indole-3-acetic acid-amido synthetase GH3.1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G14960 |
| fragaria_vesca | FvH4_2g04750 |
| malus_domestica | MD05G1092300.v1.1 MD05G1092900.v1.1 |
| prunus_persica | Prupe.8G137900_v2.0.a1 |
| pyrus_communis | pycom05g09190 pycom05g09210 |
| rosa_chinensis | RchiOBHm_Chr6g0254401 |
| rosa_laevigata | RLG00000014915 |
| rosa_multiflora | Rmu_ssc0000481.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00210830 |
| rosa_rugosa | Rorug05G0552100 |
| rosa_samantha | Rh6AG069100 Rh6BG061700 Rh6CG061900 Rh6DG058900 |
| rosa_wichuraiana | Rw6G006070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1315 |
| AatII | GACGTC | 1 cut(s) | 927 |
| Acc65I | GGTACC | 1 cut(s) | 1660 |
| AccB1I | GGYRCC | 4 cut(s) | 182, 680, 1121, 1660 |
| AccBSI | CCGCTC | 1 cut(s) | 276 |
| AccI | GTMKAC | 2 cut(s) | 9, 576 |
| AccII | CGCG | 2 cut(s) | 1380, 1553 |
| AclI | AACGTT | 2 cut(s) | 962, 1601 |
| AclWI | GGATC | 2 cut(s) | 824, 1411 |
| AcoI | YGGCCR | 2 cut(s) | 554, 902 |
| AcsI | RAATTY | 2 cut(s) | 418, 897 |
| AcyI | GRCGYC | 4 cut(s) | 183, 681, 924, 1751 |
| AdeI | CACNNNGTG | 2 cut(s) | 494, 1267 |
| AfaI | GTAC | 9 cut(s) | 158, 458, 560, 629, 917, 1007, 1391, 1655, 1662 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 124, 342, 676, 900, 964, 1118, 1510, 1552, 1657 |
| AgeI | ACCGGT | 1 cut(s) | 511 |
| AgsI | TTSAA | 7 cut(s) | 110, 172, 254, 620, 1036, 1136, 1328 |
| AjnI | CCWGG | 1 cut(s) | 837 |
| AluBI | AGCT | 8 cut(s) | 321, 373, 388, 506, 727, 1324, 1398, 1612 |
| AluI | AGCT | 8 cut(s) | 321, 373, 388, 506, 727, 1324, 1398, 1612 |
| Alw21I | GWGCWC | 1 cut(s) | 375 |
| Alw26I | GTCTC | 7 cut(s) | 264, 404, 704, 741, 1072, 1199, 1478 |
| AlwI | GGATC | 2 cut(s) | 824, 1411 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 833 |
| Ama87I | CYCGRG | 1 cut(s) | 1420 |
| AoxI | GGCC | 6 cut(s) | 554, 646, 902, 1092, 1128, 1423 |
| ApeKI | GCWGC | 2 cut(s) | 1471, 1500 |
| ApoI | RAATTY | 2 cut(s) | 418, 897 |
| AsiGI | ACCGGT | 1 cut(s) | 511 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 543, 597 |
| Asp718I | GGTACC | 1 cut(s) | 1660 |
| AspLEI | GCGC | 3 cut(s) | 185, 683, 1723 |
| AspS9I | GGNCC | 3 cut(s) | 35, 1423, 1568 |
| AsuC2I | CCSGG | 5 cut(s) | 432, 492, 857, 1421, 1422 |
