Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0015783

Physical Location & Seq

Genomic Coordinates Reverse (-)

18007142 .. 18011033

Gene Structure 3892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G178900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1251 bp

ATGGGGATTTGCTGGGGTTCTCCAGCTGAGAACCCAACGCCAGTAACTACTGGTGATCTCACTACAGGGGTCAGTAACATATCTCAGACAACCAGTAACACCACATCTTCAGGGGGGAGTGCTTTATCTCGGAATAGCCAGTTCTCGGCAGCAAGTGGCGATGAGGCCAGTCCACATGGGCAGATCTTACCCACCCCAAACTTGAGGATCTTCAGTTATTTAGAATTGAAGGCTGCAACCAGAAACTTCAGATCAGATACAGTTCTTGGGGAGGGAGGCTTTGGGATGGTCTTCAAAGGTTGGCTTGATGAAAAGGCACCAACCAAGTCTGGAAAAACCACAGTGATTGCTGTGAAAAAATTGAGTTCTGAGAGCTTGCAAGGGTTTGAGGAATGGCAGTCAGAGGTGAATTTCTTAGGGCGACTATCTCATCCTAATCTTGTAAAGCTGTTGGGATACTGTTTGGAGGACACGGAGCTGCTGCTCGTGTATGAGTTCATGCAAAAGGGTAGCTTGGAAAACCATCTATTTGGAAGGGGCTCAGCTGTTCAGCCACTTCCGTGGGATATACGGCTTAAAATTGCAATAGGAGCAGCTCGAGGCTTGGCTTTTTTGCATACATCAGAGAAGCAAGTAATCTATAGAGATTTCAAAGCTTCAAACATACTACTTGATGGGTCGTATATTGCCAAGATTTCCGACTTTGGCTTGGCAAAAATGGGCCCTTCAGCTAGTCAATCGCATGTGACAACACGAGTTATGGGTACATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGGCATTTGTATGTGAAGAGCGATGTGTATGGTTTTGGTGTTGTTCTGGTCGAGATATTGACAGGCTTGCGTGCACTTGATACAAATCGTCCGAGTGGGAAGCATAATTTAGTGGACTGGATAAAGCCATTCCTATCAGATAAAAGAAAATTGAAAGGAATTATGGACCCCCGGTTGGAGGGAAAATATCCTGCCAAAGCTGCATTCCGAATTTCTCAGCTTGCTCTAAAGTGCATTGAATCTGAACAGAAAAACCGGCCATCGATGAAGGATGTTGTGGAGACATTGGAACGGATTGAATCTGCCAATGAACATTCAAGGGAGCCTAGGCCCCGTTCAACTCATCCTATGGCTCATCGACAAGGCCAGAAGCCGCTGCATCATCGCTCGCCGCTTCACCCCAGGCTGGATGGGAATCAAACCTACCAACAGTCGCCTCGAGTGCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

417

Amino Acids

45.86

Weight (kDa)

9.41

Isoelectric Point (pI)

