Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011493

Physical Location & Seq

Genomic Coordinates Reverse (-)

6791104 .. 6792978

Gene Structure 1875 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G15570.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 522 bp

ATGGCGATTTCTTCTTCTTCCTCCTCTATATGTTTCAACCCCACTCGATTTCACACAGCTCGACATATTTCATCTCCGTCGCGTCTCTTCCCAGTCACCAGCTTCTCCCCTCGCTCTCTCCGTTTCTCCGACAGACGATCTCTCCTATCTTCCTCCGCCTCTCGCCTCCGTCTTTCTCCTCTATGCGTTCGTGATTCTCGAGCAGCTGAAGTTACACAACGATCATGGGAAGACTCAGTTCTAAAAAGCGAAACCCCGGTGTTAGTAGAATTCTACACGAGTTGGTGCGGTCCATGTCGGATGGTCCACAGGATAATAGACGAAATAGCAGGGGACTATGCTGGAAAACTAAACTGCTATCTCCTTAATGCAGACAATGACTTGCCGGTGGCTGAAGAGTACGAGATAAAGGCTGTGCCGGTAGTTCTGCTCTTCAAGAACGGGGAGAAACGAGAGTCAATCATGGGTACAATGCCTAAAGAGTTCTATATTTCCGCCATTGAAAGAGTCTTGAACTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009636 GO:0009987 GO:0010496 GO:0010497 GO:0010646 GO:0010647 GO:0015035 GO:0015036 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0016671 GO:0019725 GO:0033554 GO:0034599 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045454 GO:0047134 GO:0048509 GO:0048518 GO:0048522 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0097237 GO:0098754 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko04621 ko05418 map04621 map05418

Pfam Domains

Protein Families

Thioredoxin

Protein Analysis

173

Amino Acids

19.5

Weight (kDa)

8.65

Isoelectric Point (pI)

