AT2G31865

Poly (ADP-ribose) glycohydrolase (PARG)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
13546544 .. 13549571
3028 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G31865.1

Sequence Viewer

Length: 1569 bp
ATGGAACTGAGGGCAGATCTTAGGTCAATTCTTCAGTATTTGCCTCTTGTGGCTCAGTCTTCATCACTAGTTTGGCCACCTTCTGTCGAAGAAGAGCTCCAAACAATATCTAGAGGACCGAGTGAGTCAATGGTTAACTCGGGAGAGGCTCTTGCCTTGCATATCACGAATATGCGGAAATCTCTCTCCTTGAATGCATCTGATCTCGCCCCTTATGCATTACAAGGGTATGGTCTTTTCTTTGACAAGAAAATTTCCAGAGAAGAGTCGGCAAACTTTTTTGGTGAGGTGGTTCCTGCATTGTGCAGATTACTTCTCCAGTTACCTTCCATGTTAGAAAAACACTATCAGAAGGCAGACCATGTTCTTGATGGAGTTAAGTCCGGGCTTCGTCTATTAGGCCCTCAAGAAGCTGGAATTGTGTTACTTAGCCAGGAGTTGATTGCAGCTCTTCTTGCGTGTTCCTTCTTTTGCTTGTTCCCTGAAGTTGACAGAAGCTTAAAGAATCTTCAAGGAATCAACTTTAGTGGATTGTTTTCGTTTCCGTATATGCGTCACTGCACGAAGCAAGAAAACAAAATAAAGTGCCTTATCCATTACTTTGGAAGAATATGTCGATGGATGCCCACCGGCTTTGTTTCATTTGAGAGGAAAATTCTTCCACTGGAATACCATCCTCACTTTGTTTCTTATCCCAAGGCTGATTCGTGGGCTAATTCTGTCACCCCACTTTGCTCCATTGAGATTCACACCTCGGGAGCTATAGAAGATCAACCTTGTGAAGCTCTTGAAGTAGATTTTGCAGATGAGTATTTTGGAGGCCTTACTCTGAGTTATGATACTCTACAGGAAGAAATAAGGTTCGTGATCAACCCGGAACTTATCGCTGGCATGATCTTTTTGCCTCGTATGGATGCAAATGAAGCAATTGAGATTGTTGGTGTTGAAAGATTTTCAGGTTATACAGGGTATGGGCCTTCGTTCCAATATGCTGGTGATTACACAGACAACAAGGACTTAGACATTTTCAGGAGGCGAAAAACAAGAGTCATAGCTATAGATGCCATGCCTGACCCAGGAATGGGACAGTACAAACTTGATGCCCTCATTCGAGAGGTTAATAAGGCTTTTAGCGGATACATGCATCAATGTAAATATAATATCGATGTTAAGCATGATCCTGAGGCATCATCTTCGCATGTTCCTCTTACATCAGATTCTGCGAGCCAAGTTATAGAAAGCTCTCATAGATGGTGTATCGATCATGAAGAGAAAAAGATTGGTGTAGCTACAGGGAACTGGGGCTGCGGTGTGTTTGGAGGTGATCCAGAACTAAAGATCATGCTTCAGTGGCTTGCCATTTCACAGTCAGGAAGACCCTTCATGTCATACTATACCTTTGGCCTCCAAGCCTTACAAAATCTCAATCAGGTGATCGAAATGGTCGCTTTACAAGAAATGACTGTAGGAGACCTATGGAAAAAACTAGTTGAGTATTCTTCAGAGAGGCTCAGCAGAAGAACATGGCTTGGCTTCTTCTCGTGGCTCATGACCTCACTGTCTACCTAG

Protein Analysis

522

Amino Acids

58.94

Weight (kDa)

5.47

Isoelectric Point (pI)

