Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004038

Physical Location & Seq

Genomic Coordinates Forward (+)

213234 .. 217211

Gene Structure 3978 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015616

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGGAAGAGAGGGAGGACCTGAAGTCAATATTAGCATTCTTACCGGTGGTTGCACGGAGCTGGAGTCTTTTCTGGCCATCCCAAGTGGTGGAGACACTCAAGGACTTGGCCACAGGTCCCCACCACAGTGGGGTCAATTCCGGGGAGGTTTTATTCGCAGCCATCTCCGACCTCAGGCGCTCTCTTTCTCTCTCCTCCTCCTCCTCCTCTCATCCTCTCACTCCTGGTGCCGCTGACGGATACGCCCTCTTCTTCGATGAGGAACTAATTAGTGCTCTTCTTGGGTGCTCTCTATTTTGTTTGTTCCCAGTCATTGATAGAAGTGCCAAACATCTCCCAACAATCAACTTTGATCATTTGTTTGACGCTCTATATGACAGTCATAATCAAAAGCAGGAGAGTAAGATATGGTGCATTATACACTACTTTGAAAAGATAACTTCACGTATGCCTACTGGTTTTGTGTCTTTTGAGCGGAAAGTACTTCCTTTGGAACAAACTCCACTAAGAATTTCTTATCCGAAGGCTGAGTTTTGGAGCAATTCAGTTATTCCACTCTGCCATTTTGAGGTTCACAGGTCAGGCTTGATAGAAGATCAATCAAGTGGAGCTCTTGAAGTTGATTTTGCAAACAAGTATATAGGAGGTGGTGCTCTTCATAGGGGTTGCATACAGGAAGAGATCCGTTTCATGATCAACCCCGAGTTAATTGCCAGCATGCTGTTCATGCCTTCTATGGCAGATAATGAGGCTATAGAAATTGTTGGAGCCGAAAGATTTTCAAATTATACAGGGTATGCTTCTTCATTTCGTTTTTCTGGTGACTATGTGGATGAAAGGGATGCAGACTCTTTTGGAAGACGTAAAACCAGGATTATTGCAATAGACGCGTTATGCAGCCCAGGGATGAAACAGTATAAACAAGAGTTAATCCTCCGGGAGACCAATAAGGCGTTCTGTGGCTTTCTTCATCAATCGAAATATCAGGAGTACGGTAGATTGGTTCAAGAGAATGAACGACTGAACAGAGATTCTGCTATGATTCAATCTTTGGATTATGTGGATGATGTTGGGATTGCAACTGGGAATTGGGGATGTGGTGCTTTCGGAGGAGATCCTGAAGTGAAGGCCATAGTTCAATGGCTTGCTGCATCTCAGGCACGAAGACCTTTCATTTCATACTACACTTTTGGCATGAAGGCATTGGAAAATCTAGACCGGGTAAGTCGATGGATACAGCTGCACCAATGGACAGTAGGAGATCTCTGGGATCTGTTGGTGGATTACTCATTGCAGAGATTGAAGGGAGAGACTAGTGATGGATTCTTTACATGGCTTCTTCCATCTCTACTAGCCAGTGATACTGAGATGTTGGATTTGCCTGATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004553 GO:0004649 GO:0006282 GO:0006950 GO:0006952 GO:0006970 GO:0006974 GO:0006979 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009987 GO:0010035 GO:0010118 GO:0016787 GO:0016798 GO:0019219 GO:0019222 GO:0031323 GO:0033554 GO:0042221 GO:0043207 GO:0048583 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051052 GO:0051171 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0080135 GO:0090332 GO:0098542 GO:1901700 GO:2001020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PARG_cat

Protein Analysis

464

Amino Acids

52.35

Weight (kDa)

5.1

Isoelectric Point (pI)

