Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015783

Physical Location & Seq

Genomic Coordinates Reverse (-)

7487646 .. 7490199

Gene Structure 2554 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G17220.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1245 bp

ATGGGTCTTTGTTGGGGATCTCCATCTGATTCTCCTCCAACAACAACACCTTCCTCTACTGGTAACATCAGTTCAGTAGGGACTTTTAAGTCATCAAACAACACGACGACTACAGGAACATCAAGGGGAAGTAACATATCTAGCAATAGTGGGTTCTCTGTGGCAAGTGGTGAAGATGCTTACCCCGATGGTCAGATACTTCCCATTCCGAATTTGAGGATATTCAGCTTAGCAGAACTTAGAGCTTCAACAAGGAATTTCAGGTCTGAGAATGTTCTTGGAGAGGGAGGATTTGGGAAAGTCTTTAAAGGCTGGCTTGAAGACAAGACTCCAGGGAAACAAAGCAACGGAACTGTGATTGCTGTTAAGAAACTGAATGCAGAAAGCTTCCAAGGATTCGAAGAATGGCAATGTGAAGTGAATTTTCTTGGGAGGGTTTCTCATCCAAACCTCGTGAAGCTGTTGGGATACTGCTTGGAAGGTGAAGAGTTGCTTCTTGTGTATGAGTATATGCAAAAAGGGAGCTTAGAGAATCATCTCTTCCGAAAGGGGTCTGCCGTTCAGCCACTCTCATGGGAGATAAGGCTTAAGATTGCAATAGGAGCAGCTAAAGGCTTAGCATTCTTACACGCTTCAGAGAAGCAAGTAATTTATCGAGACTTCAAAGCGTCAAACATTCTACTTGATGGGTCATATAACGCAAAGATATCAGATTTTGGATTGGCGAAATTAGGACCTTCCGCTAGTCAATCTCACATCACAACACGGGTTATGGGTACACACGGTTACGCAGCTCCAGAGTATGTTGCTACAGGTCACTTGTATGTAAAGAGCGATGTTTACGGGTTTGGCGTTGTTTTGGCTGAGATCTTAACTGGTTTACATGCGCTTGATCCTACTCGTCCTACCGGGCAACACAATCTAACCGAATGGATCAAACCTCATCTATCCGAAAGAAGAAAGCTAAGAAGCATAATGGACCCTCGTCTAGAAGGAAAATACCCTTTCAAATCTGCTTTCCGAGTAGCTCAACTGGCTCTGAAATGCCTTGGACCCGAACCCAAAAACCGTCCATCGATGAAAGAAGTGGTGGAATCGCTCGAACTCATCGAAGCTGCCAATGAGAAACCGTTAGAACGAAGGACCACTAGAGCTTCCCCATCCATCCGTCAACAACAAGGCCATTATCGCCCGCAACAACTCTCTTCGTTTCGTCCTAGACAAAACGTGTCTCGAGCTCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

414

Amino Acids

45.55

Weight (kDa)

9.44

Isoelectric Point (pI)

