Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003357

Physical Location & Seq

Genomic Coordinates Reverse (-)

35869392 .. 35872208

Gene Structure 2817 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G410400.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1125 bp

ATGGATGGAGTGGCGGTGAAAGAGGAAGAGATTGTGACATGCACTGTTGGTTCATCATCCTCTTCTTCTTCAAGCTTCTCACCTCAGCCAATAGAGGGCTTACACGAAGTGGGCCCTCCCCCTTTTCTCACAAAGACCTTTGAAATGGTGGAGGATCCTTCTACAGACGCCATTGTCTCCTGGAGCAGAGCTCGCAACAGCTTCGTTGTTTGGGACTCTCATAAGTTCTCCACCACTCTTCTTCCTCGCTACTTCAAGCACGGGAACTTCTCCAGCTTCATTCGTCAGCTTAATACATATGGTTTTAGAAAGGTTGATCCTGACCGATGGGAATTTGCCAACGAAGGGTTTCTGGGAGGGCAGAGGCATTTACTGAAGACCATCAAGAGGAGGAGGCATATGTCACAGAGTATGCAACAAGAAGGTGGAGGAGGAGCTTGTGTTGAACTGGGCCAGTATGGACTGGAGACTGAGCTTGAAAGATTGAAGAGAGACCGAAATGTTTTAATGACTGAAATAGTGAGGCTGAGGCAGCAACAACAAAATTCAAAAGAACAAGTCATGGCAATGGAGGGTCGGTTGCAGACCACAGAGAAAAAACAACAGCAGATTATGGCTTTCCTTGCTAAAGCACTCAATAGCCCATCTTTTATCCAAAACCTTGTTGAGAAGAAGGCTCGGAATAAAGAGTTGCGTGGTATGGAAATTGGTCGAAAGCGGAGATTATCAGCTAGCCCCAGTGTGGAGAATCTGCAAGAAAAACCTAAAACCCATGTTGCGGACTACTCAGCAAGCCAAGATCAGGGAGAGTTGGAAACTATCGGATCGCAGATTGAGACCTTTTTCTCAGCTGCTGCATTGGATAATGAATCAAGCAGTGATATCATAGACCCTCATTCAAGTTCGGTTGGTGGCAACTTCGGCATTGTTAATGAGACTACATGGGAGGAGCTGTGGAGCGATGAGCTCATTGGTGGCAATCCGGAGGAAGACGTTATTGTGGTGGGCGATGAATCAGATATCGATGTCGCGGTGGAGGATTTGGTTGCAGAGCCAGCAGATTGGGGTGAGGACTTGCAAGAACTTGTTGATCAAATGGGTTATCTAATCAGGTCCAAGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001067 GO:0001666 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006979 GO:0006986 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009628 GO:0009636 GO:0009642 GO:0009644 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010035 GO:0010200 GO:0010243 GO:0010286 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0033554 GO:0034605 GO:0034620 GO:0035966 GO:0035967 GO:0036293 GO:0036294 GO:0042221 GO:0042493 GO:0042542 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046677 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070482 GO:0070887 GO:0071310 GO:0071453 GO:0071456 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HSF_DNA-bind

Protein Analysis

375

Amino Acids

41.95

Weight (kDa)

4.95

Isoelectric Point (pI)

