Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008743

Physical Location & Seq

Genomic Coordinates Reverse (-)

8475276 .. 8477733

Gene Structure 2458 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G19590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 933 bp

ATGGTTTTGATCAAAGAGAGAGAGATGGAGATTCCAGTTATTGATTTTGCAGAGTTGGATGGAGAGAAGAGAAGCAAGACCATGTCACTTCTTGATCATGCATGTGATAAGTGGGGATTCTTCATGGTTGATAATCATGGAATTGATAAAGAGTTGATGGAGAAAGTGAAGAAGATGATTAACTCTCACTATGAGGAGCATTTGAAAGAGAAGTTTTACCAGTCAGAGATGGTCAAGGCTTTGAGTGAAGGCAAAACCTCAGATGCAGATTGGGAAAGCAGTTTCTTCATCTCACATAAACCAACTTCAAATATCTGTCAGATCCCAAACATTTCAGAGGAACTCAGCAAGACGATGGATGAATATGTTTGTCAACTGCACAAGTTTGCAGAGAGACTCTCCAAGCTCATGTGTGAGAATCTTGGTCTTGATCAGGAAGACATAATGAATGCCTTTTCTGGTCCAAAAGGTCCAGCTTTTGGAACAAAAGTGGCTAAATACCCAGAATGCCCACGTCCTGAGCTTATGAGAGGGCTGAGAGAACATACGGATGCTGGGGGAATCATATTACTCCTGCAGGATGATCAAGTGCCTGGTCTTGAGTTCTTTAAAGATGGGAAGTGGGTTCCTATACCGCCATCCAAGAACAATACCATTTTTGTCAATACCGGTGATCAACTAGAGATACTGAGTAATGGGAGGTACAAGAGTGTTGTTCACCGTGTAATGACAGTGAAGCATGGAAGTAGACTGTCGATTGCTACGTTTTACAATCCGGCTGGTGATGCCATAATATCTCCAGCTCCAAAGCTCTTGTATCCAAGTGGCTACCGTTTTCAAGACTACCTAAAGCTTTATTCAACTACCAAGTTTGGAGACAAAGGCCCCAGACTTGAGACCATGAAGAAAATGGGAAATGCGGATTCAGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0035690 GO:0042221 GO:0042493 GO:0042594 GO:0050896 GO:0051365 GO:0051716 GO:0070542 GO:0070887 GO:0071229 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071396 GO:0071398 GO:0071496 GO:0071731 GO:0071732 GO:0097366 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170

KEGG Pathways

Metabolic & Signaling

ko00270 ko01100 ko01110 map00270 map01100 map01110

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

310

Amino Acids

35.2

Weight (kDa)

6.17

Isoelectric Point (pI)