| AsuHPI | GGTGA | 2 cut(s) | 1226, 1600 |
| AvaI | CYCGRG | 1 cut(s) | 1420 |
| AvaII | GGWCC | 2 cut(s) | 35, 1568 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1652, 1685 |
| BalI | TGGCCA | 1 cut(s) | 904 |
| BanI | GGYRCC | 4 cut(s) | 182, 680, 1121, 1660 |
| BanII | GRGCYC | 1 cut(s) | 375 |
| BbsI | GAAGAC | 1 cut(s) | 977 |
| Bbv12I | GWGCWC | 1 cut(s) | 375 |
| BbvCI | CCTCAGC | 1 cut(s) | 1289 |
| BbvI | GCAGC | 2 cut(s) | 1483, 1487 |
| BceAI | ACGGC | 4 cut(s) | 541, 569, 668, 1115 |
| BciT130I | CCWGG | 1 cut(s) | 839 |
| BcnI | CCSGG | 5 cut(s) | 432, 492, 857, 1421, 1422 |
| BcoDI | GTCTC | 7 cut(s) | 264, 404, 704, 741, 1072, 1199, 1478 |
| BfaI | CTAG | 5 cut(s) | 318, 437, 1395, 1700, 1707 |
| BfmI | CTRYAG | 1 cut(s) | 973 |
| BfoI | RGCGCY | 2 cut(s) | 186, 684 |
| BglII | AGATCT | 1 cut(s) | 235 |
| BisI | GCNGC | 6 cut(s) | 166, 181, 646, 1378, 1472, 1501 |
| BlsI | GCNGC | 6 cut(s) | 167, 182, 647, 1379, 1473, 1502 |
| Bme1390I | CCNGG | 6 cut(s) | 432, 492, 839, 857, 1421, 1422 |
| Bme18I | GGWCC | 2 cut(s) | 35, 1568 |
| BmeT110I | CYCGRG | 1 cut(s) | 1420 |
| BmgT120I | GGNCC | 3 cut(s) | 35, 1423, 1568 |
| BmiI | GGNNCC | 7 cut(s) | 36, 184, 682, 940, 1123, 1376, 1662 |
| BmrFI | CCNGG | 6 cut(s) | 432, 492, 839, 857, 1421, 1422 |
| BmrI | ACTGGG | 1 cut(s) | 1450 |
| BmsI | GCATC | 4 cut(s) | 627, 1302, 1355, 1649 |
| BmuI | ACTGGG | 1 cut(s) | 1450 |
| BpiI | GAAGAC | 1 cut(s) | 977 |
| BpmI | CTGGAG | 3 cut(s) | 224, 707, 957 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1289 |
| BpuEI | CTTGAG | 1 cut(s) | 1615 |
| BpuMI | CCSGG | 5 cut(s) | 432, 492, 857, 1421, 1422 |
| BsaHI | GRCGYC | 4 cut(s) | 183, 681, 924, 1751 |
| BsaI | GGTCTC | 4 cut(s) | 264, 704, 741, 1199 |
| BsaJI | CCNNGG | 6 cut(s) | 30, 942, 1125, 1420, 1504, 1664 |
| BsaWI | WCCGGW | 2 cut(s) | 511, 812 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 851, 881, 998, 1028 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 124, 342, 676, 900, 964, 1118, 1510, 1552, 1657 |
| Bse118I | RCCGGY | 2 cut(s) | 511, 1536 |
| Bse1I | ACTGG | 5 cut(s) | 218, 522, 940, 1445, 1651 |
| Bse3DI | GCAATG | 1 cut(s) | 258 |
| BseBI | CCWGG | 1 cut(s) | 839 |
| BseDI | CCNNGG | 6 cut(s) | 30, 942, 1125, 1420, 1504, 1664 |
