pycom05g13160
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
16734472 .. 16736571
2100 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g13160.2

Sequence Viewer

Length: 972 bp
ATGGTCTTCAAAGGCTGGCTCGAGGACAAGGCGCCGGCCAAGTCAGGAAAATCAACAGTTATCGCGGTGAAAAAATTGAGTTCTGAGAGCTTGCAAGGATTTGAGGAATGGCAGTCAGAGGTGAATTTCTTAGGGCGACTATCTCATCCTAATCTTGTAAAGCTATTTGGATACTGTTGGGAGGATAAGGAGCTGCTTCTTGTTTATGAGTTCATGTCAAAGGGTAGCTTGGAAAACCATCTATTTGGAAGGGGATCGGCTGTTCAGCCACTTCCATGGGATACACGGATTAAAGTTGCAATAGGAGCTGCTCGAGGCCTGGAATTCTTGCATACATCAGAGAAGCAAGTTATCTATAGAGATTTCAAAGCTTCAAATATACTTCTTGACGGGTCATATACTGCCAAGATATCCGACTTTGGCTTGGCGAAAATGGGTCCTTCAGCAAGTCAATCGCACGTGACAACACGGGTTATGGGTACATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGTCATCTGTATGTGAAAAGCGACGTGTATGGTTTTGGTGTTGTTTTGATCGAGATATTGACCGGCTTGAGGGCCCTTGATACACATCGTCCAAGTGGAAAACAGAACTTAGTAGACTGGATAAAACCATTTCTTTCAGACAAAAGAAAACTGAAAAGCATTATGGATCCCCAGCTGCAGGGAAGATATCCTTCCAAAGCTGCCTTTCGAATTTCTCTTCTTTCTCTAAAATGCATCGAATCTGAACACAGAAACCGGCCATCAATGAAAGATGTCGTGGAGACGTTGGAACGGATAGAATCGGCTAATGAACTTACAAGGGAACCAAGGCCTCGTTCTACTCATCCTATGACTCATCGACAAGGCCAGAAGCCGTTGCATCATCGCTCTCCACTTCACCCCAGGCAAGATGGATCTCAAAGCTACCAACAGTCACACCAGGTTCGAGTGAAGTAA

Protein Analysis

324

Amino Acids

36.55

Weight (kDa)

9.6

Isoelectric Point (pI)

