AT2G31432

Plant invertase/pectin methylesterase inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0015949
Physical Location & Seq
Forward (+)
13397480 .. 13398946
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G31432.1

Sequence Viewer

Length: 489 bp
ATGCCAACCAAAGACGTATACAGTCTTTGCAAGGAGTCGTCTGAAGTAGATTTCTGCATGAAAAACATTGGGTCGGACAAACGTATAGTAGCCGCACGCGACTTCTATGACATATTTTTAATCGCGGTATCAAGGACCCAAATTATAGTTGACACTGGACTCTTGGTTATCAGCGGTGAAGATACCCGTAAAAACTATAATGAACCATTTGAGAAGAATTGGGTCGCTGTATGCGAGGAAAAATACAAGATCGCGGTTAATAGTTTTCAGAAGGCTCGAGTAGTTGGAGAGAAAAAGTCAAAGTCATTAACGGACCGTATGGAAATGTCCCAACTCACTGAAGCTGGCTTTGAGGCTGTGCTCGATTGTCAAGACGAATGGACAAAGATTCTAGAACATGAACAAGCGTGTCCTTTTTCTTACTGGTACCATAAAGTTCGAAAACTAGTTAAAATTACTCGTGTTATTGTCAAAAGGCTTAACGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMEI

Protein Analysis

162

Amino Acids

18.79

Weight (kDa)

8.21

Isoelectric Point (pI)

