Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003357

Physical Location & Seq

Genomic Coordinates Forward (+)

11135624 .. 11137792

Gene Structure 2169 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G26150.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1038 bp

ATGGAAGAACTGAAAGTGGAAATGGAGGAAGAAACGGTGACGTTTACTGGTTCTGTAGCGGCTTCTTCATCTGTAGGATCCTCTTCCTCTCCTAGACCAATGGAAGGGCTTAACGAAACAGGGCCACCACCGTTTCTGACTAAGACTTACGAAATGGTGGAAGATCCGGCGACGGACACGGTGGTTTCTTGGAGTAATGGTCGTAACAGCTTTGTGGTGTGGGATTCTCATAAGTTCTCAACAACTCTCCTTCCACGTTACTTCAAGCATAGCAATTTCTCAAGTTTTATTCGTCAGCTCAATACTTATGGATTCAGAAAGATTGATCCAGATAGATGGGAATTTGCAAATGAAGGGTTTTTAGCAGGACAAAAGCATCTCTTGAAGAACATCAAAAGAAGGAGGAACATGGGTTTGCAGAATGTGAATCAGCAAGGATCTGGGATGTCATGTGTTGAGGTTGGGCAATACGGTTTCGACGGGGAGGTTGAGAGGTTGAAGAGGGATCATGGTGTGCTTGTAGCTGAGGTAGTTAGGTTGAGGCAACAGCAACACAGCTCCAAGAGTCAAGTTGCAGCTATGGAGCAACGGTTGCTTGTTACTGAGAAGAGACAGCAGCAGATGATGACGTTCCTTGCCAAGGCGTTGAACAATCCGAACTTTGTTCAGCAGTTTGCGGTTATGAGTAAAGAGAAGAAGAGTTTGTTTGGTTTGGATGTGGGGAGGAAACGGAGGCTTACTTCTACTCCAAGCTTGGGGACTATGGAGGAGAATTTGTTACATGATCAAGAGTTTGATAGAATGAAGGATGATATGGAAATGTTGTTCGCTGCAGCAATCGATGATGAGGCGAATAATTCGATGCCTACTAAGGAGGAACAATGTTTGGAGGCTATGAATGTGATGATGAGAGATGGTAATTTGGAAGCAGCGTTGGATGTGAAAGTGGAAGATTTGGTTGGTTCGCCTTTGGATTGGGACAGCCAAGATCTACATGACATGGTTGATCAAATGGGTTTTCTTGGTTCGGAACCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001067 GO:0001666 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006979 GO:0006986 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009628 GO:0009636 GO:0009642 GO:0009644 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010035 GO:0010200 GO:0010243 GO:0010286 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0033554 GO:0034605 GO:0034620 GO:0035966 GO:0035967 GO:0036293 GO:0036294 GO:0042221 GO:0042493 GO:0042542 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046677 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070482 GO:0070887 GO:0071310 GO:0071453 GO:0071456 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HSF_DNA-bind

Protein Analysis

345

Amino Acids

39.11

Weight (kDa)

5.13

Isoelectric Point (pI)