36.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17220 AT2G17220
fragaria_vesca	FvH4_2g16680
malus_domestica	MD05G1135000.v1.1 MD10G1140500.v1.1
prunus_persica	Prupe.8G178900_v2.0.a1
pyrus_communis	pycom05g13160 pycom10g11910
rosa_chinensis	RchiOBHm_Chr6g0280821
rosa_multiflora	Rmu_co8480431.1_g000001
rosa_roxburghii	Rroxscaffold_7G00187600
rosa_rugosa	Rorug06G0134700
rosa_samantha	Rh6BG249600 Rh6DG242400
rosa_wichuraiana	Rw6G021440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	316
AciI	CCGC	3 cut(s)	1175, 1193, 1246
AclWI	GGATC	1 cut(s)	215
AcoI	YGGCCR	1 cut(s)	1058
AcsI	RAATTY	2 cut(s)	409, 1011
AcuI	CTGAAG	4 cut(s)	93, 196, 232, 711
AfaI	GTAC	1 cut(s)	766
AfiI	CCNNNNNNNGG	4 cut(s)	145, 976, 979, 1207
AgsI	TTSAA	9 cut(s)	229, 295, 652, 660, 955, 1040, 1100, 1119, 1140
AjnI	CCWGG	1 cut(s)	1202
AjuI	GAANNNNNNNTTGG	2 cut(s)	989, 1021
AleI	CACNNNNGTG	1 cut(s)	559
Alw21I	GWGCWC	1 cut(s)	877
Alw26I	GTCTC	1 cut(s)	1076
Alw44I	GTGCAC	1 cut(s)	873
AlwI	GGATC	1 cut(s)	215
Ama87I	CYCGRG	2 cut(s)	597, 1239
AoxI	GGCC	5 cut(s)	165, 721, 1058, 1130, 1165
ApaI	GGGCCC	1 cut(s)	725
ApaLI	GTGCAC	1 cut(s)	873
ApeKI	GCWGC	8 cut(s)	149, 233, 478, 481, 593, 779, 1001, 1177
ApoI	RAATTY	2 cut(s)	409, 1011
AspA2I	CCTAGG	1 cut(s)	1127
AspS9I	GGNCC	4 cut(s)	721, 722, 967, 1131
AsuC2I	CCSGG	1 cut(s)	973
AsuHPI	GGTGA	3 cut(s)	65, 418, 1190
AvaI	CYCGRG	2 cut(s)	597, 1239
AvaII	GGWCC	1 cut(s)	967
AvrII	CCTAGG	1 cut(s)	1127
BaeGI	GKGCMC	2 cut(s)	725, 877
BanI	GGYRCC	1 cut(s)	316
BanII	GRGCYC	2 cut(s)	542, 725
BauI	CACGAG	2 cut(s)	485, 753
BbsI	GAAGAC	1 cut(s)	283
Bbv12I	GWGCWC	1 cut(s)	877
BbvI	GCAGC	8 cut(s)	161, 220, 465, 468, 605, 766, 988, 1164
BccI	CCATC	5 cut(s)	280, 531, 668, 1069, 1205
BceAI	ACGGC	1 cut(s)	587
BciT130I	CCWGG	1 cut(s)	1204
BciVI	GTATCC	1 cut(s)	449
BcnI	CCSGG	1 cut(s)	973
BcoDI	GTCTC	1 cut(s)	1076
BfaI	CTAG	2 cut(s)	732, 1128
BfmI	CTRYAG	2 cut(s)	63, 640
BfuI	GTATCC	1 cut(s)	449
BglII	AGATCT	1 cut(s)	183
BlnI	CCTAGG	1 cut(s)	1127
BlpI	GCTNAGC	1 cut(s)	541
Bme1390I	CCNGG	2 cut(s)	973, 1204
Bme18I	GGWCC	1 cut(s)	967
BmeT110I	CYCGRG	2 cut(s)	597, 1239
BmgT120I	GGNCC	4 cut(s)	721, 722, 967, 1131
BmiI	GGNNCC	5 cut(s)	318, 723, 969, 1125, 1133
BmrFI	CCNGG	2 cut(s)	973, 1204
BmsI	GCATC	1 cut(s)	1189
BpiI	GAAGAC	1 cut(s)	283
BpmI	CTGGAG	1 cut(s)	6
Bpu1102I	GCTNAGC	1 cut(s)	541
BpuEI	CTTGAG	1 cut(s)	223
BpuMI	CCSGG	1 cut(s)	973
Bsa29I	ATCGAT	1 cut(s)	1064
BsaBI	GATNNNNATC	2 cut(s)	885, 1215
BsaJI	CCNNGG	4 cut(s)	560, 971, 1127, 1202
