AT2G18940

Pentatricopeptide repeat-containing protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
8203705 .. 8206478
2774 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G18940.1

Sequence Viewer

Length: 2469 bp
ATGGACGGAGCACTCTTCCCTCACAAACCTCCATACCCAATTCAATCCAAGAGACCTCCACCATCTCAATCCTCTAACCAATCTATCAAATTCAGTTCCGCTACTCTTCACTTACCTCCTCCTTCTCCTCCTTCTTTCCCTCTCGATTCTCTTCTTCACCATCTCGTTCACCTCTCTTCCCCGCCTCCTAGACACTCCAACTCCGCCGCCGCTCGTTTCCCTTCTCTCGAAGTCTCGACTGATTCATCATCGTCGAAACCCATTCTGGGTATTGAAATTGAGAACGAGAGAAATGGGTCTTTGAAACTCTTGTGTAAGAAAGAAGTTGTCTTGGTTAATTCCATTGTTGAACAGCCTTTGACTGGTTTGAGTAGGTTTTTTGATTCTGTGAAATCGGAATTGCTTAGAACTGATTTGGTTAGTTTGGTTAAGGGTCTAGATGATTCTGGGCATTGGGAAAGAGCTGTTTTTTTGTTTGAATGGTTAGTTTTGTCTTCAAATTCTGGAGCTTTGAAGCTAGATCATCAAGTTATCGAAATCTTTGTTAGGATTTTAGGTAGAGAATCTCAGTACTCTGTTGCAGCTAAGTTGCTCGATAAAATTCCTCTACAAGAATATCTCCTCGATGTTCGGGCTTACACGACGATCTTACATGCGTATTCACGGACTGGGAAGTATGAAAAGGCTATCGATTTGTTTGAGAGGATGAAAGAGATGGGTCCTTCACCTACTTTGGTGACTTACAATGTGATTCTCGATGTTTTCGGGAAAATGGGTCGATCTTGGCGGAAAATTCTAGGGGTTTTAGATGAAATGAGAAGCAAAGGATTGAAGTTTGATGAGTTTACTTGTAGTACTGTGCTCTCTGCTTGTGCAAGAGAAGGTTTGTTAAGAGAGGCCAAGGAGTTTTTCGCTGAACTTAAGTCATGCGGCTATGAACCTGGTACTGTTACGTACAATGCTTTGTTGCAAGTTTTTGGTAAAGCAGGAGTTTATACAGAAGCGTTGAGTGTTTTGAAAGAGATGGAGGAAAATAGCTGCCCAGCAGATTCTGTGACATATAATGAGCTTGTTGCTGCTTATGTTAGAGCTGGTTTTAGCAAGGAAGCTGCTGGTGTCATTGAGATGATGACGAAAAAGGGTGTAATGCCGAACGCAATCACTTATACTACAGTGATAGATGCATATGGAAAGGCGGGAAAGGAGGACGAGGCTTTGAAGCTGTTTTATAGTATGAAAGAAGCTGGTTGTGTTCCGAATACTTGCACCTACAATGCAGTGCTTAGTCTGTTGGGGAAGAAGTCGAGATCCAACGAAATGATAAAGATGTTATGTGATATGAAGTCTAATGGATGTTCCCCTAATCGTGCCACTTGGAACACAATGCTTGCTCTGTGTGGGAATAAGGGTATGGATAAGTTTGTGAACCGGGTGTTCCGTGAAATGAAGAGCTGCGGATTTGAACCTGATAGGGACACATTCAACACGCTGATCAGTGCCTATGGGCGATGTGGTTCAGAGGTTGATGCATCGAAAATGTATGGTGAGATGACAAGAGCAGGGTTCAACGCTTGCGTTACGACTTACAACGCGTTACTTAATGCCTTGGCAAGAAAAGGAGATTGGAGATCAGGCGAAAATGTGATTTCCGACATGAAAAGTAAAGGTTTCAAACCTACTGAAACATCTTATTCCTTGATGCTTCAGTGTTATGCTAAAGGAGGGAACTATCTAGGGATAGAGAGAATCGAGAATAGGATAAAGGAGGGCCAAATATTCCCGAGCTGGATGCTTTTGAGAACATTACTCCTCGCAAACTTTAAATGCCGAGCACTAGCAGGATCAGAGAGAGCATTCACATTGTTTAAAAAGCACGGATACAAACCCGACATGGTGATTTTCAACTCAATGCTCTCCATTTTCACGAGGAACAACATGTACGATCAAGCAGAGGGGATTCTCGAGTCTATCCGCGAGGATGGGCTAAGCCCGGATCTTGTAACCTACAACAGCCTGATGGACATGTACGTAAGAAGAGGAGAGTGTTGGAAAGCCGAAGAAATCCTCAAGACTCTAGAAAAATCGCAGTTAAAACCGGACCTGGTCTCTTACAACACGGTGATCAAAGGTTTCTGCAGAAGAGGGTTGATGCAAGAAGCGGTTAGGATGCTGTCTGAGATGACAGAGCGGGGAATCAGACCGTGCATTTTCACTTACAACACGTTTGTTTCGGGTTACACGGCGATGGGAATGTTTGCAGAGATAGAAGATGTGATTGAGTGCATGGCGAAGAATGATTGCAGACCAAATGAGCTGACTTTTAAAATGGTAGTAGATGGTTATTGCAGAGCAGGGAAGTATAGTGAAGCTATGGATTTTGTGTCCAAGATTAAGACCTTTGATCCTTGCTTCGATGATCAGTCTATTCAACGGCTTGCTCTCCGAGTACGTGAGAATTTAGAATCCTAA

Protein Analysis

822

Amino Acids

92.24

Weight (kDa)

8.36

Isoelectric Point (pI)

42.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 197 - 258 9e-15 Pentatricopeptide repeat domain
PPR_2 PF13041 209 - 256 3e-13 PPR repeat family
PPR PF01535 212 - 240 6.5e-08 PPR repeat
PPR_2 PF13041 243 - 293 2.4e-09 PPR repeat family
PPR_long PF17177 267 - 403 6e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 268 - 328 3.5e-11 Pentatricopeptide repeat domain
TPR_24 PF23276 283 - 360 9.4e-08 Fungal tetratrico peptide repeats
PPR_2 PF13041 314 - 355 1.8e-10 PPR repeat family
PPR PF01535 317 - 347 2.2e-06 PPR repeat
PPR_3 PF13812 337 - 398 1.2e-09 Pentatricopeptide repeat domain
PPR_2 PF13041 350 - 397 5.1e-11 PPR repeat family
TPR_24 PF23276 363 - 460 3.2e-08 Fungal tetratrico peptide repeats
PPR_1 PF12854 380 - 413 6e-09 PPR repeat
PPR_3 PF13812 385 - 433 7.5e-12 Pentatricopeptide repeat domain
PPR_2 PF13041 387 - 431 6.5e-12 PPR repeat family
PPR PF01535 387 - 417 2.3e-09 PPR repeat
PPR_long PF17177 404 - 505 6e-06 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 419 - 466 9.1e-12 PPR repeat family
PPR_3 PF13812 443 - 502 5.3e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 457 - 501 1e-08 PPR repeat family
PPR_3 PF13812 515 - 572 4.1e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 525 - 573 1e-11 PPR repeat family
PPR_3 PF13812 623 - 678 6.3e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 629 - 677 2.9e-09 PPR repeat family
PPR_2 PF13041 664 - 706 7.7e-08 PPR repeat family
PPR_1 PF12854 697 - 728 4.1e-12 PPR repeat
PPR_2 PF13041 699 - 737 7.7e-11 PPR repeat family
PPR PF01535 702 - 732 6.4e-09 PPR repeat
PPR_3 PF13812 723 - 777 3.1e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 734 - 783 1.5e-09 PPR repeat family
PPR_1 PF12854 766 - 796 5.5e-07 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014583)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18940
