Rh6BG061700

Indole-3-acetic acid-amido synthetase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0013876
Physical Location & Seq
Reverse (-)
9758161 .. 9759327
1167 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG061700.1

Sequence Viewer

Length: 1167 bp
ATGTACACTCAAATGCTCTGTGGCCTCCTCGAGCGCCACCAAGTCCTCCGCCTCGGCGCCGTTTTCGCCTCCGGTCTACTCCGCGCCATCCACTTCCTCCAGCTCAACTGGCAGCAACTCGCCGCCGACATCCGCACCGGAACACTCAACCCCAAAATTACCGACCCGGAGTTGAGGGGATGCATGGAGCGGAAACTGAAACCCGAGCCTGAGCTTGCTGAGTTCGTTGCCGAACAATGCGGCGAGGAGAATTGGCAGGGAATCATAACCCGAATTTGGCCCAGTACAAAATACCTCGACGTCATCGTCACCGGAGCTATGGCCCAGTATATTCCGACTTTGGATTACTACAGCGGCGGCTTACCCATGGCCTGCACCATGTACGCTTCGTCCGAGTGTTACTTCGGACTCAACCTGAACCCCATGTGCAGACCTTCTGAAGTTTCATACACAATTATGCCGAACATGGCTTACTTCGAGTTCCTCCCCTACGAGCCCAACTCAGTGAGTCTTGACCCGACCCGACTCGTTGAACTGGTCGACGTGGTGGTCGGAAAAGAATACGAGCTCGTTATTACCACTTACGCCGGACTCTACCGCTACCGCGTCGGCGACATTCTCCGGGTCACCGGGTTCCACAACTCGGCGCCGCAGTTCCACTTCGTGCGGCGGAAGAACGTCCTGCTCAGCATTGACTCCGACAAGACCGACGAGGCGGAGCTCCAGCTCGCCGTCGACAACGCCACCAAGCTCGTCCTGGAGAAGCTCAACGCCAGCGTGGTGGAGTACACCAGCTTCGCCGACACCAAGACCATCCCGGGCCACTACGTCATCTACTGGGAGCTTCTAGTCAAGGACTCGGCCGAGTCGCCCAGCCCGGAATCGCTGAGTCAGTGCTGCTTGGCCATGGAGGAATCGCTCAACTCGGTTTACCGGCAGTGCCGGGTGGCGGACAACTCGATCGGGCCGTTGGAGATTCGTGTGGTGAAGAGCGGCACGTTCGAGGAGTTGATGGACTACGCGATCTCGAGAGGCGCGTCGATTAACCAGTATAAGGTGCCGCGGTGTGTGAATTTTACCCCGATAATGGAGTTACTGGACTCCAGGGTGGTTTCCAAGCATTTTAGCCCTTCTTTACCGCATTGGACCCCGGAAAGGAGACGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
GH3

Protein Analysis

388

Amino Acids

44.03

Weight (kDa)

5.42

Isoelectric Point (pI)

