malic enzyme
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G19900 AT2G19900 |
| fragaria_vesca | FvH4_1g06000 FvH4_1g06000 FvH4_1g06000 FvH4_1g06000 FvH4_1g06000 FvH4_1g06000 |
| malus_domestica | MD02G1064800.v1.1 MD15G1195500.v1.1 |
| prunus_persica | Prupe.7G221100_v2.0.a1 Prupe.7G221100_v2.0.a1 Prupe.7G221100_v2.0.a1 Prupe.7G221100_v2.0.a1 Prupe.7G221100_v2.0.a1 Prupe.7G221100_v2.0.a1 Prupe.7G221100_v2.0.a1 |
| pyrus_communis | pycom02g05090 pycom15g17470 |
| rosa_chinensis | RchiOBHm_Chr2g0091741 |
| rosa_laevigata | RLG00000016248 |
| rosa_roxburghii | Rroxscaffold_2G00149780 |
| rosa_rugosa | Rorug02G0020300 |
| rosa_samantha | Rh2BG064200 Rh2CG065800 Rh2DG064300 |
| rosa_wichuraiana | Rw2G005550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 398 |
| AccI | GTMKAC | 1 cut(s) | 586 |
| AccIII | TCCGGA | 1 cut(s) | 1602 |
| AciI | CCGC | 4 cut(s) | 930, 1066, 1114, 1669 |
| AclWI | GGATC | 3 cut(s) | 137, 1228, 1391 |
| AcoI | YGGCCR | 1 cut(s) | 1679 |
| AcsI | RAATTY | 2 cut(s) | 416, 761 |
| AcuI | CTGAAG | 3 cut(s) | 224, 299, 621 |
| AfaI | GTAC | 5 cut(s) | 296, 1333, 1451, 1503, 1718 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 398, 1466 |
| AgeI | ACCGGT | 1 cut(s) | 589 |
| AgsI | TTSAA | 7 cut(s) | 28, 259, 691, 757, 815, 880, 1130 |
| Alw21I | GWGCWC | 1 cut(s) | 90 |
| Alw26I | GTCTC | 5 cut(s) | 111, 180, 325, 1279, 1739 |
| AlwI | GGATC | 3 cut(s) | 137, 1228, 1391 |
| Ama87I | CYCGRG | 1 cut(s) | 1459 |
| Aor13HI | TCCGGA | 1 cut(s) | 1602 |
| AoxI | GGCC | 3 cut(s) | 500, 1363, 1679 |
| ApeKI | GCWGC | 3 cut(s) | 1523, 1526, 1625 |
| ApoI | RAATTY | 2 cut(s) | 416, 761 |
| AseI | ATTAAT | 1 cut(s) | 1278 |
| AsiGI | ACCGGT | 1 cut(s) | 589 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 761, 798 |
| AspS9I | GGNCC | 1 cut(s) | 1363 |
| AsuC2I | CCSGG | 2 cut(s) | 1460, 1461 |
| AsuHPI | GGTGA | 5 cut(s) | 413, 551, 646, 803, 1001 |
| AvaI | CYCGRG | 1 cut(s) | 1459 |
| AxyI | CCTNAGG | 1 cut(s) | 441 |
| BanII | GRGCYC | 1 cut(s) | 1153 |
| BbsI | GAAGAC | 2 cut(s) | 200, 868 |
| Bbv12I | GWGCWC | 1 cut(s) | 90 |
| BbvCI | CCTCAGC | 1 cut(s) | 1530 |
| BbvI | GCAGC | 3 cut(s) | 1510, 1513, 1637 |
| BccI | CCATC | 3 cut(s) | 35, 574, 1607 |
| BceAI | ACGGC | 2 cut(s) | 1350, 1694 |
| BclI | TGATCA | 1 cut(s) | 229 |
| BcnI | CCSGG | 2 cut(s) | 1460, 1461 |
