AT2G19540

Glutamate-rich WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0011879
Physical Location & Seq
Forward (+)
8461748 .. 8464534
2787 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G19540.1

Sequence Viewer

Length: 1410 bp
ATGGGTCGCAACGTCAAAACCAAGGCAAAGAGGAAGAACAAGAAGAAAGCAGAGGCGTCTTCTTCCGAGATACCATCGATACCAACTAGGGTTTGGCAACCAGGTGTTGATACCCTTGAAGATGGAGAAGAACTTCAGTGTGACCCTTCTGCTTATAATTCTCTCCATGGCTTCCATGTTGGTTGGCCCTGTCTGAGCTTTGACATTTTAGGTGATAAGTTGGGTTTGAACCGAACTGAGTTTCCTCACACACTTTATATGGTGGCTGGGACTCAGGCTGAGAAAGCAGCTCATAACTCCATAGGGTTATTTAAAATCACCAACGTATCTGGTAAGAGACGTGATGTTGTGCCTAAGACATTTGGCAATGGTGAGGATGAGGATGAGGATGACGAAGATGACAGTGACAGCGATGATGATGACGGAGATGAAGCTTCTAAAACTCCAAATATTCAGGTTCGAAGGGTTGCTCACCATGGATGTGTTAACCGTATACGTGCAATGCCACAAAACTCTCATATCTGTGTCTCTTGGGCAGATTCTGGTCATGTACAGGTCTGGGACATGAGCTCTCATCTTAATGCTTTAGCCGAATCAGAAACAGAGGGTAAAGATGGAACTTCACCGGTTCTTAACCAAGCACCCTTGGTTAACTTTTCTGGTCACAAAGATGAAGGCTATGCTATAGACTGGAGTCCTGCAACCGCTGGAAGACTTCTTTCCGGGGACTGCAAGAGTATGATTCACCTGTGGGAGCCAGCTTCTGGTTCATGGGCTGTTGATCCTATTCCGTTCGCTGGACACACTGCAAGTGTTGAAGATTTACAATGGAGTCCAGCCGAAGAAAACGTGTTTGCCTCATGTTCTGTGGATGGGAGTGTTGCAGTCTGGGATATTCGACTTGGGAAGTCCCCTGCACTATCTTTCAAGGCACATAACGCAGATGTGAATGTCATCTCATGGAACAGGCTGGCTAGTTGCATGTTGGCCTCAGGAAGTGATGACGGGACATTCTCCATCCGTGATCTTAGACTGATCAAAGGTGGAGATGCTGTGGTAGCACATTTTGAGTACCATAAGCATCCTATTACGTCAATTGAATGGAGCGCTCATGAAGCTTCGACACTTGCAGTCACTTCCGGTGATAACCAGCTCACGATATGGGATCTATCCTTAGAGAAGGATGAAGAAGAAGAGGCAGAGTTCAATGCACAGACCAAGGAACTAGTCAACACACCTCAAGACTTGCCTCCTCAGCTTCTCTTTGTTCACCAAGGACAAAAAGATCTGAAGGAACTTCACTGGCACAACCAGATTCCGGGGATGATCATCTCAACTGCTGGTGATGGTTTCAACATCTTAATGCCTTACAACATTCAGAACACGCTTCCGTCTGAGCTACCAGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CAF1C_H4-bd WD40

Protein Analysis

469

Amino Acids

51.4

Weight (kDa)

4.89

Isoelectric Point (pI)

47.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CAF1C_H4-bd PF12265 43 - 109 2.5e-12 Histone-binding protein RBBP4 or subunit C of CAF1 complex
Beta-prop_WDR3_1st PF25173 157 - 301 2.5e-10 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 157 - 303 3.6e-09 WDR5 beta-propeller domain
