Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0004038

Physical Location & Seq

Genomic Coordinates Forward (+)

10542094 .. 10551688

Gene Structure 9595 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1142600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGAGACAATGGAAGGGAGGGAAGACTTGAAGTCGATACTAGAGTATCTGCCGGTGGTGGTACGGTCTTGCAGTCTGTTCTGGCCGCCGCAAGTGGTGGATGCTCTAAAGGTGTTGGCGGGAGGTCCTGATCAGAGTGGGGTGCATTCTGGGGAGCTGCTATTCATAGCCATTTCGGACCTCCGGCACTCTCTTTTGCTCTCCTCTCACCCCTTCGCTCCTTCCGCCCCATACGGCTACGCCCTCTTCTTCAATGAGCTCATGTCCAGGGGGGAAGCGAGGAAATGGTTTGGAGAGGTTGTCCCGGCATTGGCGAATTTGCTTTTGCGCTTGCCCGCTCTGCTAGAATACCACTATCAAAACGCAGGTGACCTTATCCATGGAGTCAAAACTGGCCTTCGTCTACTGGATTCACAAGAAGCAGGAATCGTGTTGCTCAGCCAGGAACTAATTAGTGCTCTTCTCGGGTGCTCGTTATTTTGTTTGTTCCCCACCAATAAACGAGGTGCCAGACATCTCCCAACCATCAACTGCGATCATTTGTTTGCGGCGTTATATGACAGTTATAGTGAACAACAGGAGAATAAGATAAGGTGCATTATACACTACTTTGAAAGGATAAGTTGCCATATGCCTGAGGGTTTTGTCTCATTTGAGCGGAAAGTTCTTCCTCTGAAACATGATCCTTTAAGCATTTCTTACCCCAAGGCTAGTTTTTGGAGCAAGTCAGACATTCCTCTCTGCCGCTTTGAGGTTAACAGCTCAGACTCAGGCTTGATAGAAGATCAGTCAAGTGGGGCTCTTGAAGTTGACTTTGCAAACAAAAATATAGGAGGTGGTGCTCTTCGCAAGGGCTGTGTACAGGAAGAGATCCGTTTCATGATCAATCCTGAATTAATTGCTAGCATGCTGTTCATGCCTTCCATGGAAGATAATGAGGCTATAGAAATTATTGGTGCAGAAAGGTTTTCCGATTATACAGGGTATGCTTCTTCTTTTCGTTTTGCTGGTGACTATGTGGACACAAGGGATGTAGACTCTCTCAGAAGACGTAAAACCAGAATTATTGCAATAGATGCATTATGCAGCCCAGGGATGAGACAATATAAACAAGACTTCCTCCTCCGGGAAACTAATAAGGCATTCTGTGGATTTTTTCAACAATCGAAAGATCAGCACAACAAGAGATTGTTTCGAGAGGATGGATGTTCTGGAGTTCAGCTTCATCCAGATGTTAAAGACTCCAGTGACATTTGTAGTGATAATCGTTTGTTGCAGGAAACTAGCGAAAATTCTGATGAGGTGTTTGGAGGACAATCTGTACACCAACAGATCAGAGATTCTGAGATGTCTCTGGATAATGAGGATGATGAAGTTGGGATTGCAACTGGGAATTGGGGATGTGGTGCTTTTGGAGGAGATCCTGAAGTGAAGGCCGTAGTTCAGTGGCTAGCTGCCTCTCAGGCAGAAAGACCATTCATTTTGTACTACACGCTTGGCTCGAAGGCATTGCGAAACATAGAGCAGGTAACTCGATGGATACGTTCGCATGAATGGACAGTTGGAGATCTGTGGAATTTGTTGGTGGAGTACTCAACGCAGAGATTGAAGGGAGAGACGGATGATGGATTCTTTACTTGGCTCCTTCCATCTCTATTTGCCCCTCATCATGATACCGATATGTTGGATTTGCCTATTTCGCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004553 GO:0004649 GO:0006282 GO:0006950 GO:0006952 GO:0006970 GO:0006974 GO:0006979 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009987 GO:0010035 GO:0010118 GO:0016787 GO:0016798 GO:0019219 GO:0019222 GO:0031323 GO:0033554 GO:0042221 GO:0043207 GO:0048583 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051052 GO:0051171 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0080135 GO:0090332 GO:0098542 GO:1901700 GO:2001020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PARG_cat