| BcoDI | GTCTC | 5 cut(s) | 111, 180, 325, 1279, 1739 |
| BfaI | CTAG | 5 cut(s) | 120, 482, 1380, 1520, 1655 |
| BglII | AGATCT | 1 cut(s) | 562 |
| BisI | GCNGC | 5 cut(s) | 1066, 1524, 1527, 1626, 1670 |
| BlsI | GCNGC | 5 cut(s) | 1067, 1525, 1528, 1627, 1671 |
| Bme1390I | CCNGG | 2 cut(s) | 1460, 1461 |
| BmeT110I | CYCGRG | 1 cut(s) | 1459 |
| BmgT120I | GGNCC | 1 cut(s) | 1363 |
| BmrFI | CCNGG | 2 cut(s) | 1460, 1461 |
| BmsI | GCATC | 1 cut(s) | 911 |
| BpiI | GAAGAC | 2 cut(s) | 200, 868 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 130, 162, 175, 207 |
| BpmI | CTGGAG | 2 cut(s) | 201, 1509 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1530 |
| BpuMI | CCSGG | 2 cut(s) | 1460, 1461 |
| BsaBI | GATNNNNATC | 1 cut(s) | 867 |
| BsaI | GGTCTC | 2 cut(s) | 111, 1279 |
| BsaJI | CCNNGG | 5 cut(s) | 101, 1092, 1145, 1459, 1676 |
| BsaWI | WCCGGW | 2 cut(s) | 589, 1602 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 398, 1466 |
| Bse118I | RCCGGY | 1 cut(s) | 589 |
| Bse1I | ACTGG | 5 cut(s) | 218, 503, 1006, 1166, 1400 |
| Bse21I | CCTNAGG | 1 cut(s) | 441 |
| Bse3DI | GCAATG | 1 cut(s) | 131 |
| Bse8I | GATNNNNATC | 1 cut(s) | 867 |
| BseAI | TCCGGA | 1 cut(s) | 1602 |
| BseDI | CCNNGG | 5 cut(s) | 101, 1092, 1145, 1459, 1676 |
| BseGI | GGATG | 3 cut(s) | 575, 585, 1599 |
| BseJI | GATNNNNATC | 1 cut(s) | 867 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 398, 1466 |
| BseMI | GCAATG | 1 cut(s) | 131 |
| BseMII | CTCAG | 7 cut(s) | 33, 128, 165, 455, 727, 1521, 1631 |
| BseNI | ACTGG | 5 cut(s) | 218, 503, 1006, 1166, 1400 |
| BseRI | GAGGAG | 1 cut(s) | 380 |
| BseX3I | CGGCCG | 1 cut(s) | 1679 |
| BseXI | GCAGC | 3 cut(s) | 1510, 1513, 1637 |
| BsgI | GTGCAG | 1 cut(s) | 1722 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1682 |
| BshFI | GGCC | 3 cut(s) | 502, 1365, 1681 |
| BshTI | ACCGGT | 1 cut(s) | 589 |
| BsiEI | CGRYCG | 1 cut(s) | 1682 |
| BsiHKAI | GWGCWC | 1 cut(s) | 90 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1459 |
| BsiSI | CCGG | 3 cut(s) | 590, 1460, 1603 |
| BslFI | GGGAC | 2 cut(s) | 747, 910 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 398, 1466 |
| BsmAI | GTCTC | 5 cut(s) | 111, 180, 325, 1279, 1739 |
| BsmBI | CGTCTC | 1 cut(s) | 1739 |
| BsmFI | GGGAC | 2 cut(s) | 747, 910 |