WD40_CDC20-Fz PF24807 216 - 332 1e-12 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 222 - 304 1.6e-12 THOC3 beta-propeller domain
WD40_Prp19 PF24814 228 - 344 5.7e-09 Prp19 WD40 domain
Beta-prop_WDR19_1st PF23389 229 - 391 2.5e-07 WDR19 first beta-propeller
WD40_Gbeta PF25391 249 - 389 1.4e-09 G protein beta WD-40 repeat protein
Beta-prop_TEP1_2nd PF25047 265 - 391 2.4e-06 TEP-1 second beta-propeller
Beta-prop_CAF1B_HIR1 PF24105 265 - 335 9.5e-07 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_1st PF25173 265 - 394 4.5e-16 WDR3 first beta-propeller domain
WDR55 PF24796 266 - 398 3.3e-11 WDR55
Beta-prop_EIPR1 PF23609 266 - 338 4.7e-06 EIPR1 beta-propeller
Beta-prop_WDR5 PF25175 266 - 391 2.2e-16 WDR5 beta-propeller domain
Beta-prop_RIG_2nd PF23775 267 - 312 2.9e-06 RIG second beta-propeller
Beta-prop_EML_2 PF23414 281 - 396 2.9e-08 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_THOC3 PF25174 308 - 435 1.2e-09 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 327 - 414 2.2e-08 CDC20/Fizzy WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011879)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G19540
fragaria_vesca FvH4_1g07300
malus_domestica MD02G1077800.v1.1 MD15G1206400.v1.1
prunus_persica Prupe.7G211000_v2.0.a1 Prupe.7G211000_v2.0.a1 Prupe.7G211000_v2.0.a1
pyrus_communis pycom02g06200
rosa_chinensis RchiOBHm_Chr2g0093231
rosa_laevigata RLG00000016380
rosa_multiflora Rmu_sc0003724.1_g000014 Rmu_sc0037462.1_g000001
rosa_roxburghii Rroxscaffold_2G00148390
rosa_rugosa Rorug02G0033700
rosa_samantha Rh2AG079900 Rh2BG080800 Rh2CG083200 Rh2DG078800
rosa_wichuraiana Rw2G006710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 156
AccB7I CCANNNNNTGG 1 cut(s) 764
AccI GTMKAC 1 cut(s) 493
AciI CCGC 1 cut(s) 705
AclWI GGATC 2 cut(s) 776, 1173
AcuI CTGAAG 2 cut(s) 119, 1310
AcyI GRCGYC 1 cut(s) 56
AfaI GTAC 2 cut(s) 552, 1073
AfeI AGCGCT 1 cut(s) 1108
AfiI CCNNNNNNNGG 3 cut(s) 764, 797, 1318
AflIII ACRYGT 1 cut(s) 849
AgeI ACCGGT 1 cut(s) 625
AgsI TTSAA 7 cut(s) 119, 229, 818, 928, 1100, 1207, 1354
AhlI ACTAGT 1 cut(s) 1225
AjiI CACGTC 1 cut(s) 341
AjnI CCWGG 1 cut(s) 100
AloI GAACNNNNNNTCC 2 cut(s) 226, 258