61.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26150 AT2G26150 AT2G26150 AT2G26150
fragaria_vesca	FvH4_2g31690 FvH4_2g31690 FvH4_2g31690 FvH4_2g31690 FvH4_2g31690 FvH4_2g31690 FvH4_2g31690
malus_domestica	MD08G1064100.v1.1 MD15G1057700.v1.1
prunus_persica	Prupe.1G410400_v2.0.a1 Prupe.1G410400_v2.0.a1 Prupe.1G410400_v2.0.a1 Prupe.1G410400_v2.0.a1 Prupe.1G410400_v2.0.a1 Prupe.1G410400_v2.0.a1 Prupe.1G410400_v2.0.a1 Prupe.1G410400_v2.0.a1
pyrus_communis	pycom08g05260 pycom15g05430
rosa_chinensis	RchiOBHm_Chr6g0311151
rosa_laevigata	RLG00000010432
rosa_multiflora	Rmu_sc0008967.1_g000010
rosa_roxburghii	Rroxscaffold_7G00157980
rosa_rugosa	Rorug06G0385800 Rorug06G0385900 Rorug06G0385900
rosa_samantha	Rh2CG294900 Rh6AG499900 Rh6BG510600 Rh6CG516300 Rh6DG502800
rosa_wichuraiana	Rw6G043540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	173
AccII	CGCG	1 cut(s)	1031
AccIII	TCCGGA	1 cut(s)	982
AciI	CCGC	4 cut(s)	14, 718, 779, 1031
AclWI	GGATC	4 cut(s)	149, 162, 311, 832
AcsI	RAATTY	2 cut(s)	332, 544
AcuI	CTGAAG	1 cut(s)	395
AcyI	GRCGYC	1 cut(s)	168
AdeI	CACNNNGTG	1 cut(s)	109
AfiI	CCNNNNNNNGG	6 cut(s)	95, 345, 387, 742, 778, 802
AgsI	TTSAA	8 cut(s)	72, 143, 256, 446, 479, 487, 549, 900
AjnI	CCWGG	1 cut(s)	179
Alw21I	GWGCWC	2 cut(s)	193, 969
Alw26I	GTCTC	5 cut(s)	181, 461, 486, 830, 929
AlwI	GGATC	4 cut(s)	149, 162, 311, 832
AlwNI	CAGNNNCTG	1 cut(s)	854
Aor13HI	TCCGGA	1 cut(s)	982
AoxI	GGCC	2 cut(s)	112, 451
ApaI	GGGCCC	1 cut(s)	116
ApeKI	GCWGC	3 cut(s)	532, 851, 854
ApoI	RAATTY	2 cut(s)	332, 544
Asp700I	GAANNNNTTC	1 cut(s)	348
AspS9I	GGNCC	4 cut(s)	112, 113, 451, 1113
AsuHPI	GGTGA	3 cut(s)	28, 72, 1079
AsuNHI	GCTAGC	1 cut(s)	731
AvaII	GGWCC	1 cut(s)	1113
BaeGI	GKGCMC	1 cut(s)	116
BamHI	GGATCC	1 cut(s)	154
BanII	GRGCYC	3 cut(s)	116, 193, 969
BbsI	GAAGAC	2 cut(s)	383, 996
Bbv12I	GWGCWC	2 cut(s)	193, 969
BbvCI	CCTCAGC	2 cut(s)	84, 527
BbvI	GCAGC	3 cut(s)	544, 838, 841
BccI	CCATC	3 cut(s)	321, 389, 652
BcgI	CGANNNNNNTGC	2 cut(s)	184, 218
BciT130I	CCWGG	1 cut(s)	181
BclI	TGATCA	1 cut(s)	1090
BcoDI	GTCTC	5 cut(s)	181, 461, 486, 830, 929
BfaI	CTAG	1 cut(s)	732
BfmI	CTRYAG	1 cut(s)	162
BisI	GCNGC	3 cut(s)	533, 852, 855
BlsI	GCNGC	3 cut(s)	534, 853, 856
Bme1390I	CCNGG	1 cut(s)	181
Bme18I	GGWCC	1 cut(s)	1113
BmgT120I	GGNCC	4 cut(s)	112, 113, 451, 1113
BmiI	GGNNCC	2 cut(s)	114, 156
BmrFI	CCNGG	1 cut(s)	181
BmrI	ACTGGG	2 cut(s)	458, 732
BmtI	GCTAGC	1 cut(s)	735
BmuI	ACTGGG	2 cut(s)	458, 732