| BsmI | GAATGC | 1 cut(s) | 1051 |
| BsnI | GGCC | 3 cut(s) | 502, 1365, 1681 |
| Bso31I | GGTCTC | 2 cut(s) | 111, 1279 |
| BsoBI | CYCGRG | 1 cut(s) | 1459 |
| Bsp1286I | GDGCHC | 2 cut(s) | 90, 1153 |
| Bsp13I | TCCGGA | 1 cut(s) | 1602 |
| Bsp1407I | TGTACA | 2 cut(s) | 1331, 1716 |
| Bsp143I | GATC | 5 cut(s) | 142, 229, 562, 1220, 1396 |
| Bsp19I | CCATGG | 1 cut(s) | 1145 |
| BspACI | CCGC | 4 cut(s) | 930, 1066, 1114, 1669 |
| BspANI | GGCC | 3 cut(s) | 502, 1365, 1681 |
| BspCNI | CTCAG | 7 cut(s) | 32, 129, 166, 454, 726, 1522, 1630 |
| BspEI | TCCGGA | 1 cut(s) | 1602 |
| BspHI | TCATGA | 2 cut(s) | 765, 1153 |
| BspPI | GGATC | 3 cut(s) | 137, 1228, 1391 |
| BspTNI | GGTCTC | 2 cut(s) | 111, 1279 |
| BsrDI | GCAATG | 1 cut(s) | 131 |
| BsrFI | RCCGGY | 1 cut(s) | 589 |
| BsrGI | TGTACA | 2 cut(s) | 1331, 1716 |
| BsrI | ACTGG | 5 cut(s) | 218, 503, 1006, 1166, 1400 |
| BssAI | RCCGGY | 1 cut(s) | 589 |
| BssECI | CCNNGG | 5 cut(s) | 101, 1092, 1145, 1459, 1676 |
| BssMI | GATC | 5 cut(s) | 142, 229, 562, 1220, 1396 |
| BssNAI | GTATAC | 1 cut(s) | 587 |
| BssT1I | CCWWGG | 3 cut(s) | 101, 1092, 1145 |
| Bst1107I | GTATAC | 1 cut(s) | 587 |
| Bst4CI | ACNGT | 8 cut(s) | 336, 397, 539, 687, 1210, 1239, 1733, 1742 |
| Bst6I | CTCTTC | 2 cut(s) | 242, 1600 |
| BstAUI | TGTACA | 2 cut(s) | 1331, 1716 |
| BstC8I | GCNNGC | 1 cut(s) | 849 |
| BstDEI | CTNAG | 9 cut(s) | 19, 137, 174, 441, 713, 1180, 1530, 1617, 1641 |
| BstDSI | CCRYGG | 2 cut(s) | 1145, 1676 |
| BstF5I | GGATG | 3 cut(s) | 575, 585, 1599 |
| BstKTI | GATC | 5 cut(s) | 145, 232, 565, 1223, 1399 |
| BstMAI | GTCTC | 5 cut(s) | 111, 180, 325, 1279, 1739 |
| BstMBI | GATC | 5 cut(s) | 142, 229, 562, 1220, 1396 |
| BstMCI | CGRYCG | 1 cut(s) | 1682 |
| BstNSI | RCATGY | 1 cut(s) | 1717 |
| BstSCI | CCNGG | 2 cut(s) | 1458, 1459 |
| BstV1I | GCAGC | 3 cut(s) | 1510, 1513, 1637 |
| BstV2I | GAAGAC | 2 cut(s) | 200, 868 |
| BstX2I | RGATCY | 3 cut(s) | 142, 562, 1220 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 664 |
| BstYI | RGATCY | 3 cut(s) | 142, 562, 1220 |
| BstZ17I | GTATAC | 1 cut(s) | 587 |
| BstZI | CGGCCG | 1 cut(s) | 1679 |
| Bsu36I | CCTNAGG | 1 cut(s) | 441 |
| BsuRI | GGCC | 3 cut(s) | 502, 1365, 1681 |
| BtgI | CCRYGG | 2 cut(s) | 1145, 1676 |
| BtsCI | GGATG | 3 cut(s) | 575, 585, 1599 |
