ribonuclease activity
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G17520 |
| fragaria_vesca | FvH4_1g10190 FvH4_1g10190 FvH4_1g10190 FvH4_1g10190 FvH4_1g10190 |
| malus_domestica | MD02G1114000.v1.1 |
| prunus_persica | Prupe.7G185000_v2.0.a1 |
| pyrus_communis | pycom02g08880 |
| rosa_chinensis | RchiOBHm_Chr2g0096971 |
| rosa_laevigata | RLG00000016688 |
| rosa_multiflora | Rmu_sc0001651.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00145110 |
| rosa_rugosa | Rorug02G0062600 Rorug02G0062600 |
| rosa_samantha | Rh2AG110400 Rh2BG112200 Rh2CG114300 Rh2DG113400 |
| rosa_wichuraiana | Rw2G008540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1560 |
| AarI | CACCTGC | 1 cut(s) | 1475 |
| Acc36I | ACCTGC | 1 cut(s) | 1475 |
| AccI | GTMKAC | 2 cut(s) | 1443, 1998 |
| AccII | CGCG | 1 cut(s) | 1109 |
| AccIII | TCCGGA | 1 cut(s) | 2368 |
| AciI | CCGC | 8 cut(s) | 5, 25, 78, 81, 130, 368, 564, 1107 |
| AclWI | GGATC | 7 cut(s) | 71, 268, 466, 695, 781, 1155, 1558 |
| AcoI | YGGCCR | 2 cut(s) | 127, 1141 |
| AcsI | RAATTY | 3 cut(s) | 661, 750, 2373 |
| AcuI | CTGAAG | 5 cut(s) | 594, 664, 1563, 2016, 2109 |
| AfaI | GTAC | 4 cut(s) | 2215, 2417, 2427, 2504 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 80 |
| AflIII | ACRYGT | 1 cut(s) | 2017 |
| AgeI | ACCGGT | 1 cut(s) | 1934 |
| AhlI | ACTAGT | 1 cut(s) | 470 |
| AjnI | CCWGG | 1 cut(s) | 1143 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1591, 1623 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1088, 1120 |
| Alw21I | GWGCWC | 2 cut(s) | 819, 1161 |
| Alw26I | GTCTC | 3 cut(s) | 75, 1024, 2122 |
| AlwI | GGATC | 7 cut(s) | 71, 268, 466, 695, 781, 1155, 1558 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1832, 2066 |
| Aor13HI | TCCGGA | 1 cut(s) | 2368 |
| AoxI | GGCC | 6 cut(s) | 127, 793, 990, 1141, 1306, 1310 |
| ApeKI | GCWGC | 5 cut(s) | 86, 220, 686, 1553, 1861 |
| ApoI | RAATTY | 3 cut(s) | 661, 750, 2373 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1112, 1144, 2402, 2434 |
| AsiGI | ACCGGT | 1 cut(s) | 1934 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 594, 613, 2019 |
| AspLEI | GCGC | 3 cut(s) | 86, 2084, 2286 |
| AspS9I | GGNCC | 5 cut(s) | 246, 731, 794, 991, 1076 |
| AsuC2I | CCSGG | 1 cut(s) | 126 |