41.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015783)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17220 AT2G17220
fragaria_vesca FvH4_2g16680
malus_domestica MD05G1135000.v1.1 MD10G1140500.v1.1
prunus_persica Prupe.8G178900_v2.0.a1
pyrus_communis pycom05g13160 pycom10g11910
rosa_chinensis RchiOBHm_Chr6g0280821
rosa_multiflora Rmu_co8480431.1_g000001
rosa_roxburghii Rroxscaffold_7G00187600
rosa_rugosa Rorug06G0134700
rosa_samantha Rh6BG249600 Rh6DG242400
rosa_wichuraiana Rw6G021440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 31
AccI GTMKAC 1 cut(s) 630
AccII CGCG 1 cut(s) 65
AciI CCGC 1 cut(s) 65
AclWI GGATC 4 cut(s) 262, 677, 690, 937
AcoI YGGCCR 2 cut(s) 36, 773
AcsI RAATTY 3 cut(s) 124, 323, 726
AcuI CTGAAG 1 cut(s) 426
AcvI CACGTG 1 cut(s) 460
AcyI GRCGYC 1 cut(s) 32
AfaI GTAC 1 cut(s) 481
AfiI CCNNNNNNNGG 2 cut(s) 585, 694
AflIII ACRYGT 1 cut(s) 540
AgsI TTSAA 3 cut(s) 10, 367, 375
AjiI CACGTC 1 cut(s) 541
AjnI CCWGG 3 cut(s) 318, 917, 954
AjuI GAANNNNNNNTTGG 2 cut(s) 835, 867
AloI GAACNNNNNNTCC 2 cut(s) 246, 278
AluBI AGCT 9 cut(s) 90, 163, 193, 228, 308, 371, 691, 716, 939
AluI AGCT 9 cut(s) 90, 163, 193, 228, 308, 371, 691, 716, 939
Alw26I GTCTC 1 cut(s) 791
AlwI GGATC 4 cut(s) 262, 677, 690, 937
Ama87I CYCGRG 2 cut(s) 20, 312
AoxI GGCC 6 cut(s) 36, 316, 588, 773, 845, 880
ApaI GGGCCC 1 cut(s) 592
ApeKI GCWGC 5 cut(s) 193, 308, 494, 691, 716
ApoI RAATTY 3 cut(s) 124, 323, 726
AspLEI GCGC 1 cut(s) 34
AspS9I GGNCC 3 cut(s) 437, 588, 589
AsuHPI GGTGA 3 cut(s) 79, 133, 905
AsuII TTCGAA 1 cut(s) 724
AvaI CYCGRG 2 cut(s) 20, 312
AvaII GGWCC 1 cut(s) 437
BaeGI GKGCMC 1 cut(s) 592
BamHI GGATCC 1 cut(s) 682
BanI GGYRCC 1 cut(s) 31
BanII GRGCYC 1 cut(s) 592
BbrPI CACGTG 1 cut(s) 460
BbvI GCAGC 5 cut(s) 180, 295, 481, 678, 703
BccI CCATC 3 cut(s) 246, 784, 920
BceAI ACGGC 1 cut(s) 874
BcgI CGANNNNNNTGC 2 cut(s) 435, 469
BciT130I CCWGG 3 cut(s) 320, 919, 956
BciVI GTATCC 2 cut(s) 164, 274
BcoDI GTCTC 1 cut(s) 791
BfmI CTRYAG 2 cut(s) 355, 692
BfoI RGCGCY 1 cut(s) 35
BfuI GTATCC 2 cut(s) 164, 274
BisI GCNGC 5 cut(s) 194, 309, 495, 692, 717
BlsI GCNGC 5 cut(s) 195, 310, 496, 693, 718
Bme1390I CCNGG 3 cut(s) 320, 919, 956
Bme18I GGWCC 1 cut(s) 437
BmeT110I CYCGRG 2 cut(s) 20, 312
BmgBI CACGTC 1 cut(s) 541
BmgT120I GGNCC 3 cut(s) 437, 588, 589
BmiI GGNNCC 5 cut(s) 33, 438, 590, 684, 840
BmrFI CCNGG 3 cut(s) 320, 919, 956
BmsI GCATC 2 cut(s) 759, 904
Bpu14I TTCGAA 1 cut(s) 724
BpuEI CTTGAG 1 cut(s) 604
BsaAI YACGTR 1 cut(s) 460
BsaBI GATNNNNATC 1 cut(s) 600
BsaHI GRCGYC 1 cut(s) 32
BsaJI CCNNGG 3 cut(s) 275, 842, 917
Bsc4I CCNNNNNNNGG 2 cut(s) 585, 694
Bse118I RCCGGY 3 cut(s) 34, 578, 771
Bse1I ACTGG 1 cut(s) 638