59.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PARG_cat_N PF20811 86 - 217 1.9e-37 Poly (ADP-ribose) glycohydrolase (PARG), helical domain
PARG_cat_C PF05028 235 - 474 1.1e-75 Poly (ADP-ribose) glycohydrolase (PARG), Macro domain fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1558
AccI GTMKAC 1 cut(s) 1562
AciI CCGC 3 cut(s) 175, 1134, 1308
AclWI GGATC 2 cut(s) 1172, 1319
AcoI YGGCCR 1 cut(s) 74
AcsI RAATTY 2 cut(s) 252, 654
AcuI CTGAAG 4 cut(s) 17, 504, 1331, 1485
AfaI GTAC 1 cut(s) 1091
AfiI CCNNNNNNNGG 3 cut(s) 1076, 1081, 1082
AgsI TTSAA 4 cut(s) 193, 512, 791, 947
AhlI ACTAGT 2 cut(s) 67, 1486
AjnI CCWGG 2 cut(s) 432, 1075
AluBI AGCT 9 cut(s) 97, 413, 449, 498, 761, 785, 1055, 1242, 1289
AluI AGCT 9 cut(s) 97, 413, 449, 498, 761, 785, 1055, 1242, 1289
Alw21I GWGCWC 1 cut(s) 99
Alw26I GTCTC 1 cut(s) 1464
AlwI GGATC 2 cut(s) 1172, 1319
AlwNI CAGNNNCTG 1 cut(s) 1220
Ama87I CYCGRG 2 cut(s) 139, 754
AoxI GGCC 5 cut(s) 74, 400, 820, 974, 1402
ApeKI GCWGC 2 cut(s) 446, 1305
ApoI RAATTY 2 cut(s) 252, 654
AspS9I GGNCC 3 cut(s) 116, 401, 974
AsuC2I CCSGG 2 cut(s) 385, 875
AsuHPI GGTGA 5 cut(s) 296, 715, 1007, 1334, 1444
AvaI CYCGRG 2 cut(s) 139, 754
AvaII GGWCC 1 cut(s) 116
AxyI CCTNAGG 1 cut(s) 1182
BalI TGGCCA 1 cut(s) 76
BanII GRGCYC 1 cut(s) 99
BauI CACGAG 1 cut(s) 1540
BbsI GAAGAC 2 cut(s) 51, 1381
Bbv12I GWGCWC 1 cut(s) 99
BbvI GCAGC 2 cut(s) 458, 1292
BccI CCATC 4 cut(s) 365, 612, 681, 1245
BcgI CGANNNNNNTGC 2 cut(s) 1176, 1210
BciT130I CCWGG 2 cut(s) 434, 1077
BciVI GTATCC 1 cut(s) 1130
BclI TGATCA 1 cut(s) 867
BcnI CCSGG 2 cut(s) 385, 875
BcoDI GTCTC 1 cut(s) 1464
BcuI ACTAGT 2 cut(s) 67, 1486
BfaI CTAG 4 cut(s) 68, 111, 1487, 1567
BfmI CTRYAG 5 cut(s) 762, 845, 1056, 1290, 1464
BfuI GTATCC 1 cut(s) 1130
BglII AGATCT 1 cut(s) 16
BisI GCNGC 2 cut(s) 447, 1306
BlpI GCTNAGC 1 cut(s) 1511
BlsI GCNGC 2 cut(s) 448, 1307
Bme1390I CCNGG 4 cut(s) 385, 434, 875, 1077
Bme18I GGWCC 1 cut(s) 116
BmeT110I CYCGRG 2 cut(s) 139, 754
BmgT120I GGNCC 3 cut(s) 116, 401, 974
BmiI GGNNCC 1 cut(s) 294
