FvH4_1g07300

Glutamate-rich WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0011879
Physical Location & Seq
Reverse (-)
3848778 .. 3853510
4733 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g07300.t1

Sequence Viewer

Length: 1407 bp
ATGGTCCGAAGCATCAAGAACCCTAAGAAAGCCAAAAGAAAGAACAAGGCTTCGAAGAAGGGAGATGGGTCTTCGTCGTCTTCAGGGCCGCCGGCAAAGGTGTGGCAGCCAGGTGTGGACAAATTGGAGGAAGGAGAAGAGCTCCAGTGTGACCCTACTGCTTACGACTCTCTCCACGCCTTCCATATTGGTTGGCCTTGTCTAAGCTTTGATATTGTAAAAGATACATTGGGGATGGTGAGGACAGAGTTCCCGCATACGGTGTACTTTGTTGCTGGGACTCAGGCAGAGAAATCTTCTTGGAACTCTCTTAGCATATTTAAAGTATCCAACATTTCTGGGAAGAAGCGTGAACCAGTGCCAACCAAATCTGGTGATGATGAGTCAAATATGGGTAGTGATGATAGTGGAAGTGACGAAGATAGTGAGGATGAGGAGCTCGGAGGATCTGGCGCACCAGTTTTGCAGTTGCGTAAGGTAACTCATGAAGGATGTGTGAATCGTATACGAGCCATGACACAAAATCCTCATATATGTGCATCTTGGGGAGATACTGGTCATGTGCAGGTTTGGGACTTCAGTTCTCATCTTAATGCTTTAGCAGAATCAGAATCAGAAGTTAGCCAAGGACCTTCTACCCAGGCTCCATTGTTTACGTTTGGGCATAAAGATGAAGGATTCGCTCTTGATTGGAGTCCTGTTGCAACAGGAAGGCTTCTGTCTGGGGACTGCAAGAGTAATATACATTTATGGGAACCTACTGATGGATCATGGAAAGTTGAAACCACTCCGTATATAGGACATACTGCAAGCGTGGAAGATTTGCAGTGGAGCCCTACAGAACCTGATGTATTTGCTTCTTGTTCTGTGGATGGGAATATAGCAATGTGGGACACCCGTTCAGGGAAGTCACCTGTAGCTTCTTTTAAGGCTCATAATGCTGATGTAAATGTTATTTCTTGGAACAGGCTGGCCAGTTGTATGTTAGCATCCGGAAGTGACGATGGTACCTTTGCTATCCGTGACCTCAGATTGCTCAAGGGAGGAGATTCTGTAGTGGCACATTTTGAGTACCATAAACACCCTATTACATCCATCGAATGGAGTCCACATGAAGCTTCTACTTTGGCGGTGTCATCTGCTGACAATCAGCTAACAATATGGGACCTTTCTTTAGAAAATGATGAGGAAGAGGAGGCAGAATTTAAAGCTAAAACAAAAGAGGAAGTGAATGCTCCAAAAGATTTACCTCCACAACTTCTGTTTGTTCACCAGGGACAAAAAGACTTGAAAGAACTTCATTGGCATTCACAAATTCCTGGCATGATCGTGTCAACTGCAGCAGATGGTTATAATATTTTGATGCCTTCAAACATACAGACCACCCTTCCATCTGATGGTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CAF1C_H4-bd WD40

Protein Analysis

469

Amino Acids

51.11

Weight (kDa)

5.05

Isoelectric Point (pI)