38.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DIOX_N	PF14226	11 - 101	1.6e-16	non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy	PF03171	165 - 259	7e-31	2OG-Fe(II) oxygenase superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008743)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19590 AT2G19590
fragaria_vesca	FvH4_1g07181 FvH4_1g07181 FvH4_1g07181 FvH4_1g07190
malus_domestica	MD15G1205100.v1.1
prunus_persica	Prupe.7G212000_v2.0.a1 Prupe.7G212000_v2.0.a1 Prupe.7G212000_v2.0.a1 Prupe.7G212000_v2.0.a1
pyrus_communis	pycom15g18190
rosa_chinensis	RchiOBHm_Chr2g0093091
rosa_laevigata	RLG00000016367
rosa_multiflora	Rmu_sc0006865.1_g000009
rosa_roxburghii	Rroxscaffold_2G00148520
rosa_rugosa	Rorug02G0032600 Rorug02G0032700
rosa_samantha	Rh2AG078000 Rh2BG079300 Rh2CG081700 Rh2DG077000
rosa_wichuraiana	Rw2G006830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	479
AccI	GTMKAC	1 cut(s)	748
AciI	CCGC	2 cut(s)	635, 920
AclWI	GGATC	1 cut(s)	316
AfaI	GTAC	1 cut(s)	704
AfiI	CCNNNNNNNGG	1 cut(s)	479
AgeI	ACCGGT	1 cut(s)	668
AgsI	TTSAA	4 cut(s)	205, 309, 839, 861
AjiI	CACGTC	1 cut(s)	515
AjnI	CCWGG	1 cut(s)	592
AluBI	AGCT	6 cut(s)	406, 476, 523, 803, 811, 853
AluI	AGCT	6 cut(s)	406, 476, 523, 803, 811, 853
Alw26I	GTCTC	3 cut(s)	388, 870, 890
AlwI	GGATC	1 cut(s)	316
AoxI	GGCC	1 cut(s)	883
AsiGI	ACCGGT	1 cut(s)	668
AspS9I	GGNCC	3 cut(s)	461, 470, 884
AsuHPI	GGTGA	3 cut(s)	683, 710, 794
AvaII	GGWCC	2 cut(s)	461, 470
BaeI	ACNNNNGTAYC	2 cut(s)	694, 727
BbsI	GAAGAC	1 cut(s)	444
BccI	CCATC	7 cut(s)	19, 53, 151, 223, 349, 608, 646
BciT130I	CCWGG	1 cut(s)	594
BciVI	GTATCC	1 cut(s)	828
BclI	TGATCA	5 cut(s)	9, 94, 430, 583, 673
BcoDI	GTCTC	3 cut(s)	388, 870, 890
BfaI	CTAG	2 cut(s)	680, 931
BfmI	CTRYAG	1 cut(s)	575
BfuI	GTATCC	1 cut(s)	828
Bme1390I	CCNGG	1 cut(s)	594
Bme18I	GGWCC	2 cut(s)	461, 470
BmgBI	CACGTC	1 cut(s)	515
BmgT120I	GGNCC	3 cut(s)	461, 470, 884
BmiI	GGNNCC	2 cut(s)	627, 886
BmrFI	CCNGG	1 cut(s)	594
BmsI	GCATC	3 cut(s)	253, 541, 775
BpiI	GAAGAC	1 cut(s)	444
BplI	GAGNNNNNCTC	2 cut(s)	383, 415
BpmI	CTGGAG	1 cut(s)	783
Bpu10I	CCTNAGC	1 cut(s)	519
BpuEI	CTTGAG	2 cut(s)	620, 914
BsaI	GGTCTC	1 cut(s)	890
BsaWI	WCCGGW	1 cut(s)	668
Bsc4I	CCNNNNNNNGG	1 cut(s)	479
Bse118I	RCCGGY	1 cut(s)	668
Bse1I	ACTGG	2 cut(s)	35, 220
BseBI	CCWGG	1 cut(s)	594
BseGI	GGATG	5 cut(s)	64, 364, 556, 586, 638
BseLI	CCNNNNNNNGG	1 cut(s)	479
BseMII	CTCAG	5 cut(s)	273, 358, 510, 527, 680
BseNI	ACTGG	2 cut(s)	35, 220
BseRI	GAGGAG	1 cut(s)	209
BseYI	CCCAGC	1 cut(s)	554
BsgI	GTGCAG	1 cut(s)	362
BshFI	GGCC	1 cut(s)	885
BshTI	ACCGGT	1 cut(s)	668
BsiSI	CCGG	2 cut(s)	669, 776
BslI	CCNNNNNNNGG	1 cut(s)	479
BsmAI	GTCTC	3 cut(s)	388, 870, 890
BsmI	GAATGC	2 cut(s)	454, 512
BsnI	GGCC	1 cut(s)	885