Bsc4I	CCNNNNNNNGG	4 cut(s)	145, 976, 979, 1207
Bse118I	RCCGGY	1 cut(s)	1056
Bse1I	ACTGG	6 cut(s)	41, 55, 93, 139, 168, 923
Bse8I	GATNNNNATC	2 cut(s)	885, 1215
BseBI	CCWGG	1 cut(s)	1204
BseCI	ATCGAT	1 cut(s)	1064
BseDI	CCNNGG	4 cut(s)	560, 971, 1127, 1202
BseGI	GGATG	5 cut(s)	291, 430, 1078, 1144, 1216
BseJI	GATNNNNATC	2 cut(s)	885, 1215
BseLI	CCNNNNNNNGG	4 cut(s)	145, 976, 979, 1207
BseMII	CTCAG	6 cut(s)	18, 98, 360, 555, 777, 1031
BseNI	ACTGG	6 cut(s)	41, 55, 93, 139, 168, 923
BseSI	GKGCMC	2 cut(s)	725, 877
BseXI	GCAGC	8 cut(s)	161, 220, 465, 468, 605, 766, 988, 1164
BseYI	CCCAGC	1 cut(s)	12
BshFI	GGCC	5 cut(s)	167, 723, 1060, 1132, 1167
BshNI	GGYRCC	1 cut(s)	316
BshVI	ATCGAT	1 cut(s)	1064
BsiHKAI	GWGCWC	1 cut(s)	877
BsiHKCI	CYCGRG	2 cut(s)	597, 1239
BsiSI	CCGG	2 cut(s)	973, 1057
BslI	CCNNNNNNNGG	4 cut(s)	145, 976, 979, 1207
BsmAI	GTCTC	1 cut(s)	1076
BsmI	GAATGC	1 cut(s)	1004
BsnI	GGCC	5 cut(s)	167, 723, 1060, 1132, 1167
BsoBI	CYCGRG	2 cut(s)	597, 1239
Bsp120I	GGGCCC	1 cut(s)	721
Bsp1286I	GDGCHC	3 cut(s)	542, 725, 877
Bsp143I	GATC	4 cut(s)	55, 183, 207, 251
Bsp1720I	GCTNAGC	1 cut(s)	541
BspACI	CCGC	3 cut(s)	1175, 1193, 1246
BspANI	GGCC	5 cut(s)	167, 723, 1060, 1132, 1167
BspCNI	CTCAG	6 cut(s)	19, 97, 361, 554, 778, 1030
BspDI	ATCGAT	1 cut(s)	1064
BspLI	GGNNCC	5 cut(s)	318, 723, 969, 1125, 1133
BspPI	GGATC	1 cut(s)	215
BspQI	GCTCTTC	1 cut(s)	812
BspT107I	GGYRCC	1 cut(s)	316
BsrFI	RCCGGY	1 cut(s)	1056
BsrI	ACTGG	6 cut(s)	41, 55, 93, 139, 168, 923
BssAI	RCCGGY	1 cut(s)	1056
BssECI	CCNNGG	4 cut(s)	560, 971, 1127, 1202
BssMI	GATC	4 cut(s)	55, 183, 207, 251
BssSI	CACGAG	2 cut(s)	485, 753
BssT1I	CCWWGG	1 cut(s)	1127
Bst2BI	CACGAG	2 cut(s)	485, 753
Bst2UI	CCWGG	1 cut(s)	1204
Bst4CI	ACNGT	4 cut(s)	262, 343, 461, 1233
Bst6I	CTCTTC	1 cut(s)	812
BstC8I	GCNNGC	5 cut(s)	377, 869, 873, 1023, 1190
BstDEI	CTNAG	7 cut(s)	27, 84, 369, 415, 541, 786, 1017
BstDSI	CCRYGG	1 cut(s)	560
BstF5I	GGATG	5 cut(s)	291, 430, 1078, 1144, 1216
BstKTI	GATC	4 cut(s)	58, 186, 210, 254
BstMAI	GTCTC	1 cut(s)	1076
BstMBI	GATC	4 cut(s)	55, 183, 207, 251
BstMWI	GCNNNNNNNGC	3 cut(s)	590, 1001, 1243
BstNI	CCWGG	1 cut(s)	1204
BstNSI	RCATGY	1 cut(s)	746
BstSCI	CCNGG	2 cut(s)	971, 1202
BstSFI	CTRYAG	2 cut(s)	63, 640
BstSLI	GKGCMC	2 cut(s)	725, 877
BstV1I	GCAGC	8 cut(s)	161, 220, 465, 468, 605, 766, 988, 1164
BstV2I	GAAGAC	1 cut(s)	283
BstX2I	RGATCY	2 cut(s)	183, 207
BstXI	CCANNNNNNTGG	2 cut(s)	530, 561
BstYI	RGATCY	2 cut(s)	183, 207