| BseGI | GGATG | 9 cut(s) | 295, 711, 770, 849, 1107, 1218, 1465, 1515, 1733 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 124, 342, 676, 900, 964, 1118, 1510, 1552, 1657 |
| BseMI | GCAATG | 1 cut(s) | 258 |
| BseMII | CTCAG | 5 cut(s) | 297, 647, 962, 1268, 1303 |
| BseNI | ACTGG | 5 cut(s) | 218, 522, 940, 1445, 1651 |
| BseRI | GAGGAG | 6 cut(s) | 392, 692, 1003, 1277, 1285, 1622 |
| BseX3I | CGGCCG | 1 cut(s) | 554 |
| BseXI | GCAGC | 2 cut(s) | 1483, 1487 |
| Bsh1236I | CGCG | 2 cut(s) | 1380, 1553 |
| Bsh1285I | CGRYCG | 4 cut(s) | 193, 379, 512, 557 |
| BshFI | GGCC | 6 cut(s) | 556, 648, 904, 1094, 1130, 1425 |
| BshNI | GGYRCC | 4 cut(s) | 182, 680, 1121, 1660 |
| BshTI | ACCGGT | 1 cut(s) | 511 |
| BsiEI | CGRYCG | 4 cut(s) | 193, 379, 512, 557 |
| BsiHKAI | GWGCWC | 1 cut(s) | 375 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1420 |
| BsiWI | CGTACG | 1 cut(s) | 558 |
| BslFI | GGGAC | 3 cut(s) | 48, 570, 591 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 124, 342, 676, 900, 964, 1118, 1510, 1552, 1657 |
| BsmAI | GTCTC | 7 cut(s) | 264, 404, 704, 741, 1072, 1199, 1478 |
| BsmFI | GGGAC | 3 cut(s) | 48, 570, 591 |
| BsmI | GAATGC | 1 cut(s) | 1348 |
| BsnI | GGCC | 6 cut(s) | 556, 648, 904, 1094, 1130, 1425 |
| Bso31I | GGTCTC | 4 cut(s) | 264, 704, 741, 1199 |
| BsoBI | CYCGRG | 1 cut(s) | 1420 |
| Bsp1286I | GDGCHC | 1 cut(s) | 375 |
| Bsp1407I | TGTACA | 1 cut(s) | 627 |
| Bsp143I | GATC | 4 cut(s) | 235, 376, 829, 1416 |
| Bsp19I | CCATGG | 1 cut(s) | 942 |
| BspANI | GGCC | 6 cut(s) | 556, 648, 904, 1094, 1130, 1425 |
| BspCNI | CTCAG | 5 cut(s) | 298, 646, 961, 1267, 1302 |
| BspFNI | CGCG | 2 cut(s) | 1380, 1553 |
| BspHI | TCATGA | 2 cut(s) | 1360, 1480 |
| BspLI | GGNNCC | 7 cut(s) | 36, 184, 682, 940, 1123, 1376, 1662 |
| BspPI | GGATC | 2 cut(s) | 824, 1411 |
| BspQI | GCTCTTC | 1 cut(s) | 363 |
| BspT107I | GGYRCC | 4 cut(s) | 182, 680, 1121, 1660 |
| BspTNI | GGTCTC | 4 cut(s) | 264, 704, 741, 1199 |
| BsrBI | CCGCTC | 1 cut(s) | 276 |
| BsrDI | GCAATG | 1 cut(s) | 258 |
| BsrFI | RCCGGY | 2 cut(s) | 511, 1536 |
| BsrGI | TGTACA | 1 cut(s) | 627 |
| BsrI | ACTGG | 5 cut(s) | 218, 522, 940, 1445, 1651 |
| BssAI | RCCGGY | 2 cut(s) | 511, 1536 |
| BssECI | CCNNGG | 6 cut(s) | 30, 942, 1125, 1420, 1504, 1664 |
| BssMI | GATC | 4 cut(s) | 235, 376, 829, 1416 |
| BssNI | GRCGYC | 4 cut(s) | 183, 681, 924, 1751 |
