17, 186, 860 |
| TspGWI | ACGGA | 1 cut(s) | 124 |
| TspRI | CASTG | 4 cut(s) | 321, 634, 879, 923 |
| Tth111I | GACNNNGTC | 1 cut(s) | 163 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 372 |
| VpaK11BI | GGWCC | 2 cut(s) | 132, 826 |
| XceI | RCATGY | 2 cut(s) | 105, 179 |
| XspI | CTAG | 1 cut(s) | 768 |
| ZrmI | AGTACT | 1 cut(s) | 788 |