46.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSF_DNA-bind	PF00447	45 - 134	3.3e-30	HSF-type DNA-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26150 AT2G26150 AT2G26150 AT2G26150
fragaria_vesca	FvH4_2g31690 FvH4_2g31690 FvH4_2g31690 FvH4_2g31690 FvH4_2g31690 FvH4_2g31690 FvH4_2g31690
malus_domestica	MD08G1064100.v1.1 MD15G1057700.v1.1
prunus_persica	Prupe.1G410400_v2.0.a1 Prupe.1G410400_v2.0.a1 Prupe.1G410400_v2.0.a1 Prupe.1G410400_v2.0.a1 Prupe.1G410400_v2.0.a1 Prupe.1G410400_v2.0.a1 Prupe.1G410400_v2.0.a1 Prupe.1G410400_v2.0.a1
pyrus_communis	pycom08g05260 pycom15g05430
rosa_chinensis	RchiOBHm_Chr6g0311151
rosa_laevigata	RLG00000010432
rosa_multiflora	Rmu_sc0008967.1_g000010
rosa_roxburghii	Rroxscaffold_7G00157980
rosa_rugosa	Rorug06G0385800 Rorug06G0385900 Rorug06G0385900
rosa_samantha	Rh2CG294900 Rh6AG499900 Rh6BG510600 Rh6CG516300 Rh6DG502800
rosa_wichuraiana	Rw6G043540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	59, 677
AclWI	GGATC	6 cut(s)	72, 85, 158, 320, 445, 513
AcsI	RAATTY	2 cut(s)	341, 772
AfiI	CCNNNNNNNGG	3 cut(s)	104, 640, 755
AgsI	TTSAA	4 cut(s)	265, 385, 499, 649
AjuI	GAANNNNNNNTTGG	2 cut(s)	942, 974
AloI	GAACNNNNNNTCC	2 cut(s)	809, 841
AluBI	AGCT	6 cut(s)	210, 298, 524, 558, 578, 753
AluI	AGCT	6 cut(s)	210, 298, 524, 558, 578, 753
Alw26I	GTCTC	1 cut(s)	604
AlwI	GGATC	6 cut(s)	72, 85, 158, 320, 445, 513
AoxI	GGCC	1 cut(s)	122
ApeKI	GCWGC	5 cut(s)	575, 616, 830, 833, 929
ApoI	RAATTY	2 cut(s)	341, 772
AspS9I	GGNCC	1 cut(s)	122
AsuHPI	GGTGA	1 cut(s)	49
BamHI	GGATCC	1 cut(s)	77
BbvCI	CCTCAGC	1 cut(s)	525
BbvI	GCAGC	5 cut(s)	587, 628, 817, 845, 941
BccI	CCATC	2 cut(s)	330, 908
BclI	TGATCA	2 cut(s)	784, 1006
BcoDI	GTCTC	1 cut(s)	604
BfaI	CTAG	1 cut(s)	93
BfmI	CTRYAG	3 cut(s)	54, 72, 831
BglII	AGATCT	1 cut(s)	988
BisI	GCNGC	6 cut(s)	60, 576, 617, 831, 834, 930
BlsI	GCNGC	6 cut(s)	61, 577, 618, 832, 835, 931
BmgT120I	GGNCC	1 cut(s)	122
BmiI	GGNNCC	2 cut(s)	79, 1032
BmsI	GCATC	2 cut(s)	385, 852
Bpu10I	CCTNAGC	1 cut(s)	525
BpuEI	CTTGAG	1 cut(s)	265
Bsa29I	ATCGAT	1 cut(s)	840
BsaJI	CCNNGG	1 cut(s)	639
BsaXI	ACNNNNNCTCC	8 cut(s)	184, 214, 575, 605, 730, 760, 761, 791
Bsc4I	CCNNNNNNNGG	3 cut(s)	104, 640, 755
Bse1I	ACTGG	1 cut(s)	52
BseCI	ATCGAT	1 cut(s)	840
BseDI	CCNNGG	1 cut(s)	639
BseGI	GGATG	4 cut(s)	450, 721, 814, 943
BseLI	CCNNNNNNNGG	3 cut(s)	104, 640, 755
BseMII	CTCAG	2 cut(s)	516, 594
BseNI	ACTGG	1 cut(s)	52
BseRI	GAGGAG	1 cut(s)	782
BseXI	GCAGC	5 cut(s)	587, 628, 817, 845, 941
BshFI	GGCC	1 cut(s)	124