38.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GH3 PF03321 1 - 123 2.6e-44 GH3 family N-terminal domain
GH3_M PF23571 150 - 224 1.8e-30 GH3 family central domain
GH3_C PF23572 240 - 359 2.2e-40 GH3 family C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013876)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G14960
fragaria_vesca FvH4_2g04750
malus_domestica MD05G1092300.v1.1 MD05G1092900.v1.1
prunus_persica Prupe.8G137900_v2.0.a1
pyrus_communis pycom05g09190 pycom05g09210
rosa_chinensis RchiOBHm_Chr6g0254401
rosa_laevigata RLG00000014915
rosa_multiflora Rmu_ssc0000481.1_g000001
rosa_roxburghii Rroxscaffold_7G00210830
rosa_rugosa Rorug05G0552100
rosa_samantha Rh6AG069100 Rh6BG061700 Rh6CG061900 Rh6DG058900
rosa_wichuraiana Rw6G006070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 305, 548
AatII GACGTC 1 cut(s) 303
AccB1I GGYRCC 3 cut(s) 56, 646, 1057
AccBSI CCGCTC 2 cut(s) 190, 993
AccI GTMKAC 3 cut(s) 76, 540, 735
AccII CGCG 5 cut(s) 84, 606, 1022, 1037, 1063
AcoI YGGCCR 2 cut(s) 861, 903
AcsI RAATTY 2 cut(s) 273, 1072
AcuI CTGAAG 1 cut(s) 459
AcyI GRCGYC 3 cut(s) 57, 300, 647
AdeI CACNNNGTG 1 cut(s) 664
AfaI GTAC 4 cut(s) 5, 286, 383, 788
AfiI CCNNNNNNNGG 6 cut(s) 276, 643, 949, 1054, 1087, 1155
AgsI TTSAA 1 cut(s) 533
AjiI CACGTC 1 cut(s) 544
AjnI CCWGG 2 cut(s) 756, 1103
Alw21I GWGCWC 2 cut(s) 570, 723
Alw26I GTCTC 1 cut(s) 1153
Ama87I CYCGRG 4 cut(s) 29, 203, 817, 1027
AoxI GGCC 8 cut(s) 22, 278, 321, 369, 820, 861, 903, 965
ApeKI GCWGC 2 cut(s) 112, 897
ApoI RAATTY 2 cut(s) 273, 1072
AspLEI GCGC 5 cut(s) 36, 59, 86, 649, 1037
AspS9I GGNCC 5 cut(s) 279, 322, 820, 965, 1146
AsuC2I CCSGG 8 cut(s) 167, 623, 631, 818, 819, 878, 944, 1151
AsuHPI GGTGA 3 cut(s) 301, 619, 997
AvaI CYCGRG 4 cut(s) 29, 203, 817, 1027
AvaII GGWCC 1 cut(s) 1146
BalI TGGCCA 1 cut(s) 905
BanI GGYRCC 3 cut(s) 56, 646, 1057
BanII GRGCYC 3 cut(s) 498, 570, 723
BarI GAAGNNNNNNTAC 2 cut(s) 779, 811
Bbv12I GWGCWC 2 cut(s) 570, 723
BbvI GCAGC 2 cut(s) 124, 884
BccI CCATC 3 cut(s) 95, 821, 1006
BceAI ACGGC 3 cut(s) 44, 716, 952
BciT130I CCWGG 2 cut(s) 758, 1105
BcnI CCSGG 8 cut(s) 167, 623, 631, 818, 819, 878, 944, 1151
BcoDI GTCTC 1 cut(s) 1153
BfaI CTAG 1 cut(s) 848
BfmI CTRYAG 1 cut(s) 349
BfoI RGCGCY 3 cut(s) 37, 60, 650
BlpI GCTNAGC 1 cut(s) 686
Bme18I GGWCC 1 cut(s) 1146
BmeT110I CYCGRG 4 cut(s) 29, 203, 817, 1027
BmgBI CACGTC 1 cut(s) 544
BmgT120I GGNCC 5 cut(s) 279, 322, 820, 965, 1146
BmiI GGNNCC 5 cut(s) 58, 635, 648, 1059, 1148
BmrI ACTGGG 3 cut(s) 276, 319, 847