| BtsIMutI | CAGTG | 2 cut(s) | 171, 1289 |
| Cac8I | GCNNGC | 1 cut(s) | 849 |
| CciI | TCATGA | 2 cut(s) | 765, 1153 |
| Cfr10I | RCCGGY | 1 cut(s) | 589 |
| Cfr13I | GGNCC | 1 cut(s) | 1363 |
| Cfr9I | CCCGGG | 1 cut(s) | 1459 |
| Csp6I | GTAC | 5 cut(s) | 295, 1332, 1450, 1502, 1717 |
| CspAI | ACCGGT | 1 cut(s) | 589 |
| CviAII | CATG | 8 cut(s) | 298, 766, 1146, 1154, 1160, 1267, 1505, 1714 |
| CviQI | GTAC | 5 cut(s) | 295, 1332, 1450, 1502, 1717 |
| DdeI | CTNAG | 9 cut(s) | 19, 137, 174, 441, 713, 1180, 1530, 1617, 1641 |
| DpnI | GATC | 5 cut(s) | 144, 231, 564, 1222, 1398 |
| DpnII | GATC | 5 cut(s) | 142, 229, 562, 1220, 1396 |
| DraI | TTTAAA | 1 cut(s) | 462 |
| EaeI | YGGCCR | 1 cut(s) | 1679 |
| EagI | CGGCCG | 1 cut(s) | 1679 |
| Eam1104I | CTCTTC | 2 cut(s) | 242, 1600 |
| EarI | CTCTTC | 2 cut(s) | 242, 1600 |
| EclXI | CGGCCG | 1 cut(s) | 1679 |
| Eco130I | CCWWGG | 3 cut(s) | 101, 1092, 1145 |
| Eco24I | GRGCYC | 1 cut(s) | 1153 |
| Eco31I | GGTCTC | 2 cut(s) | 111, 1279 |
| Eco52I | CGGCCG | 1 cut(s) | 1679 |
| Eco57I | CTGAAG | 3 cut(s) | 224, 299, 621 |
| Eco81I | CCTNAGG | 1 cut(s) | 441 |
| Eco88I | CYCGRG | 1 cut(s) | 1459 |
| EcoRI | GAATTC | 1 cut(s) | 761 |
| EcoT14I | CCWWGG | 3 cut(s) | 101, 1092, 1145 |
| EcoT38I | GRGCYC | 1 cut(s) | 1153 |
| ErhI | CCWWGG | 3 cut(s) | 101, 1092, 1145 |
| Esp3I | CGTCTC | 1 cut(s) | 1739 |
| FaeI | CATG | 8 cut(s) | 301, 769, 1149, 1157, 1163, 1270, 1508, 1717 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1110, 1142 |
| FaqI | GGGAC | 2 cut(s) | 747, 910 |
| FatI | CATG | 8 cut(s) | 297, 765, 1145, 1153, 1159, 1266, 1504, 1713 |
| FauI | CCCGC | 1 cut(s) | 1121 |
| FbaI | TGATCA | 1 cut(s) | 229 |
| FblI | GTMKAC | 1 cut(s) | 586 |
| Fnu4HI | GCNGC | 5 cut(s) | 1066, 1524, 1527, 1626, 1670 |
| FokI | GGATG | 3 cut(s) | 582, 592, 1586 |
| FriOI | GRGCYC | 1 cut(s) | 1153 |
| Fsp4HI | GCNGC | 5 cut(s) | 1066, 1524, 1527, 1626, 1670 |
| FspBI | CTAG | 5 cut(s) | 120, 482, 1380, 1520, 1655 |
| GluI | GCNGC | 5 cut(s) | 1066, 1524, 1527, 1626, 1670 |
| GsuI | CTGGAG | 2 cut(s) | 201, 1509 |
| HaeIII | GGCC | 3 cut(s) | 502, 1365, 1681 |
| HapII | CCGG | 3 cut(s) | 590, 1460, 1603 |
| Hin1II | CATG | 8 cut(s) | 301, 769, 1149, 1157, 1163, 1270, 1508, 1717 |
| HincII | GTYRAC | 2 cut(s) | 942, 1108 |
| HindII | GTYRAC | 2 cut(s) | 942, 1108 |