AluBI AGCT 9 cut(s) 198, 290, 434, 570, 761, 1118, 1153, 1258, 1399
AluI AGCT 9 cut(s) 198, 290, 434, 570, 761, 1118, 1153, 1258, 1399
Alw21I GWGCWC 1 cut(s) 572
Alw26I GTCTC 2 cut(s) 331, 532
AlwI GGATC 2 cut(s) 776, 1173
AlwNI CAGNNNCTG 2 cut(s) 542, 764
Aor51HI AGCGCT 1 cut(s) 1108
AoxI GGCC 2 cut(s) 185, 987
ApeKI GCWGC 1 cut(s) 287
AsiGI ACCGGT 1 cut(s) 625
Asp700I GAANNNNTTC 1 cut(s) 132
AspLEI GCGC 1 cut(s) 1109
AspS9I GGNCC 1 cut(s) 186
AsuC2I CCSGG 2 cut(s) 724, 1320
AsuHPI GGTGA 9 cut(s) 224, 310, 383, 464, 615, 737, 1154, 1262, 1355
AsuII TTCGAA 1 cut(s) 460
AxyI CCTNAGG 1 cut(s) 991
BaeI ACNNNNGTAYC 2 cut(s) 309, 342
BanII GRGCYC 1 cut(s) 572
BbsI GAAGAC 2 cut(s) 51, 718
Bbv12I GWGCWC 1 cut(s) 572
BbvCI CCTCAGC 1 cut(s) 1254
BbvI GCAGC 1 cut(s) 299
BccI CCATC 6 cut(s) 82, 116, 608, 866, 1025, 1340
BciT130I CCWGG 1 cut(s) 102
BclI TGATCA 2 cut(s) 1035, 1326
BcnI CCSGG 2 cut(s) 724, 1320
BcoDI GTCTC 2 cut(s) 331, 532
BcuI ACTAGT 1 cut(s) 1225
BfaI CTAG 3 cut(s) 87, 975, 1226
BfmI CTRYAG 1 cut(s) 684
BfoI RGCGCY 1 cut(s) 1110
BglII AGATCT 1 cut(s) 1285
BisI GCNGC 1 cut(s) 288
BlsI GCNGC 1 cut(s) 289
Bme1390I CCNGG 3 cut(s) 102, 724, 1320
BmgBI CACGTC 1 cut(s) 341
BmgT120I GGNCC 1 cut(s) 186
BmiI GGNNCC 1 cut(s) 756
BmrFI CCNGG 3 cut(s) 102, 724, 1320
BmsI GCATC 2 cut(s) 1039, 1090
BoxI GACNNNNGTC 1 cut(s) 693
BpiI GAAGAC 2 cut(s) 51, 718
BpmI CTGGAG 1 cut(s) 712
Bpu10I CCTNAGC 1 cut(s) 1254
Bpu14I TTCGAA 1 cut(s) 460
BpuEI CTTGAG 1 cut(s) 1224
BpuMI CCSGG 2 cut(s) 724, 1320
Bsa29I ATCGAT 1 cut(s) 77
BsaAI YACGTR 1 cut(s) 497
BsaBI GATNNNNATC 1 cut(s) 1328
BsaHI GRCGYC 1 cut(s) 56
BsaJI CCNNGG 8 cut(s) 21, 166, 475, 645, 723, 1218, 1273, 1319
BsaWI WCCGGW 2 cut(s) 625, 1139
BsaXI ACNNNNNCTCC 2 cut(s) 1038, 1068
Bsc4I CCNNNNNNNGG 3 cut(s) 764, 797, 1318
Bse118I RCCGGY 1 cut(s) 625
Bse1I ACTGG 2 cut(s) 695, 1307
Bse21I CCTNAGG 1 cut(s) 991
Bse3DI GCAATG 2 cut(s) 373, 507
Bse8I GATNNNNATC 1 cut(s) 1328
BseBI CCWGG 1 cut(s) 102
BseCI ATCGAT 1 cut(s) 77
BseDI CCNNGG 8 cut(s) 21, 166, 475, 645, 723, 1218, 1273, 1319
BseGI GGATG 9 cut(s) 382, 388, 394, 485, 877, 1017, 1081, 1189, 1329