Protein Analysis

569

Amino Acids

63.92

Weight (kDa)

5.09

Isoelectric Point (pI)

54.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PARG_cat_N	PF20811	88 - 220	6.8e-35	Poly (ADP-ribose) glycohydrolase (PARG), helical domain
PARG_cat_C	PF05028	239 - 505	4.5e-83	Poly (ADP-ribose) glycohydrolase (PARG), Macro domain fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004038)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31865 AT2G31865 AT2G31865 AT2G31870 AT2G31870
fragaria_vesca	FvH4_1g00120 FvH4_1g00120 FvH4_1g00120 FvH4_1g00120 FvH4_1g00120 FvH4_1g00120 FvH4_6g52520 FvH4_6g52520 FvH4_6g52520 FvH4_6g52520
malus_domestica	MD15G1142600.v1.1
prunus_persica	Prupe.7G270600_v2.0.a1 Prupe.7G270600_v2.0.a1 Prupe.7G270600_v2.0.a1 Prupe.7G270600_v2.0.a1 Prupe.7G270600_v2.0.a1
pyrus_communis	pycom15g12860
rosa_chinensis	RchiOBHm_Chr2g0084431
rosa_laevigata	RLG00000015616
rosa_multiflora	Rmu_sc0009404.1_g000007 Rmu_sc0025868.1_g000002
rosa_roxburghii	Rroxscaffold_2G00156100
rosa_rugosa	Rorug01G0453500
rosa_samantha	Rh2AG001800 Rh2BG001500 Rh2CG001600 Rh2DG001900
rosa_wichuraiana	Rw2G000150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	356
Acc36I	ACCTGC	2 cut(s)	356, 1516
AccB1I	GGYRCC	1 cut(s)	506
AccBSI	CCGCTC	2 cut(s)	338, 658
AccI	GTMKAC	2 cut(s)	403, 1035
AciI	CCGC	8 cut(s)	86, 89, 119, 225, 336, 548, 658, 745
AclWI	GGATC	3 cut(s)	677, 865, 1415
AcoI	YGGCCR	1 cut(s)	83
AcsI	RAATTY	3 cut(s)	316, 1291, 1576
AcuI	CTGAAG	1 cut(s)	1446
AfaI	GTAC	5 cut(s)	63, 861, 1323, 1487, 1592
AfiI	CCNNNNNNNGG	3 cut(s)	310, 751, 1126
AgsI	TTSAA	6 cut(s)	31, 253, 614, 806, 1160, 1609
AhdI	GACNNNNNGTC	1 cut(s)	31
AjnI	CCWGG	3 cut(s)	266, 441, 1090
AjuI	GAANNNNNNNTTGG	2 cut(s)	1545, 1577
AluBI	AGCT	5 cut(s)	157, 259, 762, 1222, 1454
AluI	AGCT	5 cut(s)	157, 259, 762, 1222, 1454
Alw21I	GWGCWC	4 cut(s)	261, 460, 473, 844
Alw26I	GTCTC	4 cut(s)	652, 1093, 1356, 1610
AlwI	GGATC	3 cut(s)	677, 865, 1415
Ama87I	CYCGRG	1 cut(s)	464
AoxI	GGCC	3 cut(s)	83, 394, 1434
ApeKI	GCWGC	3 cut(s)	157, 1086, 1454
ApoI	RAATTY	3 cut(s)	316, 1291, 1576
AseI	ATTAAT	1 cut(s)	896
AspLEI	GCGC	1 cut(s)	330
AspS9I	GGNCC	2 cut(s)	125, 178
AsuC2I	CCSGG	2 cut(s)	305, 1127
AsuHPI	GGTGA	3 cut(s)	200, 380, 1022