BmrFI CCNGG 4 cut(s) 385, 434, 875, 1077
BmrI ACTGGG 1 cut(s) 1309
BmsI GCATC 7 cut(s) 206, 612, 904, 1051, 1090, 1153, 1196
BmuI ACTGGG 1 cut(s) 1309
BpiI GAAGAC 2 cut(s) 51, 1381
BpmI CTGGAG 1 cut(s) 302
Bpu1102I GCTNAGC 1 cut(s) 1511
BpuEI CTTGAG 1 cut(s) 390
BpuMI CCSGG 2 cut(s) 385, 875
Bsa29I ATCGAT 2 cut(s) 1164, 1260
BsaI GGTCTC 1 cut(s) 1464
BsaJI CCNNGG 3 cut(s) 696, 753, 1075
Bsc4I CCNNNNNNNGG 3 cut(s) 1076, 1081, 1082
Bse118I RCCGGY 1 cut(s) 629
Bse1I ACTGG 3 cut(s) 319, 669, 1304
Bse21I CCTNAGG 1 cut(s) 1182
BseBI CCWGG 2 cut(s) 434, 1077
BseCI ATCGAT 2 cut(s) 1164, 1260
BseDI CCNNGG 3 cut(s) 696, 753, 1075
BseGI GGATG 3 cut(s) 627, 673, 919
BseLI CCNNNNNNNGG 3 cut(s) 1076, 1081, 1082
BseMII CTCAG 4 cut(s) 68, 821, 1173, 1525
BseNI ACTGG 3 cut(s) 319, 669, 1304
BseXI GCAGC 2 cut(s) 458, 1292
BsgI GTGCAG 2 cut(s) 325, 544
BshFI GGCC 5 cut(s) 76, 402, 822, 976, 1404
BshVI ATCGAT 2 cut(s) 1164, 1260
BsiHKAI GWGCWC 1 cut(s) 99
BsiHKCI CYCGRG 2 cut(s) 139, 754
BsiSI CCGG 3 cut(s) 384, 630, 875
BslFI GGGAC 1 cut(s) 1098
BslI CCNNNNNNNGG 3 cut(s) 1076, 1081, 1082
BsmAI GTCTC 1 cut(s) 1464
BsmFI GGGAC 1 cut(s) 1098
BsmI GAATGC 1 cut(s) 199
BsnI GGCC 5 cut(s) 76, 402, 822, 976, 1404
Bso31I GGTCTC 1 cut(s) 1464
BsoBI CYCGRG 2 cut(s) 139, 754
Bsp1286I GDGCHC 1 cut(s) 99
Bsp1720I GCTNAGC 1 cut(s) 1511
BspACI CCGC 3 cut(s) 175, 1134, 1308
BspANI GGCC 5 cut(s) 76, 402, 822, 976, 1404
BspCNI CTCAG 4 cut(s) 67, 822, 1174, 1524
BspDI ATCGAT 2 cut(s) 1164, 1260
BspHI TCATGA 2 cut(s) 1264, 1548
BspLI GGNNCC 1 cut(s) 294
BspPI GGATC 2 cut(s) 1172, 1319
BspQI GCTCTTC 2 cut(s) 87, 456
BspTNI GGTCTC 1 cut(s) 1464
BsrFI RCCGGY 1 cut(s) 629
BsrI ACTGG 3 cut(s) 319, 669, 1304
BssAI RCCGGY 1 cut(s) 629
BssECI CCNNGG 3 cut(s) 696, 753, 1075
BssSI CACGAG 1 cut(s) 1540
BssT1I CCWWGG 1 cut(s) 696
Bst2BI CACGAG 1 cut(s) 1540
Bst2UI CCWGG 2 cut(s) 434, 1077
Bst4CI ACNGT 4 cut(s) 1089, 1368, 1465, 1560
Bst6I CTCTTC 4 cut(s) 87, 258, 456, 1263
BstC8I GCNNGC 3 cut(s) 889, 1225, 1356
BstDEI CTNAG 8 cut(s) 8, 20, 54, 428, 830, 1018, 1182, 1511