Bsu15I	ATCGAT	1 cut(s)	1064
BsuI	GTATCC	1 cut(s)	449
BsuRI	GGCC	5 cut(s)	167, 723, 1060, 1132, 1167
BsuTUI	ATCGAT	1 cut(s)	1064
BtgI	CCRYGG	1 cut(s)	560
BtgZI	GCGATG	3 cut(s)	174, 837, 1169
BtsCI	GGATG	5 cut(s)	291, 430, 1078, 1144, 1216
BtsIMutI	CAGTG	1 cut(s)	348
Cac8I	GCNNGC	5 cut(s)	377, 869, 873, 1023, 1190
Cfr10I	RCCGGY	1 cut(s)	1056
Cfr13I	GGNCC	4 cut(s)	721, 722, 967, 1131
ClaI	ATCGAT	1 cut(s)	1064
Csp6I	GTAC	1 cut(s)	765
CspCI	CAANNNNNGTGG	2 cut(s)	328, 363
CviAII	CATG	3 cut(s)	176, 499, 743
CviQI	GTAC	1 cut(s)	765
DdeI	CTNAG	7 cut(s)	27, 84, 369, 415, 541, 786, 1017
DpnI	GATC	4 cut(s)	57, 185, 209, 253
DpnII	GATC	4 cut(s)	55, 183, 207, 251
EaeI	YGGCCR	1 cut(s)	1058
Eam1104I	CTCTTC	1 cut(s)	812
EarI	CTCTTC	1 cut(s)	812
Eco130I	CCWWGG	1 cut(s)	1127
Eco24I	GRGCYC	2 cut(s)	542, 725
Eco47I	GGWCC	1 cut(s)	967
Eco57I	CTGAAG	4 cut(s)	93, 196, 232, 711
Eco88I	CYCGRG	2 cut(s)	597, 1239
EcoO109I	RGGNCCY	2 cut(s)	722, 1131
EcoRII	CCWGG	1 cut(s)	1202
EcoT14I	CCWWGG	1 cut(s)	1127
EcoT38I	GRGCYC	2 cut(s)	542, 725
ErhI	CCWWGG	1 cut(s)	1127
FaeI	CATG	3 cut(s)	179, 502, 746
FalI	AAGNNNNNCTT	4 cut(s)	288, 320, 497, 529
FatI	CATG	3 cut(s)	175, 498, 742
FauNDI	CATATG	1 cut(s)	769
FokI	GGATG	5 cut(s)	298, 417, 1085, 1131, 1223
FriOI	GRGCYC	2 cut(s)	542, 725
FspBI	CTAG	2 cut(s)	732, 1128
GsaI	CCCAGC	1 cut(s)	16
GsuI	CTGGAG	1 cut(s)	6
HaeIII	GGCC	5 cut(s)	167, 723, 1060, 1132, 1167
HapII	CCGG	2 cut(s)	973, 1057
Hin1II	CATG	3 cut(s)	179, 502, 746
HindIII	AAGCTT	1 cut(s)	654
HinfI	GANTC	3 cut(s)	1040, 1100, 1216
HpaII	CCGG	2 cut(s)	973, 1057
HphI	GGTGA	3 cut(s)	65, 418, 1190
Hpy166II	GTNNAC	3 cut(s)	173, 875, 916
Hpy188III	TCNNGA	3 cut(s)	330, 785, 853
Hpy8I	GTNNAC	3 cut(s)	173, 875, 916
HpyAV	CCTTC	4 cut(s)	223, 528, 735, 1063
HpyCH4III	ACNGT	4 cut(s)	262, 343, 461, 1233
HpyCH4V	TGCA	9 cut(s)	236, 379, 502, 584, 616, 875, 1004, 1035, 1180
HpyF10VI	GCNNNNNNNGC	3 cut(s)	590, 1001, 1243
HpyF3I	CTNAG	7 cut(s)	27, 84, 369, 415, 541, 786, 1017
Hsp92II	CATG	3 cut(s)	179, 502, 746
Kzo9I	GATC	4 cut(s)	55, 183, 207, 251
LguI	GCTCTTC	1 cut(s)	812
LmnI	GCTCC	4 cut(s)	475, 590, 787, 1123
Lsp1109I	GCAGC	8 cut(s)	161, 220, 465, 468, 605, 766, 988, 1164
LweI	GCATC	1 cut(s)	1189
MaeI	CTAG	2 cut(s)	732, 1128
MaeIII	GTNAC	4 cut(s)	43, 74, 95, 745
MalI	GATC	4 cut(s)	57, 185, 209, 253
MboI	GATC	4 cut(s)	55, 183, 207, 251
MboII	GAAGA	4 cut(s)	99, 202, 283, 829
MflI	RGATCY	2 cut(s)	183, 207
MhlI	GDGCHC	3 cut(s)	542, 725, 877
MluCI	AATT	8 cut(s)	224, 359, 409, 579, 907, 950, 960, 1011