50.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CAF1C_H4-bd PF12265 46 - 112 9.3e-14 Histone-binding protein RBBP4 or subunit C of CAF1 complex
Beta-prop_WDR5 PF25175 161 - 303 4.8e-07 WDR5 beta-propeller domain
WD40_WDHD1_1st PF24817 162 - 338 1.2e-07 WDHD1 first WD40 domain
WD40_CDC20-Fz PF24807 165 - 303 3.6e-07 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 222 - 322 9.7e-16 THOC3 beta-propeller domain
WD40_Prp19 PF24814 228 - 344 1.2e-09 Prp19 WD40 domain
WDR55 PF24796 239 - 393 1.1e-09 WDR55
Beta-prop_EIPR1 PF23609 244 - 338 3.9e-06 EIPR1 beta-propeller
WD40_CDC20-Fz PF24807 245 - 405 2.7e-19 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 246 - 393 9.8e-18 WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_1st PF25171 247 - 388 6.3e-08 WDR36/Utp21 first beta-propeller
Beta-prop_TEP1_2nd PF25047 265 - 391 4.8e-07 TEP-1 second beta-propeller
Beta-prop_WDR19_1st PF23389 266 - 391 2.7e-06 WDR19 first beta-propeller
Beta-prop_WDR5 PF25175 267 - 391 1.2e-17 WDR5 beta-propeller domain
Beta-prop_EML_2 PF23414 277 - 392 9.5e-10 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_THOC3 PF25174 312 - 392 9.6e-10 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011879)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G19540
fragaria_vesca FvH4_1g07300
malus_domestica MD02G1077800.v1.1 MD15G1206400.v1.1
prunus_persica Prupe.7G211000_v2.0.a1 Prupe.7G211000_v2.0.a1 Prupe.7G211000_v2.0.a1
pyrus_communis pycom02g06200
rosa_chinensis RchiOBHm_Chr2g0093231
rosa_laevigata RLG00000016380
rosa_multiflora Rmu_sc0003724.1_g000014 Rmu_sc0037462.1_g000001
rosa_roxburghii Rroxscaffold_2G00148390
rosa_rugosa Rorug02G0033700
rosa_samantha Rh2AG079900 Rh2BG080800 Rh2CG083200 Rh2DG078800
rosa_wichuraiana Rw2G006710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1353
Acc36I ACCTGC 1 cut(s) 556
Acc65I GGTACC 1 cut(s) 1007
AccB1I GGYRCC 1 cut(s) 1007
AccB7I CCANNNNNTGG 2 cut(s) 1101, 1397
AccI GTMKAC 1 cut(s) 505
AccIII TCCGGA 1 cut(s) 992
AciI CCGC 3 cut(s) 89, 254, 1130
AclWI GGATC 2 cut(s) 454, 775
AcoI YGGCCR 1 cut(s) 972
AcsI RAATTY 2 cut(s) 1202, 1314
AcuI CTGAAG 2 cut(s) 66, 562
AfaI GTAC 3 cut(s) 266, 1009, 1073
AfiI CCNNNNNNNGG 6 cut(s) 259, 764, 797, 903, 1101, 1397
AgsI TTSAA 3 cut(s) 782, 1291, 1371
AjnI CCWGG 4 cut(s) 109, 639, 1272, 1318
AluBI AGCT 7 cut(s) 142, 207, 439, 920, 1118, 1153, 1211
AluI AGCT 7 cut(s) 142, 207, 439, 920, 1118, 1153, 1211
Alw21I GWGCWC 2 cut(s) 144, 441
AlwI GGATC 2 cut(s) 454, 775
AlwNI CAGNNNCTG 1 cut(s) 845
