FvH4_2g16680
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
14557062 .. 14560744
3683 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g16680.t1

Sequence Viewer

Length: 1269 bp
ATGGGGAATTGCTGGTTTTCTGCTTCAGCTGAAGACCCAACACCTGCTACTACTGGTCATCTCAGCACAGCTGCGAGTAATGTATCTCAATCGACCAGTAATACCATTTCCACTTCTTCTGGGGGAAGCAGTGTATCCAGGAACAGCCAGTTTTCGGCAAGAAGTGGCGATGAGACCTGTCCAGATGGGCAGATTCTACCCGATGCAAACTTGAGAATCTTCAGTTATCTGGAATTGAAGAGTGCAACTCGGAACTTCAGATCAGACACGGTACTTGGGGAAGGAGGTTTTGGGAAAGTCTATAAAGGTTGGCTTGAGGAGAGGCCAGCCATGAAACCGGGAAGGACAACTGTAATTGCTGTAAAGAAATTGAATTCGGAGAGCTTGCAAGGGTTTGAGGAATGGCAGTCAGAGGTGAATTTCTTGGGTAGACTTTCTCATCCTAATCTTGTAAAGCTGTTGGGGTACTGTTTGGAGGAGAAAGAACTGCTGCTTGTCTATGAGTTCATGCAAAAAGGAAGCTTGGAAAACCATCTTTTTGGAAGGGGCTCAGTTGTTCAGCCACTTCCATGGGACATACGGCTTAAAGTTGCAATAGGAGCAGCTCGAGGCCTGGCATTTTTGCATACATCAGAGAAGCAAGTAATCTATAGAGATTTCAAAGCTTCCAATATACTACTTGACGGGTCCTTTAATGCCAAGATATCCGACTTTGGCTTGGCAAAATTGGGTCCTTCAGAGAGTCAATCGCATGTGACAACCCGGGTCATGGGCACATATGGTTATGCTGCTCCTGAGTATGTTTCCACAGGGCATCTTTATGTGAAGAGCGATGTGTACGGTTTTGGTGTTGTGCTGGTTGAGATCTTAACAGGCTTACGAGCACTTGATACGAATCGTCCAAGTGGAAGACATAATCTTGTGGAGTGGATAAAACCATTTTTATCAGATAAAAGAAAATTGAAAGGCATTATGGACCCTCGACTGGAGGCAAAGTATCCAGCCAAAGCTGCATTCCGTATTTCCCAGCTTGCTCTAAAATGCATTGAATCTGAACACAAAAACCGGCCATCAATGATAGATGTTGTGGAGACTTTGGAAAGGATCCAGTCAGTGAATGAAGTTATAAGGGAACCTAGGATTCGTTCCAATCGTTCTACTCATCCTATGGCTCATCGCCAAGGTCAGACACCTTTGCACTATCGTTCTCCACTTCACCCCAGGCCAGATGAAAATCAAAACTACCAAGGGTCGCCTCGAATGAGGTAA

Protein Analysis

423

Amino Acids

46.98

Weight (kDa)

9.32

Isoelectric Point (pI)

38.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 88 - 364 1.7e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 89 - 366 2.7e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015783)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17220 AT2G17220
fragaria_vesca FvH4_2g16680
malus_domestica MD05G1135000.v1.1 MD10G1140500.v1.1
prunus_persica Prupe.8G178900_v2.0.a1
pyrus_communis pycom05g13160 pycom10g11910
rosa_chinensis RchiOBHm_Chr6g0280821
rosa_multiflora Rmu_co8480431.1_g000001
rosa_roxburghii Rroxscaffold_7G00187600