42.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	87 - 364	1.4e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	89 - 366	9.5e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17220 AT2G17220
fragaria_vesca	FvH4_2g16680
malus_domestica	MD05G1135000.v1.1 MD10G1140500.v1.1
prunus_persica	Prupe.8G178900_v2.0.a1
pyrus_communis	pycom05g13160 pycom10g11910
rosa_chinensis	RchiOBHm_Chr6g0280821
rosa_multiflora	Rmu_co8480431.1_g000001
rosa_roxburghii	Rroxscaffold_7G00187600
rosa_rugosa	Rorug06G0134700
rosa_samantha	Rh6BG249600 Rh6DG242400
rosa_wichuraiana	Rw6G021440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	88
AciI	CCGC	2 cut(s)	741, 1193
AclWI	GGATC	3 cut(s)	25, 887, 941
AcsI	RAATTY	3 cut(s)	211, 256, 421
AcuI	CTGAAG	1 cut(s)	618
AfaI	GTAC	1 cut(s)	778
AflII	CTTAAG	1 cut(s)	587
AflIII	ACRYGT	1 cut(s)	1227
AgsI	TTSAA	4 cut(s)	249, 320, 664, 1009
AjnI	CCWGG	1 cut(s)	331
Alw21I	GWGCWC	1 cut(s)	1240
Alw26I	GTCTC	2 cut(s)	651, 1236
AlwI	GGATC	3 cut(s)	25, 887, 941
Ama87I	CYCGRG	1 cut(s)	1233
AoxI	GGCC	1 cut(s)	1180
ApeKI	GCWGC	3 cut(s)	605, 791, 1115
ApoI	RAATTY	3 cut(s)	211, 256, 421
AspLEI	GCGC	1 cut(s)	889
AspS9I	GGNCC	4 cut(s)	734, 979, 1052, 1143
AsuC2I	CCSGG	1 cut(s)	910
AsuHPI	GGTGA	2 cut(s)	182, 494
AsuII	TTCGAA	1 cut(s)	399
AvaI	CYCGRG	1 cut(s)	1233
AvaII	GGWCC	4 cut(s)	734, 979, 1052, 1143
BanII	GRGCYC	1 cut(s)	1240
BauI	CACGAG	1 cut(s)	452
BbsI	GAAGAC	1 cut(s)	327
Bbv12I	GWGCWC	1 cut(s)	1240
BbvI	GCAGC	3 cut(s)	617, 803, 1102
BccI	CCATC	6 cut(s)	31, 182, 680, 1081, 1168, 1172
BceAI	ACGGC	1 cut(s)	542
BciT130I	CCWGG	1 cut(s)	333
BciVI	GTATCC	1 cut(s)	461
BcnI	CCSGG	1 cut(s)	910
BcoDI	GTCTC	2 cut(s)	651, 1236
BfaI	CTAG	6 cut(s)	141, 744, 989, 1149, 1218, 1243
BfmI	CTRYAG	2 cut(s)	111, 810
BfrI	CTTAAG	1 cut(s)	587
BfuI	GTATCC	1 cut(s)	461
BglII	AGATCT	1 cut(s)	867
BisI	GCNGC	3 cut(s)	606, 792, 1116
BlpI	GCTNAGC	2 cut(s)	229, 616
BlsI	GCNGC	3 cut(s)	607, 793, 1117
Bme1390I	CCNGG	2 cut(s)	333, 910
Bme18I	GGWCC	4 cut(s)	734, 979, 1052, 1143
BmeT110I	CYCGRG	1 cut(s)	1233
BmgT120I	GGNCC	4 cut(s)	734, 979, 1052, 1143
BmiI	GGNNCC	2 cut(s)	981, 1054
BmrFI	CCNGG	2 cut(s)	333, 910
BmsI	GCATC	1 cut(s)	166
BoxI	GACNNNNGTC	1 cut(s)	984
BpiI	GAAGAC	1 cut(s)	327
BplI	GAGNNNNNCTC	2 cut(s)	424, 456
BpmI	CTGGAG	2 cut(s)	315, 780
Bpu1102I	GCTNAGC	2 cut(s)	229, 616
Bpu14I	TTCGAA	1 cut(s)	399
BpuMI	CCSGG	1 cut(s)	910
Bsa29I	ATCGAT	1 cut(s)	1076
BsaBI	GATNNNNATC	1 cut(s)	22
BsaJI	CCNNGG	3 cut(s)	332, 391, 1048
Bse1I	ACTGG	3 cut(s)	64, 880, 1038
Bse3DI	GCAATG	1 cut(s)	416