33.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMEI PF04043 6 - 129 6.1e-06 Plant invertase/pectin methylesterase inhibitor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015949)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G31425 AT2G31430 AT2G31432 AT2G31432 AT3G55680
rosa_chinensis RchiOBHm_Chr3g0486661
rosa_laevigata RLG00000023068
rosa_multiflora Rmu_sc0000261.1_g000009
rosa_roxburghii Rroxscaffold_6G00395680
rosa_rugosa Rorug03G0226400
rosa_samantha Rh3AG275900 Rh3BG311100 Rh3CG310500 Rh3DG306900
rosa_wichuraiana Rw3G024580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 426
AccB1I GGYRCC 1 cut(s) 426
AccI GTMKAC 1 cut(s) 18
AccII CGCG 3 cut(s) 99, 125, 254
AciI CCGC 4 cut(s) 93, 125, 174, 254
AcuI CTGAAG 2 cut(s) 63, 360
AfaI GTAC 1 cut(s) 428
AhlI ACTAGT 1 cut(s) 445
AluBI AGCT 1 cut(s) 344
AluI AGCT 1 cut(s) 344
Alw21I GWGCWC 1 cut(s) 363
Ama87I CYCGRG 1 cut(s) 276
Asp718I GGTACC 1 cut(s) 426
AspS9I GGNCC 2 cut(s) 135, 313
AsuHPI GGTGA 1 cut(s) 188
AsuII TTCGAA 1 cut(s) 439
AvaI CYCGRG 1 cut(s) 276
AvaII GGWCC 2 cut(s) 135, 313
BanI GGYRCC 1 cut(s) 426
BauI CACGAG 1 cut(s) 459
Bbv12I GWGCWC 1 cut(s) 363
BcuI ACTAGT 1 cut(s) 445
BfaI CTAG 3 cut(s) 392, 446, 487
BisI GCNGC 1 cut(s) 93
BlsI GCNGC 1 cut(s) 94
Bme18I GGWCC 2 cut(s) 135, 313
BmeT110I CYCGRG 1 cut(s) 276
BmgT120I GGNCC 2 cut(s) 135, 313
BmiI GGNNCC 2 cut(s) 137, 428
Bpu14I TTCGAA 1 cut(s) 439
Bse1I ACTGG 2 cut(s) 160, 428
BseNI ACTGG 2 cut(s) 160, 428
Bsh1236I CGCG 3 cut(s) 99, 125, 254
BshNI GGYRCC 1 cut(s) 426
BsiHKAI GWGCWC 1 cut(s) 363
BsiHKCI CYCGRG 1 cut(s) 276
BslFI GGGAC 1 cut(s) 313
BsmFI GGGAC 1 cut(s) 313
BsoBI CYCGRG 1 cut(s) 276
Bsp119I TTCGAA 1 cut(s) 439
Bsp1286I GDGCHC 1 cut(s) 363
Bsp143I GATC 1 cut(s) 249
BspACI CCGC 4 cut(s) 93, 125, 174, 254
BspFNI CGCG 3 cut(s) 99, 125, 254
BspLI GGNNCC 2 cut(s) 137, 428
BspT104I TTCGAA 1 cut(s) 439
BspT107I GGYRCC 1 cut(s) 426
BsrI ACTGG 2 cut(s) 160, 428
BssMI GATC 1 cut(s) 249
BssNAI GTATAC 1 cut(s) 19
BssSI CACGAG 1 cut(s) 459
Bst1107I GTATAC 1 cut(s) 19
Bst2BI CACGAG 1 cut(s) 459
Bst4CI ACNGT 2 cut(s) 23, 317
BstBI TTCGAA 1 cut(s) 439
BstC8I GCNNGC 2 cut(s) 97, 346
BstFNI CGCG 3 cut(s) 99, 125, 254
BstKTI GATC 1 cut(s) 252
BstMBI GATC 1 cut(s) 249
BstUI CGCG 3 cut(s) 99, 125, 254
BstZ17I GTATAC 1 cut(s) 19
BtsIMutI CAGTG 2 cut(s) 153, 336
Cac8I GCNNGC 2 cut(s) 97, 346
Cfr13I GGNCC 2 cut(s) 135, 313
CpoI CGGWCCG 1 cut(s) 313
Csp6I GTAC 1 cut(s) 427
CspI CGGWCCG 1 cut(s) 313
CviAII CATG 2 cut(s) 58, 398
CviJI RGCY 6 cut(s) 92, 275, 344, 348, 356, 478
CviKI_1 RGCY 6 cut(s) 92, 275, 344, 348, 356, 478
CviQI GTAC 1 cut(s) 427
DpnI GATC 1 cut(s) 251
DpnII GATC 1 cut(s) 249
Eco47I GGWCC 2 cut(s) 135, 313
Eco57I CTGAAG 2 cut(s) 63, 360
Eco88I CYCGRG 1 cut(s) 276