BmsI GCATC 1 cut(s) 170
BmuI ACTGGG 3 cut(s) 276, 319, 847
BplI GAGNNNNNCTC 2 cut(s) 485, 517
BpmI CTGGAG 4 cut(s) 83, 707, 779, 1087
Bpu10I CCTNAGC 1 cut(s) 210
Bpu1102I GCTNAGC 1 cut(s) 686
BpuMI CCSGG 8 cut(s) 167, 623, 631, 818, 819, 878, 944, 1151
BsaHI GRCGYC 3 cut(s) 57, 300, 647
BsaJI CCNNGG 7 cut(s) 52, 366, 817, 906, 1061, 1104, 1149
BsaWI WCCGGW 3 cut(s) 71, 137, 311
Bsc4I CCNNNNNNNGG 6 cut(s) 276, 643, 949, 1054, 1087, 1155
Bse118I RCCGGY 1 cut(s) 933
Bse1I ACTGG 7 cut(s) 113, 282, 325, 540, 842, 1048, 1101
BseBI CCWGG 2 cut(s) 758, 1105
BseDI CCNNGG 7 cut(s) 52, 366, 817, 906, 1061, 1104, 1149
BseGI GGATG 4 cut(s) 87, 129, 185, 813
BseLI CCNNNNNNNGG 6 cut(s) 276, 643, 949, 1054, 1087, 1155
BseMII CTCAG 5 cut(s) 201, 210, 516, 700, 878
BseNI ACTGG 7 cut(s) 113, 282, 325, 540, 842, 1048, 1101
BseRI GAGGAG 3 cut(s) 17, 260, 1019
BseX3I CGGCCG 1 cut(s) 861
BseXI GCAGC 2 cut(s) 124, 884
BseYI CCCAGC 1 cut(s) 872
BsgI GTGCAG 2 cut(s) 358, 448
Bsh1236I CGCG 5 cut(s) 84, 606, 1022, 1037, 1063
Bsh1285I CGRYCG 2 cut(s) 864, 963
BshFI GGCC 8 cut(s) 24, 280, 323, 371, 822, 863, 905, 967
BshNI GGYRCC 3 cut(s) 56, 646, 1057
BsiEI CGRYCG 2 cut(s) 864, 963
BsiHKAI GWGCWC 2 cut(s) 570, 723
BsiHKCI CYCGRG 4 cut(s) 29, 203, 817, 1027
BslI CCNNNNNNNGG 6 cut(s) 276, 643, 949, 1054, 1087, 1155
BsmAI GTCTC 1 cut(s) 1153
BsmBI CGTCTC 1 cut(s) 1153
BsnI GGCC 8 cut(s) 24, 280, 323, 371, 822, 863, 905, 967
BsoBI CYCGRG 4 cut(s) 29, 203, 817, 1027
Bsp1286I GDGCHC 3 cut(s) 498, 570, 723
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 2 cut(s) 960, 1023
Bsp1720I GCTNAGC 1 cut(s) 686
Bsp19I CCATGG 2 cut(s) 366, 906
BspANI GGCC 8 cut(s) 24, 280, 323, 371, 822, 863, 905, 967
BspCNI CTCAG 5 cut(s) 202, 211, 515, 699, 879
BspFNI CGCG 5 cut(s) 84, 606, 1022, 1037, 1063
BspLI GGNNCC 5 cut(s) 58, 635, 648, 1059, 1148
BspQI GCTCTTC 1 cut(s) 983
BspT107I GGYRCC 3 cut(s) 56, 646, 1057
BsrBI CCGCTC 2 cut(s) 190, 993
BsrFI RCCGGY 1 cut(s) 933
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 7 cut(s) 113, 282, 325, 540, 842, 1048, 1101
BssAI RCCGGY 1 cut(s) 933
BssECI CCNNGG 7 cut(s) 52, 366, 817, 906, 1061, 1104, 1149
BssMI GATC 2 cut(s) 960, 1023
BssNI GRCGYC 3 cut(s) 57, 300, 647
BssT1I CCWWGG 2 cut(s) 366, 906
Bst2UI CCWGG 2 cut(s) 758, 1105
Bst4CI ACNGT 1 cut(s) 1164
Bst6I CTCTTC 1 cut(s) 983
BstACI GRCGYC 3 cut(s) 57, 300, 647
BstAUI TGTACA 1 cut(s) 3
BstC8I GCNNGC 4 cut(s) 216, 373, 729, 775
BstDEI CTNAG 5 cut(s) 210, 219, 502, 686, 887