68.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Thioredoxin	PF00085	70 - 168	4.7e-22	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15570 AT2G15570
fragaria_vesca	FvH4_2g05860
malus_domestica	MD05G1082500.v1.1
prunus_persica	Prupe.8G126900_v2.0.a1
pyrus_communis	pycom05g07730
rosa_chinensis	RchiOBHm_Chr6g0257721
rosa_laevigata	RLG00000014718
rosa_multiflora	Rmu_co8430713.1_g000001 Rmu_sc0002079.1_g000028 Rmu_sc0006683.1_g000008 Rmu_sc0011315.1_g000005
rosa_roxburghii	Rroxscaffold_7G00208900
rosa_rugosa	Rorug05G0568800
rosa_samantha	Rh1DG167100 Rh6AG085600 Rh6BG079900 Rh6CG074900 Rh6DG071800
rosa_wichuraiana	Rw6G007680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	82
AciI	CCGC	3 cut(s)	156, 288, 495
AcsI	RAATTY	1 cut(s)	269
AcuI	CTGAAG	2 cut(s)	228, 414
AfaI	GTAC	2 cut(s)	401, 469
AgsI	TTSAA	4 cut(s)	37, 436, 503, 514
AluBI	AGCT	3 cut(s)	59, 102, 206
AluI	AGCT	3 cut(s)	59, 102, 206
Alw26I	GTCTC	1 cut(s)	89
Ama87I	CYCGRG	1 cut(s)	198
ApeKI	GCWGC	1 cut(s)	203
ApoI	RAATTY	1 cut(s)	269
AspS9I	GGNCC	2 cut(s)	290, 304
AsuC2I	CCSGG	1 cut(s)	257
AsuHPI	GGTGA	1 cut(s)	88
AvaI	CYCGRG	1 cut(s)	198
AvaII	GGWCC	2 cut(s)	290, 304
BauI	CACGAG	1 cut(s)	277
BbsI	GAAGAC	1 cut(s)	237
BbvI	GCAGC	1 cut(s)	215
BccI	CCATC	1 cut(s)	295
BcnI	CCSGG	1 cut(s)	257
BcoDI	GTCTC	1 cut(s)	89
BisI	GCNGC	1 cut(s)	204
BlsI	GCNGC	1 cut(s)	205
Bme1390I	CCNGG	1 cut(s)	257
Bme18I	GGWCC	2 cut(s)	290, 304
BmeT110I	CYCGRG	1 cut(s)	198
BmgT120I	GGNCC	2 cut(s)	290, 304
BmrFI	CCNGG	1 cut(s)	257
BmrI	ACTGGG	1 cut(s)	86
BmuI	ACTGGG	1 cut(s)	86
BpiI	GAAGAC	1 cut(s)	237
BpuMI	CCSGG	1 cut(s)	257
BsaJI	CCNNGG	1 cut(s)	255
BsaXI	ACNNNNNCTCC	2 cut(s)	126, 156
Bse118I	RCCGGY	2 cut(s)	385, 418
Bse1I	ACTGG	1 cut(s)	92
BseDI	CCNNGG	1 cut(s)	255
BseGI	GGATG	1 cut(s)	306
BseMII	CTCAG	1 cut(s)	249
BseNI	ACTGG	1 cut(s)	92
BseRI	GAGGAG	2 cut(s)	13, 168
BseXI	GCAGC	1 cut(s)	215
Bsh1236I	CGCG	1 cut(s)	82
BsiHKCI	CYCGRG	1 cut(s)	198
BsiSI	CCGG	3 cut(s)	257, 386, 419
BslFI	GGGAC	1 cut(s)	347
BsmAI	GTCTC	1 cut(s)	89
BsmBI	CGTCTC	1 cut(s)	89
BsmFI	GGGAC	1 cut(s)	347
BsoBI	CYCGRG	1 cut(s)	198
Bsp143I	GATC	2 cut(s)	137, 221
BspACI	CCGC	3 cut(s)	156, 288, 495
BspCNI	CTCAG	1 cut(s)	248
BspFNI	CGCG	1 cut(s)	82
BspHI	TCATGA	1 cut(s)	518
BspQI	GCTCTTC	1 cut(s)	437
BsrFI	RCCGGY	2 cut(s)	385, 418
BsrI	ACTGG	1 cut(s)	92
BssAI	RCCGGY	2 cut(s)	385, 418
BssECI	CCNNGG	1 cut(s)	255
BssMI	GATC	2 cut(s)	137, 221
BssSI	CACGAG	1 cut(s)	277
Bst2BI	CACGAG	1 cut(s)	277
Bst6I	CTCTTC	3 cut(s)	92, 390, 437
BstDEI	CTNAG	1 cut(s)	235
BstF5I	GGATG	1 cut(s)	306
BstFNI	CGCG	1 cut(s)	82
BstKTI	GATC	2 cut(s)	140, 224
BstMAI	GTCTC	1 cut(s)	89
BstMBI	GATC	2 cut(s)	137, 221
BstSCI	CCNGG	1 cut(s)	255
BstUI	CGCG	1 cut(s)	82
BstV1I	GCAGC	1 cut(s)	215
BstV2I	GAAGAC	1 cut(s)	237
BtsCI	GGATG	1 cut(s)	306
CciI	TCATGA	1 cut(s)	518
Cfr10I	RCCGGY	2 cut(s)	385, 418
Cfr13I	GGNCC	2 cut(s)	290, 304
CseI	GACGC	1 cut(s)	71
Csp6I	GTAC	2 cut(s)	400, 468
CviAII	CATG	4 cut(s)	225, 294, 463, 519