Bse8I	GATNNNNATC	1 cut(s)	22
BseBI	CCWGG	1 cut(s)	333
BseCI	ATCGAT	1 cut(s)	1076
BseDI	CCNNGG	3 cut(s)	332, 391, 1048
BseGI	GGATG	3 cut(s)	442, 1160, 1164
BseJI	GATNNNNATC	1 cut(s)	22
BseMI	GCAATG	1 cut(s)	416
BseMII	CTCAG	2 cut(s)	258, 855
BseNI	ACTGG	3 cut(s)	64, 880, 1038
BseRI	GAGGAG	1 cut(s)	24
BseXI	GCAGC	3 cut(s)	617, 803, 1102
BshFI	GGCC	1 cut(s)	1182
BshVI	ATCGAT	1 cut(s)	1076
BsiHKAI	GWGCWC	1 cut(s)	1240
BsiHKCI	CYCGRG	1 cut(s)	1233
BsiSI	CCGG	1 cut(s)	909
BslFI	GGGAC	1 cut(s)	94
BsmAI	GTCTC	2 cut(s)	651, 1236
BsmFI	GGGAC	1 cut(s)	94
BsmI	GAATGC	2 cut(s)	382, 620
BsnI	GGCC	1 cut(s)	1182
BsoBI	CYCGRG	1 cut(s)	1233
Bsp119I	TTCGAA	1 cut(s)	399
Bsp1286I	GDGCHC	1 cut(s)	1240
Bsp143I	GATC	4 cut(s)	17, 867, 892, 933
Bsp1720I	GCTNAGC	2 cut(s)	229, 616
BspACI	CCGC	2 cut(s)	741, 1193
BspANI	GGCC	1 cut(s)	1182
BspCNI	CTCAG	2 cut(s)	259, 856
BspDI	ATCGAT	1 cut(s)	1076
BspLI	GGNNCC	2 cut(s)	981, 1054
BspPI	GGATC	3 cut(s)	25, 887, 941
BspT104I	TTCGAA	1 cut(s)	399
BspTI	CTTAAG	1 cut(s)	587
BsrDI	GCAATG	1 cut(s)	416
BsrI	ACTGG	3 cut(s)	64, 880, 1038
BssECI	CCNNGG	3 cut(s)	332, 391, 1048
BssMI	GATC	4 cut(s)	17, 867, 892, 933
BssSI	CACGAG	1 cut(s)	452
BssT1I	CCWWGG	2 cut(s)	391, 1048
Bst2BI	CACGAG	1 cut(s)	452
Bst2UI	CCWGG	1 cut(s)	333
Bst4CI	ACNGT	4 cut(s)	355, 785, 1070, 1131
Bst6I	CTCTTC	3 cut(s)	480, 545, 1210
BstAFI	CTTAAG	1 cut(s)	587
BstBI	TTCGAA	1 cut(s)	399
BstC8I	GCNNGC	2 cut(s)	314, 1193
BstDEI	CTNAG	7 cut(s)	229, 239, 267, 526, 616, 864, 965
BstF5I	GGATG	3 cut(s)	442, 1160, 1164
BstHHI	GCGC	1 cut(s)	889
BstKTI	GATC	4 cut(s)	20, 870, 895, 936
BstMAI	GTCTC	2 cut(s)	651, 1236
BstMBI	GATC	4 cut(s)	17, 867, 892, 933
BstMWI	GCNNNNNNNGC	3 cut(s)	602, 1034, 1188
BstNI	CCWGG	1 cut(s)	333
BstNSI	RCATGY	1 cut(s)	887
BstPAI	GACNNNNGTC	1 cut(s)	984
BstSCI	CCNGG	2 cut(s)	331, 908
BstSFI	CTRYAG	2 cut(s)	111, 810
BstV1I	GCAGC	3 cut(s)	617, 803, 1102
BstV2I	GAAGAC	1 cut(s)	327
BstX2I	RGATCY	2 cut(s)	17, 867
BstXI	CCANNNNNNTGG	1 cut(s)	573
BstYI	RGATCY	2 cut(s)	17, 867
Bsu15I	ATCGAT	1 cut(s)	1076
BsuI	GTATCC	1 cut(s)	461
BsuRI	GGCC	1 cut(s)	1182
BsuTUI	ATCGAT	1 cut(s)	1076
BtgZI	GCGATG	1 cut(s)	849
BtsCI	GGATG	3 cut(s)	442, 1160, 1164
Cac8I	GCNNGC	2 cut(s)	314, 1193
CfoI	GCGC	1 cut(s)	889
Cfr13I	GGNCC	4 cut(s)	734, 979, 1052, 1143
ClaI	ATCGAT	1 cut(s)	1076
CseI	GACGC	1 cut(s)	657
Csp6I	GTAC	1 cut(s)	777
CviAII	CATG	2 cut(s)	573, 884
CviQI	GTAC	1 cut(s)	777
DdeI	CTNAG	7 cut(s)	229, 239, 267, 526, 616, 864, 965
DpnI	GATC	4 cut(s)	19, 869, 894, 935
DpnII	GATC	4 cut(s)	17, 867, 892, 933