BstENI CCTNNNNNAGG 1 cut(s) 1074
BstF5I GGATG 3 cut(s) 627, 673, 919
BstMAI GTCTC 1 cut(s) 1464
BstMWI GCNNNNNNNGC 5 cut(s) 215, 455, 923, 1061, 1351
BstNI CCWGG 2 cut(s) 434, 1077
BstNSI RCATGY 2 cut(s) 1144, 1202
BstSCI CCNGG 4 cut(s) 383, 432, 873, 1075
BstSFI CTRYAG 5 cut(s) 762, 845, 1056, 1290, 1464
BstV1I GCAGC 2 cut(s) 458, 1292
BstV2I GAAGAC 2 cut(s) 51, 1381
BstX2I RGATCY 1 cut(s) 16
BstXI CCANNNNNNTGG 2 cut(s) 602, 992
BstYI RGATCY 1 cut(s) 16
Bsu15I ATCGAT 2 cut(s) 1164, 1260
Bsu36I CCTNAGG 1 cut(s) 1182
BsuI GTATCC 1 cut(s) 1130
BsuRI GGCC 5 cut(s) 76, 402, 822, 976, 1404
BsuTUI ATCGAT 2 cut(s) 1164, 1260
BtsCI GGATG 3 cut(s) 627, 673, 919
BtsI GCAGTG 1 cut(s) 556
BtsIMutI CAGTG 4 cut(s) 556, 662, 1355, 1556
Cac8I GCNNGC 3 cut(s) 889, 1225, 1356
CaiI CAGNNNCTG 1 cut(s) 1220
CciI TCATGA 2 cut(s) 1264, 1548
Cfr10I RCCGGY 1 cut(s) 629
Cfr13I GGNCC 3 cut(s) 116, 401, 974
ClaI ATCGAT 2 cut(s) 1164, 1260
CseI GACGC 1 cut(s) 542
Csp6I GTAC 1 cut(s) 1090
CspCI CAANNNNNGTGG 4 cut(s) 508, 543, 616, 651
CviQI GTAC 1 cut(s) 1090
DdeI CTNAG 8 cut(s) 8, 20, 54, 428, 830, 1018, 1182, 1511
DrdI GACNNNNNNGTC 1 cut(s) 1558
DseDI GACNNNNNNGTC 1 cut(s) 1558
EaeI YGGCCR 1 cut(s) 74
Eam1104I CTCTTC 4 cut(s) 87, 258, 456, 1263
EarI CTCTTC 4 cut(s) 87, 258, 456, 1263
Ecl136II GAGCTC 1 cut(s) 97
Eco130I CCWWGG 1 cut(s) 696
Eco147I AGGCCT 1 cut(s) 822
Eco24I GRGCYC 1 cut(s) 99
Eco31I GGTCTC 1 cut(s) 1464
Eco47I GGWCC 1 cut(s) 116
Eco53kI GAGCTC 1 cut(s) 97
Eco57I CTGAAG 4 cut(s) 17, 504, 1331, 1485
Eco81I CCTNAGG 1 cut(s) 1182
Eco88I CYCGRG 2 cut(s) 139, 754
EcoICRI GAGCTC 1 cut(s) 97
EcoNI CCTNNNNNAGG 1 cut(s) 1074
EcoO109I RGGNCCY 1 cut(s) 401
EcoRII CCWGG 2 cut(s) 432, 1075
EcoT14I CCWWGG 1 cut(s) 696
EcoT22I ATGCAT 3 cut(s) 199, 220, 1146
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 1 cut(s) 696
FaqI GGGAC 1 cut(s) 1098
FbaI TGATCA 1 cut(s) 867
FblI GTMKAC 1 cut(s) 1562
Fnu4HI GCNGC 2 cut(s) 447, 1306
FokI GGATG 3 cut(s) 634, 660, 926
FriOI GRGCYC 1 cut(s) 99
Fsp4HI GCNGC 2 cut(s) 447, 1306
