Rh1DG167100

Thioredoxin M3

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Forward (+)
34313406 .. 34313739
334 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG167100.1

Sequence Viewer

Length: 237 bp
ATGGTTAGGATTGGGATTGTCCACTGCGTGATTGATGAAATTGAAATTGAGTATGCTGGCAAGCTCAAGTGCTTTGTGCTCAACGCATATGTTGATTTGCAGATTGCCGAGGACTATGATATTAAGGCTGTGCCTGTGGTTTTGCTGTTTAAGAATGGGAAGAATTGTGACACAGCGTTTGGTACCATGCCAAAGGAGTTCTATGTTGCTGCCATTGAGAGGGTCCTGACGCCGTAA

Protein Analysis

78

Amino Acids

8.77

Weight (kDa)

4.94

Isoelectric Point (pI)

43.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 182
AccB1I GGYRCC 1 cut(s) 182
AcyI GRCGYC 1 cut(s) 230
AdeI CACNNNGTG 1 cut(s) 28
AfaI GTAC 1 cut(s) 184
AfiI CCNNNNNNNGG 1 cut(s) 219
AgsI TTSAA 1 cut(s) 44
AluBI AGCT 1 cut(s) 64
AluI AGCT 1 cut(s) 64
Alw21I GWGCWC 1 cut(s) 81
ApeKI GCWGC 1 cut(s) 209
ArsI GACNNNNNNTTYG 2 cut(s) 161, 193
Asp718I GGTACC 1 cut(s) 182
AspS9I GGNCC 1 cut(s) 223
AvaII GGWCC 1 cut(s) 223
BanI GGYRCC 1 cut(s) 182
Bbv12I GWGCWC 1 cut(s) 81
BbvI GCAGC 1 cut(s) 196
BceAI ACGGC 1 cut(s) 217
BisI GCNGC 1 cut(s) 210
BlsI GCNGC 1 cut(s) 211
Bme18I GGWCC 1 cut(s) 223
BmgT120I GGNCC 1 cut(s) 223
BmiI GGNNCC 2 cut(s) 184, 224
BpuEI CTTGAG 1 cut(s) 50
BsaHI GRCGYC 1 cut(s) 230
BsaJI CCNNGG 1 cut(s) 108
Bsc4I CCNNNNNNNGG 1 cut(s) 219
BseDI CCNNGG 1 cut(s) 108
BseLI CCNNNNNNNGG 1 cut(s) 219
BseXI GCAGC 1 cut(s) 196
BshNI GGYRCC 1 cut(s) 182
BsiHKAI GWGCWC 1 cut(s) 81
BslI CCNNNNNNNGG 1 cut(s) 219
Bsp1286I GDGCHC 1 cut(s) 81
BspLI GGNNCC 2 cut(s) 184, 224
BspT107I GGYRCC 1 cut(s) 182
BssECI CCNNGG 1 cut(s) 108
BssNI GRCGYC 1 cut(s) 230
BstACI GRCGYC 1 cut(s) 230
BstC8I GCNNGC 2 cut(s) 58, 62
BstV1I GCAGC 1 cut(s) 196
BtsI GCAGTG 1 cut(s) 22
BtsIMutI CAGTG 1 cut(s) 22
Cac8I GCNNGC 2 cut(s) 58, 62
Cfr13I GGNCC 1 cut(s) 223
Csp6I GTAC 1 cut(s) 183
CviAII CATG 1 cut(s) 187
CviJI RGCY 2 cut(s) 64, 128
CviKI_1 RGCY 2 cut(s) 64, 128
CviQI GTAC 1 cut(s) 183
DraIII CACNNNGTG 1 cut(s) 28
Eco47I GGWCC 1 cut(s) 223
EcoO109I RGGNCCY 1 cut(s) 223
FaeI CATG 1 cut(s) 190
FaiI YATR 6 cut(s) 54, 88, 90, 117, 188, 204
FatI CATG 1 cut(s) 186
FauNDI CATATG 1 cut(s) 88
Fnu4HI GCNGC 1 cut(s) 210
Fsp4HI GCNGC 1 cut(s) 210
GluI GCNGC 1 cut(s) 210
Hin1I GRCGYC 1 cut(s) 230
Hin1II CATG 1 cut(s) 190
Hpy166II GTNNAC 1 cut(s) 22
Hpy188III TCNNGA 1 cut(s) 226
Hpy8I GTNNAC 1 cut(s) 22
HpyCH4V TGCA 1 cut(s) 100
Hsp92I GRCGYC 1 cut(s) 230
Hsp92II CATG 1 cut(s) 190
KpnI GGTACC 1 cut(s) 186
LpnPI CCDG 2 cut(s) 42, 147
Lsp1109I GCAGC 1 cut(s) 196
MaeIII GTNAC 1 cut(s) 167
MboII GAAGA 1 cut(s) 172
MhlI GDGCHC 1 cut(s) 81
MluCI AATT 3 cut(s) 39, 45, 163
MnlI CCTC 2 cut(s) 103, 213
MseI TTAA 2 cut(s) 123, 150
NdeI CATATG 1 cut(s) 88
NlaIII CATG 1 cut(s) 190
NlaIV GGNNCC 2 cut(s) 184, 224
NmeAIII GCCGAG 1 cut(s) 133
NmuCI GTSAC 1 cut(s) 167
PkrI GCNGC 1 cut(s) 211
PpuMI RGGWCCY 1 cut(s) 223
Psp5II RGGWCCY 1 cut(s) 223
PspN4I GGNNCC 2 cut(s) 184, 224
PspPI GGNCC 1 cut(s) 223
PspPPI RGGWCCY 1 cut(s) 223
RsaI GTAC 1 cut(s) 184
RsaNI GTAC 1 cut(s) 183
SaqAI TTAA 2 cut(s) 123, 150
SatI GCNGC 1 cut(s) 210
Sau96I GGNCC 1 cut(s) 223
SduI GDGCHC 1 cut(s) 81
SetI ASST 1 cut(s) 66
SgeI CNNG 7 cut(s) 40, 69, 73, 79, 121, 146, 199
SinI GGWCC 1 cut(s) 223
SmlI CTYRAG 1 cut(s) 65
SmoI CTYRAG 1 cut(s) 65
Sse9I AATT 3 cut(s) 39, 45, 163
TasI AATT 3 cut(s) 39, 45, 163
Tru1I TTAA 2 cut(s) 123, 150
Tru9I TTAA 2 cut(s) 123, 150
TscAI CASTG 1 cut(s) 29
TseFI GTSAC 1 cut(s) 167
TseI GCWGC 1 cut(s) 209
Tsp45I GTSAC 1 cut(s) 167
TspDTI ATGAA 1 cut(s) 51
TspRI CASTG 1 cut(s) 29
VpaK11BI GGWCC 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.