BstDSI CCRYGG 3 cut(s) 366, 906, 1061
BstEII GGTNACC 1 cut(s) 625
BstF5I GGATG 4 cut(s) 87, 129, 185, 813
BstFNI CGCG 5 cut(s) 84, 606, 1022, 1037, 1063
BstH2I RGCGCY 3 cut(s) 37, 60, 650
BstHHI GCGC 5 cut(s) 36, 59, 86, 649, 1037
BstKTI GATC 2 cut(s) 963, 1026
BstMAI GTCTC 1 cut(s) 1153
BstMBI GATC 2 cut(s) 960, 1023
BstMCI CGRYCG 2 cut(s) 864, 963
BstMWI GCNNNNNNNGC 2 cut(s) 65, 109
BstNI CCWGG 2 cut(s) 758, 1105
BstPI GGTNACC 1 cut(s) 625
BstSFI CTRYAG 1 cut(s) 349
BstUI CGCG 5 cut(s) 84, 606, 1022, 1037, 1063
BstV1I GCAGC 2 cut(s) 124, 884
BstXI CCANNNNNNTGG 1 cut(s) 781
BstZI CGGCCG 1 cut(s) 861
BsuRI GGCC 8 cut(s) 24, 280, 323, 371, 822, 863, 905, 967
BtgI CCRYGG 3 cut(s) 366, 906, 1061
BtrI CACGTC 1 cut(s) 544
BtsCI GGATG 4 cut(s) 87, 129, 185, 813
BtsI GCAGTG 1 cut(s) 944
BtsIMutI CAGTG 3 cut(s) 510, 899, 944
Cac8I GCNNGC 4 cut(s) 216, 373, 729, 775
CfoI GCGC 5 cut(s) 36, 59, 86, 649, 1037
Cfr10I RCCGGY 1 cut(s) 933
Cfr13I GGNCC 5 cut(s) 279, 322, 820, 965, 1146
Cfr42I CCGCGG 1 cut(s) 1064
Cfr9I CCCGGG 1 cut(s) 817
CseI GACGC 2 cut(s) 595, 1026
Csp6I GTAC 4 cut(s) 4, 285, 382, 787
CviAII CATG 6 cut(s) 184, 367, 379, 424, 466, 907
CviQI GTAC 4 cut(s) 4, 285, 382, 787
DdeI CTNAG 5 cut(s) 210, 219, 502, 686, 887
DinI GGCGCC 2 cut(s) 58, 648
DpnI GATC 2 cut(s) 962, 1025
DpnII GATC 2 cut(s) 960, 1023
DraIII CACNNNGTG 1 cut(s) 664
DrdI GACNNNNNNGTC 2 cut(s) 305, 548
DseDI GACNNNNNNGTC 2 cut(s) 305, 548
EaeI YGGCCR 2 cut(s) 861, 903
EagI CGGCCG 1 cut(s) 861
Eam1104I CTCTTC 1 cut(s) 983
EarI CTCTTC 1 cut(s) 983
EciI GGCGGA 4 cut(s) 38, 685, 731, 965
Ecl136II GAGCTC 2 cut(s) 568, 721
EclXI CGGCCG 1 cut(s) 861
Eco130I CCWWGG 2 cut(s) 366, 906
Eco24I GRGCYC 3 cut(s) 498, 570, 723
Eco47I GGWCC 1 cut(s) 1146
Eco52I CGGCCG 1 cut(s) 861
Eco53kI GAGCTC 2 cut(s) 568, 721
Eco57I CTGAAG 1 cut(s) 459
Eco88I CYCGRG 4 cut(s) 29, 203, 817, 1027
Eco91I GGTNACC 1 cut(s) 625
EcoICRI GAGCTC 2 cut(s) 568, 721
EcoO65I GGTNACC 1 cut(s) 625
EcoRII CCWGG 2 cut(s) 756, 1103
EcoT14I CCWWGG 2 cut(s) 366, 906
EcoT22I ATGCAT 1 cut(s) 185
EcoT38I GRGCYC 3 cut(s) 498, 570, 723
EgeI GGCGCC 2 cut(s) 58, 648
EheI GGCGCC 2 cut(s) 58, 648
ErhI CCWWGG 2 cut(s) 366, 906
Esp3I CGTCTC 1 cut(s) 1153
FaeI CATG 6 cut(s) 187, 370, 382, 427, 469, 910
FatI CATG 6 cut(s) 183, 366, 378, 423, 465, 906
FblI GTMKAC 3 cut(s) 76, 540, 735
FokI GGATG 4 cut(s) 74, 116, 192, 800
FriOI GRGCYC 3 cut(s) 498, 570, 723
FspBI CTAG 1 cut(s) 848
GlaI GCGC 5 cut(s) 35, 58, 85, 648, 1036
GsaI CCCAGC 1 cut(s) 876