FspBI CTAG 4 cut(s) 68, 111, 1487, 1567
GluI GCNGC 2 cut(s) 447, 1306
GsuI CTGGAG 1 cut(s) 302
HaeIII GGCC 5 cut(s) 76, 402, 822, 976, 1404
HapII CCGG 3 cut(s) 384, 630, 875
HgaI GACGC 1 cut(s) 542
HincII GTYRAC 2 cut(s) 136, 490
HindII GTYRAC 2 cut(s) 136, 490
HindIII AAGCTT 1 cut(s) 496
HinfI GANTC 8 cut(s) 125, 266, 505, 516, 704, 745, 1047, 1217
HpaI GTTAAC 1 cut(s) 136
HpaII CCGG 3 cut(s) 384, 630, 875
HphI GGTGA 5 cut(s) 296, 715, 1007, 1334, 1444
Hpy166II GTNNAC 3 cut(s) 136, 490, 1563
Hpy188I TCNGA 5 cut(s) 202, 351, 831, 1216, 1504
Hpy8I GTNNAC 3 cut(s) 136, 490, 1563
HpyAV CCTTC 6 cut(s) 90, 336, 346, 475, 987, 1390
HpyCH4III ACNGT 4 cut(s) 1089, 1368, 1465, 1560
HpyF10VI GCNNNNNNNGC 5 cut(s) 215, 455, 923, 1061, 1351
HpyF3I CTNAG 8 cut(s) 8, 20, 54, 428, 830, 1018, 1182, 1511
Ksp22I TGATCA 1 cut(s) 867
KspAI GTTAAC 1 cut(s) 136
LguI GCTCTTC 2 cut(s) 87, 456
LmnI GCTCC 3 cut(s) 102, 740, 758
Lsp1109I GCAGC 2 cut(s) 458, 1292
LweI GCATC 7 cut(s) 206, 612, 904, 1051, 1090, 1153, 1196
MaeI CTAG 4 cut(s) 68, 111, 1487, 1567
MaeIII GTNAC 4 cut(s) 321, 423, 554, 721
MfeI CAATTG 1 cut(s) 927
MflI RGATCY 1 cut(s) 16
MhlI GDGCHC 1 cut(s) 99
MlsI TGGCCA 1 cut(s) 76
MluCI AATT 6 cut(s) 27, 252, 417, 654, 715, 927
MluNI TGGCCA 1 cut(s) 76
MlyI GAGTC 3 cut(s) 134, 275, 1056
Mox20I TGGCCA 1 cut(s) 76
Mph1103I ATGCAT 3 cut(s) 199, 220, 1146
MscI TGGCCA 1 cut(s) 76
MseI TTAA 5 cut(s) 135, 378, 500, 1119, 1170
MslI CAYNNNNRTG 1 cut(s) 170
Msp20I TGGCCA 1 cut(s) 76
MspI CCGG 3 cut(s) 384, 630, 875
MspR9I CCNGG 4 cut(s) 385, 434, 875, 1077
MunI CAATTG 1 cut(s) 927
Mva1269I GAATGC 1 cut(s) 199
MvaI CCWGG 2 cut(s) 434, 1077
MwoI GCNNNNNNNGC 5 cut(s) 215, 455, 923, 1061, 1351
NciI CCSGG 2 cut(s) 385, 875
NlaIV GGNNCC 1 cut(s) 294
NmuCI GTSAC 2 cut(s) 554, 721
NsiI ATGCAT 3 cut(s) 199, 220, 1146
NspI RCATGY 2 cut(s) 1144, 1202
PagI TCATGA 2 cut(s) 1264, 1548
PceI AGGCCT 1 cut(s) 822
PciSI GCTCTTC 2 cut(s) 87, 456
PctI GAATGC 1 cut(s) 199
PfeI GAWTC 5 cut(s) 505, 516, 704, 745, 1217
PkrI GCNGC 2 cut(s) 448, 1307