rosa_rugosa Rorug06G0134700
rosa_samantha Rh6BG249600 Rh6DG242400
rosa_wichuraiana Rw6G021440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1127
AarI CACCTGC 1 cut(s) 52
Acc36I ACCTGC 1 cut(s) 52
AccI GTMKAC 1 cut(s) 430
AclWI GGATC 2 cut(s) 1099, 1112
AcoI YGGCCR 1 cut(s) 1067
AcsI RAATTY 2 cut(s) 373, 418
AcuI CTGAAG 5 cut(s) 9, 51, 205, 241, 720
AfaI GTAC 3 cut(s) 273, 467, 839
AfiI CCNNNNNNNGG 3 cut(s) 154, 769, 985
AgsI TTSAA 5 cut(s) 238, 373, 661, 964, 1049
AjnI CCWGG 3 cut(s) 137, 612, 1220
AjuI GAANNNNNNNTTGG 4 cut(s) 273, 305, 998, 1030
AluBI AGCT 9 cut(s) 29, 71, 384, 457, 522, 605, 665, 1010, 1030
AluI AGCT 9 cut(s) 29, 71, 384, 457, 522, 605, 665, 1010, 1030
Alw21I GWGCWC 1 cut(s) 886
Alw26I GTCTC 2 cut(s) 167, 1085
AlwI GGATC 2 cut(s) 1099, 1112
Ama87I CYCGRG 2 cut(s) 606, 762
AoxI GGCC 4 cut(s) 323, 610, 1067, 1223
ApeKI GCWGC 5 cut(s) 71, 490, 602, 788, 1010
ApoI RAATTY 2 cut(s) 373, 418
AspA2I CCTAGG 1 cut(s) 1136
AspS9I GGNCC 3 cut(s) 687, 731, 976
AsuC2I CCSGG 3 cut(s) 339, 763, 764
AsuHPI GGTGA 2 cut(s) 427, 1208
AvaI CYCGRG 2 cut(s) 606, 762
AvaII GGWCC 3 cut(s) 687, 731, 976
AvrII CCTAGG 1 cut(s) 1136
BaeGI GKGCMC 1 cut(s) 776
BamHI GGATCC 1 cut(s) 1104
BanII GRGCYC 1 cut(s) 551
BbsI GAAGAC 2 cut(s) 39, 916
Bbv12I GWGCWC 1 cut(s) 886
BbvI GCAGC 5 cut(s) 58, 477, 614, 775, 997
BccI CCATC 3 cut(s) 179, 540, 1078
BceAI ACGGC 1 cut(s) 596
BciT130I CCWGG 3 cut(s) 139, 614, 1222
BciVI GTATCC 2 cut(s) 145, 1008
BcnI CCSGG 3 cut(s) 339, 763, 764
BcoDI GTCTC 2 cut(s) 167, 1085
BfaI CTAG 1 cut(s) 1137
BfmI CTRYAG 1 cut(s) 649
BfuAI ACCTGC 1 cut(s) 52
BfuI GTATCC 2 cut(s) 145, 1008
BglII AGATCT 1 cut(s) 864
BisI GCNGC 5 cut(s) 72, 491, 603, 789, 1011
BlnI CCTAGG 1 cut(s) 1136
BlsI GCNGC 5 cut(s) 73, 492, 604, 790, 1012
Bme1390I CCNGG 6 cut(s) 139, 339, 614, 763, 764, 1222
Bme18I GGWCC 3 cut(s) 687, 731, 976
BmeT110I CYCGRG 2 cut(s) 606, 762
BmgT120I GGNCC 3 cut(s) 687, 731, 976
BmiI GGNNCC 5 cut(s) 688, 732, 978, 1106, 1134
BmrFI CCNGG 6 cut(s) 139, 339, 614, 763, 764, 1222
BmsI GCATC 2 cut(s) 193, 823
BpiI GAAGAC 2 cut(s) 39, 916