| BssT1I | CCWWGG | 5 cut(s) | 30, 942, 1125, 1504, 1664 |
| Bst2UI | CCWGG | 1 cut(s) | 839 |
| Bst4CI | ACNGT | 3 cut(s) | 106, 194, 398 |
| Bst6I | CTCTTC | 4 cut(s) | 28, 363, 1359, 1509 |
| BstACI | GRCGYC | 4 cut(s) | 183, 681, 924, 1751 |
| BstAUI | TGTACA | 1 cut(s) | 627 |
| BstC8I | GCNNGC | 3 cut(s) | 139, 386, 997 |
| BstDEI | CTNAG | 6 cut(s) | 306, 633, 912, 948, 1254, 1289 |
| BstDSI | CCRYGG | 1 cut(s) | 942 |
| BstF5I | GGATG | 9 cut(s) | 295, 711, 770, 849, 1107, 1218, 1465, 1515, 1733 |
| BstFNI | CGCG | 2 cut(s) | 1380, 1553 |
| BstH2I | RGCGCY | 2 cut(s) | 186, 684 |
| BstHHI | GCGC | 3 cut(s) | 185, 683, 1723 |
| BstKTI | GATC | 4 cut(s) | 238, 379, 832, 1419 |
| BstMAI | GTCTC | 7 cut(s) | 264, 404, 704, 741, 1072, 1199, 1478 |
| BstMBI | GATC | 4 cut(s) | 235, 376, 829, 1416 |
| BstMCI | CGRYCG | 4 cut(s) | 193, 379, 512, 557 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 143, 689, 861, 1750 |
| BstNI | CCWGG | 1 cut(s) | 839 |
| BstNSI | RCATGY | 1 cut(s) | 811 |
| BstSCI | CCNGG | 6 cut(s) | 430, 490, 837, 855, 1419, 1420 |
| BstSFI | CTRYAG | 1 cut(s) | 973 |
| BstUI | CGCG | 2 cut(s) | 1380, 1553 |
| BstV1I | GCAGC | 2 cut(s) | 1483, 1487 |
| BstV2I | GAAGAC | 1 cut(s) | 977 |
| BstX2I | RGATCY | 2 cut(s) | 235, 829 |
| BstYI | RGATCY | 2 cut(s) | 235, 829 |
| BstZI | CGGCCG | 1 cut(s) | 554 |
| BsuRI | GGCC | 6 cut(s) | 556, 648, 904, 1094, 1130, 1425 |
| BtgI | CCRYGG | 1 cut(s) | 942 |
| BtsCI | GGATG | 9 cut(s) | 295, 711, 770, 849, 1107, 1218, 1465, 1515, 1733 |
| Cac8I | GCNNGC | 3 cut(s) | 139, 386, 997 |
| CaiI | CAGNNNCTG | 1 cut(s) | 833 |
| CciI | TCATGA | 2 cut(s) | 1360, 1480 |
| CfoI | GCGC | 3 cut(s) | 185, 683, 1723 |
| Cfr10I | RCCGGY | 2 cut(s) | 511, 1536 |
| Cfr13I | GGNCC | 3 cut(s) | 35, 1423, 1568 |
| Cfr9I | CCCGGG | 1 cut(s) | 1420 |
| CseI | GACGC | 2 cut(s) | 65, 1759 |
| Csp6I | GTAC | 9 cut(s) | 157, 457, 559, 628, 916, 1006, 1390, 1654, 1661 |
| CspAI | ACCGGT | 1 cut(s) | 511 |
| CviAII | CATG | 9 cut(s) | 406, 749, 808, 943, 1003, 1081, 1090, 1361, 1481 |
| CviQI | GTAC | 9 cut(s) | 157, 457, 559, 628, 916, 1006, 1390, 1654, 1661 |
| DdeI | CTNAG | 6 cut(s) | 306, 633, 912, 948, 1254, 1289 |
| DinI | GGCGCC | 2 cut(s) | 184, 682 |
| DpnI | GATC | 4 cut(s) | 237, 378, 831, 1418 |