| AsuHPI | GGTGA | 7 cut(s) | 48, 255, 966, 1616, 1623, 1808, 1967 |
| AsuNHI | GCTAGC | 1 cut(s) | 566 |
| AvaII | GGWCC | 3 cut(s) | 246, 731, 1076 |
| BalI | TGGCCA | 1 cut(s) | 1143 |
| BanII | GRGCYC | 1 cut(s) | 1161 |
| BauI | CACGAG | 3 cut(s) | 554, 1137, 1884 |
| Bbv12I | GWGCWC | 2 cut(s) | 819, 1161 |
| BbvI | GCAGC | 5 cut(s) | 73, 232, 673, 1540, 1873 |
| BccI | CCATC | 8 cut(s) | 36, 124, 194, 377, 437, 482, 1211, 2109 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 134, 168, 2402, 2436 |
| BciT130I | CCWGG | 1 cut(s) | 1145 |
| BciVI | GTATCC | 2 cut(s) | 114, 1108 |
| BclI | TGATCA | 2 cut(s) | 823, 1429 |
| BcnI | CCSGG | 1 cut(s) | 126 |
| BcoDI | GTCTC | 3 cut(s) | 75, 1024, 2122 |
| BcuI | ACTAGT | 1 cut(s) | 470 |
| BfmI | CTRYAG | 5 cut(s) | 1314, 1468, 2229, 2287, 2455 |
| BfoI | RGCGCY | 2 cut(s) | 87, 2287 |
| BfuAI | ACCTGC | 1 cut(s) | 1475 |
| BfuI | GTATCC | 2 cut(s) | 114, 1108 |
| BmcAI | AGTACT | 2 cut(s) | 2417, 2504 |
| Bme1390I | CCNGG | 2 cut(s) | 126, 1145 |
| Bme18I | GGWCC | 3 cut(s) | 246, 731, 1076 |
| BmgT120I | GGNCC | 5 cut(s) | 246, 731, 794, 991, 1076 |
| BmiI | GGNNCC | 2 cut(s) | 288, 993 |
| BmrFI | CCNGG | 2 cut(s) | 126, 1145 |
| BmrI | ACTGGG | 1 cut(s) | 654 |
| BmsI | GCATC | 5 cut(s) | 897, 1391, 1954, 2137, 2319 |
| BmtI | GCTAGC | 1 cut(s) | 570 |
| BmuI | ACTGGG | 1 cut(s) | 654 |
| BoxI | GACNNNNGTC | 2 cut(s) | 729, 970 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2203, 2235 |
| BpmI | CTGGAG | 2 cut(s) | 549, 2205 |
| BpuEI | CTTGAG | 1 cut(s) | 644 |
| BpuMI | CCSGG | 1 cut(s) | 126 |
| BsaBI | GATNNNNATC | 1 cut(s) | 387 |
| BsaJI | CCNNGG | 2 cut(s) | 59, 727 |
| BsaWI | WCCGGW | 2 cut(s) | 1934, 2368 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 80 |
| Bse118I | RCCGGY | 2 cut(s) | 1308, 1934 |
| Bse1I | ACTGG | 6 cut(s) | 248, 532, 649, 751, 977, 2222 |
| Bse3DI | GCAATG | 2 cut(s) | 1377, 2211 |
| Bse8I | GATNNNNATC | 1 cut(s) | 387 |
| BseAI | TCCGGA | 1 cut(s) | 2368 |
| BseBI | CCWGG | 1 cut(s) | 1145 |
| BseDI | CCNNGG | 2 cut(s) | 59, 727 |
| BseGI | GGATG | 4 cut(s) | 1945, 2101, 2251, 2310 |
| BseJI | GATNNNNATC | 1 cut(s) | 387 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 80 |
| BseMI | GCAATG | 2 cut(s) | 1377, 2211 |
| BseMII | CTCAG | 2 cut(s) | 309, 2133 |