AsuNHI	GCTAGC	2 cut(s)	902, 1450
AvaI	CYCGRG	1 cut(s)	464
AvaII	GGWCC	2 cut(s)	125, 178
AxyI	CCTNAGG	1 cut(s)	636
BaeI	ACNNNNGTAYC	4 cut(s)	29, 29, 62, 62
BanI	GGYRCC	1 cut(s)	506
BanII	GRGCYC	2 cut(s)	261, 802
BbsI	GAAGAC	2 cut(s)	30, 1054
Bbv12I	GWGCWC	4 cut(s)	261, 460, 473, 844
BbvI	GCAGC	3 cut(s)	144, 1098, 1441
BccI	CCATC	5 cut(s)	533, 1196, 1530, 1619, 1657
BceAI	ACGGC	2 cut(s)	250, 1421
BcgI	CGANNNNNNTGC	4 cut(s)	1492, 1514, 1526, 1548
BciT130I	CCWGG	3 cut(s)	268, 443, 1092
BciVI	GTATCC	1 cut(s)	1533
BclI	TGATCA	2 cut(s)	130, 882
BcnI	CCSGG	2 cut(s)	305, 1127
BcoDI	GTCTC	4 cut(s)	652, 1093, 1356, 1610
BfaI	CTAG	6 cut(s)	41, 344, 711, 903, 1284, 1451
BfmI	CTRYAG	1 cut(s)	942
BfuAI	ACCTGC	2 cut(s)	356, 1516
BfuI	GTATCC	1 cut(s)	1533
BglI	GCCNNNNNGGC	1 cut(s)	1463
BglII	AGATCT	1 cut(s)	1567
BisI	GCNGC	7 cut(s)	86, 89, 158, 549, 745, 1087, 1455
BlpI	GCTNAGC	1 cut(s)	437
BlsI	GCNGC	7 cut(s)	87, 90, 159, 550, 746, 1088, 1456
BmcAI	AGTACT	1 cut(s)	1592
Bme1390I	CCNGG	5 cut(s)	268, 305, 443, 1092, 1127
Bme18I	GGWCC	2 cut(s)	125, 178
BmeRI	GACNNNNNGTC	1 cut(s)	31
BmeT110I	CYCGRG	1 cut(s)	464
BmgT120I	GGNCC	2 cut(s)	125, 178
BmiI	GGNNCC	2 cut(s)	508, 1643
BmrFI	CCNGG	5 cut(s)	268, 305, 443, 1092, 1127
BmrI	ACTGGG	1 cut(s)	1398
BmsI	GCATC	2 cut(s)	91, 1066
BmtI	GCTAGC	2 cut(s)	906, 1454
BmuI	ACTGGG	1 cut(s)	1398
BpiI	GAAGAC	2 cut(s)	30, 1054
BpmI	CTGGAG	2 cut(s)	1228, 1233
Bpu1102I	GCTNAGC	1 cut(s)	437
BpuMI	CCSGG	2 cut(s)	305, 1127
BsaJI	CCNNGG	6 cut(s)	267, 379, 705, 924, 1090, 1091
BsaXI	ACNNNNNCTCC	2 cut(s)	285, 315
Bsc4I	CCNNNNNNNGG	3 cut(s)	310, 751, 1126
Bse118I	RCCGGY	1 cut(s)	52
Bse1I	ACTGG	4 cut(s)	397, 411, 1245, 1393
Bse21I	CCTNAGG	1 cut(s)	636
Bse3DI	GCAATG	1 cut(s)	1508
BseBI	CCWGG	3 cut(s)	268, 443, 1092
BseDI	CCNNGG	6 cut(s)	267, 379, 705, 924, 1090, 1091
BseGI	GGATG	9 cut(s)	106, 1036, 1101, 1207, 1211, 1225, 1372, 1406, 1627
BseLI	CCNNNNNNNGG	3 cut(s)	310, 751, 1126
BseMI	GCAATG	1 cut(s)	1508
BseMII	CTCAG	7 cut(s)	451, 627, 777, 783, 1057, 1335, 1475
BseNI	ACTGG	4 cut(s)	397, 411, 1245, 1393
BseRI	GAGGAG	3 cut(s)	193, 1112, 1431
BseXI	GCAGC	3 cut(s)	144, 1098, 1441
BsgI	GTGCAG	1 cut(s)	978
BshFI	GGCC	3 cut(s)	85, 396, 1436
BshNI	GGYRCC	1 cut(s)	506