| DpnII | GATC | 4 cut(s) | 235, 376, 829, 1416 |
| DraI | TTTAAA | 1 cut(s) | 205 |
| DraIII | CACNNNGTG | 2 cut(s) | 494, 1267 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1315 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1315 |
| EaeI | YGGCCR | 2 cut(s) | 554, 902 |
| EagI | CGGCCG | 1 cut(s) | 554 |
| Eam1104I | CTCTTC | 4 cut(s) | 28, 363, 1359, 1509 |
| EarI | CTCTTC | 4 cut(s) | 28, 363, 1359, 1509 |
| EciI | GGCGGA | 3 cut(s) | 140, 152, 842 |
| Ecl136II | GAGCTC | 1 cut(s) | 373 |
| EclXI | CGGCCG | 1 cut(s) | 554 |
| Eco130I | CCWWGG | 5 cut(s) | 30, 942, 1125, 1504, 1664 |
| Eco24I | GRGCYC | 1 cut(s) | 375 |
| Eco31I | GGTCTC | 4 cut(s) | 264, 704, 741, 1199 |
| Eco47I | GGWCC | 2 cut(s) | 35, 1568 |
| Eco52I | CGGCCG | 1 cut(s) | 554 |
| Eco53kI | GAGCTC | 1 cut(s) | 373 |
| Eco88I | CYCGRG | 1 cut(s) | 1420 |
| EcoICRI | GAGCTC | 1 cut(s) | 373 |
| EcoO109I | RGGNCCY | 1 cut(s) | 35 |
| EcoRII | CCWGG | 1 cut(s) | 837 |
| EcoT14I | CCWWGG | 5 cut(s) | 30, 942, 1125, 1504, 1664 |
| EcoT22I | ATGCAT | 2 cut(s) | 809, 1348 |
| EcoT38I | GRGCYC | 1 cut(s) | 375 |
| EgeI | GGCGCC | 2 cut(s) | 184, 682 |
| EheI | GGCGCC | 2 cut(s) | 184, 682 |
| ErhI | CCWWGG | 5 cut(s) | 30, 942, 1125, 1504, 1664 |
| FaeI | CATG | 9 cut(s) | 409, 752, 811, 946, 1006, 1084, 1093, 1364, 1484 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 102, 134 |
| FaqI | GGGAC | 3 cut(s) | 48, 570, 591 |
| FatI | CATG | 9 cut(s) | 405, 748, 807, 942, 1002, 1080, 1089, 1360, 1480 |
| FblI | GTMKAC | 2 cut(s) | 9, 576 |
| Fnu4HI | GCNGC | 6 cut(s) | 166, 181, 646, 1378, 1472, 1501 |
| FokI | GGATG | 9 cut(s) | 282, 698, 777, 836, 1094, 1205, 1472, 1522, 1720 |
| FriOI | GRGCYC | 1 cut(s) | 375 |
| Fsp4HI | GCNGC | 6 cut(s) | 166, 181, 646, 1378, 1472, 1501 |
| FspBI | CTAG | 5 cut(s) | 318, 437, 1395, 1700, 1707 |
| GlaI | GCGC | 3 cut(s) | 184, 682, 1722 |
| GluI | GCNGC | 6 cut(s) | 166, 181, 646, 1378, 1472, 1501 |
| GsuI | CTGGAG | 3 cut(s) | 224, 707, 957 |
| HaeII | RGCGCY | 2 cut(s) | 186, 684 |
| HaeIII | GGCC | 6 cut(s) | 556, 648, 904, 1094, 1130, 1425 |
| HgaI | GACGC | 2 cut(s) | 65, 1759 |
| HhaI | GCGC | 3 cut(s) | 185, 683, 1723 |
| Hin1I | GRCGYC | 4 cut(s) | 183, 681, 924, 1751 |
| Hin1II | CATG | 9 cut(s) | 409, 752, 811, 946, 1006, 1084, 1093, 1364, 1484 |