BplI GAGNNNNNCTC 2 cut(s) 232, 264
BpmI CTGGAG 1 cut(s) 1007
BpuEI CTTGAG 2 cut(s) 232, 335
BpuMI CCSGG 3 cut(s) 339, 763, 764
BsaBI GATNNNNATC 2 cut(s) 894, 1233
BsaI GGTCTC 1 cut(s) 167
BsaJI CCNNGG 6 cut(s) 569, 762, 1136, 1180, 1220, 1246
BsaXI ACNNNNNCTCC 2 cut(s) 980, 1010
Bsc4I CCNNNNNNNGG 3 cut(s) 154, 769, 985
Bse118I RCCGGY 1 cut(s) 1065
Bse1I ACTGG 5 cut(s) 58, 96, 148, 990, 1108
Bse8I GATNNNNATC 2 cut(s) 894, 1233
BseBI CCWGG 3 cut(s) 139, 614, 1222
BseDI CCNNGG 6 cut(s) 569, 762, 1136, 1180, 1220, 1246
BseGI GGATG 2 cut(s) 439, 1162
BseJI GATNNNNATC 2 cut(s) 894, 1233
BseLI CCNNNNNNNGG 3 cut(s) 154, 769, 985
BseMII CTCAG 3 cut(s) 76, 564, 786
BseNI ACTGG 5 cut(s) 58, 96, 148, 990, 1108
BseRI GAGGAG 2 cut(s) 332, 491
BseSI GKGCMC 1 cut(s) 776
BseXI GCAGC 5 cut(s) 58, 477, 614, 775, 997
BseYI CCCAGC 1 cut(s) 1026
BshFI GGCC 4 cut(s) 325, 612, 1069, 1225
BsiHKAI GWGCWC 1 cut(s) 886
BsiHKCI CYCGRG 2 cut(s) 606, 762
BsiSI CCGG 3 cut(s) 338, 763, 1066
BslFI GGGAC 1 cut(s) 587
BslI CCNNNNNNNGG 3 cut(s) 154, 769, 985
BsmAI GTCTC 2 cut(s) 167, 1085
BsmFI GGGAC 1 cut(s) 587
BsmI GAATGC 1 cut(s) 1013
BsnI GGCC 4 cut(s) 325, 612, 1069, 1225
Bso31I GGTCTC 1 cut(s) 167
BsoBI CYCGRG 2 cut(s) 606, 762
Bsp1286I GDGCHC 3 cut(s) 551, 776, 886
Bsp143I GATC 3 cut(s) 260, 864, 1104
Bsp19I CCATGG 1 cut(s) 569
BspANI GGCC 4 cut(s) 325, 612, 1069, 1225
BspCNI CTCAG 3 cut(s) 75, 563, 787
BspLI GGNNCC 5 cut(s) 688, 732, 978, 1106, 1134
BspMI ACCTGC 1 cut(s) 52
BspPI GGATC 2 cut(s) 1099, 1112
BspQI GCTCTTC 1 cut(s) 821
BspTNI GGTCTC 1 cut(s) 167
BsrFI RCCGGY 1 cut(s) 1065
BsrI ACTGG 5 cut(s) 58, 96, 148, 990, 1108
BssAI RCCGGY 1 cut(s) 1065
BssECI CCNNGG 6 cut(s) 569, 762, 1136, 1180, 1220, 1246
BssMI GATC 3 cut(s) 260, 864, 1104
BssT1I CCWWGG 4 cut(s) 569, 1136, 1180, 1246
Bst2UI CCWGG 3 cut(s) 139, 614, 1222
Bst4CI ACNGT 4 cut(s) 271, 352, 470, 842
Bst6I CTCTTC 2 cut(s) 233, 821
BstC8I GCNNGC 3 cut(s) 327, 386, 1032
BstDEI CTNAG 3 cut(s) 62, 550, 795
BstDSI CCRYGG 1 cut(s) 569
BstF5I GGATG 2 cut(s) 439, 1162
BstKTI GATC 3 cut(s) 263, 867, 1107
BstMAI GTCTC 2 cut(s) 167, 1085