BseJI GATNNNNATC 1 cut(s) 1328
BseLI CCNNNNNNNGG 3 cut(s) 764, 797, 1318
BseMI GCAATG 2 cut(s) 373, 507
BseMII CTCAG 7 cut(s) 185, 228, 270, 287, 1005, 1268, 1386
BseNI ACTGG 2 cut(s) 695, 1307
BseRI GAGGAG 1 cut(s) 1242
BseXI GCAGC 1 cut(s) 299
BseYI CCCAGC 1 cut(s) 266
BsgI GTGCAG 1 cut(s) 900
BshFI GGCC 2 cut(s) 187, 989
BshTI ACCGGT 1 cut(s) 625
BshVI ATCGAT 1 cut(s) 77
BsiHKAI GWGCWC 1 cut(s) 572
BsiSI CCGG 4 cut(s) 626, 723, 1140, 1319
BslFI GGGAC 5 cut(s) 283, 575, 740, 895, 1021
BslI CCNNNNNNNGG 3 cut(s) 764, 797, 1318
BsmAI GTCTC 2 cut(s) 331, 532
BsmBI CGTCTC 1 cut(s) 331
BsmFI GGGAC 5 cut(s) 283, 575, 740, 895, 1021
BsnI GGCC 2 cut(s) 187, 989
Bsp119I TTCGAA 1 cut(s) 460
Bsp1286I GDGCHC 1 cut(s) 572
Bsp1407I TGTACA 1 cut(s) 550
Bsp143I GATC 6 cut(s) 781, 1024, 1035, 1165, 1285, 1326
Bsp19I CCATGG 2 cut(s) 166, 475
BspACI CCGC 1 cut(s) 705
BspANI GGCC 2 cut(s) 187, 989
BspCNI CTCAG 7 cut(s) 186, 229, 271, 286, 1004, 1267, 1387
BspDI ATCGAT 1 cut(s) 77
BspHI TCATGA 1 cut(s) 1111
BspLI GGNNCC 1 cut(s) 756
BspPI GGATC 2 cut(s) 776, 1173
BspT104I TTCGAA 1 cut(s) 460
BsrDI GCAATG 2 cut(s) 373, 507
BsrFI RCCGGY 1 cut(s) 625
BsrGI TGTACA 1 cut(s) 550
BsrI ACTGG 2 cut(s) 695, 1307
BssAI RCCGGY 1 cut(s) 625
BssECI CCNNGG 8 cut(s) 21, 166, 475, 645, 723, 1218, 1273, 1319
BssMI GATC 6 cut(s) 781, 1024, 1035, 1165, 1285, 1326
BssNAI GTATAC 1 cut(s) 494
BssNI GRCGYC 1 cut(s) 56
BssT1I CCWWGG 6 cut(s) 21, 166, 475, 645, 1218, 1273
Bst1107I GTATAC 1 cut(s) 494
Bst2UI CCWGG 1 cut(s) 102
Bst4CI ACNGT 2 cut(s) 404, 491
Bst6I CTCTTC 1 cut(s) 1188
BstACI GRCGYC 1 cut(s) 56
BstAUI TGTACA 1 cut(s) 550
BstBAI YACGTR 1 cut(s) 497
BstBI TTCGAA 1 cut(s) 460
BstC8I GCNNGC 2 cut(s) 759, 972
BstDSI CCRYGG 2 cut(s) 166, 475
BstF5I GGATG 9 cut(s) 382, 388, 394, 485, 877, 1017, 1081, 1189, 1329
BstH2I RGCGCY 1 cut(s) 1110
BstHHI GCGC 1 cut(s) 1109
BstKTI GATC 6 cut(s) 784, 1027, 1038, 1168, 1288, 1329
BstMAI GTCTC 2 cut(s) 331, 532
BstMBI GATC 6 cut(s) 781, 1024, 1035, 1165, 1285, 1326
BstMWI GCNNNNNNNGC 5 cut(s) 284, 938, 1058, 1115, 1255
BstNI CCWGG 1 cut(s) 102
BstNSI RCATGY 1 cut(s) 985