fragaria_vesca FvH4_4g07880
malus_domestica MD13G1249100.v1.1 MD16G1255600.v1.1
prunus_persica Prupe.3G037500_v2.0.a1
pyrus_communis pycom13g21970 pycom16g21670
rosa_chinensis RchiOBHm_Chr4g0401161
rosa_laevigata RLG00000009158
rosa_multiflora Rmu_sc0003257.1_g000006
rosa_roxburghii Rroxscaffold_5G00346010
rosa_rugosa Rorug04G0028400
rosa_samantha Rh4AG105900 Rh4BG100900 Rh4CG114600 Rh4DG098100
rosa_wichuraiana Rw4G008590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 212, 2188
AccII CGCG 2 cut(s) 1592, 1974
AclWI GGATC 4 cut(s) 1302, 1849, 2001, 2396
AcsI RAATTY 5 cut(s) 89, 499, 600, 792, 2455
AcuI CTGAAG 1 cut(s) 1688
AfaI GTAC 7 cut(s) 572, 856, 946, 956, 1940, 2027, 2448
AfiI CCNNNNNNNGG 2 cut(s) 266, 362
AflII CTTAAG 1 cut(s) 920
AflIII ACRYGT 4 cut(s) 1590, 1935, 2022, 2220
AjnI CCWGG 2 cut(s) 940, 2100
AjuI GAANNNNNNNTTGG 4 cut(s) 893, 925, 1606, 1638
Alw21I GWGCWC 3 cut(s) 13, 864, 1834
Alw26I GTCTC 3 cut(s) 46, 238, 2110
AlwI GGATC 4 cut(s) 1302, 1849, 2001, 2396
AlwNI CAGNNNCTG 1 cut(s) 1052
Ama87I CYCGRG 2 cut(s) 1780, 1961
AoxI GGCC 2 cut(s) 897, 1768
ApeKI GCWGC 5 cut(s) 581, 1038, 1076, 1109, 1452
ApoI RAATTY 5 cut(s) 89, 499, 600, 792, 2455
AspS9I GGNCC 3 cut(s) 719, 1768, 2098
AsuC2I CCSGG 2 cut(s) 1430, 1991
AsuHPI GGTGA 7 cut(s) 149, 161, 717, 748, 1556, 1906, 2131
AvaI CYCGRG 2 cut(s) 1780, 1961
AvaII GGWCC 2 cut(s) 719, 2098
BauI CACGAG 1 cut(s) 1924
BbsI GAAGAC 1 cut(s) 486
Bbv12I GWGCWC 3 cut(s) 13, 864, 1834
BbvI GCAGC 5 cut(s) 593, 1025, 1063, 1096, 1439
BccI CCATC 8 cut(s) 70, 168, 709, 1018, 1973, 2011, 2239, 2330
BceAI ACGGC 2 cut(s) 2256, 2447
BcgI CGANNNNNNTGC 2 cut(s) 1771, 1805
BciT130I CCWGG 2 cut(s) 942, 2102
BciVI GTATCC 1 cut(s) 1871
BclI TGATCA 3 cut(s) 1491, 2121, 2416
BcnI CCSGG 2 cut(s) 1430, 1991
BcoDI GTCTC 3 cut(s) 46, 238, 2110
BfaI CTAG 7 cut(s) 189, 437, 518, 797, 1733, 1835, 2075
BfmI CTRYAG 2 cut(s) 1170, 2134
BfrI CTTAAG 1 cut(s) 920
BfuI GTATCC 1 cut(s) 1871
BisI GCNGC 8 cut(s) 207, 210, 582, 931, 1039, 1077, 1110, 1453
BlpI GCTNAGC 1 cut(s) 1985
BlsI GCNGC 8 cut(s) 208, 211, 583, 932, 1040, 1078, 1111, 1454
BmcAI AGTACT 2 cut(s) 572, 856
Bme1390I CCNGG 4 cut(s) 942, 1430, 1991, 2102
Bme18I GGWCC 2 cut(s) 719, 2098