BsiHKAI	GWGCWC	4 cut(s)	261, 460, 473, 844
BsiHKCI	CYCGRG	1 cut(s)	464
BsiSI	CCGG	4 cut(s)	53, 184, 305, 1126
BslFI	GGGAC	1 cut(s)	287
BslI	CCNNNNNNNGG	3 cut(s)	310, 751, 1126
BsmAI	GTCTC	4 cut(s)	652, 1093, 1356, 1610
BsmBI	CGTCTC	1 cut(s)	1610
BsmFI	GGGAC	1 cut(s)	287
BsmI	GAATGC	2 cut(s)	145, 1142
BsnI	GGCC	3 cut(s)	85, 396, 1436
BsoBI	CYCGRG	1 cut(s)	464
Bsp1286I	GDGCHC	5 cut(s)	261, 460, 473, 802, 844
Bsp1407I	TGTACA	2 cut(s)	859, 1321
Bsp1720I	GCTNAGC	1 cut(s)	437
Bsp19I	CCATGG	2 cut(s)	379, 924
BspACI	CCGC	8 cut(s)	86, 89, 119, 225, 336, 548, 658, 745
BspANI	GGCC	3 cut(s)	85, 396, 1436
BspCNI	CTCAG	7 cut(s)	450, 628, 776, 782, 1056, 1336, 1474
BspHI	TCATGA	2 cut(s)	879, 1669
BspLI	GGNNCC	2 cut(s)	508, 1643
BspMI	ACCTGC	2 cut(s)	356, 1516
BspOI	GCTAGC	2 cut(s)	906, 1454
BspPI	GGATC	3 cut(s)	677, 865, 1415
BspQI	GCTCTTC	2 cut(s)	465, 849
BspT107I	GGYRCC	1 cut(s)	506
BsrBI	CCGCTC	2 cut(s)	338, 658
BsrDI	GCAATG	1 cut(s)	1508
BsrFI	RCCGGY	1 cut(s)	52
BsrGI	TGTACA	2 cut(s)	859, 1321
BsrI	ACTGG	4 cut(s)	397, 411, 1245, 1393
BssAI	RCCGGY	1 cut(s)	52
BssECI	CCNNGG	6 cut(s)	267, 379, 705, 924, 1090, 1091
BssT1I	CCWWGG	3 cut(s)	379, 705, 924
Bst2UI	CCWGG	3 cut(s)	268, 443, 1092
Bst4CI	ACNGT	3 cut(s)	66, 563, 1561
Bst6I	CTCTTC	4 cut(s)	251, 465, 849, 861
BstAPI	GCANNNNNTGC	1 cut(s)	1076
BstAUI	TGTACA	2 cut(s)	859, 1321
BstC8I	GCNNGC	5 cut(s)	332, 336, 904, 908, 1452
BstDEI	CTNAG	7 cut(s)	437, 636, 763, 769, 1043, 1344, 1461
BstDSI	CCRYGG	2 cut(s)	379, 924
BstEII	GGTNACC	1 cut(s)	368
BstF5I	GGATG	9 cut(s)	106, 1036, 1101, 1207, 1211, 1225, 1372, 1406, 1627
BstHHI	GCGC	1 cut(s)	330
BstMAI	GTCTC	4 cut(s)	652, 1093, 1356, 1610
BstMWI	GCNNNNNNNGC	6 cut(s)	224, 340, 916, 1076, 1463, 1699
BstNI	CCWGG	3 cut(s)	268, 443, 1092
BstNSI	RCATGY	1 cut(s)	910
BstPI	GGTNACC	1 cut(s)	368
BstSCI	CCNGG	5 cut(s)	266, 303, 441, 1090, 1125
BstSFI	CTRYAG	1 cut(s)	942
BstV1I	GCAGC	3 cut(s)	144, 1098, 1441
BstV2I	GAAGAC	2 cut(s)	30, 1054
BstX2I	RGATCY	3 cut(s)	870, 1420, 1567
BstYI	RGATCY	3 cut(s)	870, 1420, 1567
Bsu36I	CCTNAGG	1 cut(s)	636
BsuI	GTATCC	1 cut(s)	1533
BsuRI	GGCC	3 cut(s)	85, 396, 1436
BtgI	CCRYGG	2 cut(s)	379, 924
BtsCI	GGATG	9 cut(s)	106, 1036, 1101, 1207, 1211, 1225, 1372, 1406, 1627