| Hin6I | GCGC | 3 cut(s) | 183, 681, 1721 |
| HinP1I | GCGC | 3 cut(s) | 183, 681, 1721 |
| HphI | GGTGA | 2 cut(s) | 1226, 1600 |
| Hpy166II | GTNNAC | 7 cut(s) | 10, 539, 577, 630, 1392, 1534, 1675 |
| Hpy8I | GTNNAC | 7 cut(s) | 10, 539, 577, 630, 1392, 1534, 1675 |
| Hpy99I | CGWCG | 2 cut(s) | 384, 1316 |
| HpyAV | CCTTC | 4 cut(s) | 46, 77, 1232, 1755 |
| HpyCH4III | ACNGT | 3 cut(s) | 106, 194, 398 |
| HpyCH4IV | ACGT | 5 cut(s) | 573, 924, 962, 1281, 1601 |
| HpyCH4V | TGCA | 5 cut(s) | 807, 864, 999, 1346, 1640 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 143, 689, 861, 1750 |
| HpyF3I | CTNAG | 6 cut(s) | 306, 633, 912, 948, 1254, 1289 |
| HpySE526I | ACGT | 5 cut(s) | 573, 924, 962, 1281, 1601 |
| Hsp92I | GRCGYC | 4 cut(s) | 183, 681, 924, 1751 |
| Hsp92II | CATG | 9 cut(s) | 409, 752, 811, 946, 1006, 1084, 1093, 1364, 1484 |
| HspAI | GCGC | 3 cut(s) | 183, 681, 1721 |
| KasI | GGCGCC | 2 cut(s) | 182, 680 |
| KpnI | GGTACC | 1 cut(s) | 1664 |
| Kzo9I | GATC | 4 cut(s) | 235, 376, 829, 1416 |
| LguI | GCTCTTC | 1 cut(s) | 363 |
| LmnI | GCTCC | 4 cut(s) | 732, 938, 1374, 1609 |
| Lsp1109I | GCAGC | 2 cut(s) | 1483, 1487 |
| LweI | GCATC | 4 cut(s) | 627, 1302, 1355, 1649 |
| MaeI | CTAG | 5 cut(s) | 318, 437, 1395, 1700, 1707 |
| MaeII | ACGT | 5 cut(s) | 573, 924, 962, 1281, 1601 |
| MaeIII | GTNAC | 7 cut(s) | 549, 931, 1022, 1177, 1214, 1228, 1695 |
| MalI | GATC | 4 cut(s) | 237, 378, 831, 1418 |
| MbiI | CCGCTC | 1 cut(s) | 276 |
| MboI | GATC | 4 cut(s) | 235, 376, 829, 1416 |
| MboII | GAAGA | 9 cut(s) | 15, 223, 245, 380, 977, 1288, 1349, 1376, 1526 |
| MfeI | CAATTG | 1 cut(s) | 874 |
| MflI | RGATCY | 2 cut(s) | 235, 829 |
| MhlI | GDGCHC | 1 cut(s) | 375 |
| MlsI | TGGCCA | 1 cut(s) | 904 |
| MluCI | AATT | 4 cut(s) | 418, 874, 897, 1644 |
| MluNI | TGGCCA | 1 cut(s) | 904 |
| Mly113I | GGCGCC | 2 cut(s) | 183, 681 |
| MlyI | GAGTC | 9 cut(s) | 5, 767, 1236, 1292, 1325, 1480, 1486, 1526, 1557 |
| MmeI | TCCRAC | 4 cut(s) | 39, 849, 945, 1546 |
| Mox20I | TGGCCA | 1 cut(s) | 904 |
| Mph1103I | ATGCAT | 2 cut(s) | 809, 1348 |
| MroXI | GAANNNNTTC | 2 cut(s) | 543, 597 |
| MscI | TGGCCA | 1 cut(s) | 904 |
| MseI | TTAA | 6 cut(s) | 204, 363, 471, 1041, 1523, 1647 |
| MslI | CAYNNNNRTG | 2 cut(s) | 635, 1079 |
| Msp20I | TGGCCA | 1 cut(s) | 904 |