GsuI CTGGAG 4 cut(s) 83, 707, 779, 1087
HaeII RGCGCY 3 cut(s) 37, 60, 650
HaeIII GGCC 8 cut(s) 24, 280, 323, 371, 822, 863, 905, 967
HgaI GACGC 2 cut(s) 595, 1026
HhaI GCGC 5 cut(s) 36, 59, 86, 649, 1037
Hin1I GRCGYC 3 cut(s) 57, 300, 647
Hin1II CATG 6 cut(s) 187, 370, 382, 427, 469, 910
Hin6I GCGC 5 cut(s) 34, 57, 84, 647, 1035
HinP1I GCGC 5 cut(s) 34, 57, 84, 647, 1035
HincII GTYRAC 2 cut(s) 541, 736
HindII GTYRAC 2 cut(s) 541, 736
HphI GGTGA 3 cut(s) 301, 619, 997
Hpy166II GTNNAC 6 cut(s) 6, 77, 541, 736, 789, 931
Hpy188I TCNGA 6 cut(s) 336, 394, 407, 439, 554, 700
Hpy188III TCNNGA 3 cut(s) 512, 1027, 1029
Hpy8I GTNNAC 6 cut(s) 6, 77, 541, 736, 789, 931
Hpy99I CGWCG 6 cut(s) 302, 545, 611, 713, 737, 1042
HpyAV CCTTC 2 cut(s) 444, 1140
HpyCH4III ACNGT 1 cut(s) 1164
HpyCH4IV ACGT 5 cut(s) 300, 543, 678, 828, 998
HpyCH4V TGCA 3 cut(s) 183, 375, 429
HpyF10VI GCNNNNNNNGC 2 cut(s) 65, 109
HpyF3I CTNAG 5 cut(s) 210, 219, 502, 686, 887
HpySE526I ACGT 5 cut(s) 300, 543, 678, 828, 998
Hsp92I GRCGYC 3 cut(s) 57, 300, 647
Hsp92II CATG 6 cut(s) 187, 370, 382, 427, 469, 910
HspAI GCGC 5 cut(s) 34, 57, 84, 647, 1035
KasI GGCGCC 2 cut(s) 56, 646
KspI CCGCGG 1 cut(s) 1064
Kzo9I GATC 2 cut(s) 960, 1023
LguI GCTCTTC 1 cut(s) 983
LmnI GCTCC 5 cut(s) 187, 314, 718, 726, 841
Lsp1109I GCAGC 2 cut(s) 124, 884
LweI GCATC 1 cut(s) 170
MaeI CTAG 1 cut(s) 848
MaeII ACGT 5 cut(s) 300, 543, 678, 828, 998
MaeIII GTNAC 4 cut(s) 307, 398, 625, 1092
MalI GATC 2 cut(s) 962, 1025
MbiI CCGCTC 2 cut(s) 190, 993
MboI GATC 2 cut(s) 960, 1023
MboII GAAGA 2 cut(s) 685, 1000
MhlI GDGCHC 3 cut(s) 498, 570, 723
MlsI TGGCCA 1 cut(s) 905
MluCI AATT 5 cut(s) 156, 250, 273, 453, 1072
MluNI TGGCCA 1 cut(s) 905
Mly113I GGCGCC 2 cut(s) 57, 647
MlyI GAGTC 9 cut(s) 402, 517, 519, 585, 689, 851, 875, 898, 1094
MmeI TCCRAC 4 cut(s) 359, 532, 723, 951
Mox20I TGGCCA 1 cut(s) 905
Mph1103I ATGCAT 1 cut(s) 185
MscI TGGCCA 1 cut(s) 905
MseI TTAA 1 cut(s) 1044
MslI CAYNNNNRTG 2 cut(s) 11, 455
Msp20I TGGCCA 1 cut(s) 905
MspA1I CMGCKG 2 cut(s) 354, 1063
MvaI CCWGG 2 cut(s) 758, 1105
MvnI CGCG 5 cut(s) 84, 606, 1022, 1037, 1063
MwoI GCNNNNNNNGC 2 cut(s) 65, 109
NarI GGCGCC 2 cut(s) 57, 647
NciI CCSGG 8 cut(s) 167, 623, 631, 818, 819, 878, 944, 1151
NcoI CCATGG 2 cut(s) 366, 906
NdeII GATC 2 cut(s) 960, 1023
NlaIII CATG 6 cut(s) 187, 370, 382, 427, 469, 910
NlaIV GGNNCC 5 cut(s) 58, 635, 648, 1059, 1148
NmeAIII GCCGAG 4 cut(s) 33, 623, 839, 889
NmuCI GTSAC 2 cut(s) 307, 625
NsiI ATGCAT 1 cut(s) 185
PaeR7I CTCGAG 2 cut(s) 29, 1027