BpiI	GAAGAC	2 cut(s)	383, 996
BplI	GAGNNNNNCTC	2 cut(s)	175, 207
BpmI	CTGGAG	3 cut(s)	202, 256, 485
Bpu10I	CCTNAGC	2 cut(s)	84, 527
Bsa29I	ATCGAT	1 cut(s)	1023
BsaHI	GRCGYC	1 cut(s)	168
BsaI	GGTCTC	2 cut(s)	486, 830
BsaWI	WCCGGW	1 cut(s)	982
BsaXI	ACNNNNNCTCC	7 cut(s)	30, 426, 456, 563, 593, 938, 968
Bsc4I	CCNNNNNNNGG	6 cut(s)	95, 345, 387, 742, 778, 802
Bse1I	ACTGG	4 cut(s)	453, 454, 468, 738
Bse3DI	GCAATG	1 cut(s)	573
BseAI	TCCGGA	1 cut(s)	982
BseBI	CCWGG	1 cut(s)	181
BseCI	ATCGAT	1 cut(s)	1023
BseGI	GGATG	2 cut(s)	10, 56
BseLI	CCNNNNNNNGG	6 cut(s)	95, 345, 387, 742, 778, 802
BseMI	GCAATG	1 cut(s)	573
BseMII	CTCAG	5 cut(s)	98, 462, 518, 801, 861
BseNI	ACTGG	4 cut(s)	453, 454, 468, 738
BseRI	GAGGAG	5 cut(s)	403, 406, 444, 447, 962
BseSI	GKGCMC	1 cut(s)	116
BseXI	GCAGC	3 cut(s)	544, 838, 841
Bsh1236I	CGCG	1 cut(s)	1031
BshFI	GGCC	2 cut(s)	114, 453
BshVI	ATCGAT	1 cut(s)	1023
BsiHKAI	GWGCWC	2 cut(s)	193, 969
BsiSI	CCGG	1 cut(s)	983
BslFI	GGGAC	1 cut(s)	227
BslI	CCNNNNNNNGG	6 cut(s)	95, 345, 387, 742, 778, 802
BsmAI	GTCTC	5 cut(s)	181, 461, 486, 830, 929
BsmFI	GGGAC	1 cut(s)	227
BsnI	GGCC	2 cut(s)	114, 453
Bso31I	GGTCTC	2 cut(s)	486, 830
Bsp120I	GGGCCC	1 cut(s)	112
Bsp1286I	GDGCHC	3 cut(s)	116, 193, 969
Bsp13I	TCCGGA	1 cut(s)	982
Bsp143I	GATC	5 cut(s)	154, 316, 799, 824, 1090
BspACI	CCGC	4 cut(s)	14, 718, 779, 1031
BspANI	GGCC	2 cut(s)	114, 453
BspCNI	CTCAG	5 cut(s)	97, 463, 519, 800, 860
BspDI	ATCGAT	1 cut(s)	1023
BspEI	TCCGGA	1 cut(s)	982
BspFNI	CGCG	1 cut(s)	1031
BspLI	GGNNCC	2 cut(s)	114, 156
BspOI	GCTAGC	1 cut(s)	735
BspPI	GGATC	4 cut(s)	149, 162, 311, 832
BspTNI	GGTCTC	2 cut(s)	486, 830
BsrDI	GCAATG	1 cut(s)	573
BsrI	ACTGG	4 cut(s)	453, 454, 468, 738
BssMI	GATC	5 cut(s)	154, 316, 799, 824, 1090
BssNI	GRCGYC	1 cut(s)	168
Bst2UI	CCWGG	1 cut(s)	181
Bst4CI	ACNGT	1 cut(s)	46
Bst6I	CTCTTC	4 cut(s)	21, 67, 243, 482
BstACI	GRCGYC	1 cut(s)	168
BstC8I	GCNNGC	4 cut(s)	193, 733, 793, 1056
BstDEI	CTNAG	5 cut(s)	84, 471, 527, 787, 847
BstF5I	GGATG	2 cut(s)	10, 56
BstFNI	CGCG	1 cut(s)	1031
BstKTI	GATC	5 cut(s)	157, 319, 802, 827, 1093
BstMAI	GTCTC	5 cut(s)	181, 461, 486, 830, 929
BstMBI	GATC	5 cut(s)	154, 316, 799, 824, 1090
BstMWI	GCNNNNNNNGC	5 cut(s)	192, 532, 623, 921, 1055
BstNI	CCWGG	1 cut(s)	181
BstNSI	RCATGY	1 cut(s)	42
BstSCI	CCNGG	1 cut(s)	179
BstSFI	CTRYAG	1 cut(s)	162
BstSLI	GKGCMC	1 cut(s)	116
BstUI	CGCG	1 cut(s)	1031
BstV1I	GCAGC	3 cut(s)	544, 838, 841
BstV2I	GAAGAC	2 cut(s)	383, 996