Aor13HI TCCGGA 1 cut(s) 992
AoxI GGCC 3 cut(s) 86, 194, 972
ApeKI GCWGC 2 cut(s) 106, 1340
ApoI RAATTY 2 cut(s) 1202, 1314
Asp718I GGTACC 1 cut(s) 1007
AspLEI GCGC 1 cut(s) 455
AspS9I GGNCC 5 cut(s) 4, 86, 629, 1165, 1400
AsuHPI GGTGA 4 cut(s) 250, 386, 903, 1262
AsuII TTCGAA 1 cut(s) 53
AvaII GGWCC 4 cut(s) 4, 629, 1165, 1400
BaeI ACNNNNGTAYC 2 cut(s) 991, 1024
BalI TGGCCA 1 cut(s) 974
BanI GGYRCC 1 cut(s) 1007
BanII GRGCYC 3 cut(s) 144, 441, 836
BbsI GAAGAC 2 cut(s) 63, 72
Bbv12I GWGCWC 2 cut(s) 144, 441
BbvI GCAGC 2 cut(s) 118, 1352
BccI CCATC 9 cut(s) 59, 229, 758, 866, 998, 1103, 1340, 1391, 1399
BciT130I CCWGG 4 cut(s) 111, 641, 1274, 1320
BciVI GTATCC 1 cut(s) 337
BfmI CTRYAG 4 cut(s) 837, 915, 1053, 1338
BfuAI ACCTGC 1 cut(s) 556
BfuI GTATCC 1 cut(s) 337
BisI GCNGC 3 cut(s) 89, 107, 1341
BlsI GCNGC 3 cut(s) 90, 108, 1342
Bme1390I CCNGG 4 cut(s) 111, 641, 1274, 1320
Bme18I GGWCC 4 cut(s) 4, 629, 1165, 1400
BmgT120I GGNCC 5 cut(s) 4, 86, 629, 1165, 1400
BmiI GGNNCC 5 cut(s) 645, 756, 833, 1009, 1166
BmrFI CCNGG 4 cut(s) 111, 641, 1274, 1320
BmsI GCATC 4 cut(s) 21, 548, 998, 1353
BpiI GAAGAC 2 cut(s) 63, 72
BplI GAGNNNNNCTC 2 cut(s) 126, 158
BpmI CTGGAG 1 cut(s) 128
Bpu14I TTCGAA 1 cut(s) 53
BpuEI CTTGAG 1 cut(s) 1022
BsaJI CCNNGG 3 cut(s) 625, 639, 1273
BsaWI WCCGGW 1 cut(s) 992
BsaXI ACNNNNNCTCC 4 cut(s) 628, 658, 1038, 1068
Bsc4I CCNNNNNNNGG 6 cut(s) 259, 764, 797, 903, 1101, 1397
Bse118I RCCGGY 1 cut(s) 91
Bse1I ACTGG 5 cut(s) 145, 356, 458, 559, 975
Bse3DI GCAATG 1 cut(s) 891
BseAI TCCGGA 1 cut(s) 992
BseBI CCWGG 4 cut(s) 111, 641, 1274, 1320
BseDI CCNNGG 3 cut(s) 625, 639, 1273
BseGI GGATG 6 cut(s) 240, 436, 497, 877, 989, 1091
BseLI CCNNNNNNNGG 6 cut(s) 259, 764, 797, 903, 1101, 1397
BseMI GCAATG 1 cut(s) 891
BseMII CTCAG 2 cut(s) 296, 1042
BseNI ACTGG 5 cut(s) 145, 356, 458, 559, 975
BseRI GAGGAG 3 cut(s) 449, 1059, 1208
BseXI GCAGC 2 cut(s) 118, 1352
BseYI CCCAGC 1 cut(s) 275
BsgI GTGCAG 1 cut(s) 584
BshFI GGCC 3 cut(s) 88, 196, 974
BshNI GGYRCC 1 cut(s) 1007
BsiHKAI GWGCWC 2 cut(s) 144, 441
BsiSI CCGG 2 cut(s) 92, 993
BslFI GGGAC 6 cut(s) 292, 587, 740, 905, 1178, 1290
BslI CCNNNNNNNGG 6 cut(s) 259, 764, 797, 903, 1101, 1397
BsmFI GGGAC 6 cut(s) 292, 587, 740, 905, 1178, 1290
BsmI GAATGC 2 cut(s) 1237, 1306
BsnI GGCC 3 cut(s) 88, 196, 974
Bsp119I TTCGAA 1 cut(s) 53
Bsp1286I GDGCHC 3 cut(s) 144, 441, 836
Bsp13I TCCGGA 1 cut(s) 992
Bsp143I GATC 3 cut(s) 446, 767, 1326
BspACI CCGC 3 cut(s) 89, 254, 1130
BspANI GGCC 3 cut(s) 88, 196, 974
BspCNI CTCAG 2 cut(s) 295, 1041