BmeT110I CYCGRG 2 cut(s) 1780, 1961
BmgT120I GGNCC 3 cut(s) 719, 1768, 2098
BmiI GGNNCC 1 cut(s) 720
BmrFI CCNGG 4 cut(s) 942, 1430, 1991, 2102
BmrI ACTGGG 1 cut(s) 678
BmsI GCATC 7 cut(s) 1171, 1516, 1538, 1689, 1779, 2139, 2157
BmuI ACTGGG 1 cut(s) 678
BpiI GAAGAC 1 cut(s) 486
BpmI CTGGAG 1 cut(s) 525
Bpu1102I GCTNAGC 1 cut(s) 1985
BpuEI CTTGAG 1 cut(s) 2051
BpuMI CCSGG 2 cut(s) 1430, 1991
Bsa29I ATCGAT 1 cut(s) 690
BsaAI YACGTR 3 cut(s) 954, 2029, 2450
BsaI GGTCTC 2 cut(s) 46, 2110
BsaJI CCNNGG 2 cut(s) 900, 1605
BsaWI WCCGGW 1 cut(s) 2095
BsaXI ACNNNNNCTCC 2 cut(s) 185, 215
Bsc4I CCNNNNNNNGG 2 cut(s) 266, 362
Bse1I ACTGG 2 cut(s) 367, 673
BseBI CCWGG 2 cut(s) 942, 2102
BseCI ATCGAT 1 cut(s) 690
BseDI CCNNGG 2 cut(s) 900, 1605
BseGI GGATG 5 cut(s) 711, 1358, 1794, 1984, 2172
BseLI CCNNNNNNNGG 2 cut(s) 266, 362
BseMII CTCAG 2 cut(s) 581, 2166
BseNI ACTGG 2 cut(s) 367, 673
BseRI GAGGAG 5 cut(s) 108, 117, 611, 1799, 2052
BseXI GCAGC 5 cut(s) 593, 1025, 1063, 1096, 1439
BseYI CCCAGC 1 cut(s) 1042
Bsh1236I CGCG 2 cut(s) 1592, 1974
BshFI GGCC 2 cut(s) 899, 1770
BshVI ATCGAT 1 cut(s) 690
BsiHKAI GWGCWC 3 cut(s) 13, 864, 1834
BsiHKCI CYCGRG 2 cut(s) 1780, 1961
BsiSI CCGG 3 cut(s) 1429, 1991, 2096
BslFI GGGAC 1 cut(s) 1487
BslI CCNNNNNNNGG 2 cut(s) 266, 362
BsmAI GTCTC 3 cut(s) 46, 238, 2110
BsmFI GGGAC 1 cut(s) 1487
BsmI GAATGC 1 cut(s) 1853
BsnI GGCC 2 cut(s) 899, 1770
Bso31I GGTCTC 2 cut(s) 46, 2110
BsoBI CYCGRG 2 cut(s) 1780, 1961
Bsp1286I GDGCHC 3 cut(s) 13, 864, 1834
Bsp1720I GCTNAGC 1 cut(s) 1985
BspANI GGCC 2 cut(s) 899, 1770
BspCNI CTCAG 2 cut(s) 580, 2167
BspDI ATCGAT 1 cut(s) 690
BspFNI CGCG 2 cut(s) 1592, 1974
BspLI GGNNCC 1 cut(s) 720
BspMAI CTGCAG 1 cut(s) 2138
BspPI GGATC 4 cut(s) 1302, 1849, 2001, 2396
BspQI GCTCTTC 1 cut(s) 1442
BspTI CTTAAG 1 cut(s) 920
BspTNI GGTCTC 2 cut(s) 46, 2110
BsrBI CCGCTC 2 cut(s) 212, 2188
BsrI ACTGG 2 cut(s) 367, 673
BssECI CCNNGG 2 cut(s) 900, 1605
BssSI CACGAG 1 cut(s) 1924
BssT1I CCWWGG 2 cut(s) 900, 1605
Bst2BI CACGAG 1 cut(s) 1924
Bst2UI CCWGG 2 cut(s) 942, 2102
Bst4CI ACNGT 5 cut(s) 859, 949, 1174, 2119, 2202
Bst6I CTCTTC 7 cut(s) 20, 111, 156, 181, 1442, 2029, 2134
BstAFI CTTAAG 1 cut(s) 920
BstBAI YACGTR 3 cut(s) 954, 2029, 2450
BstC8I GCNNGC 3 cut(s) 1389, 1573, 2436
BstDEI CTNAG 6 cut(s) 404, 567, 585, 1283, 1985, 2175