BstX2I	RGATCY	1 cut(s)	154
BstXI	CCANNNNNNTGG	1 cut(s)	1062
BstYI	RGATCY	1 cut(s)	154
Bsu15I	ATCGAT	1 cut(s)	1023
BsuRI	GGCC	2 cut(s)	114, 453
BsuTUI	ATCGAT	1 cut(s)	1023
BtgZI	GCGATG	2 cut(s)	975, 1023
BtsCI	GGATG	2 cut(s)	10, 56
BtsI	GCAGTG	1 cut(s)	883
BtsIMutI	CAGTG	3 cut(s)	42, 745, 883
Cac8I	GCNNGC	4 cut(s)	193, 733, 793, 1056
CaiI	CAGNNNCTG	1 cut(s)	854
Cfr13I	GGNCC	4 cut(s)	112, 113, 451, 1113
ClaI	ATCGAT	1 cut(s)	1023
CseI	GACGC	1 cut(s)	176
CviAII	CATG	4 cut(s)	39, 562, 773, 942
DdeI	CTNAG	5 cut(s)	84, 471, 527, 787, 847
DpnI	GATC	5 cut(s)	156, 318, 801, 826, 1092
DpnII	GATC	5 cut(s)	154, 316, 799, 824, 1090
DraIII	CACNNNGTG	1 cut(s)	109
DrdI	GACNNNNNNGTC	1 cut(s)	173
DseDI	GACNNNNNNGTC	1 cut(s)	173
Eam1104I	CTCTTC	4 cut(s)	21, 67, 243, 482
EarI	CTCTTC	4 cut(s)	21, 67, 243, 482
Ecl136II	GAGCTC	2 cut(s)	191, 967
Eco24I	GRGCYC	3 cut(s)	116, 193, 969
Eco31I	GGTCTC	2 cut(s)	486, 830
Eco32I	GATATC	2 cut(s)	883, 1021
Eco47I	GGWCC	1 cut(s)	1113
Eco53kI	GAGCTC	2 cut(s)	191, 967
Eco57I	CTGAAG	1 cut(s)	395
EcoICRI	GAGCTC	2 cut(s)	191, 967
EcoO109I	RGGNCCY	1 cut(s)	113
EcoRII	CCWGG	1 cut(s)	179
EcoRV	GATATC	2 cut(s)	883, 1021
EcoT38I	GRGCYC	3 cut(s)	116, 193, 969
FaeI	CATG	4 cut(s)	42, 565, 776, 945
FaqI	GGGAC	1 cut(s)	227
FatI	CATG	4 cut(s)	38, 561, 772, 941
FauNDI	CATATG	2 cut(s)	298, 399
FbaI	TGATCA	1 cut(s)	1090
Fnu4HI	GCNGC	3 cut(s)	533, 852, 855
FokI	GGATG	2 cut(s)	17, 43
FriOI	GRGCYC	3 cut(s)	116, 193, 969
Fsp4HI	GCNGC	3 cut(s)	533, 852, 855
FspBI	CTAG	1 cut(s)	732
GluI	GCNGC	3 cut(s)	533, 852, 855
GsuI	CTGGAG	3 cut(s)	202, 256, 485
HaeIII	GGCC	2 cut(s)	114, 453
HapII	CCGG	1 cut(s)	983
HgaI	GACGC	1 cut(s)	176
Hin1I	GRCGYC	1 cut(s)	168
Hin1II	CATG	4 cut(s)	42, 565, 776, 945
HindIII	AAGCTT	1 cut(s)	73
HinfI	GANTC	4 cut(s)	215, 748, 869, 1013
HpaII	CCGG	1 cut(s)	983
HphI	GGTGA	3 cut(s)	28, 72, 1079
Hpy188I	TCNGA	3 cut(s)	681, 824, 1018
Hpy188III	TCNNGA	3 cut(s)	320, 385, 983
HpyAV	CCTTC	4 cut(s)	168, 338, 416, 667
HpyCH4III	ACNGT	1 cut(s)	46
HpyCH4IV	ACGT	1 cut(s)	993
HpyCH4V	TGCA	7 cut(s)	42, 415, 583, 754, 857, 1049, 1078
HpyF10VI	GCNNNNNNNGC	5 cut(s)	192, 532, 623, 921, 1055
HpyF3I	CTNAG	5 cut(s)	84, 471, 527, 787, 847
HpySE526I	ACGT	1 cut(s)	993
Hsp92I	GRCGYC	1 cut(s)	168
Hsp92II	CATG	4 cut(s)	42, 565, 776, 945
Kpn2I	TCCGGA	1 cut(s)	982
Ksp22I	TGATCA	1 cut(s)	1090
Kzo9I	GATC	5 cut(s)	154, 316, 799, 824, 1090
LmnI	GCTCC	4 cut(s)	183, 434, 949, 957
Lsp1109I	GCAGC	3 cut(s)	544, 838, 841