Bso31I	GGTCTC	1 cut(s)	890
Bsp143I	GATC	6 cut(s)	9, 94, 321, 430, 583, 673
BspACI	CCGC	2 cut(s)	635, 920
BspANI	GGCC	1 cut(s)	885
BspCNI	CTCAG	5 cut(s)	272, 357, 511, 528, 681
BspLI	GGNNCC	2 cut(s)	627, 886
BspMAI	CTGCAG	1 cut(s)	579
BspPI	GGATC	1 cut(s)	316
BspTNI	GGTCTC	1 cut(s)	890
BsrFI	RCCGGY	1 cut(s)	668
BsrI	ACTGG	2 cut(s)	35, 220
BssAI	RCCGGY	1 cut(s)	668
BssMI	GATC	6 cut(s)	9, 94, 321, 430, 583, 673
Bst2UI	CCWGG	1 cut(s)	594
Bst4CI	ACNGT	4 cut(s)	722, 733, 753, 833
Bst6I	CTCTTC	1 cut(s)	62
BstDEI	CTNAG	5 cut(s)	259, 344, 519, 536, 689
BstF5I	GGATG	5 cut(s)	64, 364, 556, 586, 638
BstKTI	GATC	6 cut(s)	12, 97, 324, 433, 586, 676
BstMAI	GTCTC	3 cut(s)	388, 870, 890
BstMBI	GATC	6 cut(s)	9, 94, 321, 430, 583, 673
BstMWI	GCNNNNNNNGC	2 cut(s)	785, 926
BstNI	CCWGG	1 cut(s)	594
BstNSI	RCATGY	1 cut(s)	105
BstSCI	CCNGG	1 cut(s)	592
BstSFI	CTRYAG	1 cut(s)	575
BstV2I	GAAGAC	1 cut(s)	444
BstX2I	RGATCY	1 cut(s)	321
BstYI	RGATCY	1 cut(s)	321
BsuI	GTATCC	1 cut(s)	828
BsuRI	GGCC	1 cut(s)	885
BtrI	CACGTC	1 cut(s)	515
BtsCI	GGATG	5 cut(s)	64, 364, 556, 586, 638
BtsIMutI	CAGTG	1 cut(s)	738
Cfr10I	RCCGGY	1 cut(s)	668
Cfr13I	GGNCC	3 cut(s)	461, 470, 884
Csp6I	GTAC	1 cut(s)	703
CspAI	ACCGGT	1 cut(s)	668
CviAII	CATG	8 cut(s)	82, 98, 102, 124, 137, 409, 740, 901
CviQI	GTAC	1 cut(s)	703
DdeI	CTNAG	5 cut(s)	259, 344, 519, 536, 689
DpnI	GATC	6 cut(s)	11, 96, 323, 432, 585, 675
DpnII	GATC	6 cut(s)	9, 94, 321, 430, 583, 673
DraI	TTTAAA	1 cut(s)	610
Eam1104I	CTCTTC	1 cut(s)	62
EarI	CTCTTC	1 cut(s)	62
Eco31I	GGTCTC	1 cut(s)	890
Eco47I	GGWCC	2 cut(s)	461, 470
EcoO109I	RGGNCCY	1 cut(s)	884
EcoRII	CCWGG	1 cut(s)	592
EcoT22I	ATGCAT	1 cut(s)	103
FaeI	CATG	8 cut(s)	85, 101, 105, 127, 140, 412, 743, 904
FatI	CATG	8 cut(s)	81, 97, 101, 123, 136, 408, 739, 900
FbaI	TGATCA	5 cut(s)	9, 94, 430, 583, 673
FblI	GTMKAC	1 cut(s)	748
FokI	GGATG	5 cut(s)	71, 371, 563, 593, 625
FspBI	CTAG	2 cut(s)	680, 931
GsaI	CCCAGC	1 cut(s)	558
GsuI	CTGGAG	1 cut(s)	783
HaeIII	GGCC	1 cut(s)	885
HapII	CCGG	2 cut(s)	669, 776
Hin1II	CATG	8 cut(s)	85, 101, 105, 127, 140, 412, 743, 904
HincII	GTYRAC	1 cut(s)	374
HindII	GTYRAC	1 cut(s)	374
HindIII	AAGCTT	1 cut(s)	851
HinfI	GANTC	6 cut(s)	31, 117, 396, 418, 561, 923
HpaII	CCGG	2 cut(s)	669, 776
HphI	GGTGA	3 cut(s)	683, 710, 794
Hpy166II	GTNNAC	3 cut(s)	374, 718, 749
Hpy188I	TCNGA	4 cut(s)	226, 262, 321, 337
Hpy188III	TCNNGA	6 cut(s)	92, 428, 434, 518, 599, 839
Hpy8I	GTNNAC	3 cut(s)	374, 718, 749
HpyAV	CCTTC	1 cut(s)	242
HpyCH4III	ACNGT	4 cut(s)	722, 733, 753, 833
HpyCH4IV	ACGT	2 cut(s)	514, 764
HpyCH4V	TGCA	6 cut(s)	50, 101, 266, 379, 389, 577
HpyF10VI	GCNNNNNNNGC	2 cut(s)	785, 926
HpyF3I	CTNAG	5 cut(s)	259, 344, 519, 536, 689
HpySE526I	ACGT	2 cut(s)	514, 764
Hsp92II	CATG	8 cut(s)	85, 101, 105, 127, 140, 412, 743, 904