BstMBI GATC 3 cut(s) 260, 864, 1104
BstMWI GCNNNNNNNGC 2 cut(s) 599, 1010
BstNI CCWGG 3 cut(s) 139, 614, 1222
BstNSI RCATGY 1 cut(s) 755
BstSCI CCNGG 6 cut(s) 137, 337, 612, 761, 762, 1220
BstSFI CTRYAG 1 cut(s) 649
BstSLI GKGCMC 1 cut(s) 776
BstV1I GCAGC 5 cut(s) 58, 477, 614, 775, 997
BstV2I GAAGAC 2 cut(s) 39, 916
BstX2I RGATCY 2 cut(s) 864, 1104
BstXI CCANNNNNNTGG 2 cut(s) 539, 570
BstYI RGATCY 2 cut(s) 864, 1104
BsuI GTATCC 2 cut(s) 145, 1008
BsuRI GGCC 4 cut(s) 325, 612, 1069, 1225
BtgI CCRYGG 1 cut(s) 569
BtgZI GCGATG 3 cut(s) 183, 846, 1160
BtsCI GGATG 2 cut(s) 439, 1162
BtsI GCAGTG 1 cut(s) 136
BtsIMutI CAGTG 2 cut(s) 136, 1119
BveI ACCTGC 1 cut(s) 52
Cac8I GCNNGC 3 cut(s) 327, 386, 1032
Cfr10I RCCGGY 1 cut(s) 1065
Cfr13I GGNCC 3 cut(s) 687, 731, 976
Cfr9I CCCGGG 1 cut(s) 762
Csp6I GTAC 3 cut(s) 272, 466, 838
CviAII CATG 5 cut(s) 331, 508, 570, 752, 769
CviQI GTAC 3 cut(s) 272, 466, 838
DdeI CTNAG 3 cut(s) 62, 550, 795
DpnI GATC 3 cut(s) 262, 866, 1106
DpnII GATC 3 cut(s) 260, 864, 1104
EaeI YGGCCR 1 cut(s) 1067
Eam1104I CTCTTC 2 cut(s) 233, 821
EarI CTCTTC 2 cut(s) 233, 821
Eco130I CCWWGG 4 cut(s) 569, 1136, 1180, 1246
Eco147I AGGCCT 1 cut(s) 612
Eco24I GRGCYC 1 cut(s) 551
Eco31I GGTCTC 1 cut(s) 167
Eco32I GATATC 1 cut(s) 705
Eco47I GGWCC 3 cut(s) 687, 731, 976
Eco57I CTGAAG 5 cut(s) 9, 51, 205, 241, 720
Eco88I CYCGRG 2 cut(s) 606, 762
EcoO109I RGGNCCY 2 cut(s) 687, 731
EcoRI GAATTC 1 cut(s) 373
EcoRII CCWGG 3 cut(s) 137, 612, 1220
EcoRV GATATC 1 cut(s) 705
EcoT14I CCWWGG 4 cut(s) 569, 1136, 1180, 1246
EcoT22I ATGCAT 1 cut(s) 1046
EcoT38I GRGCYC 1 cut(s) 551
ErhI CCWWGG 4 cut(s) 569, 1136, 1180, 1246
FaeI CATG 5 cut(s) 334, 511, 573, 755, 772
FalI AAGNNNNNCTT 2 cut(s) 297, 329
FaqI GGGAC 1 cut(s) 587
FatI CATG 5 cut(s) 330, 507, 569, 751, 768
FauNDI CATATG 1 cut(s) 778
FblI GTMKAC 1 cut(s) 430
Fnu4HI GCNGC 5 cut(s) 72, 491, 603, 789, 1011
FokI GGATG 2 cut(s) 426, 1149
FriOI GRGCYC 1 cut(s) 551
Fsp4HI GCNGC 5 cut(s) 72, 491, 603, 789, 1011
FspBI CTAG 1 cut(s) 1137
GluI GCNGC 5 cut(s) 72, 491, 603, 789, 1011
GsaI CCCAGC 1 cut(s) 1030