CviJI	RGCY	5 cut(s)	59, 102, 206, 392, 413
CviKI_1	RGCY	5 cut(s)	59, 102, 206, 392, 413
CviQI	GTAC	2 cut(s)	400, 468
DdeI	CTNAG	1 cut(s)	235
DpnI	GATC	2 cut(s)	139, 223
DpnII	GATC	2 cut(s)	137, 221
Eam1104I	CTCTTC	3 cut(s)	92, 390, 437
EarI	CTCTTC	3 cut(s)	92, 390, 437
EciI	GGCGGA	2 cut(s)	145, 484
Eco47I	GGWCC	2 cut(s)	290, 304
Eco57I	CTGAAG	2 cut(s)	228, 414
Eco88I	CYCGRG	1 cut(s)	198
EcoRI	GAATTC	1 cut(s)	269
Esp3I	CGTCTC	1 cut(s)	89
FaeI	CATG	4 cut(s)	228, 297, 466, 522
FaqI	GGGAC	1 cut(s)	347
FatI	CATG	4 cut(s)	224, 293, 462, 518
Fnu4HI	GCNGC	1 cut(s)	204
FokI	GGATG	1 cut(s)	313
Fsp4HI	GCNGC	1 cut(s)	204
GluI	GCNGC	1 cut(s)	204
HapII	CCGG	3 cut(s)	257, 386, 419
HgaI	GACGC	1 cut(s)	71
Hin1II	CATG	4 cut(s)	228, 297, 466, 522
HinfI	GANTC	4 cut(s)	194, 233, 455, 507
HpaII	CCGG	3 cut(s)	257, 386, 419
HphI	GGTGA	1 cut(s)	88
Hpy166II	GTNNAC	1 cut(s)	307
Hpy188I	TCNGA	2 cut(s)	130, 300
Hpy188III	TCNNGA	5 cut(s)	191, 198, 436, 511, 519
Hpy8I	GTNNAC	1 cut(s)	307
Hpy99I	CGWCG	1 cut(s)	82
HpyCH4V	TGCA	1 cut(s)	371
HpyF3I	CTNAG	1 cut(s)	235
Hsp92II	CATG	4 cut(s)	228, 297, 466, 522
Kzo9I	GATC	2 cut(s)	137, 221
LguI	GCTCTTC	1 cut(s)	437
LpnPI	CCDG	8 cut(s)	105, 112, 270, 295, 315, 327, 399, 432
Lsp1109I	GCAGC	1 cut(s)	215
MaeIII	GTNAC	2 cut(s)	94, 211
MalI	GATC	2 cut(s)	139, 223
MboI	GATC	2 cut(s)	137, 221
MboII	GAAGA	8 cut(s)	3, 6, 9, 79, 141, 242, 407, 424
MluCI	AATT	1 cut(s)	269
MlyI	GAGTC	3 cut(s)	227, 464, 516
MmeI	TCCRAC	2 cut(s)	153, 278
MnlI	CCTC	7 cut(s)	31, 34, 120, 163, 169, 176, 189
MseI	TTAA	1 cut(s)	366
MspA1I	CMGCKG	1 cut(s)	206
MspI	CCGG	3 cut(s)	257, 386, 419
MspR9I	CCNGG	1 cut(s)	257
MvnI	CGCG	1 cut(s)	82
NciI	CCSGG	1 cut(s)	257
NdeII	GATC	2 cut(s)	137, 221
NlaIII	CATG	4 cut(s)	228, 297, 466, 522
NmuCI	GTSAC	1 cut(s)	94
PaeR7I	CTCGAG	1 cut(s)	198
PagI	TCATGA	1 cut(s)	518
PciSI	GCTCTTC	1 cut(s)	437
PcsI	WCGNNNNNNNCGW	2 cut(s)	118, 196
PfeI	GAWTC	1 cut(s)	194
PkrI	GCNGC	1 cut(s)	205
PleI	GAGTC	3 cut(s)	227, 463, 515
PpsI	GAGTC	3 cut(s)	227, 463, 515
PspPI	GGNCC	2 cut(s)	290, 304
PvuII	CAGCTG	1 cut(s)	206
RsaI	GTAC	2 cut(s)	401, 469
RsaNI	GTAC	2 cut(s)	400, 468
SapI	GCTCTTC	1 cut(s)	437
SaqAI	TTAA	1 cut(s)	366
SatI	GCNGC	1 cut(s)	204
Sau3AI	GATC	2 cut(s)	137, 221
Sau96I	GGNCC	2 cut(s)	290, 304
SchI	GAGTC	3 cut(s)	227, 464, 516
ScrFI	CCNGG	1 cut(s)	257
SetI	ASST	3 cut(s)	61, 104, 208
Sfr274I	CTCGAG	1 cut(s)	198
SinI	GGWCC	2 cut(s)	290, 304
SlaI	CTCGAG	1 cut(s)	198
SmlI	CTYRAG	1 cut(s)	198
SmoI	CTYRAG	1 cut(s)	198
Sse9I	AATT	1 cut(s)	269
SsiI	CCGC	3 cut(s)	156, 288, 495
StyD4I	CCNGG	1 cut(s)	255
TaqI	TCGA	3 cut(s)	46, 61, 199
TasI	AATT	1 cut(s)	269
TfiI	GAWTC	1 cut(s)	194
Tru1I	TTAA	1 cut(s)	366
Tru9I	TTAA	1 cut(s)	366
TseFI	GTSAC	1 cut(s)	94
TseI	GCWGC	1 cut(s)	203
Tsp45I	GTSAC	1 cut(s)	94
TspDTI	ATGAA	1 cut(s)	60
TspGWI	ACGGA	3 cut(s)	66, 110, 158
VpaK11BI	GGWCC	2 cut(s)	290, 304
XapI	RAATTY	1 cut(s)	269
XhoI	CTCGAG	1 cut(s)	198

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.