BstPAI GACNNNNGTC 1 cut(s) 693
BstSCI CCNGG 3 cut(s) 100, 722, 1318
BstSFI CTRYAG 1 cut(s) 684
BstV1I GCAGC 1 cut(s) 299
BstV2I GAAGAC 2 cut(s) 51, 718
BstX2I RGATCY 2 cut(s) 1165, 1285
BstYI RGATCY 2 cut(s) 1165, 1285
BstZ17I GTATAC 1 cut(s) 494
Bsu15I ATCGAT 1 cut(s) 77
Bsu36I CCTNAGG 1 cut(s) 991
BsuRI GGCC 2 cut(s) 187, 989
BsuTUI ATCGAT 1 cut(s) 77
BtgI CCRYGG 2 cut(s) 166, 475
BtgZI GCGATG 1 cut(s) 426
BtrI CACGTC 1 cut(s) 341
BtsCI GGATG 9 cut(s) 382, 388, 394, 485, 877, 1017, 1081, 1189, 1329
BtsI GCAGTG 1 cut(s) 804
BtsIMutI CAGTG 4 cut(s) 143, 409, 804, 1300
Cac8I GCNNGC 2 cut(s) 759, 972
CaiI CAGNNNCTG 2 cut(s) 542, 764
CciI TCATGA 1 cut(s) 1111
CfoI GCGC 1 cut(s) 1109
Cfr10I RCCGGY 1 cut(s) 625
Cfr13I GGNCC 1 cut(s) 186
ClaI ATCGAT 1 cut(s) 77
CseI GACGC 1 cut(s) 45
CsiI ACCWGGT 1 cut(s) 100
Csp6I GTAC 2 cut(s) 551, 1072
CspAI ACCGGT 1 cut(s) 625
CviQI GTAC 2 cut(s) 551, 1072
DpnI GATC 6 cut(s) 783, 1026, 1037, 1167, 1287, 1328
DpnII GATC 6 cut(s) 781, 1024, 1035, 1165, 1285, 1326
DraI TTTAAA 1 cut(s) 313
Eam1104I CTCTTC 1 cut(s) 1188
EarI CTCTTC 1 cut(s) 1188
Ecl136II GAGCTC 1 cut(s) 570
Eco130I CCWWGG 6 cut(s) 21, 166, 475, 645, 1218, 1273
Eco24I GRGCYC 1 cut(s) 572
Eco47III AGCGCT 1 cut(s) 1108
Eco53kI GAGCTC 1 cut(s) 570
Eco57I CTGAAG 2 cut(s) 119, 1310
Eco81I CCTNAGG 1 cut(s) 991
EcoICRI GAGCTC 1 cut(s) 570
EcoRII CCWGG 1 cut(s) 100
EcoT14I CCWWGG 6 cut(s) 21, 166, 475, 645, 1218, 1273
EcoT38I GRGCYC 1 cut(s) 572
ErhI CCWWGG 6 cut(s) 21, 166, 475, 645, 1218, 1273
Esp3I CGTCTC 1 cut(s) 331
FaqI GGGAC 5 cut(s) 283, 575, 740, 895, 1021
FbaI TGATCA 2 cut(s) 1035, 1326
FblI GTMKAC 1 cut(s) 493
Fnu4HI GCNGC 1 cut(s) 288
FokI GGATG 9 cut(s) 389, 395, 401, 492, 884, 1004, 1068, 1196, 1336
FriOI GRGCYC 1 cut(s) 572
Fsp4HI GCNGC 1 cut(s) 288
FspBI CTAG 3 cut(s) 87, 975, 1226
GlaI GCGC 1 cut(s) 1108
GluI GCNGC 1 cut(s) 288
GsaI CCCAGC 1 cut(s) 270
GsuI CTGGAG 1 cut(s) 712
HaeII RGCGCY 1 cut(s) 1110
HaeIII GGCC 2 cut(s) 187, 989
HapII CCGG 4 cut(s) 626, 723, 1140, 1319
HgaI GACGC 1 cut(s) 45
HhaI GCGC 1 cut(s) 1109
Hin1I GRCGYC 1 cut(s) 56
Hin6I GCGC 1 cut(s) 1107
HinP1I GCGC 1 cut(s) 1107