BshVI	ATCGAT	1 cut(s)	840
BsiSI	CCGG	1 cut(s)	167
BslFI	GGGAC	2 cut(s)	772, 992
BslI	CCNNNNNNNGG	3 cut(s)	104, 640, 755
BsmAI	GTCTC	1 cut(s)	604
BsmFI	GGGAC	2 cut(s)	772, 992
BsnI	GGCC	1 cut(s)	124
Bsp143I	GATC	8 cut(s)	77, 163, 325, 437, 505, 784, 988, 1006
BspACI	CCGC	2 cut(s)	59, 677
BspANI	GGCC	1 cut(s)	124
BspCNI	CTCAG	2 cut(s)	517, 595
BspDI	ATCGAT	1 cut(s)	840
BspLI	GGNNCC	2 cut(s)	79, 1032
BspMAI	CTGCAG	1 cut(s)	835
BspPI	GGATC	6 cut(s)	72, 85, 158, 320, 445, 513
BsrI	ACTGG	1 cut(s)	52
BssECI	CCNNGG	1 cut(s)	639
BssMI	GATC	8 cut(s)	77, 163, 325, 437, 505, 784, 988, 1006
BssT1I	CCWWGG	1 cut(s)	639
Bst4CI	ACNGT	5 cut(s)	37, 132, 181, 473, 591
Bst6I	CTCTTC	4 cut(s)	88, 494, 602, 692
BstAPI	GCANNNNNTGC	1 cut(s)	592
BstDEI	CTNAG	4 cut(s)	141, 525, 603, 870
BstENI	CCTNNNNNAGG	1 cut(s)	638
BstF5I	GGATG	4 cut(s)	450, 721, 814, 943
BstKTI	GATC	8 cut(s)	80, 166, 328, 440, 508, 787, 991, 1009
BstMAI	GTCTC	1 cut(s)	604
BstMBI	GATC	8 cut(s)	77, 163, 325, 437, 505, 784, 988, 1006
BstMWI	GCNNNNNNNGC	1 cut(s)	592
BstSFI	CTRYAG	3 cut(s)	54, 72, 831
BstV1I	GCAGC	5 cut(s)	587, 628, 817, 845, 941
BstX2I	RGATCY	4 cut(s)	77, 163, 437, 988
BstXI	CCANNNNNNTGG	1 cut(s)	336
BstYI	RGATCY	4 cut(s)	77, 163, 437, 988
Bsu15I	ATCGAT	1 cut(s)	840
BsuRI	GGCC	1 cut(s)	124
BsuTUI	ATCGAT	1 cut(s)	840
BtsCI	GGATG	4 cut(s)	450, 721, 814, 943
Cfr13I	GGNCC	1 cut(s)	122
ClaI	ATCGAT	1 cut(s)	840
CviAII	CATG	6 cut(s)	409, 450, 509, 782, 995, 1000
DdeI	CTNAG	4 cut(s)	141, 525, 603, 870
DpnI	GATC	8 cut(s)	79, 165, 327, 439, 507, 786, 990, 1008
DpnII	GATC	8 cut(s)	77, 163, 325, 437, 505, 784, 988, 1006
Eam1104I	CTCTTC	4 cut(s)	88, 494, 602, 692
EarI	CTCTTC	4 cut(s)	88, 494, 602, 692
Eco130I	CCWWGG	1 cut(s)	639
EcoNI	CCTNNNNNAGG	1 cut(s)	638
EcoT14I	CCWWGG	1 cut(s)	639
ErhI	CCWWGG	1 cut(s)	639
FaeI	CATG	6 cut(s)	412, 453, 512, 785, 998, 1003
FalI	AAGNNNNNCTT	2 cut(s)	365, 397
FaqI	GGGAC	2 cut(s)	772, 992
FatI	CATG	6 cut(s)	408, 449, 508, 781, 994, 999
FbaI	TGATCA	2 cut(s)	784, 1006
Fnu4HI	GCNGC	6 cut(s)	60, 576, 617, 831, 834, 930
FokI	GGATG	4 cut(s)	457, 728, 821, 950
Fsp4HI	GCNGC	6 cut(s)	60, 576, 617, 831, 834, 930
FspBI	CTAG	1 cut(s)	93
GluI	GCNGC	6 cut(s)	60, 576, 617, 831, 834, 930
HaeIII	GGCC	1 cut(s)	124
HapII	CCGG	1 cut(s)	167
Hin1II	CATG	6 cut(s)	412, 453, 512, 785, 998, 1003
HindIII	AAGCTT	1 cut(s)	751
HinfI	GANTC	4 cut(s)	224, 312, 427, 565
HpaII	CCGG	1 cut(s)	167
HphI	GGTGA	1 cut(s)	49
Hpy166II	GTNNAC	1 cut(s)	45
Hpy188I	TCNGA	4 cut(s)	138, 317, 657, 1030
Hpy188III	TCNNGA	3 cut(s)	329, 382, 788