| BseNI | ACTGG | 6 cut(s) | 248, 532, 649, 751, 977, 2222 |
| BseX3I | CGGCCG | 1 cut(s) | 127 |
| BseXI | GCAGC | 5 cut(s) | 73, 232, 673, 1540, 1873 |
| BsgI | GTGCAG | 1 cut(s) | 1908 |
| Bsh1236I | CGCG | 1 cut(s) | 1109 |
| Bsh1285I | CGRYCG | 2 cut(s) | 111, 130 |
| BshFI | GGCC | 6 cut(s) | 129, 795, 992, 1143, 1308, 1312 |
| BshTI | ACCGGT | 1 cut(s) | 1934 |
| BsiEI | CGRYCG | 2 cut(s) | 111, 130 |
| BsiHKAI | GWGCWC | 2 cut(s) | 819, 1161 |
| BsiSI | CCGG | 4 cut(s) | 126, 1309, 1935, 2369 |
| BslFI | GGGAC | 2 cut(s) | 108, 1721 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 80 |
| BsmAI | GTCTC | 3 cut(s) | 75, 1024, 2122 |
| BsmFI | GGGAC | 2 cut(s) | 108, 1721 |
| BsnI | GGCC | 6 cut(s) | 129, 795, 992, 1143, 1308, 1312 |
| Bsp1286I | GDGCHC | 2 cut(s) | 819, 1161 |
| Bsp13I | TCCGGA | 1 cut(s) | 2368 |
| Bsp19I | CCATGG | 1 cut(s) | 59 |
| BspACI | CCGC | 8 cut(s) | 5, 25, 78, 81, 130, 368, 564, 1107 |
| BspANI | GGCC | 6 cut(s) | 129, 795, 992, 1143, 1308, 1312 |
| BspCNI | CTCAG | 2 cut(s) | 310, 2132 |
| BspEI | TCCGGA | 1 cut(s) | 2368 |
| BspFNI | CGCG | 1 cut(s) | 1109 |
| BspHI | TCATGA | 1 cut(s) | 1345 |
| BspLI | GGNNCC | 2 cut(s) | 288, 993 |
| BspMAI | CTGCAG | 1 cut(s) | 1472 |
| BspMI | ACCTGC | 1 cut(s) | 1475 |
| BspOI | GCTAGC | 1 cut(s) | 570 |
| BspPI | GGATC | 7 cut(s) | 71, 268, 466, 695, 781, 1155, 1558 |
| BsrDI | GCAATG | 2 cut(s) | 1377, 2211 |
| BsrFI | RCCGGY | 2 cut(s) | 1308, 1934 |
| BsrI | ACTGG | 6 cut(s) | 248, 532, 649, 751, 977, 2222 |
| BssAI | RCCGGY | 2 cut(s) | 1308, 1934 |
| BssECI | CCNNGG | 2 cut(s) | 59, 727 |
| BssNAI | GTATAC | 1 cut(s) | 1444 |
| BssSI | CACGAG | 3 cut(s) | 554, 1137, 1884 |
| BssT1I | CCWWGG | 1 cut(s) | 59 |
| Bst1107I | GTATAC | 1 cut(s) | 1444 |
| Bst2BI | CACGAG | 3 cut(s) | 554, 1137, 1884 |
| Bst2UI | CCWGG | 1 cut(s) | 1145 |
| Bst4CI | ACNGT | 9 cut(s) | 379, 403, 670, 1100, 1282, 1764, 2133, 2395, 2430 |
| Bst6I | CTCTTC | 1 cut(s) | 600 |
| BstC8I | GCNNGC | 6 cut(s) | 564, 568, 1310, 1784, 1847, 1851 |
| BstDEI | CTNAG | 3 cut(s) | 318, 537, 2119 |
| BstDSI | CCRYGG | 1 cut(s) | 59 |
| BstEII | GGTNACC | 3 cut(s) | 972, 1622, 1814 |
| BstF5I | GGATG | 4 cut(s) | 1945, 2101, 2251, 2310 |
| BstFNI | CGCG | 1 cut(s) | 1109 |
| BstH2I | RGCGCY | 2 cut(s) | 87, 2287 |