Bse8I GATNNNNATC 1 cut(s) 600
BseBI CCWGG 3 cut(s) 320, 919, 956
BseDI CCNNGG 3 cut(s) 275, 842, 917
BseGI GGATG 2 cut(s) 145, 859
BseJI GATNNNNATC 1 cut(s) 600
BseLI CCNNNNNNNGG 2 cut(s) 585, 694
BseMII CTCAG 2 cut(s) 75, 492
BseNI ACTGG 1 cut(s) 638
BseSI GKGCMC 1 cut(s) 592
BseXI GCAGC 5 cut(s) 180, 295, 481, 678, 703
BseYI CCCAGC 1 cut(s) 687
Bsh1236I CGCG 1 cut(s) 65
BshFI GGCC 6 cut(s) 38, 318, 590, 775, 847, 882
BshNI GGYRCC 1 cut(s) 31
BsiHKCI CYCGRG 2 cut(s) 20, 312
BsiSI CCGG 3 cut(s) 35, 579, 772
BslI CCNNNNNNNGG 2 cut(s) 585, 694
BsmAI GTCTC 1 cut(s) 791
BsmBI CGTCTC 1 cut(s) 791
BsnI GGCC 6 cut(s) 38, 318, 590, 775, 847, 882
BsoBI CYCGRG 2 cut(s) 20, 312
Bsp119I TTCGAA 1 cut(s) 724
Bsp120I GGGCCC 1 cut(s) 588
Bsp1286I GDGCHC 1 cut(s) 592
Bsp143I GATC 4 cut(s) 254, 564, 682, 929
Bsp19I CCATGG 1 cut(s) 275
BspACI CCGC 1 cut(s) 65
BspANI GGCC 6 cut(s) 38, 318, 590, 775, 847, 882
BspCNI CTCAG 2 cut(s) 76, 493
BspFNI CGCG 1 cut(s) 65
BspLI GGNNCC 5 cut(s) 33, 438, 590, 684, 840
BspMAI CTGCAG 1 cut(s) 696
BspPI GGATC 4 cut(s) 262, 677, 690, 937
BspT104I TTCGAA 1 cut(s) 724
BspT107I GGYRCC 1 cut(s) 31
BsrFI RCCGGY 3 cut(s) 34, 578, 771
BsrI ACTGG 1 cut(s) 638
BssAI RCCGGY 3 cut(s) 34, 578, 771
BssECI CCNNGG 3 cut(s) 275, 842, 917
BssMI GATC 4 cut(s) 254, 564, 682, 929
BssNI GRCGYC 1 cut(s) 32
BssT1I CCWWGG 2 cut(s) 275, 842
Bst2UI CCWGG 3 cut(s) 320, 919, 956
Bst4CI ACNGT 3 cut(s) 58, 176, 948
Bst6I CTCTTC 1 cut(s) 738
BstACI GRCGYC 1 cut(s) 32
BstBAI YACGTR 1 cut(s) 460
BstBI TTCGAA 1 cut(s) 724
BstC8I GCNNGC 3 cut(s) 17, 36, 92
BstDEI CTNAG 4 cut(s) 84, 130, 501, 625
BstDSI CCRYGG 1 cut(s) 275
BstF5I GGATG 2 cut(s) 145, 859
BstFNI CGCG 1 cut(s) 65
BstH2I RGCGCY 1 cut(s) 35
BstHHI GCGC 1 cut(s) 34
BstKTI GATC 4 cut(s) 257, 567, 685, 932
BstMAI GTCTC 1 cut(s) 791
BstMBI GATC 4 cut(s) 254, 564, 682, 929
BstMWI GCNNNNNNNGC 1 cut(s) 305
BstNI CCWGG 3 cut(s) 320, 919, 956
BstSCI CCNGG 3 cut(s) 318, 917, 954
BstSFI CTRYAG 2 cut(s) 355, 692
BstSLI GKGCMC 1 cut(s) 592
BstUI CGCG 1 cut(s) 65
BstV1I GCAGC 5 cut(s) 180, 295, 481, 678, 703
BstX2I RGATCY 2 cut(s) 682, 929
BstXI CCANNNNNNTGG 2 cut(s) 245, 276
BstYI RGATCY 2 cut(s) 682, 929
BsuI GTATCC 2 cut(s) 164, 274
BsuRI GGCC 6 cut(s) 38, 318, 590, 775, 847, 882
BtgI CCRYGG 1 cut(s) 275
BtgZI GCGATG 1 cut(s) 884
BtrI CACGTC 1 cut(s) 541
BtsCI GGATG 2 cut(s) 145, 859
Cac8I GCNNGC 3 cut(s) 17, 36, 92
CfoI GCGC 1 cut(s) 34
Cfr10I RCCGGY 3 cut(s) 34, 578, 771
Cfr13I GGNCC 3 cut(s) 437, 588, 589
CsiI ACCWGGT 1 cut(s) 954
Csp6I GTAC 1 cut(s) 480
CviAII CATG 2 cut(s) 214, 276
CviQI GTAC 1 cut(s) 480
DdeI CTNAG 4 cut(s) 84, 130, 501, 625
DinI GGCGCC 1 cut(s) 33
DpnI GATC 4 cut(s) 256, 566, 684, 931