BtsIMutI	CAGTG	2 cut(s)	1252, 1451
BveI	ACCTGC	2 cut(s)	356, 1516
Cac8I	GCNNGC	5 cut(s)	332, 336, 904, 908, 1452
CciI	TCATGA	2 cut(s)	879, 1669
CfoI	GCGC	1 cut(s)	330
Cfr10I	RCCGGY	1 cut(s)	52
Cfr13I	GGNCC	2 cut(s)	125, 178
Csp6I	GTAC	5 cut(s)	62, 860, 1322, 1486, 1591
CviAII	CATG	9 cut(s)	262, 380, 680, 880, 907, 916, 925, 1550, 1670
CviQI	GTAC	5 cut(s)	62, 860, 1322, 1486, 1591
DdeI	CTNAG	7 cut(s)	437, 636, 763, 769, 1043, 1344, 1461
DriI	GACNNNNNGTC	1 cut(s)	31
EaeI	YGGCCR	1 cut(s)	83
Eam1104I	CTCTTC	4 cut(s)	251, 465, 849, 861
Eam1105I	GACNNNNNGTC	1 cut(s)	31
EarI	CTCTTC	4 cut(s)	251, 465, 849, 861
EciI	GGCGGA	1 cut(s)	214
Ecl136II	GAGCTC	1 cut(s)	259
Eco130I	CCWWGG	3 cut(s)	379, 705, 924
Eco24I	GRGCYC	2 cut(s)	261, 802
Eco47I	GGWCC	2 cut(s)	125, 178
Eco53kI	GAGCTC	1 cut(s)	259
Eco57I	CTGAAG	1 cut(s)	1446
Eco81I	CCTNAGG	1 cut(s)	636
Eco88I	CYCGRG	1 cut(s)	464
Eco91I	GGTNACC	1 cut(s)	368
EcoICRI	GAGCTC	1 cut(s)	259
EcoO109I	RGGNCCY	1 cut(s)	125
EcoO65I	GGTNACC	1 cut(s)	368
EcoRII	CCWGG	3 cut(s)	266, 441, 1090
EcoT14I	CCWWGG	3 cut(s)	379, 705, 924
EcoT22I	ATGCAT	1 cut(s)	1081
EcoT38I	GRGCYC	2 cut(s)	261, 802
ErhI	CCWWGG	3 cut(s)	379, 705, 924
Esp3I	CGTCTC	1 cut(s)	1610
FaeI	CATG	9 cut(s)	265, 383, 683, 883, 910, 919, 928, 1553, 1673
FalI	AAGNNNNNCTT	2 cut(s)	682, 714
FaqI	GGGAC	1 cut(s)	287
FatI	CATG	9 cut(s)	261, 379, 679, 879, 906, 915, 924, 1549, 1669
FauI	CCCGC	2 cut(s)	112, 343
FauNDI	CATATG	1 cut(s)	630
FbaI	TGATCA	2 cut(s)	130, 882
FblI	GTMKAC	2 cut(s)	403, 1035
Fnu4HI	GCNGC	7 cut(s)	86, 89, 158, 549, 745, 1087, 1455
FokI	GGATG	9 cut(s)	113, 1043, 1108, 1212, 1214, 1218, 1379, 1413, 1634
FriOI	GRGCYC	2 cut(s)	261, 802
Fsp4HI	GCNGC	7 cut(s)	86, 89, 158, 549, 745, 1087, 1455
FspBI	CTAG	6 cut(s)	41, 344, 711, 903, 1284, 1451
GlaI	GCGC	1 cut(s)	329
GluI	GCNGC	7 cut(s)	86, 89, 158, 549, 745, 1087, 1455
GsuI	CTGGAG	2 cut(s)	1228, 1233
HaeIII	GGCC	3 cut(s)	85, 396, 1436
HapII	CCGG	4 cut(s)	53, 184, 305, 1126
HhaI	GCGC	1 cut(s)	330
Hin1II	CATG	9 cut(s)	265, 383, 683, 883, 910, 919, 928, 1553, 1673
Hin6I	GCGC	1 cut(s)	328
HinP1I	GCGC	1 cut(s)	328
HincII	GTYRAC	2 cut(s)	757, 811
HindII	GTYRAC	2 cut(s)	757, 811
HinfI	GANTC	8 cut(s)	384, 410, 426, 767, 1037, 1241, 1340, 1629