MmeI	TCCRAC	2 cut(s)	723, 957
MseI	TTAA	1 cut(s)	576
MslI	CAYNNNNRTG	2 cut(s)	559, 810
MspA1I	CMGCKG	3 cut(s)	26, 545, 1177
MspI	CCGG	2 cut(s)	973, 1057
MspR9I	CCNGG	2 cut(s)	973, 1204
Mva1269I	GAATGC	1 cut(s)	1004
MvaI	CCWGG	1 cut(s)	1204
MwoI	GCNNNNNNNGC	3 cut(s)	590, 1001, 1243
NciI	CCSGG	1 cut(s)	973
NdeI	CATATG	1 cut(s)	769
NdeII	GATC	4 cut(s)	55, 183, 207, 251
NlaIII	CATG	3 cut(s)	179, 502, 746
NlaIV	GGNNCC	5 cut(s)	318, 723, 969, 1125, 1133
NmeAIII	GCCGAG	1 cut(s)	125
NmuCI	GTSAC	1 cut(s)	745
NspI	RCATGY	1 cut(s)	746
OliI	CACNNNNGTG	1 cut(s)	559
PaeR7I	CTCGAG	2 cut(s)	597, 1239
PciSI	GCTCTTC	1 cut(s)	812
PctI	GAATGC	1 cut(s)	1004
PfeI	GAWTC	3 cut(s)	1040, 1100, 1216
Psp6I	CCWGG	1 cut(s)	1202
PspFI	CCCAGC	1 cut(s)	12
PspGI	CCWGG	1 cut(s)	1202
PspN4I	GGNNCC	5 cut(s)	318, 723, 969, 1125, 1133
PspOMI	GGGCCC	1 cut(s)	721
PspPI	GGNCC	4 cut(s)	721, 722, 967, 1131
PspXI	VCTCGAGB	2 cut(s)	597, 1239
PsuI	RGATCY	2 cut(s)	183, 207
PvuII	CAGCTG	2 cut(s)	26, 545
RsaI	GTAC	1 cut(s)	766
RsaNI	GTAC	1 cut(s)	765
RseI	CAYNNNNRTG	2 cut(s)	559, 810
SapI	GCTCTTC	1 cut(s)	812
SaqAI	TTAA	1 cut(s)	576
Sau3AI	GATC	4 cut(s)	55, 183, 207, 251
Sau96I	GGNCC	4 cut(s)	721, 722, 967, 1131
ScrFI	CCNGG	2 cut(s)	973, 1204
SduI	GDGCHC	3 cut(s)	542, 725, 877
SfaNI	GCATC	1 cut(s)	1189
SfcI	CTRYAG	2 cut(s)	63, 640
Sfr274I	CTCGAG	2 cut(s)	597, 1239
SinI	GGWCC	1 cut(s)	967
SlaI	CTCGAG	2 cut(s)	597, 1239
SmiMI	CAYNNNNRTG	2 cut(s)	559, 810
SmlI	CTYRAG	3 cut(s)	202, 597, 1239
SmoI	CTYRAG	3 cut(s)	202, 597, 1239
Sse9I	AATT	8 cut(s)	224, 359, 409, 579, 907, 950, 960, 1011
SsiI	CCGC	3 cut(s)	1175, 1193, 1246
SspMI	CTAG	2 cut(s)	732, 1128
StyD4I	CCNGG	2 cut(s)	971, 1202
StyI	CCWWGG	1 cut(s)	1127
TaaI	ACNGT	4 cut(s)	262, 343, 461, 1233
TaqI	TCGA	5 cut(s)	598, 852, 1064, 1159, 1240
TasI	AATT	8 cut(s)	224, 359, 409, 579, 907, 950, 960, 1011
TauI	GCSGC	2 cut(s)	1177, 1195
TfiI	GAWTC	3 cut(s)	1040, 1100, 1216
Tru1I	TTAA	1 cut(s)	576
Tru9I	TTAA	1 cut(s)	576
TscAI	CASTG	1 cut(s)	348
TseFI	GTSAC	1 cut(s)	745
TseI	GCWGC	8 cut(s)	149, 233, 478, 481, 593, 779, 1001, 1177
Tsp45I	GTSAC	1 cut(s)	745
TspDTI	ATGAA	4 cut(s)	324, 487, 1082, 1125
TspGWI	ACGGA	3 cut(s)	488, 549, 1108
TspRI	CASTG	1 cut(s)	348
VneI	GTGCAC	1 cut(s)	873
VpaK11BI	GGWCC	1 cut(s)	967
XapI	RAATTY	2 cut(s)	409, 1011
XceI	RCATGY	1 cut(s)	746
XhoI	CTCGAG	2 cut(s)	597, 1239
XmaJI	CCTAGG	1 cut(s)	1127
XspI	CTAG	2 cut(s)	732, 1128

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.