| BstHHI | GCGC | 3 cut(s) | 86, 2084, 2286 |
| BstMAI | GTCTC | 3 cut(s) | 75, 1024, 2122 |
| BstMCI | CGRYCG | 2 cut(s) | 111, 130 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 885, 940, 1842, 2225, 2290 |
| BstNI | CCWGG | 1 cut(s) | 1145 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 729, 970 |
| BstPI | GGTNACC | 3 cut(s) | 972, 1622, 1814 |
| BstSCI | CCNGG | 2 cut(s) | 124, 1143 |
| BstSFI | CTRYAG | 5 cut(s) | 1314, 1468, 2229, 2287, 2455 |
| BstUI | CGCG | 1 cut(s) | 1109 |
| BstV1I | GCAGC | 5 cut(s) | 73, 232, 673, 1540, 1873 |
| BstX2I | RGATCY | 1 cut(s) | 1563 |
| BstYI | RGATCY | 1 cut(s) | 1563 |
| BstZ17I | GTATAC | 1 cut(s) | 1444 |
| BstZI | CGGCCG | 1 cut(s) | 127 |
| BsuI | GTATCC | 2 cut(s) | 114, 1108 |
| BsuRI | GGCC | 6 cut(s) | 129, 795, 992, 1143, 1308, 1312 |
| BtgI | CCRYGG | 1 cut(s) | 59 |
| BtsCI | GGATG | 4 cut(s) | 1945, 2101, 2251, 2310 |
| BtsI | GCAGTG | 1 cut(s) | 1060 |
| BtsIMutI | CAGTG | 4 cut(s) | 570, 642, 1060, 2229 |
| BveI | ACCTGC | 1 cut(s) | 1475 |
| Cac8I | GCNNGC | 6 cut(s) | 564, 568, 1310, 1784, 1847, 1851 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1832, 2066 |
| CciI | TCATGA | 1 cut(s) | 1345 |
| CfoI | GCGC | 3 cut(s) | 86, 2084, 2286 |
| Cfr10I | RCCGGY | 2 cut(s) | 1308, 1934 |
| Cfr13I | GGNCC | 5 cut(s) | 246, 731, 794, 991, 1076 |
| Csp6I | GTAC | 4 cut(s) | 2214, 2416, 2426, 2503 |
| CspAI | ACCGGT | 1 cut(s) | 1934 |
| CviAII | CATG | 7 cut(s) | 60, 67, 512, 821, 892, 1346, 1639 |
| CviQI | GTAC | 4 cut(s) | 2214, 2416, 2426, 2503 |
| DdeI | CTNAG | 3 cut(s) | 318, 537, 2119 |
| DraI | TTTAAA | 1 cut(s) | 216 |
| EaeI | YGGCCR | 2 cut(s) | 127, 1141 |
| EagI | CGGCCG | 1 cut(s) | 127 |
| Eam1104I | CTCTTC | 1 cut(s) | 600 |
| EarI | CTCTTC | 1 cut(s) | 600 |
| EciI | GGCGGA | 1 cut(s) | 14 |
| Ecl136II | GAGCTC | 1 cut(s) | 1159 |
| EclXI | CGGCCG | 1 cut(s) | 127 |
| Eco130I | CCWWGG | 1 cut(s) | 59 |
| Eco24I | GRGCYC | 1 cut(s) | 1161 |
| Eco47I | GGWCC | 3 cut(s) | 246, 731, 1076 |
| Eco52I | CGGCCG | 1 cut(s) | 127 |
| Eco53kI | GAGCTC | 1 cut(s) | 1159 |
| Eco57I | CTGAAG | 5 cut(s) | 594, 664, 1563, 2016, 2109 |
| Eco91I | GGTNACC | 3 cut(s) | 972, 1622, 1814 |
| EcoICRI | GAGCTC | 1 cut(s) | 1159 |
| EcoO65I | GGTNACC | 3 cut(s) | 972, 1622, 1814 |