MaeI	CTAG	1 cut(s)	732
MaeII	ACGT	1 cut(s)	993
MaeIII	GTNAC	2 cut(s)	34, 402
MalI	GATC	5 cut(s)	156, 318, 801, 826, 1092
MboI	GATC	5 cut(s)	154, 316, 799, 824, 1090
MflI	RGATCY	1 cut(s)	154
MhlI	GDGCHC	3 cut(s)	116, 193, 969
MluCI	AATT	3 cut(s)	332, 544, 705
MlyI	GAGTC	1 cut(s)	209
MmeI	TCCRAC	1 cut(s)	792
MroI	TCCGGA	1 cut(s)	982
MroXI	GAANNNNTTC	1 cut(s)	348
MseI	TTAA	3 cut(s)	291, 506, 930
MslI	CAYNNNNRTG	1 cut(s)	566
MspA1I	CMGCKG	1 cut(s)	851
MspI	CCGG	1 cut(s)	983
MspR9I	CCNGG	1 cut(s)	181
MvaI	CCWGG	1 cut(s)	181
MvnI	CGCG	1 cut(s)	1031
MwoI	GCNNNNNNNGC	5 cut(s)	192, 532, 623, 921, 1055
NdeI	CATATG	2 cut(s)	298, 399
NdeII	GATC	5 cut(s)	154, 316, 799, 824, 1090
NheI	GCTAGC	1 cut(s)	731
NlaIII	CATG	4 cut(s)	42, 565, 776, 945
NlaIV	GGNNCC	2 cut(s)	114, 156
NmuCI	GTSAC	2 cut(s)	34, 402
NspI	RCATGY	1 cut(s)	42
PdmI	GAANNNNTTC	1 cut(s)	348
PfeI	GAWTC	3 cut(s)	748, 869, 1013
PfoI	TCCNGGA	1 cut(s)	179
PkrI	GCNGC	3 cut(s)	534, 853, 856
PleI	GAGTC	1 cut(s)	209
PpsI	GAGTC	1 cut(s)	209
Psp124BI	GAGCTC	2 cut(s)	193, 969
Psp6I	CCWGG	1 cut(s)	179
PspGI	CCWGG	1 cut(s)	179
PspN4I	GGNNCC	2 cut(s)	114, 156
PspOMI	GGGCCC	1 cut(s)	112
PspPI	GGNCC	4 cut(s)	112, 113, 451, 1113
PstNI	CAGNNNCTG	1 cut(s)	854
PsuI	RGATCY	1 cut(s)	154
PvuII	CAGCTG	1 cut(s)	851
RseI	CAYNNNNRTG	1 cut(s)	566
SacI	GAGCTC	2 cut(s)	193, 969
SaqAI	TTAA	3 cut(s)	291, 506, 930
SatI	GCNGC	3 cut(s)	533, 852, 855
Sau3AI	GATC	5 cut(s)	154, 316, 799, 824, 1090
Sau96I	GGNCC	4 cut(s)	112, 113, 451, 1113
SchI	GAGTC	1 cut(s)	209
ScrFI	CCNGG	1 cut(s)	181
SduI	GDGCHC	3 cut(s)	116, 193, 969
SfcI	CTRYAG	1 cut(s)	162
SinI	GGWCC	1 cut(s)	1113
SmiMI	CAYNNNNRTG	1 cut(s)	566
Sse9I	AATT	3 cut(s)	332, 544, 705
SsiI	CCGC	4 cut(s)	14, 718, 779, 1031
SspMI	CTAG	1 cut(s)	732
SstI	GAGCTC	2 cut(s)	193, 969
StyD4I	CCNGG	1 cut(s)	179
TaaI	ACNGT	1 cut(s)	46
TaiI	ACGT	1 cut(s)	996
TaqI	TCGA	2 cut(s)	712, 1023
TaqII	GACCGA	2 cut(s)	339, 510
TasI	AATT	3 cut(s)	332, 544, 705
TfiI	GAWTC	3 cut(s)	748, 869, 1013
Tru1I	TTAA	3 cut(s)	291, 506, 930
Tru9I	TTAA	3 cut(s)	291, 506, 930
TscAI	CASTG	3 cut(s)	49, 745, 883
TseFI	GTSAC	2 cut(s)	34, 402
TseI	GCWGC	3 cut(s)	532, 851, 854
Tsp45I	GTSAC	2 cut(s)	34, 402
TspDTI	ATGAA	4 cut(s)	42, 268, 882, 1026
TspRI	CASTG	3 cut(s)	49, 745, 883
VpaK11BI	GGWCC	1 cut(s)	1113
XapI	RAATTY	2 cut(s)	332, 544
XceI	RCATGY	1 cut(s)	42
XmnI	GAANNNNTTC	1 cut(s)	348
XspI	CTAG	1 cut(s)	732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.