47.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PARG_cat_N	PF20811	82 - 159	1.3e-21	Poly (ADP-ribose) glycohydrolase (PARG), helical domain
PARG_cat_C	PF05028	177 - 403	3.5e-87	Poly (ADP-ribose) glycohydrolase (PARG), Macro domain fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004038)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31865 AT2G31865 AT2G31865 AT2G31870 AT2G31870
fragaria_vesca	FvH4_1g00120 FvH4_1g00120 FvH4_1g00120 FvH4_1g00120 FvH4_1g00120 FvH4_1g00120 FvH4_6g52520 FvH4_6g52520 FvH4_6g52520 FvH4_6g52520
malus_domestica	MD15G1142600.v1.1
prunus_persica	Prupe.7G270600_v2.0.a1 Prupe.7G270600_v2.0.a1 Prupe.7G270600_v2.0.a1 Prupe.7G270600_v2.0.a1 Prupe.7G270600_v2.0.a1
pyrus_communis	pycom15g12860
rosa_chinensis	RchiOBHm_Chr2g0084431
rosa_laevigata	RLG00000015616
rosa_multiflora	Rmu_sc0009404.1_g000007 Rmu_sc0025868.1_g000002
rosa_roxburghii	Rroxscaffold_2G00156100
rosa_rugosa	Rorug01G0453500
rosa_samantha	Rh2AG001800 Rh2BG001500 Rh2CG001600 Rh2DG001900
rosa_wichuraiana	Rw2G000150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	227
AccB7I	CCANNNNNTGG	1 cut(s)	88
AccBSI	CCGCTC	1 cut(s)	475
AccII	CGCG	1 cut(s)	890
AciI	CCGC	2 cut(s)	231, 475
AclWI	GGATC	3 cut(s)	676, 1109, 1278
AcoI	YGGCCR	2 cut(s)	74, 108
AcsI	RAATTY	1 cut(s)	510
AcuI	CTGAAG	2 cut(s)	41, 1140
AfaI	GTAC	2 cut(s)	483, 992
AfiI	CCNNNNNNNGG	4 cut(s)	88, 130, 174, 568
AflIII	ACRYGT	1 cut(s)	888
AgeI	ACCGGT	1 cut(s)	43
AgsI	TTSAA	7 cut(s)	431, 617, 783, 1007, 1046, 1139, 1303
AhdI	GACNNNNNGTC	1 cut(s)	22
AhlI	ACTAGT	1 cut(s)	1313
AjnI	CCWGG	3 cut(s)	223, 869, 901
AjuI	GAANNNNNNNTTGG	2 cut(s)	938, 970
AleI	CACNNNNGTG	1 cut(s)	126
AluBI	AGCT	3 cut(s)	60, 611, 1240
AluI	AGCT	3 cut(s)	60, 611, 1240
Alw21I	GWGCWC	4 cut(s)	277, 290, 613, 655
Alw26I	GTCTC	3 cut(s)	86, 935, 1304
AlwI	GGATC	3 cut(s)	676, 1109, 1278
Ama87I	CYCGRG	1 cut(s)	701
AoxI	GGCC	3 cut(s)	74, 108, 1128
ApeKI	GCWGC	4 cut(s)	158, 897, 1148, 1240
ApoI	RAATTY	1 cut(s)	510
AsiGI	ACCGGT	1 cut(s)	43
AspLEI	GCGC	1 cut(s)	180
AspS9I	GGNCC	2 cut(s)	16, 116
AsuC2I	CCSGG	3 cut(s)	142, 938, 1220
AsuHPI	GGTGA	1 cut(s)	833
AvaI	CYCGRG	1 cut(s)	701
AvaII	GGWCC	2 cut(s)	16, 116
AxyI	CCTNAGG	1 cut(s)	173
BalI	TGGCCA	2 cut(s)	76, 110
BanI	GGYRCC	1 cut(s)	227
BanII	GRGCYC	1 cut(s)	613
BbsI	GAAGAC	2 cut(s)	865, 1171
Bbv12I	GWGCWC	4 cut(s)	277, 290, 613, 655
BbvI	GCAGC	4 cut(s)	170, 909, 1135, 1227
BccI	CCATC	5 cut(s)	85, 170, 1224, 1313, 1351
BcgI	CGANNNNNNTGC	2 cut(s)	692, 726
BciT130I	CCWGG	3 cut(s)	225, 871, 903
BciVI	GTATCC	2 cut(s)	233, 1227
BclI	TGATCA	2 cut(s)	352, 693
BcnI	CCSGG	3 cut(s)	142, 938, 1220
BcoDI	GTCTC	3 cut(s)	86, 935, 1304
BcuI	ACTAGT	1 cut(s)	1313
BfaI	CTAG	3 cut(s)	1214, 1314, 1352
BfmI	CTRYAG	1 cut(s)	753
BfoI	RGCGCY	1 cut(s)	181
BfuI	GTATCC	2 cut(s)	233, 1227
BglII	AGATCT	1 cut(s)	1261
BisI	GCNGC	5 cut(s)	159, 231, 898, 1149, 1241
BlsI	GCNGC	5 cut(s)	160, 232, 899, 1150, 1242