BstF5I GGATG 5 cut(s) 711, 1358, 1794, 1984, 2172
BstFNI CGCG 2 cut(s) 1592, 1974
BstMAI GTCTC 3 cut(s) 46, 238, 2110
BstNI CCWGG 2 cut(s) 942, 2102
BstNSI RCATGY 3 cut(s) 656, 1939, 2026
BstSCI CCNGG 4 cut(s) 940, 1428, 1989, 2100
BstSFI CTRYAG 2 cut(s) 1170, 2134
BstSNI TACGTA 2 cut(s) 954, 2029
BstUI CGCG 2 cut(s) 1592, 1974
BstV1I GCAGC 5 cut(s) 593, 1025, 1063, 1096, 1439
BstV2I GAAGAC 1 cut(s) 486
BstX2I RGATCY 2 cut(s) 1307, 1993
BstYI RGATCY 2 cut(s) 1307, 1993
Bsu15I ATCGAT 1 cut(s) 690
BsuI GTATCC 1 cut(s) 1871
BsuRI GGCC 2 cut(s) 899, 1770
BsuTUI ATCGAT 1 cut(s) 690
BtgZI GCGATG 2 cut(s) 1522, 2258
BtsCI GGATG 5 cut(s) 711, 1358, 1794, 1984, 2172
BtsI GCAGTG 1 cut(s) 1284
BtsIMutI CAGTG 4 cut(s) 1179, 1284, 1501, 1712
Cac8I GCNNGC 3 cut(s) 1389, 1573, 2436
CaiI CAGNNNCTG 1 cut(s) 1052
Cfr13I GGNCC 3 cut(s) 719, 1768, 2098
ClaI ATCGAT 1 cut(s) 690
CsiI ACCWGGT 2 cut(s) 940, 2100
Csp6I GTAC 7 cut(s) 571, 855, 945, 955, 1939, 2026, 2447
CviAII CATG 7 cut(s) 653, 927, 1654, 1891, 1936, 2023, 2284
CviQI GTAC 7 cut(s) 571, 855, 945, 955, 1939, 2026, 2447
DdeI CTNAG 6 cut(s) 404, 567, 585, 1283, 1985, 2175
DraI TTTAAA 3 cut(s) 1822, 1867, 2323
Eam1104I CTCTTC 7 cut(s) 20, 111, 156, 181, 1442, 2029, 2134
EarI CTCTTC 7 cut(s) 20, 111, 156, 181, 1442, 2029, 2134
EciI GGCGGA 2 cut(s) 193, 802
Eco105I TACGTA 2 cut(s) 954, 2029
Eco130I CCWWGG 2 cut(s) 900, 1605
Eco31I GGTCTC 2 cut(s) 46, 2110
Eco47I GGWCC 2 cut(s) 719, 2098
Eco57I CTGAAG 1 cut(s) 1688
Eco88I CYCGRG 2 cut(s) 1780, 1961
EcoO109I RGGNCCY 1 cut(s) 719
EcoRII CCWGG 2 cut(s) 940, 2100
EcoT14I CCWWGG 2 cut(s) 900, 1605
EcoT22I ATGCAT 2 cut(s) 1186, 1531
ErhI CCWWGG 2 cut(s) 900, 1605
FaeI CATG 7 cut(s) 656, 930, 1657, 1894, 1939, 2026, 2287
FaqI GGGAC 1 cut(s) 1487
FatI CATG 7 cut(s) 652, 926, 1653, 1890, 1935, 2022, 2283
FauI CCCGC 3 cut(s) 189, 1189, 2181
FauNDI CATATG 1 cut(s) 1186
FbaI TGATCA 3 cut(s) 1491, 2121, 2416
Fnu4HI GCNGC 8 cut(s) 207, 210, 582, 931, 1039, 1077, 1110, 1453
FokI GGATG 5 cut(s) 718, 1365, 1801, 1991, 2179
Fsp4HI GCNGC 8 cut(s) 207, 210, 582, 931, 1039, 1077, 1110, 1453
FspBI CTAG 7 cut(s) 189, 437, 518, 797, 1733, 1835, 2075
GluI GCNGC 8 cut(s) 207, 210, 582, 931, 1039, 1077, 1110, 1453
GsaI CCCAGC 1 cut(s) 1046
GsuI CTGGAG 1 cut(s) 525