BspEI TCCGGA 1 cut(s) 992
BspHI TCATGA 1 cut(s) 484
BspLI GGNNCC 5 cut(s) 645, 756, 833, 1009, 1166
BspMAI CTGCAG 1 cut(s) 1342
BspMI ACCTGC 1 cut(s) 556
BspPI GGATC 2 cut(s) 454, 775
BspQI GCTCTTC 1 cut(s) 132
BspT104I TTCGAA 1 cut(s) 53
BspT107I GGYRCC 1 cut(s) 1007
BsrDI GCAATG 1 cut(s) 891
BsrFI RCCGGY 1 cut(s) 91
BsrI ACTGG 5 cut(s) 145, 356, 458, 559, 975
BssAI RCCGGY 1 cut(s) 91
BssECI CCNNGG 3 cut(s) 625, 639, 1273
BssMI GATC 3 cut(s) 446, 767, 1326
BssNAI GTATAC 1 cut(s) 506
BssT1I CCWWGG 1 cut(s) 625
Bst1107I GTATAC 1 cut(s) 506
Bst2UI CCWGG 4 cut(s) 111, 641, 1274, 1320
Bst4CI ACNGT 1 cut(s) 262
Bst6I CTCTTC 2 cut(s) 132, 1185
BstBI TTCGAA 1 cut(s) 53
BstC8I GCNNGC 3 cut(s) 93, 811, 972
BstDEI CTNAG 5 cut(s) 24, 203, 282, 311, 1028
BstF5I GGATG 6 cut(s) 240, 436, 497, 877, 989, 1091
BstHHI GCGC 1 cut(s) 455
BstKTI GATC 3 cut(s) 449, 770, 1329
BstMBI GATC 3 cut(s) 446, 767, 1326
BstMWI GCNNNNNNNGC 1 cut(s) 938
BstNI CCWGG 4 cut(s) 111, 641, 1274, 1320
BstSCI CCNGG 4 cut(s) 109, 639, 1272, 1318
BstSFI CTRYAG 4 cut(s) 837, 915, 1053, 1338
BstV1I GCAGC 2 cut(s) 118, 1352
BstV2I GAAGAC 2 cut(s) 63, 72
BstX2I RGATCY 1 cut(s) 446
BstYI RGATCY 1 cut(s) 446
BstZ17I GTATAC 1 cut(s) 506
BsuI GTATCC 1 cut(s) 337
BsuRI GGCC 3 cut(s) 88, 196, 974
BtsCI GGATG 6 cut(s) 240, 436, 497, 877, 989, 1091
BtsI GCAGTG 1 cut(s) 833
BtsIMutI CAGTG 3 cut(s) 152, 363, 833
BveI ACCTGC 1 cut(s) 556
Cac8I GCNNGC 3 cut(s) 93, 811, 972
CaiI CAGNNNCTG 1 cut(s) 845
CciI TCATGA 1 cut(s) 484
CfoI GCGC 1 cut(s) 455
Cfr10I RCCGGY 1 cut(s) 91
Cfr13I GGNCC 5 cut(s) 4, 86, 629, 1165, 1400
Csp6I GTAC 3 cut(s) 265, 1008, 1072
CviAII CATG 6 cut(s) 485, 514, 560, 771, 1112, 1324
CviQI GTAC 3 cut(s) 265, 1008, 1072
DdeI CTNAG 5 cut(s) 24, 203, 282, 311, 1028
DpnI GATC 3 cut(s) 448, 769, 1328
DpnII GATC 3 cut(s) 446, 767, 1326
DraI TTTAAA 2 cut(s) 322, 1207
EaeI YGGCCR 1 cut(s) 972
Eam1104I CTCTTC 2 cut(s) 132, 1185
EarI CTCTTC 2 cut(s) 132, 1185
Ecl136II GAGCTC 2 cut(s) 142, 439
Eco130I CCWWGG 1 cut(s) 625
Eco24I GRGCYC 3 cut(s) 144, 441, 836
Eco47I GGWCC 4 cut(s) 4, 629, 1165, 1400
Eco53kI GAGCTC 2 cut(s) 142, 439
Eco57I CTGAAG 2 cut(s) 66, 562
EcoICRI GAGCTC 2 cut(s) 142, 439
EcoO109I RGGNCCY 2 cut(s) 629, 1165
EcoRII CCWGG 4 cut(s) 109, 639, 1272, 1318
EcoT14I CCWWGG 1 cut(s) 625
EcoT38I GRGCYC 3 cut(s) 144, 441, 836
ErhI CCWWGG 1 cut(s) 625
FaeI CATG 6 cut(s) 488, 517, 563, 774, 1115, 1327
FaqI GGGAC 6 cut(s) 292, 587, 740, 905, 1178, 1290
FatI CATG 6 cut(s) 484, 513, 559, 770, 1111, 1323