PleI GAGTC 3 cut(s) 133, 274, 1055
PpsI GAGTC 3 cut(s) 133, 274, 1055
Psp124BI GAGCTC 1 cut(s) 99
Psp6I CCWGG 2 cut(s) 432, 1075
PspGI CCWGG 2 cut(s) 432, 1075
PspN4I GGNNCC 1 cut(s) 294
PspPI GGNCC 3 cut(s) 116, 401, 974
PstNI CAGNNNCTG 1 cut(s) 1220
PsuI RGATCY 1 cut(s) 16
RsaI GTAC 1 cut(s) 1091
RsaNI GTAC 1 cut(s) 1090
RseI CAYNNNNRTG 1 cut(s) 170
SacI GAGCTC 1 cut(s) 99
SapI GCTCTTC 2 cut(s) 87, 456
SaqAI TTAA 5 cut(s) 135, 378, 500, 1119, 1170
SatI GCNGC 2 cut(s) 447, 1306
Sau96I GGNCC 3 cut(s) 116, 401, 974
SchI GAGTC 3 cut(s) 134, 275, 1056
ScrFI CCNGG 4 cut(s) 385, 434, 875, 1077
SduI GDGCHC 1 cut(s) 99
SfaNI GCATC 7 cut(s) 206, 612, 904, 1051, 1090, 1153, 1196
SfcI CTRYAG 5 cut(s) 762, 845, 1056, 1290, 1464
SinI GGWCC 1 cut(s) 116
SmiMI CAYNNNNRTG 1 cut(s) 170
SmlI CTYRAG 1 cut(s) 405
SmoI CTYRAG 1 cut(s) 405
SpeI ACTAGT 2 cut(s) 67, 1486
Sse9I AATT 6 cut(s) 27, 252, 417, 654, 715, 927
SseBI AGGCCT 1 cut(s) 822
SsiI CCGC 3 cut(s) 175, 1134, 1308
SspMI CTAG 4 cut(s) 68, 111, 1487, 1567
SstI GAGCTC 1 cut(s) 99
StuI AGGCCT 1 cut(s) 822
StyD4I CCNGG 4 cut(s) 383, 432, 873, 1075
StyI CCWWGG 1 cut(s) 696
TaaI ACNGT 4 cut(s) 1089, 1368, 1465, 1560
TaqI TCGA 6 cut(s) 87, 616, 1111, 1164, 1260, 1437
TaqII GACCGA 1 cut(s) 133
TasI AATT 6 cut(s) 27, 252, 417, 654, 715, 927
TatI WGTACW 1 cut(s) 1089
TfiI GAWTC 5 cut(s) 505, 516, 704, 745, 1217
Tru1I TTAA 5 cut(s) 135, 378, 500, 1119, 1170
Tru9I TTAA 5 cut(s) 135, 378, 500, 1119, 1170
TscAI CASTG 4 cut(s) 563, 669, 1355, 1563
TseFI GTSAC 2 cut(s) 554, 721
TseI GCWGC 2 cut(s) 446, 1305
Tsp45I GTSAC 2 cut(s) 554, 721
TspDTI ATGAA 5 cut(s) 51, 630, 936, 1281, 1372
TspGWI ACGGA 1 cut(s) 534
TspRI CASTG 4 cut(s) 563, 669, 1355, 1563
VpaK11BI GGWCC 1 cut(s) 116
XagI CCTNNNNNAGG 1 cut(s) 1074
XapI RAATTY 2 cut(s) 252, 654
XbaI TCTAGA 1 cut(s) 110
XceI RCATGY 2 cut(s) 1144, 1202
XcmI CCANNNNNNNNNTGG 1 cut(s) 368
XmiI GTMKAC 1 cut(s) 1562
XspI CTAG 4 cut(s) 68, 111, 1487, 1567
Zsp2I ATGCAT 3 cut(s) 199, 220, 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.