HincII GTYRAC 3 cut(s) 487, 652, 1231
HindII GTYRAC 3 cut(s) 487, 652, 1231
HindIII AAGCTT 2 cut(s) 432, 1116
HinfI GANTC 7 cut(s) 271, 539, 593, 694, 742, 832, 1315
HpaI GTTAAC 2 cut(s) 487, 652
HpaII CCGG 4 cut(s) 626, 723, 1140, 1319
HphI GGTGA 9 cut(s) 224, 310, 383, 464, 615, 737, 1154, 1262, 1355
Hpy166II GTNNAC 5 cut(s) 487, 494, 652, 1231, 1270
Hpy188I TCNGA 6 cut(s) 67, 195, 598, 1290, 1380, 1396
Hpy188III TCNNGA 4 cut(s) 993, 1112, 1156, 1241
Hpy8I GTNNAC 5 cut(s) 487, 494, 652, 1231, 1270
HpyAV CCTTC 5 cut(s) 156, 456, 668, 1174, 1285
HpyCH4III ACNGT 2 cut(s) 404, 491
HpyCH4IV ACGT 6 cut(s) 12, 324, 340, 496, 849, 1091
HpyCH4V TGCA 9 cut(s) 500, 701, 732, 809, 884, 917, 981, 1130, 1211
HpyF10VI GCNNNNNNNGC 5 cut(s) 284, 938, 1058, 1115, 1255
HpySE526I ACGT 6 cut(s) 12, 324, 340, 496, 849, 1091
Hsp92I GRCGYC 1 cut(s) 56
HspAI GCGC 1 cut(s) 1107
Ksp22I TGATCA 2 cut(s) 1035, 1326
KspAI GTTAAC 2 cut(s) 487, 652
Kzo9I GATC 6 cut(s) 781, 1024, 1035, 1165, 1285, 1326
LmnI GCTCC 2 cut(s) 754, 1104
Lsp1109I GCAGC 1 cut(s) 299
LweI GCATC 2 cut(s) 1039, 1090
MabI ACCWGGT 1 cut(s) 100
MaeI CTAG 3 cut(s) 87, 975, 1226
MaeII ACGT 6 cut(s) 12, 324, 340, 496, 849, 1091
MaeIII GTNAC 4 cut(s) 140, 404, 662, 1132
MalI GATC 6 cut(s) 783, 1026, 1037, 1167, 1287, 1328
MboI GATC 6 cut(s) 781, 1024, 1035, 1165, 1285, 1326
MfeI CAATTG 1 cut(s) 1095
MflI RGATCY 2 cut(s) 1165, 1285
MhlI GDGCHC 1 cut(s) 572
MluCI AATT 2 cut(s) 157, 1095
MlyI GAGTC 3 cut(s) 265, 703, 841
MroXI GAANNNNTTC 1 cut(s) 132
MseI TTAA 6 cut(s) 312, 486, 579, 633, 651, 1361
MslI CAYNNNNRTG 5 cut(s) 480, 522, 579, 669, 1361
MspA1I CMGCKG 1 cut(s) 707
MspI CCGG 4 cut(s) 626, 723, 1140, 1319
MspR9I CCNGG 3 cut(s) 102, 724, 1320
MunI CAATTG 1 cut(s) 1095
MvaI CCWGG 1 cut(s) 102
MwoI GCNNNNNNNGC 5 cut(s) 284, 938, 1058, 1115, 1255
NciI CCSGG 2 cut(s) 724, 1320
NcoI CCATGG 2 cut(s) 166, 475
NdeII GATC 6 cut(s) 781, 1024, 1035, 1165, 1285, 1326
NlaIV GGNNCC 1 cut(s) 756
NmuCI GTSAC 4 cut(s) 140, 404, 662, 1132
NspI RCATGY 1 cut(s) 985
NspV TTCGAA 1 cut(s) 460
PagI TCATGA 1 cut(s) 1111
PdmI GAANNNNTTC 1 cut(s) 132
PfeI GAWTC 4 cut(s) 539, 593, 742, 1315