| EcoRII | CCWGG | 1 cut(s) | 1143 |
| EcoT14I | CCWWGG | 1 cut(s) | 59 |
| EcoT38I | GRGCYC | 1 cut(s) | 1161 |
| ErhI | CCWWGG | 1 cut(s) | 59 |
| FaeI | CATG | 7 cut(s) | 63, 70, 515, 824, 895, 1349, 1642 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1934, 1966 |
| FaqI | GGGAC | 2 cut(s) | 108, 1721 |
| FatI | CATG | 7 cut(s) | 59, 66, 511, 820, 891, 1345, 1638 |
| FauI | CCCGC | 1 cut(s) | 571 |
| FbaI | TGATCA | 2 cut(s) | 823, 1429 |
| FblI | GTMKAC | 2 cut(s) | 1443, 1998 |
| FokI | GGATG | 4 cut(s) | 1932, 2088, 2258, 2297 |
| FriOI | GRGCYC | 1 cut(s) | 1161 |
| FseI | GGCCGGCC | 1 cut(s) | 1312 |
| GlaI | GCGC | 3 cut(s) | 85, 2083, 2285 |
| GsuI | CTGGAG | 2 cut(s) | 549, 2205 |
| HaeII | RGCGCY | 2 cut(s) | 87, 2287 |
| HaeIII | GGCC | 6 cut(s) | 129, 795, 992, 1143, 1308, 1312 |
| HapII | CCGG | 4 cut(s) | 126, 1309, 1935, 2369 |
| HhaI | GCGC | 3 cut(s) | 86, 2084, 2286 |
| Hin1II | CATG | 7 cut(s) | 63, 70, 515, 824, 895, 1349, 1642 |
| Hin6I | GCGC | 3 cut(s) | 84, 2082, 2284 |
| HinP1I | GCGC | 3 cut(s) | 84, 2082, 2284 |
| HincII | GTYRAC | 1 cut(s) | 1999 |
| HindII | GTYRAC | 1 cut(s) | 1999 |
| HindIII | AAGCTT | 2 cut(s) | 650, 2028 |
| HpaII | CCGG | 4 cut(s) | 126, 1309, 1935, 2369 |
| HphI | GGTGA | 7 cut(s) | 48, 255, 966, 1616, 1623, 1808, 1967 |
| Hpy166II | GTNNAC | 5 cut(s) | 158, 517, 1444, 1678, 1999 |
| Hpy8I | GTNNAC | 5 cut(s) | 158, 517, 1444, 1678, 1999 |
| Hpy99I | CGWCG | 4 cut(s) | 95, 156, 1048, 2414 |
| HpyAV | CCTTC | 9 cut(s) | 199, 867, 1089, 1105, 1160, 1298, 1538, 2150, 2396 |
| HpyCH4III | ACNGT | 9 cut(s) | 379, 403, 670, 1100, 1282, 1764, 2133, 2395, 2430 |
| HpyCH4IV | ACGT | 4 cut(s) | 101, 786, 2019, 2074 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 885, 940, 1842, 2225, 2290 |
| HpyF3I | CTNAG | 3 cut(s) | 318, 537, 2119 |
| HpySE526I | ACGT | 4 cut(s) | 101, 786, 2019, 2074 |
| Hsp92II | CATG | 7 cut(s) | 63, 70, 515, 824, 895, 1349, 1642 |
| HspAI | GCGC | 3 cut(s) | 84, 2082, 2284 |
| Kpn2I | TCCGGA | 1 cut(s) | 2368 |
| KroI | GCCGGC | 1 cut(s) | 1308 |
| KroNI | GCCGGC | 1 cut(s) | 1310 |
| Ksp22I | TGATCA | 2 cut(s) | 823, 1429 |
| LmnI | GCTCC | 3 cut(s) | 292, 822, 2224 |
| Lsp1109I | GCAGC | 5 cut(s) | 73, 232, 673, 1540, 1873 |
| LweI | GCATC | 5 cut(s) | 897, 1391, 1954, 2137, 2319 |