HpaI	GTTAAC	1 cut(s)	757
HpaII	CCGG	4 cut(s)	53, 184, 305, 1126
HphI	GGTGA	3 cut(s)	200, 380, 1022
Hpy166II	GTNNAC	8 cut(s)	404, 572, 757, 811, 860, 1021, 1036, 1324
Hpy8I	GTNNAC	8 cut(s)	404, 572, 757, 811, 860, 1021, 1036, 1324
HpyAV	CCTTC	9 cut(s)	8, 223, 231, 407, 930, 1426, 1498, 1603, 1655
HpyCH4III	ACNGT	3 cut(s)	66, 563, 1561
HpyCH4IV	ACGT	2 cut(s)	1051, 1543
HpyF10VI	GCNNNNNNNGC	6 cut(s)	224, 340, 916, 1076, 1463, 1699
HpyF3I	CTNAG	7 cut(s)	437, 636, 763, 769, 1043, 1344, 1461
HpySE526I	ACGT	2 cut(s)	1051, 1543
Hsp92II	CATG	9 cut(s)	265, 383, 683, 883, 910, 919, 928, 1553, 1673
HspAI	GCGC	1 cut(s)	328
Ksp22I	TGATCA	2 cut(s)	130, 882
KspAI	GTTAAC	1 cut(s)	757
LguI	GCTCTTC	2 cut(s)	465, 849
LmnI	GCTCC	4 cut(s)	154, 223, 720, 1647
Lsp1109I	GCAGC	3 cut(s)	144, 1098, 1441
LweI	GCATC	2 cut(s)	91, 1066
MaeI	CTAG	6 cut(s)	41, 344, 711, 903, 1284, 1451
MaeII	ACGT	2 cut(s)	1051, 1543
MaeIII	GTNAC	4 cut(s)	368, 1010, 1247, 1528
MbiI	CCGCTC	2 cut(s)	338, 658
MflI	RGATCY	3 cut(s)	870, 1420, 1567
MhlI	GDGCHC	5 cut(s)	261, 460, 473, 802, 844
MluCI	AATT	9 cut(s)	316, 450, 893, 897, 948, 1062, 1291, 1393, 1576
MlyI	GAGTC	4 cut(s)	393, 761, 1031, 1235
MmeI	TCCRAC	2 cut(s)	1543, 1665
Mph1103I	ATGCAT	1 cut(s)	1081
MseI	TTAA	5 cut(s)	689, 756, 896, 1236, 1705
MslI	CAYNNNNRTG	1 cut(s)	1230
MspI	CCGG	4 cut(s)	53, 184, 305, 1126
MspR9I	CCNGG	5 cut(s)	268, 305, 443, 1092, 1127
Mva1269I	GAATGC	2 cut(s)	145, 1142
MvaI	CCWGG	3 cut(s)	268, 443, 1092
MwoI	GCNNNNNNNGC	6 cut(s)	224, 340, 916, 1076, 1463, 1699
NciI	CCSGG	2 cut(s)	305, 1127
NcoI	CCATGG	2 cut(s)	379, 924
NdeI	CATATG	1 cut(s)	630
NheI	GCTAGC	2 cut(s)	902, 1450
NlaIII	CATG	9 cut(s)	265, 383, 683, 883, 910, 919, 928, 1553, 1673
NlaIV	GGNNCC	2 cut(s)	508, 1643
NmuCI	GTSAC	3 cut(s)	368, 1010, 1247
NsiI	ATGCAT	1 cut(s)	1081
NspI	RCATGY	1 cut(s)	910
PaeI	GCATGC	1 cut(s)	910
PagI	TCATGA	2 cut(s)	879, 1669
PaqCI	CACCTGC	1 cut(s)	356
PasI	CCCWGGG	1 cut(s)	1091
PciSI	GCTCTTC	2 cut(s)	465, 849
PcsI	WCGNNNNNNNCGW	2 cut(s)	1499, 1540
PctI	GAATGC	2 cut(s)	145, 1142
PfeI	GAWTC	4 cut(s)	410, 426, 1340, 1629
PfoI	TCCNGGA	1 cut(s)	1125
PkrI	GCNGC	7 cut(s)	87, 90, 159, 550, 746, 1088, 1456
PleI	GAGTC	4 cut(s)	392, 761, 1031, 1235
PpsI	GAGTC	4 cut(s)	392, 761, 1031, 1235