PciSI GCTCTTC 1 cut(s) 983
PcsI WCGNNNNNNNCGW 4 cut(s) 303, 390, 965, 1034
PfeI GAWTC 4 cut(s) 261, 881, 914, 976
PfoI TCCNGGA 1 cut(s) 756
Ple19I CGATCG 1 cut(s) 963
PleI GAGTC 9 cut(s) 402, 516, 519, 585, 689, 851, 874, 897, 1094
PluTI GGCGCC 2 cut(s) 60, 650
PpsI GAGTC 9 cut(s) 402, 516, 519, 585, 689, 851, 874, 897, 1094
Psp124BI GAGCTC 2 cut(s) 570, 723
Psp6I CCWGG 2 cut(s) 756, 1103
PspEI GGTNACC 1 cut(s) 625
PspFI CCCAGC 1 cut(s) 872
PspGI CCWGG 2 cut(s) 756, 1103
PspN4I GGNNCC 5 cut(s) 58, 635, 648, 1059, 1148
PspPI GGNCC 5 cut(s) 279, 322, 820, 965, 1146
PspXI VCTCGAGB 1 cut(s) 29
PsrI GAACNNNNNNTAC 2 cut(s) 455, 487
PvuI CGATCG 1 cut(s) 963
RsaI GTAC 4 cut(s) 5, 286, 383, 788
RsaNI GTAC 4 cut(s) 4, 285, 382, 787
RseI CAYNNNNRTG 2 cut(s) 11, 455
SacI GAGCTC 2 cut(s) 570, 723
SacII CCGCGG 1 cut(s) 1064
SalI GTCGAC 2 cut(s) 539, 734
SapI GCTCTTC 1 cut(s) 983
SaqAI TTAA 1 cut(s) 1044
Sau3AI GATC 2 cut(s) 960, 1023
Sau96I GGNCC 5 cut(s) 279, 322, 820, 965, 1146
SchI GAGTC 9 cut(s) 402, 517, 519, 585, 689, 851, 875, 898, 1094
SduI GDGCHC 3 cut(s) 498, 570, 723
SfaNI GCATC 1 cut(s) 170
SfcI CTRYAG 1 cut(s) 349
SfoI GGCGCC 2 cut(s) 58, 648
Sfr274I CTCGAG 2 cut(s) 29, 1027
Sfr303I CCGCGG 1 cut(s) 1064
SgrBI CCGCGG 1 cut(s) 1064
SinI GGWCC 1 cut(s) 1146
SlaI CTCGAG 2 cut(s) 29, 1027
SmaI CCCGGG 1 cut(s) 819
SmiMI CAYNNNNRTG 2 cut(s) 11, 455
SmlI CTYRAG 2 cut(s) 29, 1027
SmoI CTYRAG 2 cut(s) 29, 1027
Sse9I AATT 5 cut(s) 156, 250, 273, 453, 1072
SspDI GGCGCC 2 cut(s) 56, 646
SspMI CTAG 1 cut(s) 848
SstI GAGCTC 2 cut(s) 570, 723
StyI CCWWGG 2 cut(s) 366, 906
TaaI ACNGT 1 cut(s) 1164
TaiI ACGT 5 cut(s) 303, 546, 681, 831, 1001
TaqI TCGA 9 cut(s) 30, 297, 477, 540, 735, 959, 1002, 1028, 1040
TaqII GACCGA 1 cut(s) 722
TasI AATT 5 cut(s) 156, 250, 273, 453, 1072
TatI WGTACW 3 cut(s) 3, 284, 786
TauI GCSGC 8 cut(s) 125, 243, 357, 360, 652, 670, 996, 1063
TfiI GAWTC 4 cut(s) 261, 881, 914, 976
Tru1I TTAA 1 cut(s) 1044
Tru9I TTAA 1 cut(s) 1044
TscAI CASTG 3 cut(s) 510, 899, 944
TseFI GTSAC 2 cut(s) 307, 625
TseI GCWGC 2 cut(s) 112, 897
Tsp45I GTSAC 2 cut(s) 307, 625
TspDTI ATGAA 1 cut(s) 435
TspMI CCCGGG 1 cut(s) 817
TspRI CASTG 3 cut(s) 510, 899, 944
VpaK11BI GGWCC 1 cut(s) 1146
XapI RAATTY 2 cut(s) 273, 1072
XcmI CCANNNNNNNNNTGG 1 cut(s) 754
XhoI CTCGAG 2 cut(s) 29, 1027
XmaI CCCGGG 1 cut(s) 817
XmiI GTMKAC 3 cut(s) 76, 540, 735
XspI CTAG 1 cut(s) 848
ZraI GACGTC 1 cut(s) 301
Zsp2I ATGCAT 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.