| HindIII | AAGCTT | 3 cut(s) | 236, 405, 1344 |
| HinfI | GANTC | 5 cut(s) | 71, 478, 711, 1088, 1121 |
| HpaI | GTTAAC | 2 cut(s) | 942, 1108 |
| HpaII | CCGG | 3 cut(s) | 590, 1460, 1603 |
| HphI | GGTGA | 5 cut(s) | 413, 551, 646, 803, 1001 |
| Hpy166II | GTNNAC | 5 cut(s) | 587, 647, 749, 942, 1108 |
| Hpy188I | TCNGA | 7 cut(s) | 22, 269, 306, 414, 1215, 1327, 1620 |
| Hpy8I | GTNNAC | 5 cut(s) | 587, 647, 749, 942, 1108 |
| HpyAV | CCTTC | 4 cut(s) | 645, 979, 1406, 1596 |
| HpyCH4III | ACNGT | 8 cut(s) | 336, 397, 539, 687, 1210, 1239, 1733, 1742 |
| HpyCH4V | TGCA | 4 cut(s) | 851, 959, 1625, 1703 |
| HpyF3I | CTNAG | 9 cut(s) | 19, 137, 174, 441, 713, 1180, 1530, 1617, 1641 |
| Hsp92II | CATG | 8 cut(s) | 301, 769, 1149, 1157, 1163, 1270, 1508, 1717 |
| Kpn2I | TCCGGA | 1 cut(s) | 1602 |
| Ksp22I | TGATCA | 1 cut(s) | 229 |
| KspAI | GTTAAC | 2 cut(s) | 942, 1108 |
| Kzo9I | GATC | 5 cut(s) | 142, 229, 562, 1220, 1396 |
| LmnI | GCTCC | 2 cut(s) | 367, 1490 |
| Lsp1109I | GCAGC | 3 cut(s) | 1510, 1513, 1637 |
| LweI | GCATC | 1 cut(s) | 911 |
| MaeI | CTAG | 5 cut(s) | 120, 482, 1380, 1520, 1655 |
| MaeIII | GTNAC | 3 cut(s) | 10, 529, 652 |
| MalI | GATC | 5 cut(s) | 144, 231, 564, 1222, 1398 |
| MboI | GATC | 5 cut(s) | 142, 229, 562, 1220, 1396 |
| MboII | GAAGA | 8 cut(s) | 80, 200, 259, 827, 868, 1215, 1352, 1587 |
| MflI | RGATCY | 3 cut(s) | 142, 562, 1220 |
| MhlI | GDGCHC | 2 cut(s) | 90, 1153 |
| MluCI | AATT | 3 cut(s) | 278, 416, 761 |
| MlyI | GAGTC | 1 cut(s) | 705 |
| MmeI | TCCRAC | 3 cut(s) | 292, 416, 1213 |
| MroI | TCCGGA | 1 cut(s) | 1602 |
| MroXI | GAANNNNTTC | 2 cut(s) | 761, 798 |
| MseI | TTAA | 6 cut(s) | 461, 491, 941, 1107, 1137, 1278 |
| MslI | CAYNNNNRTG | 2 cut(s) | 662, 1158 |
| MspI | CCGG | 3 cut(s) | 590, 1460, 1603 |
| MspR9I | CCNGG | 2 cut(s) | 1460, 1461 |
| Mva1269I | GAATGC | 1 cut(s) | 1051 |
| NciI | CCSGG | 2 cut(s) | 1460, 1461 |
| NcoI | CCATGG | 1 cut(s) | 1145 |
| NdeII | GATC | 5 cut(s) | 142, 229, 562, 1220, 1396 |
| NlaIII | CATG | 8 cut(s) | 301, 769, 1149, 1157, 1163, 1270, 1508, 1717 |
| NmuCI | GTSAC | 2 cut(s) | 10, 652 |
| NspI | RCATGY | 1 cut(s) | 1717 |
| PagI | TCATGA | 2 cut(s) | 765, 1153 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 879 |
| PctI | GAATGC | 1 cut(s) | 1051 |
| PdmI | GAANNNNTTC | 2 cut(s) | 761, 798 |