| MaeII | ACGT | 4 cut(s) | 101, 786, 2019, 2074 |
| MboII | GAAGA | 8 cut(s) | 28, 587, 587, 1102, 1105, 1999, 2495, 2498 |
| MflI | RGATCY | 1 cut(s) | 1563 |
| MhlI | GDGCHC | 2 cut(s) | 819, 1161 |
| MlsI | TGGCCA | 1 cut(s) | 1143 |
| MluNI | TGGCCA | 1 cut(s) | 1143 |
| MlyI | GAGTC | 4 cut(s) | 445, 923, 2337, 2469 |
| MmeI | TCCRAC | 2 cut(s) | 1591, 2368 |
| Mox20I | TGGCCA | 1 cut(s) | 1143 |
| MroI | TCCGGA | 1 cut(s) | 2368 |
| MroNI | GCCGGC | 1 cut(s) | 1308 |
| MroXI | GAANNNNTTC | 3 cut(s) | 594, 613, 2019 |
| MscI | TGGCCA | 1 cut(s) | 1143 |
| MseI | TTAA | 5 cut(s) | 215, 1032, 1644, 1730, 2054 |
| MslI | CAYNNNNRTG | 1 cut(s) | 766 |
| Msp20I | TGGCCA | 1 cut(s) | 1143 |
| MspI | CCGG | 4 cut(s) | 126, 1309, 1935, 2369 |
| MspR9I | CCNGG | 2 cut(s) | 126, 1145 |
| MvaI | CCWGG | 1 cut(s) | 1145 |
| MvnI | CGCG | 1 cut(s) | 1109 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 885, 940, 1842, 2225, 2290 |
| NaeI | GCCGGC | 1 cut(s) | 1310 |
| NciI | CCSGG | 1 cut(s) | 126 |
| NcoI | CCATGG | 1 cut(s) | 59 |
| NgoMIV | GCCGGC | 1 cut(s) | 1308 |
| NheI | GCTAGC | 1 cut(s) | 566 |
| NlaIII | CATG | 7 cut(s) | 63, 70, 515, 824, 895, 1349, 1642 |
| NlaIV | GGNNCC | 2 cut(s) | 288, 993 |
| NmeAIII | GCCGAG | 1 cut(s) | 33 |
| NmuCI | GTSAC | 8 cut(s) | 97, 448, 972, 1622, 1629, 1814, 2153, 2315 |
| PagI | TCATGA | 1 cut(s) | 1345 |
| PaqCI | CACCTGC | 1 cut(s) | 1475 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1333, 1882 |
| PdiI | GCCGGC | 1 cut(s) | 1310 |
| PdmI | GAANNNNTTC | 3 cut(s) | 594, 613, 2019 |
| PinAI | ACCGGT | 1 cut(s) | 1934 |
| Ple19I | CGATCG | 1 cut(s) | 111 |
| PleI | GAGTC | 4 cut(s) | 445, 922, 2336, 2468 |
| PpsI | GAGTC | 4 cut(s) | 445, 922, 2336, 2468 |
| PshAI | GACNNNNGTC | 2 cut(s) | 729, 970 |
| PsiI | TTATAA | 1 cut(s) | 1560 |
| Psp124BI | GAGCTC | 1 cut(s) | 1161 |
| Psp6I | CCWGG | 1 cut(s) | 1143 |
| PspEI | GGTNACC | 3 cut(s) | 972, 1622, 1814 |
| PspGI | CCWGG | 1 cut(s) | 1143 |
| PspN4I | GGNNCC | 2 cut(s) | 288, 993 |
| PspPI | GGNCC | 5 cut(s) | 246, 731, 794, 991, 1076 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2004, 2036 |
| PstI | CTGCAG | 1 cut(s) | 1472 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1832, 2066 |
| PsuI | RGATCY | 1 cut(s) | 1563 |