PflMI CCANNNNNTGG 1 cut(s) 764
PinAI ACCGGT 1 cut(s) 625
PkrI GCNGC 1 cut(s) 289
PleI GAGTC 3 cut(s) 265, 702, 840
PpsI GAGTC 3 cut(s) 265, 702, 840
Ppu21I YACGTR 1 cut(s) 497
PshAI GACNNNNGTC 1 cut(s) 693
PsiI TTATAA 1 cut(s) 156
Psp124BI GAGCTC 1 cut(s) 572
Psp6I CCWGG 1 cut(s) 100
PspFI CCCAGC 1 cut(s) 266
PspGI CCWGG 1 cut(s) 100
PspN4I GGNNCC 1 cut(s) 756
PspPI GGNCC 1 cut(s) 186
PstNI CAGNNNCTG 2 cut(s) 542, 764
PsuI RGATCY 2 cut(s) 1165, 1285
RsaI GTAC 2 cut(s) 552, 1073
RsaNI GTAC 2 cut(s) 551, 1072
RseI CAYNNNNRTG 5 cut(s) 480, 522, 579, 669, 1361
SacI GAGCTC 1 cut(s) 572
SaqAI TTAA 6 cut(s) 312, 486, 579, 633, 651, 1361
SatI GCNGC 1 cut(s) 288
Sau3AI GATC 6 cut(s) 781, 1024, 1035, 1165, 1285, 1326
Sau96I GGNCC 1 cut(s) 186
SchI GAGTC 3 cut(s) 265, 703, 841
ScrFI CCNGG 3 cut(s) 102, 724, 1320
SduI GDGCHC 1 cut(s) 572
SexAI ACCWGGT 1 cut(s) 100
SfaNI GCATC 2 cut(s) 1039, 1090
SfcI CTRYAG 1 cut(s) 684
SfuI TTCGAA 1 cut(s) 460
SmiMI CAYNNNNRTG 5 cut(s) 480, 522, 579, 669, 1361
SmlI CTYRAG 1 cut(s) 1239
SmoI CTYRAG 1 cut(s) 1239
SpeI ACTAGT 1 cut(s) 1225
Sse9I AATT 2 cut(s) 157, 1095
SsiI CCGC 1 cut(s) 705
SspI AATATT 1 cut(s) 451
SspMI CTAG 3 cut(s) 87, 975, 1226
SstI GAGCTC 1 cut(s) 572
StyD4I CCNGG 3 cut(s) 100, 722, 1318
StyI CCWWGG 6 cut(s) 21, 166, 475, 645, 1218, 1273
TaaI ACNGT 2 cut(s) 404, 491
TaiI ACGT 6 cut(s) 15, 327, 343, 499, 852, 1094
TaqI TCGA 4 cut(s) 77, 460, 898, 1121
TasI AATT 2 cut(s) 157, 1095
TatI WGTACW 1 cut(s) 550
TfiI GAWTC 4 cut(s) 539, 593, 742, 1315
Tru1I TTAA 6 cut(s) 312, 486, 579, 633, 651, 1361
Tru9I TTAA 6 cut(s) 312, 486, 579, 633, 651, 1361
TscAI CASTG 4 cut(s) 143, 409, 811, 1307
TseFI GTSAC 4 cut(s) 140, 404, 662, 1132
TseI GCWGC 1 cut(s) 287
Tsp45I GTSAC 4 cut(s) 140, 404, 662, 1132
TspDTI ATGAA 5 cut(s) 444, 687, 759, 1128, 1200
TspGWI ACGGA 4 cut(s) 438, 780, 1010, 1380
TspRI CASTG 4 cut(s) 143, 409, 811, 1307
Van91I CCANNNNNTGG 1 cut(s) 764
XceI RCATGY 1 cut(s) 985
XcmI CCANNNNNNNNNTGG 1 cut(s) 90
XmiI GTMKAC 1 cut(s) 493
XmnI GAANNNNTTC 1 cut(s) 132
XspI CTAG 3 cut(s) 87, 975, 1226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.