PpuMI	RGGWCCY	1 cut(s)	125
PshBI	ATTAAT	1 cut(s)	896
Psp124BI	GAGCTC	1 cut(s)	261
Psp5II	RGGWCCY	1 cut(s)	125
Psp6I	CCWGG	3 cut(s)	266, 441, 1090
PspEI	GGTNACC	1 cut(s)	368
PspGI	CCWGG	3 cut(s)	266, 441, 1090
PspN4I	GGNNCC	2 cut(s)	508, 1643
PspPI	GGNCC	2 cut(s)	125, 178
PspPPI	RGGWCCY	1 cut(s)	125
PsuI	RGATCY	3 cut(s)	870, 1420, 1567
RsaI	GTAC	5 cut(s)	63, 861, 1323, 1487, 1592
RsaNI	GTAC	5 cut(s)	62, 860, 1322, 1486, 1591
RseI	CAYNNNNRTG	1 cut(s)	1230
SacI	GAGCTC	1 cut(s)	261
SapI	GCTCTTC	2 cut(s)	465, 849
SaqAI	TTAA	5 cut(s)	689, 756, 896, 1236, 1705
SatI	GCNGC	7 cut(s)	86, 89, 158, 549, 745, 1087, 1455
Sau96I	GGNCC	2 cut(s)	125, 178
ScaI	AGTACT	1 cut(s)	1592
SchI	GAGTC	4 cut(s)	393, 761, 1031, 1235
ScrFI	CCNGG	5 cut(s)	268, 305, 443, 1092, 1127
SduI	GDGCHC	5 cut(s)	261, 460, 473, 802, 844
SfaNI	GCATC	2 cut(s)	91, 1066
SfcI	CTRYAG	1 cut(s)	942
SinI	GGWCC	2 cut(s)	125, 178
SmiMI	CAYNNNNRTG	1 cut(s)	1230
SphI	GCATGC	1 cut(s)	910
Sse9I	AATT	9 cut(s)	316, 450, 893, 897, 948, 1062, 1291, 1393, 1576
SsiI	CCGC	8 cut(s)	86, 89, 119, 225, 336, 548, 658, 745
SspMI	CTAG	6 cut(s)	41, 344, 711, 903, 1284, 1451
SstI	GAGCTC	1 cut(s)	261
StyD4I	CCNGG	5 cut(s)	266, 303, 441, 1090, 1125
StyI	CCWWGG	3 cut(s)	379, 705, 924
TaaI	ACNGT	3 cut(s)	66, 563, 1561
TaiI	ACGT	2 cut(s)	1054, 1546
TaqI	TCGA	5 cut(s)	35, 1166, 1195, 1502, 1534
TasI	AATT	9 cut(s)	316, 450, 893, 897, 948, 1062, 1291, 1393, 1576
TatI	WGTACW	4 cut(s)	859, 1321, 1485, 1590
TauI	GCSGC	4 cut(s)	88, 91, 551, 747
TfiI	GAWTC	4 cut(s)	410, 426, 1340, 1629
Tru1I	TTAA	5 cut(s)	689, 756, 896, 1236, 1705
Tru9I	TTAA	5 cut(s)	689, 756, 896, 1236, 1705
TscAI	CASTG	2 cut(s)	1252, 1451
TseFI	GTSAC	3 cut(s)	368, 1010, 1247
TseI	GCWGC	3 cut(s)	157, 1086, 1454
Tsp45I	GTSAC	3 cut(s)	368, 1010, 1247
TspDTI	ATGAA	7 cut(s)	154, 868, 904, 1214, 1386, 1468, 1566
TspGWI	ACGGA	2 cut(s)	863, 1634
TspRI	CASTG	2 cut(s)	1252, 1451
VpaK11BI	GGWCC	2 cut(s)	125, 178
VspI	ATTAAT	1 cut(s)	896
XapI	RAATTY	3 cut(s)	316, 1291, 1576
XceI	RCATGY	1 cut(s)	910
XmiI	GTMKAC	2 cut(s)	403, 1035
XspI	CTAG	6 cut(s)	41, 344, 711, 903, 1284, 1451
ZrmI	AGTACT	1 cut(s)	1592
Zsp2I	ATGCAT	1 cut(s)	1081

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.