Hpy8I	GTNNAC	1 cut(s)	45
Hpy99I	CGWCG	2 cut(s)	175, 482
HpyAV	CCTTC	5 cut(s)	98, 260, 347, 393, 799
HpyCH4III	ACNGT	5 cut(s)	37, 132, 181, 473, 591
HpyCH4IV	ACGT	3 cut(s)	41, 256, 629
HpyCH4V	TGCA	4 cut(s)	347, 418, 575, 833
HpyF10VI	GCNNNNNNNGC	1 cut(s)	592
HpyF3I	CTNAG	4 cut(s)	141, 525, 603, 870
HpySE526I	ACGT	3 cut(s)	41, 256, 629
Hsp92II	CATG	6 cut(s)	412, 453, 512, 785, 998, 1003
Ksp22I	TGATCA	2 cut(s)	784, 1006
Kzo9I	GATC	8 cut(s)	77, 163, 325, 437, 505, 784, 988, 1006
LmnI	GCTCC	2 cut(s)	563, 583
LpnPI	CCDG	6 cut(s)	33, 105, 180, 342, 351, 426
Lsp1109I	GCAGC	5 cut(s)	587, 628, 817, 845, 941
LweI	GCATC	2 cut(s)	385, 852
MaeI	CTAG	1 cut(s)	93
MaeII	ACGT	3 cut(s)	41, 256, 629
MaeIII	GTNAC	5 cut(s)	37, 203, 257, 598, 777
MalI	GATC	8 cut(s)	79, 165, 327, 439, 507, 786, 990, 1008
MboI	GATC	8 cut(s)	77, 163, 325, 437, 505, 784, 988, 1006
MflI	RGATCY	4 cut(s)	77, 163, 437, 988
MluCI	AATT	5 cut(s)	274, 341, 772, 856, 919
MlyI	GAGTC	1 cut(s)	574
MmeI	TCCRAC	1 cut(s)	915
MseI	TTAA	2 cut(s)	111, 1036
MspI	CCGG	1 cut(s)	167
MwoI	GCNNNNNNNGC	1 cut(s)	592
NdeII	GATC	8 cut(s)	77, 163, 325, 437, 505, 784, 988, 1006
NlaIII	CATG	6 cut(s)	412, 453, 512, 785, 998, 1003
NlaIV	GGNNCC	2 cut(s)	79, 1032
NmuCI	GTSAC	1 cut(s)	37
PfeI	GAWTC	3 cut(s)	224, 312, 427
PkrI	GCNGC	6 cut(s)	61, 577, 618, 832, 835, 931
PleI	GAGTC	1 cut(s)	573
PpsI	GAGTC	1 cut(s)	573
PspN4I	GGNNCC	2 cut(s)	79, 1032
PspPI	GGNCC	1 cut(s)	122
PstI	CTGCAG	1 cut(s)	835
PsuI	RGATCY	4 cut(s)	77, 163, 437, 988
SaqAI	TTAA	2 cut(s)	111, 1036
SatI	GCNGC	6 cut(s)	60, 576, 617, 831, 834, 930
Sau3AI	GATC	8 cut(s)	77, 163, 325, 437, 505, 784, 988, 1006
Sau96I	GGNCC	1 cut(s)	122
SchI	GAGTC	1 cut(s)	574
SfaNI	GCATC	2 cut(s)	385, 852
SfcI	CTRYAG	3 cut(s)	54, 72, 831
SmlI	CTYRAG	1 cut(s)	280
SmoI	CTYRAG	1 cut(s)	280
Sse9I	AATT	5 cut(s)	274, 341, 772, 856, 919
SsiI	CCGC	2 cut(s)	59, 677
SspMI	CTAG	1 cut(s)	93
StyI	CCWWGG	1 cut(s)	639
TaaI	ACNGT	5 cut(s)	37, 132, 181, 473, 591
TaiI	ACGT	3 cut(s)	44, 259, 632
TaqI	TCGA	3 cut(s)	477, 840, 860
TasI	AATT	5 cut(s)	274, 341, 772, 856, 919
TauI	GCSGC	1 cut(s)	62
TfiI	GAWTC	3 cut(s)	224, 312, 427
Tru1I	TTAA	2 cut(s)	111, 1036
Tru9I	TTAA	2 cut(s)	111, 1036
TseFI	GTSAC	1 cut(s)	37
TseI	GCWGC	5 cut(s)	575, 616, 830, 833, 929
Tsp45I	GTSAC	1 cut(s)	37
TspDTI	ATGAA	4 cut(s)	57, 366, 818, 911
TspGWI	ACGGA	2 cut(s)	188, 745
XagI	CCTNNNNNAGG	1 cut(s)	638
XapI	RAATTY	2 cut(s)	341, 772
XspI	CTAG	1 cut(s)	93

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.