DpnII GATC 4 cut(s) 254, 564, 682, 929
EaeI YGGCCR 2 cut(s) 36, 773
Eam1104I CTCTTC 1 cut(s) 738
EarI CTCTTC 1 cut(s) 738
Eco130I CCWWGG 2 cut(s) 275, 842
Eco147I AGGCCT 2 cut(s) 318, 847
Eco24I GRGCYC 1 cut(s) 592
Eco32I GATATC 2 cut(s) 411, 704
Eco47I GGWCC 1 cut(s) 437
Eco57I CTGAAG 1 cut(s) 426
Eco72I CACGTG 1 cut(s) 460
Eco88I CYCGRG 2 cut(s) 20, 312
EcoO109I RGGNCCY 3 cut(s) 437, 588, 589
EcoRI GAATTC 1 cut(s) 323
EcoRII CCWGG 3 cut(s) 318, 917, 954
EcoRV GATATC 2 cut(s) 411, 704
EcoT14I CCWWGG 2 cut(s) 275, 842
EcoT22I ATGCAT 1 cut(s) 752
EcoT38I GRGCYC 1 cut(s) 592
EgeI GGCGCC 1 cut(s) 33
EheI GGCGCC 1 cut(s) 33
ErhI CCWWGG 2 cut(s) 275, 842
Esp3I CGTCTC 1 cut(s) 791
FaeI CATG 2 cut(s) 217, 279
FalI AAGNNNNNCTT 4 cut(s) 212, 244, 691, 723
FatI CATG 2 cut(s) 213, 275
FauNDI CATATG 1 cut(s) 484
FblI GTMKAC 1 cut(s) 630
Fnu4HI GCNGC 5 cut(s) 194, 309, 495, 692, 717
FokI GGATG 2 cut(s) 132, 846
FriOI GRGCYC 1 cut(s) 592
Fsp4HI GCNGC 5 cut(s) 194, 309, 495, 692, 717
GlaI GCGC 1 cut(s) 33
GluI GCNGC 5 cut(s) 194, 309, 495, 692, 717
GsaI CCCAGC 1 cut(s) 691
HaeII RGCGCY 1 cut(s) 35
HaeIII GGCC 6 cut(s) 38, 318, 590, 775, 847, 882
HapII CCGG 3 cut(s) 35, 579, 772
HhaI GCGC 1 cut(s) 34
Hin1I GRCGYC 1 cut(s) 32
Hin1II CATG 2 cut(s) 217, 279
Hin6I GCGC 1 cut(s) 32
HinP1I GCGC 1 cut(s) 32
HindIII AAGCTT 1 cut(s) 369
HinfI GANTC 3 cut(s) 755, 815, 868
HpaII CCGG 3 cut(s) 35, 579, 772
HphI GGTGA 3 cut(s) 79, 133, 905
Hpy166II GTNNAC 1 cut(s) 631
Hpy188I TCNGA 6 cut(s) 85, 118, 340, 415, 655, 760
Hpy188III TCNNGA 4 cut(s) 45, 386, 500, 568
Hpy8I GTNNAC 1 cut(s) 631
Hpy99I CGWCG 1 cut(s) 542
HpyAV CCTTC 3 cut(s) 243, 450, 717
HpyCH4III ACNGT 3 cut(s) 58, 176, 948
HpyCH4IV ACGT 3 cut(s) 459, 540, 800
HpyCH4V TGCA 6 cut(s) 94, 299, 331, 694, 750, 895
HpyF10VI GCNNNNNNNGC 1 cut(s) 305
HpyF3I CTNAG 4 cut(s) 84, 130, 501, 625
HpySE526I ACGT 3 cut(s) 459, 540, 800
Hsp92I GRCGYC 1 cut(s) 32
Hsp92II CATG 2 cut(s) 217, 279
HspAI GCGC 1 cut(s) 32
KasI GGCGCC 1 cut(s) 31
KroI GCCGGC 1 cut(s) 34
KroNI GCCGGC 1 cut(s) 36
Kzo9I GATC 4 cut(s) 254, 564, 682, 929
LmnI GCTCC 3 cut(s) 190, 305, 502
Lsp1109I GCAGC 5 cut(s) 180, 295, 481, 678, 703
LweI GCATC 2 cut(s) 759, 904
MabI ACCWGGT 1 cut(s) 954
MaeII ACGT 3 cut(s) 459, 540, 800
MaeIII GTNAC 2 cut(s) 460, 948
MalI GATC 4 cut(s) 256, 566, 684, 931
MboI GATC 4 cut(s) 254, 564, 682, 929
MboII GAAGA 2 cut(s) 711, 725
MflI RGATCY 2 cut(s) 682, 929
MhlI GDGCHC 1 cut(s) 592
MluCI AATT 4 cut(s) 74, 124, 323, 726
Mly113I GGCGCC 1 cut(s) 32
MlyI GAGTC 1 cut(s) 862
MmeI TCCRAC 2 cut(s) 438, 783
MnlI CCTC 7 cut(s) 16, 97, 112, 175, 308, 579, 858
Mph1103I ATGCAT 1 cut(s) 752
MroNI GCCGGC 1 cut(s) 34
MseI TTAA 1 cut(s) 291
MslI CAYNNNNRTG 2 cut(s) 274, 525