| PvuI | CGATCG | 1 cut(s) | 111 |
| RigI | GGCCGGCC | 1 cut(s) | 1312 |
| RsaI | GTAC | 4 cut(s) | 2215, 2417, 2427, 2504 |
| RsaNI | GTAC | 4 cut(s) | 2214, 2416, 2426, 2503 |
| RseI | CAYNNNNRTG | 1 cut(s) | 766 |
| SacI | GAGCTC | 1 cut(s) | 1161 |
| SalI | GTCGAC | 1 cut(s) | 1997 |
| SaqAI | TTAA | 5 cut(s) | 215, 1032, 1644, 1730, 2054 |
| Sau96I | GGNCC | 5 cut(s) | 246, 731, 794, 991, 1076 |
| ScaI | AGTACT | 2 cut(s) | 2417, 2504 |
| SchI | GAGTC | 4 cut(s) | 445, 923, 2337, 2469 |
| ScrFI | CCNGG | 2 cut(s) | 126, 1145 |
| SduI | GDGCHC | 2 cut(s) | 819, 1161 |
| SfaNI | GCATC | 5 cut(s) | 897, 1391, 1954, 2137, 2319 |
| SfcI | CTRYAG | 5 cut(s) | 1314, 1468, 2229, 2287, 2455 |
| SinI | GGWCC | 3 cut(s) | 246, 731, 1076 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 766 |
| SmlI | CTYRAG | 1 cut(s) | 623 |
| SmoI | CTYRAG | 1 cut(s) | 623 |
| SpeI | ACTAGT | 1 cut(s) | 470 |
| SsiI | CCGC | 8 cut(s) | 5, 25, 78, 81, 130, 368, 564, 1107 |
| SspI | AATATT | 1 cut(s) | 1981 |
| SstI | GAGCTC | 1 cut(s) | 1161 |
| StyD4I | CCNGG | 2 cut(s) | 124, 1143 |
| StyI | CCWWGG | 1 cut(s) | 59 |
| TaaI | ACNGT | 9 cut(s) | 379, 403, 670, 1100, 1282, 1764, 2133, 2395, 2430 |
| TaiI | ACGT | 4 cut(s) | 104, 789, 2022, 2077 |
| TaqI | TCGA | 9 cut(s) | 381, 873, 1046, 1155, 1336, 1893, 1998, 2356, 2409 |
| TaqII | GACCGA | 2 cut(s) | 719, 2172 |
| TatI | WGTACW | 3 cut(s) | 2213, 2415, 2502 |
| TauI | GCSGC | 5 cut(s) | 7, 81, 84, 132, 371 |
| Tru1I | TTAA | 5 cut(s) | 215, 1032, 1644, 1730, 2054 |
| Tru9I | TTAA | 5 cut(s) | 215, 1032, 1644, 1730, 2054 |
| TscAI | CASTG | 4 cut(s) | 577, 649, 1060, 2229 |
| TseFI | GTSAC | 8 cut(s) | 97, 448, 972, 1622, 1629, 1814, 2153, 2315 |
| TseI | GCWGC | 5 cut(s) | 86, 220, 686, 1553, 1861 |
| Tsp45I | GTSAC | 8 cut(s) | 97, 448, 972, 1622, 1629, 1814, 2153, 2315 |
| TspDTI | ATGAA | 7 cut(s) | 500, 603, 848, 1018, 1691, 2257, 2262 |
| TspGWI | ACGGA | 2 cut(s) | 1290, 2303 |
| TspRI | CASTG | 4 cut(s) | 577, 649, 1060, 2229 |
| VpaK11BI | GGWCC | 3 cut(s) | 246, 731, 1076 |
| XapI | RAATTY | 3 cut(s) | 661, 750, 2373 |
| XbaI | TCTAGA | 1 cut(s) | 1453 |
| XmiI | GTMKAC | 2 cut(s) | 1443, 1998 |
| XmnI | GAANNNNTTC | 3 cut(s) | 594, 613, 2019 |
| ZrmI | AGTACT | 2 cut(s) | 2417, 2504 |