| PfeI | GAWTC | 4 cut(s) | 71, 478, 1088, 1121 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 398 |
| PinAI | ACCGGT | 1 cut(s) | 589 |
| PkrI | GCNGC | 5 cut(s) | 1067, 1525, 1528, 1627, 1671 |
| PleI | GAGTC | 1 cut(s) | 705 |
| PpsI | GAGTC | 1 cut(s) | 705 |
| PshBI | ATTAAT | 1 cut(s) | 1278 |
| PspPI | GGNCC | 1 cut(s) | 1363 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1433, 1465 |
| PsuI | RGATCY | 3 cut(s) | 142, 562, 1220 |
| RsaI | GTAC | 5 cut(s) | 296, 1333, 1451, 1503, 1718 |
| RsaNI | GTAC | 5 cut(s) | 295, 1332, 1450, 1502, 1717 |
| RseI | CAYNNNNRTG | 2 cut(s) | 662, 1158 |
| SaqAI | TTAA | 6 cut(s) | 461, 491, 941, 1107, 1137, 1278 |
| SatI | GCNGC | 5 cut(s) | 1066, 1524, 1527, 1626, 1670 |
| Sau3AI | GATC | 5 cut(s) | 142, 229, 562, 1220, 1396 |
| Sau96I | GGNCC | 1 cut(s) | 1363 |
| SchI | GAGTC | 1 cut(s) | 705 |
| ScrFI | CCNGG | 2 cut(s) | 1460, 1461 |
| SduI | GDGCHC | 2 cut(s) | 90, 1153 |
| SfaNI | GCATC | 1 cut(s) | 911 |
| SmaI | CCCGGG | 1 cut(s) | 1461 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 662, 1158 |
| Sse9I | AATT | 3 cut(s) | 278, 416, 761 |
| SsiI | CCGC | 4 cut(s) | 930, 1066, 1114, 1669 |
| SspMI | CTAG | 5 cut(s) | 120, 482, 1380, 1520, 1655 |
| StyD4I | CCNGG | 2 cut(s) | 1458, 1459 |
| StyI | CCWWGG | 3 cut(s) | 101, 1092, 1145 |
| TaaI | ACNGT | 8 cut(s) | 336, 397, 539, 687, 1210, 1239, 1733, 1742 |
| TasI | AATT | 3 cut(s) | 278, 416, 761 |
| TatI | WGTACW | 3 cut(s) | 294, 1331, 1716 |
| TauI | GCSGC | 2 cut(s) | 1068, 1672 |
| TfiI | GAWTC | 4 cut(s) | 71, 478, 1088, 1121 |
| Tru1I | TTAA | 6 cut(s) | 461, 491, 941, 1107, 1137, 1278 |
| Tru9I | TTAA | 6 cut(s) | 461, 491, 941, 1107, 1137, 1278 |
| TscAI | CASTG | 2 cut(s) | 178, 1296 |
| TseFI | GTSAC | 2 cut(s) | 10, 652 |
| TseI | GCWGC | 3 cut(s) | 1523, 1526, 1625 |
| Tsp45I | GTSAC | 2 cut(s) | 10, 652 |
| TspMI | CCCGGG | 1 cut(s) | 1459 |
| TspRI | CASTG | 2 cut(s) | 178, 1296 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 398 |
| VspI | ATTAAT | 1 cut(s) | 1278 |
| XapI | RAATTY | 2 cut(s) | 416, 761 |
| XbaI | TCTAGA | 1 cut(s) | 481 |
| XceI | RCATGY | 1 cut(s) | 1717 |
| XmaI | CCCGGG | 1 cut(s) | 1459 |
| XmiI | GTMKAC | 1 cut(s) | 586 |
| XmnI | GAANNNNTTC | 2 cut(s) | 761, 798 |
| XspI | CTAG | 5 cut(s) | 120, 482, 1380, 1520, 1655 |