DraI	TTTAAA	1 cut(s)	307
DrdI	GACNNNNNNGTC	1 cut(s)	88
DseDI	GACNNNNNNGTC	1 cut(s)	88
Eam1104I	CTCTTC	3 cut(s)	480, 545, 1210
EarI	CTCTTC	3 cut(s)	480, 545, 1210
Ecl136II	GAGCTC	1 cut(s)	1238
Eco130I	CCWWGG	2 cut(s)	391, 1048
Eco24I	GRGCYC	1 cut(s)	1240
Eco32I	GATATC	1 cut(s)	708
Eco47I	GGWCC	4 cut(s)	734, 979, 1052, 1143
Eco53kI	GAGCTC	1 cut(s)	1238
Eco57I	CTGAAG	1 cut(s)	618
Eco88I	CYCGRG	1 cut(s)	1233
EcoICRI	GAGCTC	1 cut(s)	1238
EcoO109I	RGGNCCY	1 cut(s)	734
EcoRII	CCWGG	1 cut(s)	331
EcoRV	GATATC	1 cut(s)	708
EcoT14I	CCWWGG	2 cut(s)	391, 1048
EcoT38I	GRGCYC	1 cut(s)	1240
ErhI	CCWWGG	2 cut(s)	391, 1048
FaeI	CATG	2 cut(s)	576, 887
FalI	AAGNNNNNCTT	4 cut(s)	300, 332, 477, 509
FaqI	GGGAC	1 cut(s)	94
FatI	CATG	2 cut(s)	572, 883
FauI	CCCGC	1 cut(s)	1200
Fnu4HI	GCNGC	3 cut(s)	606, 792, 1116
FokI	GGATG	3 cut(s)	429, 1147, 1151
FriOI	GRGCYC	1 cut(s)	1240
Fsp4HI	GCNGC	3 cut(s)	606, 792, 1116
FspBI	CTAG	6 cut(s)	141, 744, 989, 1149, 1218, 1243
GlaI	GCGC	1 cut(s)	888
GluI	GCNGC	3 cut(s)	606, 792, 1116
GsuI	CTGGAG	2 cut(s)	315, 780
HaeIII	GGCC	1 cut(s)	1182
HapII	CCGG	1 cut(s)	909
HgaI	GACGC	1 cut(s)	657
HhaI	GCGC	1 cut(s)	889
Hin1II	CATG	2 cut(s)	576, 887
Hin6I	GCGC	1 cut(s)	887
HinP1I	GCGC	1 cut(s)	887
HincII	GTYRAC	1 cut(s)	1172
HindII	GTYRAC	1 cut(s)	1172
HindIII	AAGCTT	1 cut(s)	385
HinfI	GANTC	5 cut(s)	29, 328, 396, 532, 1094
HpaII	CCGG	1 cut(s)	909
HphI	GGTGA	2 cut(s)	182, 494
Hpy166II	GTNNAC	4 cut(s)	779, 841, 881, 1172
Hpy188III	TCNNGA	5 cut(s)	454, 656, 797, 989, 1233
Hpy8I	GTNNAC	4 cut(s)	779, 841, 881, 1172
Hpy99I	CGWCG	1 cut(s)	109
HpyAV	CCTTC	5 cut(s)	60, 473, 747, 986, 1134
HpyCH4III	ACNGT	4 cut(s)	355, 785, 1070, 1131
HpyCH4IV	ACGT	1 cut(s)	1227
HpyCH4V	TGCA	3 cut(s)	380, 514, 596
HpyF10VI	GCNNNNNNNGC	3 cut(s)	602, 1034, 1188
HpyF3I	CTNAG	7 cut(s)	229, 239, 267, 526, 616, 864, 965
HpySE526I	ACGT	1 cut(s)	1227
Hsp92II	CATG	2 cut(s)	576, 887
HspAI	GCGC	1 cut(s)	887
Kzo9I	GATC	4 cut(s)	17, 867, 892, 933
LmnI	GCTCC	3 cut(s)	522, 602, 799
Lsp1109I	GCAGC	3 cut(s)	617, 803, 1102
LweI	GCATC	1 cut(s)	166
MaeI	CTAG	6 cut(s)	141, 744, 989, 1149, 1218, 1243
MaeII	ACGT	1 cut(s)	1227
MaeIII	GTNAC	4 cut(s)	62, 131, 785, 815
MalI	GATC	4 cut(s)	19, 869, 894, 935
MboI	GATC	4 cut(s)	17, 867, 892, 933
MboII	GAAGA	7 cut(s)	185, 332, 413, 497, 532, 969, 1197
MflI	RGATCY	2 cut(s)	17, 867
MhlI	GDGCHC	1 cut(s)	1240
MluCI	AATT	5 cut(s)	211, 256, 421, 648, 728
MlyI	GAGTC	1 cut(s)	322
MmeI	TCCRAC	1 cut(s)	62
MnlI	CCTC	9 cut(s)	45, 64, 210, 277, 281, 426, 461, 951, 993
MseI	TTAA	5 cut(s)	87, 306, 366, 588, 872