GsuI CTGGAG 1 cut(s) 1007
HaeIII GGCC 4 cut(s) 325, 612, 1069, 1225
HapII CCGG 3 cut(s) 338, 763, 1066
Hin1II CATG 5 cut(s) 334, 511, 573, 755, 772
HindIII AAGCTT 2 cut(s) 520, 663
HinfI GANTC 6 cut(s) 193, 216, 742, 895, 1049, 1141
HpaII CCGG 3 cut(s) 338, 763, 1066
HphI GGTGA 2 cut(s) 427, 1208
Hpy166II GTNNAC 2 cut(s) 431, 838
Hpy188III TCNNGA 3 cut(s) 182, 230, 794
Hpy8I GTNNAC 2 cut(s) 431, 838
HpyAV CCTTC 4 cut(s) 275, 336, 537, 744
HpyCH4III ACNGT 4 cut(s) 271, 352, 470, 842
HpyCH4V TGCA 9 cut(s) 206, 245, 388, 511, 593, 625, 1013, 1044, 1198
HpyF10VI GCNNNNNNNGC 2 cut(s) 599, 1010
HpyF3I CTNAG 3 cut(s) 62, 550, 795
Hsp92II CATG 5 cut(s) 334, 511, 573, 755, 772
Kzo9I GATC 3 cut(s) 260, 864, 1104
LguI GCTCTTC 1 cut(s) 821
LmnI GCTCC 2 cut(s) 599, 796
Lsp1109I GCAGC 5 cut(s) 58, 477, 614, 775, 997
LweI GCATC 2 cut(s) 193, 823
MaeI CTAG 1 cut(s) 1137
MaeIII GTNAC 1 cut(s) 754
MalI GATC 3 cut(s) 262, 866, 1106
MboI GATC 3 cut(s) 260, 864, 1104
MboII GAAGA 6 cut(s) 44, 108, 211, 250, 838, 921
MflI RGATCY 2 cut(s) 864, 1104
MhlI GDGCHC 3 cut(s) 551, 776, 886
MluCI AATT 8 cut(s) 7, 233, 354, 368, 373, 418, 725, 959
MlyI GAGTC 1 cut(s) 751
MmeI TCCRAC 1 cut(s) 732
Mph1103I ATGCAT 1 cut(s) 1046
MseI TTAA 3 cut(s) 585, 693, 869
MslI CAYNNNNRTG 2 cut(s) 568, 819
MspA1I CMGCKG 2 cut(s) 29, 71
MspI CCGG 3 cut(s) 338, 763, 1066
MspR9I CCNGG 6 cut(s) 139, 339, 614, 763, 764, 1222
Mva1269I GAATGC 1 cut(s) 1013
MvaI CCWGG 3 cut(s) 139, 614, 1222
MwoI GCNNNNNNNGC 2 cut(s) 599, 1010
NciI CCSGG 3 cut(s) 339, 763, 764
NcoI CCATGG 1 cut(s) 569
NdeI CATATG 1 cut(s) 778
NdeII GATC 3 cut(s) 260, 864, 1104
NlaIII CATG 5 cut(s) 334, 511, 573, 755, 772
NlaIV GGNNCC 5 cut(s) 688, 732, 978, 1106, 1134
NmuCI GTSAC 1 cut(s) 754
NsiI ATGCAT 1 cut(s) 1046
NspI RCATGY 1 cut(s) 755
PaeR7I CTCGAG 1 cut(s) 606
PaqCI CACCTGC 1 cut(s) 52
PceI AGGCCT 1 cut(s) 612
PciSI GCTCTTC 1 cut(s) 821
PcsI WCGNNNNNNNCGW 1 cut(s) 1150
PctI GAATGC 1 cut(s) 1013
PfeI GAWTC 5 cut(s) 193, 216, 895, 1049, 1141
PfoI TCCNGGA 1 cut(s) 137
PkrI GCNGC 5 cut(s) 73, 492, 604, 790, 1012
PleI GAGTC 1 cut(s) 750
PpsI GAGTC 1 cut(s) 750