FauI CCCGC 1 cut(s) 261
FblI GTMKAC 1 cut(s) 505
Fnu4HI GCNGC 3 cut(s) 89, 107, 1341
FokI GGATG 6 cut(s) 247, 443, 504, 884, 976, 1078
FriOI GRGCYC 3 cut(s) 144, 441, 836
Fsp4HI GCNGC 3 cut(s) 89, 107, 1341
GlaI GCGC 1 cut(s) 454
GluI GCNGC 3 cut(s) 89, 107, 1341
GsaI CCCAGC 1 cut(s) 279
GsuI CTGGAG 1 cut(s) 128
HaeIII GGCC 3 cut(s) 88, 196, 974
HapII CCGG 2 cut(s) 92, 993
HhaI GCGC 1 cut(s) 455
Hin1II CATG 6 cut(s) 488, 517, 563, 774, 1115, 1327
Hin6I GCGC 1 cut(s) 453
HinP1I GCGC 1 cut(s) 453
HincII GTYRAC 1 cut(s) 1335
HindII GTYRAC 1 cut(s) 1335
HindIII AAGCTT 2 cut(s) 205, 1116
HpaII CCGG 2 cut(s) 92, 993
HphI GGTGA 4 cut(s) 250, 386, 903, 1262
Hpy166II GTNNAC 8 cut(s) 118, 265, 353, 506, 654, 1109, 1270, 1335
Hpy188I TCNGA 6 cut(s) 8, 443, 610, 616, 1031, 1396
Hpy188III TCNNGA 4 cut(s) 16, 485, 686, 993
Hpy8I GTNNAC 8 cut(s) 118, 265, 353, 506, 654, 1109, 1270, 1335
Hpy99I CGWCG 1 cut(s) 79
HpyAV CCTTC 9 cut(s) 52, 125, 190, 482, 642, 668, 705, 1377, 1397
HpyCH4III ACNGT 1 cut(s) 262
HpyCH4IV ACGT 1 cut(s) 656
HpyCH4V TGCA 8 cut(s) 466, 539, 565, 704, 732, 809, 826, 1340
HpyF10VI GCNNNNNNNGC 1 cut(s) 938
HpyF3I CTNAG 5 cut(s) 24, 203, 282, 311, 1028
HpySE526I ACGT 1 cut(s) 656
Hsp92II CATG 6 cut(s) 488, 517, 563, 774, 1115, 1327
HspAI GCGC 1 cut(s) 453
Kpn2I TCCGGA 1 cut(s) 992
KpnI GGTACC 1 cut(s) 1011
KroI GCCGGC 1 cut(s) 91
KroNI GCCGGC 1 cut(s) 93
Kzo9I GATC 3 cut(s) 446, 767, 1326
LguI GCTCTTC 1 cut(s) 132
LmnI GCTCC 5 cut(s) 147, 436, 649, 831, 1240
Lsp1109I GCAGC 2 cut(s) 118, 1352
LweI GCATC 4 cut(s) 21, 548, 998, 1353
MaeII ACGT 1 cut(s) 656
MaeIII GTNAC 6 cut(s) 149, 413, 478, 909, 998, 1022
MalI GATC 3 cut(s) 448, 769, 1328
MboI GATC 3 cut(s) 446, 767, 1326
MboII GAAGA 9 cut(s) 63, 67, 72, 149, 288, 355, 431, 830, 1202
MflI RGATCY 1 cut(s) 446
MhlI GDGCHC 3 cut(s) 144, 441, 836
MlsI TGGCCA 1 cut(s) 974
MluCI AATT 3 cut(s) 122, 1202, 1314
MluNI TGGCCA 1 cut(s) 974
MlyI GAGTC 5 cut(s) 161, 274, 392, 703, 1114
MmeI TCCRAC 1 cut(s) 354
Mox20I TGGCCA 1 cut(s) 974
MroI TCCGGA 1 cut(s) 992
MroNI GCCGGC 1 cut(s) 91
MscI TGGCCA 1 cut(s) 974
MseI TTAA 4 cut(s) 321, 591, 927, 1206
MslI CAYNNNNRTG 4 cut(s) 534, 591, 669, 1328
Msp20I TGGCCA 1 cut(s) 974
MspI CCGG 2 cut(s) 92, 993
MspR9I CCNGG 4 cut(s) 111, 641, 1274, 1320
Mva1269I GAATGC 2 cut(s) 1237, 1306
MvaI CCWGG 4 cut(s) 111, 641, 1274, 1320
MwoI GCNNNNNNNGC 1 cut(s) 938
NaeI GCCGGC 1 cut(s) 93
NdeII GATC 3 cut(s) 446, 767, 1326
NgoMIV GCCGGC 1 cut(s) 91
NlaIII CATG 6 cut(s) 488, 517, 563, 774, 1115, 1327