MspA1I CMGCKG 1 cut(s) 691
MspI CCGG 3 cut(s) 35, 579, 772
MspR9I CCNGG 3 cut(s) 320, 919, 956
MvaI CCWGG 3 cut(s) 320, 919, 956
MvnI CGCG 1 cut(s) 65
MwoI GCNNNNNNNGC 1 cut(s) 305
NaeI GCCGGC 1 cut(s) 36
NarI GGCGCC 1 cut(s) 32
NcoI CCATGG 1 cut(s) 275
NdeI CATATG 1 cut(s) 484
NdeII GATC 4 cut(s) 254, 564, 682, 929
NgoMIV GCCGGC 1 cut(s) 34
NlaIII CATG 2 cut(s) 217, 279
NlaIV GGNNCC 5 cut(s) 33, 438, 590, 684, 840
NmuCI GTSAC 2 cut(s) 460, 948
NsiI ATGCAT 1 cut(s) 752
NspV TTCGAA 1 cut(s) 724
PaeR7I CTCGAG 2 cut(s) 20, 312
PceI AGGCCT 2 cut(s) 318, 847
PdiI GCCGGC 1 cut(s) 36
PfeI GAWTC 2 cut(s) 755, 815
PkrI GCNGC 5 cut(s) 195, 310, 496, 693, 718
PleI GAGTC 1 cut(s) 862
PluTI GGCGCC 1 cut(s) 35
PmaCI CACGTG 1 cut(s) 460
PmlI CACGTG 1 cut(s) 460
PpsI GAGTC 1 cut(s) 862
Ppu21I YACGTR 1 cut(s) 460
PpuMI RGGWCCY 1 cut(s) 437
Psp5II RGGWCCY 1 cut(s) 437
Psp6I CCWGG 3 cut(s) 318, 917, 954
PspCI CACGTG 1 cut(s) 460
PspFI CCCAGC 1 cut(s) 687
PspGI CCWGG 3 cut(s) 318, 917, 954
PspN4I GGNNCC 5 cut(s) 33, 438, 590, 684, 840
PspOMI GGGCCC 1 cut(s) 588
PspPI GGNCC 3 cut(s) 437, 588, 589
PspPPI RGGWCCY 1 cut(s) 437
PspXI VCTCGAGB 2 cut(s) 20, 312
PstI CTGCAG 1 cut(s) 696
PsuI RGATCY 2 cut(s) 682, 929
PvuII CAGCTG 1 cut(s) 691
RsaI GTAC 1 cut(s) 481
RsaNI GTAC 1 cut(s) 480
RseI CAYNNNNRTG 2 cut(s) 274, 525
SaqAI TTAA 1 cut(s) 291
SatI GCNGC 5 cut(s) 194, 309, 495, 692, 717
Sau3AI GATC 4 cut(s) 254, 564, 682, 929
Sau96I GGNCC 3 cut(s) 437, 588, 589
SchI GAGTC 1 cut(s) 862
ScrFI CCNGG 3 cut(s) 320, 919, 956
SduI GDGCHC 1 cut(s) 592
SexAI ACCWGGT 1 cut(s) 954
SfaNI GCATC 2 cut(s) 759, 904
SfcI CTRYAG 2 cut(s) 355, 692
SfoI GGCGCC 1 cut(s) 33
Sfr274I CTCGAG 2 cut(s) 20, 312
SfuI TTCGAA 1 cut(s) 724
SinI GGWCC 1 cut(s) 437
SlaI CTCGAG 2 cut(s) 20, 312
SmiMI CAYNNNNRTG 2 cut(s) 274, 525
SmlI CTYRAG 3 cut(s) 20, 312, 583
SmoI CTYRAG 3 cut(s) 20, 312, 583
Sse9I AATT 4 cut(s) 74, 124, 323, 726
SseBI AGGCCT 2 cut(s) 318, 847
SsiI CCGC 1 cut(s) 65
SspDI GGCGCC 1 cut(s) 31
StuI AGGCCT 2 cut(s) 318, 847
StyD4I CCNGG 3 cut(s) 318, 917, 954
StyI CCWWGG 2 cut(s) 275, 842
TaaI ACNGT 3 cut(s) 58, 176, 948
TaiI ACGT 3 cut(s) 462, 543, 803
TaqI TCGA 7 cut(s) 21, 313, 567, 724, 753, 874, 961
TasI AATT 4 cut(s) 74, 124, 323, 726
TfiI GAWTC 2 cut(s) 755, 815
Tru1I TTAA 1 cut(s) 291
Tru9I TTAA 1 cut(s) 291
TseFI GTSAC 2 cut(s) 460, 948
TseI GCWGC 5 cut(s) 193, 308, 494, 691, 716
Tsp45I GTSAC 2 cut(s) 460, 948
TspDTI ATGAA 3 cut(s) 202, 797, 840
TspGWI ACGGA 2 cut(s) 301, 823
VpaK11BI GGWCC 1 cut(s) 437
XapI RAATTY 3 cut(s) 124, 323, 726
XhoI CTCGAG 2 cut(s) 20, 312
XmiI GTMKAC 1 cut(s) 630
Zsp2I ATGCAT 1 cut(s) 752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.