HaeIII GGCC 2 cut(s) 899, 1770
HapII CCGG 3 cut(s) 1429, 1991, 2096
Hin1II CATG 7 cut(s) 656, 930, 1657, 1894, 1939, 2026, 2287
HpaII CCGG 3 cut(s) 1429, 1991, 2096
HphI GGTGA 7 cut(s) 149, 161, 717, 748, 1556, 1906, 2131
Hpy166II GTNNAC 3 cut(s) 169, 846, 1426
Hpy188I TCNGA 8 cut(s) 397, 1257, 1519, 1651, 1846, 2176, 2198, 2444
Hpy8I GTNNAC 3 cut(s) 169, 846, 1426
Hpy99I CGWCG 2 cut(s) 256, 646
HpyAV CCTTC 5 cut(s) 132, 141, 231, 732, 875
HpyCH4III ACNGT 5 cut(s) 859, 949, 1174, 2119, 2202
HpyCH4IV ACGT 4 cut(s) 953, 2028, 2222, 2449
HpyF3I CTNAG 6 cut(s) 404, 567, 585, 1283, 1985, 2175
HpySE526I ACGT 4 cut(s) 953, 2028, 2222, 2449
Hsp92II CATG 7 cut(s) 656, 930, 1657, 1894, 1939, 2026, 2287
Ksp22I TGATCA 3 cut(s) 1491, 2121, 2416
LguI GCTCTTC 1 cut(s) 1442
LmnI GCTCC 2 cut(s) 8, 506
Lsp1109I GCAGC 5 cut(s) 593, 1025, 1063, 1096, 1439
LweI GCATC 7 cut(s) 1171, 1516, 1538, 1689, 1779, 2139, 2157
MabI ACCWGGT 2 cut(s) 940, 2100
MaeI CTAG 7 cut(s) 189, 437, 518, 797, 1733, 1835, 2075
MaeII ACGT 4 cut(s) 953, 2028, 2222, 2449
MaeIII GTNAC 7 cut(s) 736, 949, 1054, 1576, 1593, 1999, 2234
MbiI CCGCTC 2 cut(s) 212, 2188
MflI RGATCY 2 cut(s) 1307, 1993
MhlI GDGCHC 3 cut(s) 13, 864, 1834
MluCI AATT 9 cut(s) 39, 89, 276, 337, 398, 499, 600, 792, 2455
MluI ACGCGT 1 cut(s) 1590
MlyI GAGTC 2 cut(s) 1973, 2065
MmeI TCCRAC 4 cut(s) 222, 1335, 1674, 2027
Mph1103I ATGCAT 2 cut(s) 1186, 1531
MslI CAYNNNNRTG 2 cut(s) 1124, 2243
MspCI CTTAAG 1 cut(s) 920
MspI CCGG 3 cut(s) 1429, 1991, 2096
MspR9I CCNGG 4 cut(s) 942, 1430, 1991, 2102
Mva1269I GAATGC 1 cut(s) 1853
MvaI CCWGG 2 cut(s) 942, 2102
MvnI CGCG 2 cut(s) 1592, 1974
NciI CCSGG 2 cut(s) 1430, 1991
NdeI CATATG 1 cut(s) 1186
NlaIII CATG 7 cut(s) 656, 930, 1657, 1894, 1939, 2026, 2287
NlaIV GGNNCC 1 cut(s) 720
NmeAIII GCCGAG 1 cut(s) 1853
NmuCI GTSAC 2 cut(s) 736, 1054
NsiI ATGCAT 2 cut(s) 1186, 1531
NspI RCATGY 3 cut(s) 656, 1939, 2026
PaeR7I CTCGAG 1 cut(s) 1961
PciI ACATGT 2 cut(s) 1935, 2022
PciSI GCTCTTC 1 cut(s) 1442
PctI GAATGC 1 cut(s) 1853
PflFI GACNNNGTC 1 cut(s) 2102
PkrI GCNGC 8 cut(s) 208, 211, 583, 932, 1040, 1078, 1111, 1454
PleI GAGTC 2 cut(s) 1972, 2065
PpsI GAGTC 2 cut(s) 1972, 2065
Ppu21I YACGTR 3 cut(s) 954, 2029, 2450
PpuMI RGGWCCY 1 cut(s) 719
PscI ACATGT 2 cut(s) 1935, 2022