EcoO109I RGGNCCY 1 cut(s) 135
FaeI CATG 2 cut(s) 61, 401
FaqI GGGAC 1 cut(s) 313
FatI CATG 2 cut(s) 57, 397
FblI GTMKAC 1 cut(s) 18
Fnu4HI GCNGC 1 cut(s) 93
Fsp4HI GCNGC 1 cut(s) 93
FspBI CTAG 3 cut(s) 392, 446, 487
GluI GCNGC 1 cut(s) 93
Hin1II CATG 2 cut(s) 61, 401
HincII GTYRAC 1 cut(s) 151
HindII GTYRAC 1 cut(s) 151
HinfI GANTC 3 cut(s) 35, 159, 388
HphI GGTGA 1 cut(s) 188
Hpy166II GTNNAC 2 cut(s) 19, 151
Hpy188I TCNGA 3 cut(s) 43, 76, 270
Hpy188III TCNNGA 2 cut(s) 371, 392
Hpy8I GTNNAC 2 cut(s) 19, 151
HpyAV CCTTC 1 cut(s) 265
HpyCH4III ACNGT 2 cut(s) 23, 317
HpyCH4IV ACGT 2 cut(s) 15, 82
HpyCH4V TGCA 2 cut(s) 30, 57
HpySE526I ACGT 2 cut(s) 15, 82
Hsp92II CATG 2 cut(s) 61, 401
KpnI GGTACC 1 cut(s) 430
Kzo9I GATC 1 cut(s) 249
LpnPI CCDG 3 cut(s) 141, 330, 409
MaeI CTAG 3 cut(s) 392, 446, 487
MaeII ACGT 2 cut(s) 15, 82
MalI GATC 1 cut(s) 251
MboI GATC 1 cut(s) 249
MboII GAAGA 2 cut(s) 191, 226
MhlI GDGCHC 1 cut(s) 363
MluCI AATT 3 cut(s) 141, 217, 453
MlyI GAGTC 2 cut(s) 44, 153
MmeI TCCRAC 2 cut(s) 54, 265
MnlI CCTC 2 cut(s) 229, 346
MseI TTAA 5 cut(s) 119, 258, 308, 450, 480
MspA1I CMGCKG 1 cut(s) 174
MvnI CGCG 3 cut(s) 99, 125, 254
NdeII GATC 1 cut(s) 249
NlaIII CATG 2 cut(s) 61, 401
NlaIV GGNNCC 2 cut(s) 137, 428
NspV TTCGAA 1 cut(s) 439
PaeR7I CTCGAG 1 cut(s) 276
PcsI WCGNNNNNNNCGW 1 cut(s) 231
PfeI GAWTC 1 cut(s) 388
PkrI GCNGC 1 cut(s) 94
PleI GAGTC 2 cut(s) 43, 153
PpsI GAGTC 2 cut(s) 43, 153
PpuMI RGGWCCY 1 cut(s) 135
Psp5II RGGWCCY 1 cut(s) 135
PspN4I GGNNCC 2 cut(s) 137, 428
PspPI GGNCC 2 cut(s) 135, 313
PspPPI RGGWCCY 1 cut(s) 135
PspXI VCTCGAGB 1 cut(s) 276
RsaI GTAC 1 cut(s) 428
RsaNI GTAC 1 cut(s) 427
Rsr2I CGGWCCG 1 cut(s) 313
RsrII CGGWCCG 1 cut(s) 313
SaqAI TTAA 5 cut(s) 119, 258, 308, 450, 480
SatI GCNGC 1 cut(s) 93
Sau3AI GATC 1 cut(s) 249
Sau96I GGNCC 2 cut(s) 135, 313
SchI GAGTC 2 cut(s) 44, 153
SduI GDGCHC 1 cut(s) 363
SetI ASST 3 cut(s) 18, 85, 346
Sfr274I CTCGAG 1 cut(s) 276
SfuI TTCGAA 1 cut(s) 439
SinI GGWCC 2 cut(s) 135, 313
SlaI CTCGAG 1 cut(s) 276
SmlI CTYRAG 1 cut(s) 276
SmoI CTYRAG 1 cut(s) 276
SpeI ACTAGT 1 cut(s) 445
Sse9I AATT 3 cut(s) 141, 217, 453
SsiI CCGC 4 cut(s) 93, 125, 174, 254
SspMI CTAG 3 cut(s) 392, 446, 487
TaaI ACNGT 2 cut(s) 23, 317
TaiI ACGT 2 cut(s) 18, 85
TaqI TCGA 3 cut(s) 277, 363, 439
TasI AATT 3 cut(s) 141, 217, 453
TauI GCSGC 1 cut(s) 95
TfiI GAWTC 1 cut(s) 388
Tru1I TTAA 5 cut(s) 119, 258, 308, 450, 480
Tru9I TTAA 5 cut(s) 119, 258, 308, 450, 480
TscAI CASTG 2 cut(s) 160, 343
TspDTI ATGAA 3 cut(s) 74, 216, 414
TspGWI ACGGA 1 cut(s) 326
TspRI CASTG 2 cut(s) 160, 343
VpaK11BI GGWCC 2 cut(s) 135, 313
XbaI TCTAGA 1 cut(s) 391
XhoI CTCGAG 1 cut(s) 276
XmiI GTMKAC 1 cut(s) 18
XspI CTAG 3 cut(s) 392, 446, 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.