| MspR9I | CCNGG | 6 cut(s) | 432, 492, 839, 857, 1421, 1422 |
| MunI | CAATTG | 1 cut(s) | 874 |
| Mva1269I | GAATGC | 1 cut(s) | 1348 |
| MvaI | CCWGG | 1 cut(s) | 839 |
| MvnI | CGCG | 2 cut(s) | 1380, 1553 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 143, 689, 861, 1750 |
| NarI | GGCGCC | 2 cut(s) | 183, 681 |
| NciI | CCSGG | 5 cut(s) | 432, 492, 857, 1421, 1422 |
| NcoI | CCATGG | 1 cut(s) | 942 |
| NdeII | GATC | 4 cut(s) | 235, 376, 829, 1416 |
| NlaIII | CATG | 9 cut(s) | 409, 752, 811, 946, 1006, 1084, 1093, 1364, 1484 |
| NlaIV | GGNNCC | 7 cut(s) | 36, 184, 682, 940, 1123, 1376, 1662 |
| NmeAIII | GCCGAG | 2 cut(s) | 1411, 1571 |
| NmuCI | GTSAC | 4 cut(s) | 549, 1177, 1214, 1228 |
| NsiI | ATGCAT | 2 cut(s) | 809, 1348 |
| NspI | RCATGY | 1 cut(s) | 811 |
| PagI | TCATGA | 2 cut(s) | 1360, 1480 |
| PciSI | GCTCTTC | 1 cut(s) | 363 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 102, 150, 474, 1014, 1602 |
| PctI | GAATGC | 1 cut(s) | 1348 |
| PdmI | GAANNNNTTC | 2 cut(s) | 543, 597 |
| PfeI | GAWTC | 5 cut(s) | 130, 214, 250, 611, 1703 |
| Pfl23II | CGTACG | 1 cut(s) | 558 |
| PinAI | ACCGGT | 1 cut(s) | 511 |
| PkrI | GCNGC | 6 cut(s) | 167, 182, 647, 1379, 1473, 1502 |
| Ple19I | CGATCG | 1 cut(s) | 379 |
| PleI | GAGTC | 9 cut(s) | 5, 767, 1235, 1292, 1324, 1480, 1486, 1525, 1556 |
| PluTI | GGCGCC | 2 cut(s) | 186, 684 |
| PpsI | GAGTC | 9 cut(s) | 5, 767, 1235, 1292, 1324, 1480, 1486, 1525, 1556 |
| PpuMI | RGGWCCY | 1 cut(s) | 35 |
| Psp124BI | GAGCTC | 1 cut(s) | 375 |
| Psp1406I | AACGTT | 2 cut(s) | 962, 1601 |
| Psp5II | RGGWCCY | 1 cut(s) | 35 |
| Psp6I | CCWGG | 1 cut(s) | 837 |
| PspGI | CCWGG | 1 cut(s) | 837 |
| PspLI | CGTACG | 1 cut(s) | 558 |
| PspN4I | GGNNCC | 7 cut(s) | 36, 184, 682, 940, 1123, 1376, 1662 |
| PspPI | GGNCC | 3 cut(s) | 35, 1423, 1568 |
| PspPPI | RGGWCCY | 1 cut(s) | 35 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 449, 481 |
| PstNI | CAGNNNCTG | 1 cut(s) | 833 |
| PsuI | RGATCY | 2 cut(s) | 235, 829 |
| PvuI | CGATCG | 1 cut(s) | 379 |
| RsaI | GTAC | 9 cut(s) | 158, 458, 560, 629, 917, 1007, 1391, 1655, 1662 |
| RsaNI | GTAC | 9 cut(s) | 157, 457, 559, 628, 916, 1006, 1390, 1654, 1661 |
| RseI | CAYNNNNRTG | 2 cut(s) | 635, 1079 |
| SacI | GAGCTC | 1 cut(s) | 375 |
| SapI | GCTCTTC | 1 cut(s) | 363 |