Ksp22I	TGATCA	5 cut(s)	9, 94, 430, 583, 673
Kzo9I	GATC	6 cut(s)	9, 94, 321, 430, 583, 673
LmnI	GCTCC	2 cut(s)	196, 808
LweI	GCATC	3 cut(s)	253, 541, 775
MaeI	CTAG	2 cut(s)	680, 931
MaeII	ACGT	2 cut(s)	514, 764
MaeIII	GTNAC	1 cut(s)	84
MalI	GATC	6 cut(s)	11, 96, 323, 432, 585, 675
MboI	GATC	6 cut(s)	9, 94, 321, 430, 583, 673
MboII	GAAGA	7 cut(s)	79, 112, 181, 184, 277, 449, 916
MflI	RGATCY	1 cut(s)	321
MluCI	AATT	1 cut(s)	141
MlyI	GAGTC	1 cut(s)	390
MmeI	TCCRAC	1 cut(s)	36
MnlI	CCTC	5 cut(s)	187, 268, 331, 524, 693
Mph1103I	ATGCAT	1 cut(s)	103
MseI	TTAA	2 cut(s)	180, 609
MslI	CAYNNNNRTG	2 cut(s)	102, 549
MspI	CCGG	2 cut(s)	669, 776
MspR9I	CCNGG	1 cut(s)	594
Mva1269I	GAATGC	2 cut(s)	454, 512
MvaI	CCWGG	1 cut(s)	594
MwoI	GCNNNNNNNGC	2 cut(s)	785, 926
NdeII	GATC	6 cut(s)	9, 94, 321, 430, 583, 673
NlaIII	CATG	8 cut(s)	85, 101, 105, 127, 140, 412, 743, 904
NlaIV	GGNNCC	2 cut(s)	627, 886
NmuCI	GTSAC	1 cut(s)	84
NsiI	ATGCAT	1 cut(s)	103
NspI	RCATGY	1 cut(s)	105
PcsI	WCGNNNNNNNCGW	1 cut(s)	761
PctI	GAATGC	2 cut(s)	454, 512
PfeI	GAWTC	5 cut(s)	31, 117, 418, 561, 923
PflFI	GACNNNGTC	1 cut(s)	82
PflMI	CCANNNNNTGG	1 cut(s)	479
PinAI	ACCGGT	1 cut(s)	668
PleI	GAGTC	1 cut(s)	390
PpsI	GAGTC	1 cut(s)	390
Psp6I	CCWGG	1 cut(s)	592
PspFI	CCCAGC	1 cut(s)	554
PspGI	CCWGG	1 cut(s)	592
PspN4I	GGNNCC	2 cut(s)	627, 886
PspPI	GGNCC	3 cut(s)	461, 470, 884
PstI	CTGCAG	1 cut(s)	579
PsuI	RGATCY	1 cut(s)	321
PsyI	GACNNNGTC	1 cut(s)	82
RsaI	GTAC	1 cut(s)	704
RsaNI	GTAC	1 cut(s)	703
RseI	CAYNNNNRTG	2 cut(s)	102, 549
SaqAI	TTAA	2 cut(s)	180, 609
Sau3AI	GATC	6 cut(s)	9, 94, 321, 430, 583, 673
Sau96I	GGNCC	3 cut(s)	461, 470, 884
SbfI	CCTGCAGG	1 cut(s)	579
SchI	GAGTC	1 cut(s)	390
ScrFI	CCNGG	1 cut(s)	594
SdaI	CCTGCAGG	1 cut(s)	579
SfaNI	GCATC	3 cut(s)	253, 541, 775
SfcI	CTRYAG	1 cut(s)	575
SinI	GGWCC	2 cut(s)	461, 470
SmiMI	CAYNNNNRTG	2 cut(s)	102, 549
SmlI	CTYRAG	2 cut(s)	599, 893
SmoI	CTYRAG	2 cut(s)	599, 893
Sse8387I	CCTGCAGG	1 cut(s)	579
Sse9I	AATT	1 cut(s)	141
SsiI	CCGC	2 cut(s)	635, 920
SspMI	CTAG	2 cut(s)	680, 931
StyD4I	CCNGG	1 cut(s)	592
TaaI	ACNGT	4 cut(s)	722, 733, 753, 833
TaiI	ACGT	2 cut(s)	517, 767
TaqI	TCGA	1 cut(s)	755
TasI	AATT	1 cut(s)	141
TfiI	GAWTC	5 cut(s)	31, 117, 418, 561, 923
Tru1I	TTAA	2 cut(s)	180, 609
Tru9I	TTAA	2 cut(s)	180, 609
TscAI	CASTG	1 cut(s)	738
TseFI	GTSAC	1 cut(s)	84
Tsp45I	GTSAC	1 cut(s)	84
TspDTI	ATGAA	5 cut(s)	112, 277, 375, 461, 917
TspGWI	ACGGA	1 cut(s)	563
TspRI	CASTG	1 cut(s)	738
Tth111I	GACNNNGTC	1 cut(s)	82
Van91I	CCANNNNNTGG	1 cut(s)	479
VpaK11BI	GGWCC	2 cut(s)	461, 470
XceI	RCATGY	1 cut(s)	105
XcmI	CCANNNNNNNNNTGG	1 cut(s)	907
XmiI	GTMKAC	1 cut(s)	748
XspI	CTAG	2 cut(s)	680, 931
Zsp2I	ATGCAT	1 cut(s)	103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.