PpuMI RGGWCCY 2 cut(s) 687, 731
PsiI TTATAA 1 cut(s) 1127
Psp5II RGGWCCY 2 cut(s) 687, 731
Psp6I CCWGG 3 cut(s) 137, 612, 1220
PspFI CCCAGC 1 cut(s) 1026
PspGI CCWGG 3 cut(s) 137, 612, 1220
PspN4I GGNNCC 5 cut(s) 688, 732, 978, 1106, 1134
PspPI GGNCC 3 cut(s) 687, 731, 976
PspPPI RGGWCCY 2 cut(s) 687, 731
PspXI VCTCGAGB 1 cut(s) 606
PsuI RGATCY 2 cut(s) 864, 1104
PvuII CAGCTG 2 cut(s) 29, 71
RsaI GTAC 3 cut(s) 273, 467, 839
RsaNI GTAC 3 cut(s) 272, 466, 838
RseI CAYNNNNRTG 2 cut(s) 568, 819
SapI GCTCTTC 1 cut(s) 821
SaqAI TTAA 3 cut(s) 585, 693, 869
SatI GCNGC 5 cut(s) 72, 491, 603, 789, 1011
Sau3AI GATC 3 cut(s) 260, 864, 1104
Sau96I GGNCC 3 cut(s) 687, 731, 976
SchI GAGTC 1 cut(s) 751
ScrFI CCNGG 6 cut(s) 139, 339, 614, 763, 764, 1222
SduI GDGCHC 3 cut(s) 551, 776, 886
SfaNI GCATC 2 cut(s) 193, 823
SfcI CTRYAG 1 cut(s) 649
Sfr274I CTCGAG 1 cut(s) 606
SinI GGWCC 3 cut(s) 687, 731, 976
SlaI CTCGAG 1 cut(s) 606
SmaI CCCGGG 1 cut(s) 764
SmiMI CAYNNNNRTG 2 cut(s) 568, 819
SmlI CTYRAG 3 cut(s) 211, 314, 606
SmoI CTYRAG 3 cut(s) 211, 314, 606
Sse9I AATT 8 cut(s) 7, 233, 354, 368, 373, 418, 725, 959
SseBI AGGCCT 1 cut(s) 612
SspMI CTAG 1 cut(s) 1137
StuI AGGCCT 1 cut(s) 612
StyD4I CCNGG 6 cut(s) 137, 337, 612, 761, 762, 1220
StyI CCWWGG 4 cut(s) 569, 1136, 1180, 1246
TaaI ACNGT 4 cut(s) 271, 352, 470, 842
TaqI TCGA 4 cut(s) 92, 607, 982, 1258
TasI AATT 8 cut(s) 7, 233, 354, 368, 373, 418, 725, 959
TfiI GAWTC 5 cut(s) 193, 216, 895, 1049, 1141
Tru1I TTAA 3 cut(s) 585, 693, 869
Tru9I TTAA 3 cut(s) 585, 693, 869
TscAI CASTG 2 cut(s) 136, 1119
TseFI GTSAC 1 cut(s) 754
TseI GCWGC 5 cut(s) 71, 490, 602, 788, 1010
Tsp45I GTSAC 1 cut(s) 754
TspDTI ATGAA 4 cut(s) 347, 496, 1134, 1245
TspGWI ACGGA 1 cut(s) 1007
TspMI CCCGGG 1 cut(s) 762
TspRI CASTG 2 cut(s) 136, 1119
VpaK11BI GGWCC 3 cut(s) 687, 731, 976
XapI RAATTY 2 cut(s) 373, 418
XceI RCATGY 1 cut(s) 755
XhoI CTCGAG 1 cut(s) 606
XmaI CCCGGG 1 cut(s) 762
XmaJI CCTAGG 1 cut(s) 1136
XmiI GTMKAC 1 cut(s) 430
XspI CTAG 1 cut(s) 1137
Zsp2I ATGCAT 1 cut(s) 1046
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.