| SaqAI | TTAA | 6 cut(s) | 204, 363, 471, 1041, 1523, 1647 |
| SatI | GCNGC | 6 cut(s) | 166, 181, 646, 1378, 1472, 1501 |
| Sau3AI | GATC | 4 cut(s) | 235, 376, 829, 1416 |
| Sau96I | GGNCC | 3 cut(s) | 35, 1423, 1568 |
| SchI | GAGTC | 9 cut(s) | 5, 767, 1236, 1292, 1325, 1480, 1486, 1526, 1557 |
| ScrFI | CCNGG | 6 cut(s) | 432, 492, 839, 857, 1421, 1422 |
| SduI | GDGCHC | 1 cut(s) | 375 |
| SfaNI | GCATC | 4 cut(s) | 627, 1302, 1355, 1649 |
| SfcI | CTRYAG | 1 cut(s) | 973 |
| SfoI | GGCGCC | 2 cut(s) | 184, 682 |
| SinI | GGWCC | 2 cut(s) | 35, 1568 |
| SmaI | CCCGGG | 1 cut(s) | 1422 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 635, 1079 |
| SmlI | CTYRAG | 1 cut(s) | 1630 |
| SmoI | CTYRAG | 1 cut(s) | 1630 |
| Sse9I | AATT | 4 cut(s) | 418, 874, 897, 1644 |
| SspDI | GGCGCC | 2 cut(s) | 182, 680 |
| SspMI | CTAG | 5 cut(s) | 318, 437, 1395, 1700, 1707 |
| SstI | GAGCTC | 1 cut(s) | 375 |
| StyD4I | CCNGG | 6 cut(s) | 430, 490, 837, 855, 1419, 1420 |
| StyI | CCWWGG | 5 cut(s) | 30, 942, 1125, 1504, 1664 |
| TaaI | ACNGT | 3 cut(s) | 106, 194, 398 |
| TaiI | ACGT | 5 cut(s) | 576, 927, 965, 1284, 1604 |
| TaqI | TCGA | 9 cut(s) | 78, 375, 508, 756, 1101, 1201, 1225, 1296, 1605 |
| TaqII | GACCGA | 2 cut(s) | 537, 1325 |
| TasI | AATT | 4 cut(s) | 418, 874, 897, 1644 |
| TatI | WGTACW | 4 cut(s) | 456, 627, 1389, 1653 |
| TauI | GCSGC | 4 cut(s) | 168, 183, 648, 1380 |
| TfiI | GAWTC | 5 cut(s) | 130, 214, 250, 611, 1703 |
| Tru1I | TTAA | 6 cut(s) | 204, 363, 471, 1041, 1523, 1647 |
| Tru9I | TTAA | 6 cut(s) | 204, 363, 471, 1041, 1523, 1647 |
| TseFI | GTSAC | 4 cut(s) | 549, 1177, 1214, 1228 |
| TseI | GCWGC | 2 cut(s) | 1471, 1500 |
| Tsp45I | GTSAC | 4 cut(s) | 549, 1177, 1214, 1228 |
| TspDTI | ATGAA | 8 cut(s) | 64, 431, 603, 838, 1096, 1182, 1349, 1377 |
| TspGWI | ACGGA | 2 cut(s) | 695, 1611 |
| TspMI | CCCGGG | 1 cut(s) | 1420 |
| VpaK11BI | GGWCC | 2 cut(s) | 35, 1568 |
| XapI | RAATTY | 2 cut(s) | 418, 897 |
| XbaI | TCTAGA | 1 cut(s) | 436 |
| XceI | RCATGY | 1 cut(s) | 811 |
| XmaI | CCCGGG | 1 cut(s) | 1420 |
| XmiI | GTMKAC | 2 cut(s) | 9, 576 |
| XmnI | GAANNNNTTC | 2 cut(s) | 543, 597 |
| XspI | CTAG | 5 cut(s) | 318, 437, 1395, 1700, 1707 |
| ZraI | GACGTC | 1 cut(s) | 925 |
| Zsp2I | ATGCAT | 2 cut(s) | 809, 1348 |