MslI	CAYNNNNRTG	2 cut(s)	571, 822
MspCI	CTTAAG	1 cut(s)	587
MspI	CCGG	1 cut(s)	909
MspR9I	CCNGG	2 cut(s)	333, 910
Mva1269I	GAATGC	2 cut(s)	382, 620
MvaI	CCWGG	1 cut(s)	333
MwoI	GCNNNNNNNGC	3 cut(s)	602, 1034, 1188
NciI	CCSGG	1 cut(s)	910
NdeII	GATC	4 cut(s)	17, 867, 892, 933
NlaIII	CATG	2 cut(s)	576, 887
NlaIV	GGNNCC	2 cut(s)	981, 1054
NmuCI	GTSAC	1 cut(s)	815
NspI	RCATGY	1 cut(s)	887
NspV	TTCGAA	1 cut(s)	399
PaeR7I	CTCGAG	1 cut(s)	1233
PcsI	WCGNNNNNNNCGW	2 cut(s)	849, 1107
PctI	GAATGC	2 cut(s)	382, 620
PfeI	GAWTC	4 cut(s)	29, 396, 532, 1094
PkrI	GCNGC	3 cut(s)	607, 793, 1117
PleI	GAGTC	1 cut(s)	322
PpsI	GAGTC	1 cut(s)	322
PpuMI	RGGWCCY	1 cut(s)	734
PshAI	GACNNNNGTC	1 cut(s)	984
Psp124BI	GAGCTC	1 cut(s)	1240
Psp5II	RGGWCCY	1 cut(s)	734
Psp6I	CCWGG	1 cut(s)	331
PspGI	CCWGG	1 cut(s)	331
PspN4I	GGNNCC	2 cut(s)	981, 1054
PspPI	GGNCC	4 cut(s)	734, 979, 1052, 1143
PspPPI	RGGWCCY	1 cut(s)	734
PsrI	GAACNNNNNNTAC	2 cut(s)	55, 87
PsuI	RGATCY	2 cut(s)	17, 867
RsaI	GTAC	1 cut(s)	778
RsaNI	GTAC	1 cut(s)	777
RseI	CAYNNNNRTG	2 cut(s)	571, 822
SacI	GAGCTC	1 cut(s)	1240
SaqAI	TTAA	5 cut(s)	87, 306, 366, 588, 872
SatI	GCNGC	3 cut(s)	606, 792, 1116
Sau3AI	GATC	4 cut(s)	17, 867, 892, 933
Sau96I	GGNCC	4 cut(s)	734, 979, 1052, 1143
SchI	GAGTC	1 cut(s)	322
ScrFI	CCNGG	2 cut(s)	333, 910
SduI	GDGCHC	1 cut(s)	1240
SfaNI	GCATC	1 cut(s)	166
SfcI	CTRYAG	2 cut(s)	111, 810
Sfr274I	CTCGAG	1 cut(s)	1233
SfuI	TTCGAA	1 cut(s)	399
SinI	GGWCC	4 cut(s)	734, 979, 1052, 1143
SlaI	CTCGAG	1 cut(s)	1233
SmiMI	CAYNNNNRTG	2 cut(s)	571, 822
SmlI	CTYRAG	2 cut(s)	587, 1233
SmoI	CTYRAG	2 cut(s)	587, 1233
Sse9I	AATT	5 cut(s)	211, 256, 421, 648, 728
SsiI	CCGC	2 cut(s)	741, 1193
SspMI	CTAG	6 cut(s)	141, 744, 989, 1149, 1218, 1243
SstI	GAGCTC	1 cut(s)	1240
StyD4I	CCNGG	2 cut(s)	331, 908
StyI	CCWWGG	2 cut(s)	391, 1048
TaaI	ACNGT	4 cut(s)	355, 785, 1070, 1131
TaiI	ACGT	1 cut(s)	1230
TaqI	TCGA	6 cut(s)	399, 655, 1076, 1101, 1110, 1234
TasI	AATT	5 cut(s)	211, 256, 421, 648, 728
TfiI	GAWTC	4 cut(s)	29, 396, 532, 1094
Tru1I	TTAA	5 cut(s)	87, 306, 366, 588, 872
Tru9I	TTAA	5 cut(s)	87, 306, 366, 588, 872
TseFI	GTSAC	1 cut(s)	815
TseI	GCWGC	3 cut(s)	605, 791, 1115
Tsp45I	GTSAC	1 cut(s)	815
TspDTI	ATGAA	1 cut(s)	1094
TspGWI	ACGGA	2 cut(s)	363, 1157
Vha464I	CTTAAG	1 cut(s)	587
VpaK11BI	GGWCC	4 cut(s)	734, 979, 1052, 1143
XapI	RAATTY	3 cut(s)	211, 256, 421
XbaI	TCTAGA	1 cut(s)	988
XceI	RCATGY	1 cut(s)	887
XhoI	CTCGAG	1 cut(s)	1233
XspI	CTAG	6 cut(s)	141, 744, 989, 1149, 1218, 1243

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.