Psp5II RGGWCCY 1 cut(s) 719
Psp6I CCWGG 2 cut(s) 940, 2100
PspFI CCCAGC 1 cut(s) 1042
PspGI CCWGG 2 cut(s) 940, 2100
PspN4I GGNNCC 1 cut(s) 720
PspPI GGNCC 3 cut(s) 719, 1768, 2098
PspPPI RGGWCCY 1 cut(s) 719
PsrI GAACNNNNNNTAC 2 cut(s) 1922, 1954
PstI CTGCAG 1 cut(s) 2138
PstNI CAGNNNCTG 1 cut(s) 1052
PsuI RGATCY 2 cut(s) 1307, 1993
PsyI GACNNNGTC 1 cut(s) 2102
RsaI GTAC 7 cut(s) 572, 856, 946, 956, 1940, 2027, 2448
RsaNI GTAC 7 cut(s) 571, 855, 945, 955, 1939, 2026, 2447
RseI CAYNNNNRTG 2 cut(s) 1124, 2243
SapI GCTCTTC 1 cut(s) 1442
SatI GCNGC 8 cut(s) 207, 210, 582, 931, 1039, 1077, 1110, 1453
Sau96I GGNCC 3 cut(s) 719, 1768, 2098
ScaI AGTACT 2 cut(s) 572, 856
SchI GAGTC 2 cut(s) 1973, 2065
ScrFI CCNGG 4 cut(s) 942, 1430, 1991, 2102
SduI GDGCHC 3 cut(s) 13, 864, 1834
SexAI ACCWGGT 2 cut(s) 940, 2100
SfaNI GCATC 7 cut(s) 1171, 1516, 1538, 1689, 1779, 2139, 2157
SfcI CTRYAG 2 cut(s) 1170, 2134
Sfr274I CTCGAG 1 cut(s) 1961
SinI GGWCC 2 cut(s) 719, 2098
SlaI CTCGAG 1 cut(s) 1961
SmiMI CAYNNNNRTG 2 cut(s) 1124, 2243
SmlI CTYRAG 3 cut(s) 920, 1961, 2066
SmoI CTYRAG 3 cut(s) 920, 1961, 2066
SnaBI TACGTA 2 cut(s) 954, 2029
Sse9I AATT 9 cut(s) 39, 89, 276, 337, 398, 499, 600, 792, 2455
SspI AATATT 1 cut(s) 1776
SspMI CTAG 7 cut(s) 189, 437, 518, 797, 1733, 1835, 2075
StyD4I CCNGG 4 cut(s) 940, 1428, 1989, 2100
StyI CCWWGG 2 cut(s) 900, 1605
TaaI ACNGT 5 cut(s) 859, 949, 1174, 2119, 2202
TaiI ACGT 4 cut(s) 956, 2031, 2225, 2452
TasI AATT 9 cut(s) 39, 89, 276, 337, 398, 499, 600, 792, 2455
TatI WGTACW 2 cut(s) 570, 854
TauI GCSGC 3 cut(s) 209, 212, 933
TscAI CASTG 4 cut(s) 1179, 1284, 1501, 1712
TseFI GTSAC 2 cut(s) 736, 1054
TseI GCWGC 5 cut(s) 581, 1038, 1076, 1109, 1452
Tsp45I GTSAC 2 cut(s) 736, 1054
TspDTI ATGAA 9 cut(s) 234, 693, 722, 825, 951, 1250, 1355, 1460, 1670
TspGWI ACGGA 4 cut(s) 21, 679, 1427, 1890
TspRI CASTG 4 cut(s) 1179, 1284, 1501, 1712
Tth111I GACNNNGTC 1 cut(s) 2102
Vha464I CTTAAG 1 cut(s) 920
VpaK11BI GGWCC 2 cut(s) 719, 2098
XapI RAATTY 5 cut(s) 89, 499, 600, 792, 2455
XbaI TCTAGA 2 cut(s) 436, 2074
XceI RCATGY 3 cut(s) 656, 1939, 2026
XhoI CTCGAG 1 cut(s) 1961
XspI CTAG 7 cut(s) 189, 437, 518, 797, 1733, 1835, 2075
ZrmI AGTACT 2 cut(s) 572, 856
Zsp2I ATGCAT 2 cut(s) 1186, 1531
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.