NlaIV GGNNCC 5 cut(s) 645, 756, 833, 1009, 1166
NmuCI GTSAC 5 cut(s) 149, 413, 909, 998, 1022
NspV TTCGAA 1 cut(s) 53
PagI TCATGA 1 cut(s) 484
PciSI GCTCTTC 1 cut(s) 132
PctI GAATGC 2 cut(s) 1237, 1306
PdiI GCCGGC 1 cut(s) 93
PfeI GAWTC 5 cut(s) 499, 605, 611, 678, 1049
PflMI CCANNNNNTGG 2 cut(s) 1101, 1397
PkrI GCNGC 3 cut(s) 90, 108, 1342
PleI GAGTC 5 cut(s) 161, 274, 391, 702, 1113
PpsI GAGTC 5 cut(s) 161, 274, 391, 702, 1113
PpuMI RGGWCCY 2 cut(s) 629, 1165
PsiI TTATAA 1 cut(s) 1353
Psp124BI GAGCTC 2 cut(s) 144, 441
Psp5II RGGWCCY 2 cut(s) 629, 1165
Psp6I CCWGG 4 cut(s) 109, 639, 1272, 1318
PspFI CCCAGC 1 cut(s) 275
PspGI CCWGG 4 cut(s) 109, 639, 1272, 1318
PspN4I GGNNCC 5 cut(s) 645, 756, 833, 1009, 1166
PspPI GGNCC 5 cut(s) 4, 86, 629, 1165, 1400
PspPPI RGGWCCY 2 cut(s) 629, 1165
PstI CTGCAG 1 cut(s) 1342
PstNI CAGNNNCTG 1 cut(s) 845
PsuI RGATCY 1 cut(s) 446
RsaI GTAC 3 cut(s) 266, 1009, 1073
RsaNI GTAC 3 cut(s) 265, 1008, 1072
RseI CAYNNNNRTG 4 cut(s) 534, 591, 669, 1328
SacI GAGCTC 2 cut(s) 144, 441
SapI GCTCTTC 1 cut(s) 132
SaqAI TTAA 4 cut(s) 321, 591, 927, 1206
SatI GCNGC 3 cut(s) 89, 107, 1341
Sau3AI GATC 3 cut(s) 446, 767, 1326
Sau96I GGNCC 5 cut(s) 4, 86, 629, 1165, 1400
SchI GAGTC 5 cut(s) 161, 274, 392, 703, 1114
ScrFI CCNGG 4 cut(s) 111, 641, 1274, 1320
SduI GDGCHC 3 cut(s) 144, 441, 836
SfaNI GCATC 4 cut(s) 21, 548, 998, 1353
SfcI CTRYAG 4 cut(s) 837, 915, 1053, 1338
SfuI TTCGAA 1 cut(s) 53
SinI GGWCC 4 cut(s) 4, 629, 1165, 1400
SmiMI CAYNNNNRTG 4 cut(s) 534, 591, 669, 1328
SmlI CTYRAG 1 cut(s) 1037
SmoI CTYRAG 1 cut(s) 1037
Sse9I AATT 3 cut(s) 122, 1202, 1314
SsiI CCGC 3 cut(s) 89, 254, 1130
SspI AATATT 1 cut(s) 1357
SstI GAGCTC 2 cut(s) 144, 441
StyD4I CCNGG 4 cut(s) 109, 639, 1272, 1318
StyI CCWWGG 1 cut(s) 625
TaaI ACNGT 1 cut(s) 262
TaiI ACGT 1 cut(s) 659
TaqI TCGA 2 cut(s) 53, 1098
TasI AATT 3 cut(s) 122, 1202, 1314
TatI WGTACW 1 cut(s) 264
TauI GCSGC 1 cut(s) 91
TfiI GAWTC 5 cut(s) 499, 605, 611, 678, 1049
Tru1I TTAA 4 cut(s) 321, 591, 927, 1206
Tru9I TTAA 4 cut(s) 321, 591, 927, 1206
TscAI CASTG 3 cut(s) 152, 363, 833
TseFI GTSAC 5 cut(s) 149, 413, 909, 998, 1022
TseI GCWGC 2 cut(s) 106, 1340
Tsp45I GTSAC 5 cut(s) 149, 413, 909, 998, 1022
TspDTI ATGAA 4 cut(s) 501, 687, 1128, 1289
TspGWI ACGGA 2 cut(s) 780, 1010
TspRI CASTG 3 cut(s) 152, 363, 833
Van91I CCANNNNNTGG 2 cut(s) 1101, 1397
VpaK11BI GGWCC 4 cut(s) 4, 629, 1165, 1400
XapI RAATTY 2 cut(s) 1202, 1314
XmiI GTMKAC 1 cut(s) 505
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.