BmcAI	AGTACT	1 cut(s)	483
Bme1390I	CCNGG	6 cut(s)	142, 225, 871, 903, 938, 1220
Bme18I	GGWCC	2 cut(s)	16, 116
BmeRI	GACNNNNNGTC	1 cut(s)	22
BmeT110I	CYCGRG	1 cut(s)	701
BmgT120I	GGNCC	2 cut(s)	16, 116
BmiI	GGNNCC	3 cut(s)	118, 229, 769
BmrFI	CCNGG	6 cut(s)	142, 225, 871, 903, 938, 1220
BmrI	ACTGGG	2 cut(s)	302, 1092
BmsI	GCATC	2 cut(s)	832, 1160
BmuI	ACTGGG	2 cut(s)	302, 1092
BpiI	GAAGAC	2 cut(s)	865, 1171
BpmI	CTGGAG	1 cut(s)	82
BpuEI	CTTGAG	1 cut(s)	83
BpuMI	CCSGG	3 cut(s)	142, 938, 1220
BsaAI	YACGTR	1 cut(s)	446
BsaI	GGTCTC	1 cut(s)	935
BsaJI	CCNNGG	3 cut(s)	141, 901, 902
BsaWI	WCCGGW	1 cut(s)	43
BsaXI	ACNNNNNCTCC	2 cut(s)	49, 79
Bsc4I	CCNNNNNNNGG	4 cut(s)	88, 130, 174, 568
Bse118I	RCCGGY	1 cut(s)	43
Bse1I	ACTGG	4 cut(s)	308, 460, 1087, 1356
Bse21I	CCTNAGG	1 cut(s)	173
Bse3DI	GCAATG	1 cut(s)	1289
BseBI	CCWGG	3 cut(s)	225, 871, 903
BseDI	CCNNGG	3 cut(s)	141, 901, 902
BseGI	GGATG	7 cut(s)	77, 211, 838, 847, 912, 1069, 1100
BseLI	CCNNNNNNNGG	4 cut(s)	88, 130, 174, 568
BseMI	GCAATG	1 cut(s)	1289
BseMII	CTCAG	4 cut(s)	187, 519, 1169, 1356
BseNI	ACTGG	4 cut(s)	308, 460, 1087, 1356
BseRI	GAGGAG	6 cut(s)	184, 187, 190, 193, 196, 1125
BseXI	GCAGC	4 cut(s)	170, 909, 1135, 1227
BsgI	GTGCAG	1 cut(s)	1226
Bsh1236I	CGCG	1 cut(s)	890
BshFI	GGCC	3 cut(s)	76, 110, 1130
BshNI	GGYRCC	1 cut(s)	227
BshTI	ACCGGT	1 cut(s)	43
BsiHKAI	GWGCWC	4 cut(s)	277, 290, 613, 655
BsiHKCI	CYCGRG	1 cut(s)	701
BsiSI	CCGG	4 cut(s)	44, 141, 937, 1219
BslFI	GGGAC	1 cut(s)	102
BslI	CCNNNNNNNGG	4 cut(s)	88, 130, 174, 568
BsmAI	GTCTC	3 cut(s)	86, 935, 1304
BsmFI	GGGAC	1 cut(s)	102
BsmI	GAATGC	1 cut(s)	35
BsnI	GGCC	3 cut(s)	76, 110, 1130
Bso31I	GGTCTC	1 cut(s)	935
BsoBI	CYCGRG	1 cut(s)	701
Bsp1286I	GDGCHC	4 cut(s)	277, 290, 613, 655
Bsp143I	GATC	7 cut(s)	352, 595, 681, 693, 1114, 1261, 1270
BspACI	CCGC	2 cut(s)	231, 475
BspANI	GGCC	3 cut(s)	76, 110, 1130
BspCNI	CTCAG	4 cut(s)	186, 520, 1168, 1357
BspFNI	CGCG	1 cut(s)	890
BspHI	TCATGA	1 cut(s)	690
BspLI	GGNNCC	3 cut(s)	118, 229, 769
BspPI	GGATC	3 cut(s)	676, 1109, 1278
BspQI	GCTCTTC	2 cut(s)	282, 660
BspT107I	GGYRCC	1 cut(s)	227
BspTNI	GGTCTC	1 cut(s)	935
BsrBI	CCGCTC	1 cut(s)	475
BsrDI	GCAATG	1 cut(s)	1289
BsrFI	RCCGGY	1 cut(s)	43
BsrI	ACTGG	4 cut(s)	308, 460, 1087, 1356
BssAI	RCCGGY	1 cut(s)	43
BssECI	CCNNGG	3 cut(s)	141, 901, 902
BssMI	GATC	7 cut(s)	352, 595, 681, 693, 1114, 1261, 1270
Bst2UI	CCWGG	3 cut(s)	225, 871, 903
Bst4CI	ACNGT	5 cut(s)	128, 380, 915, 995, 1255
Bst6I	CTCTTC	4 cut(s)	254, 282, 660, 672
BstBAI	YACGTR	1 cut(s)	446
BstC8I	GCNNGC	3 cut(s)	715, 719, 1146
BstDEI	CTNAG	5 cut(s)	173, 506, 528, 1155, 1365
BstF5I	GGATG	7 cut(s)	77, 211, 838, 847, 912, 1069, 1100
BstFNI	CGCG	1 cut(s)	890
BstH2I	RGCGCY	1 cut(s)	181
BstHHI	GCGC	1 cut(s)	180
BstKTI	GATC	7 cut(s)	355, 598, 684, 696, 1117, 1264, 1273
BstMAI	GTCTC	3 cut(s)	86, 935, 1304
BstMBI	GATC	7 cut(s)	352, 595, 681, 693, 1114, 1261, 1270
BstMWI	GCNNNNNNNGC	3 cut(s)	727, 887, 1157
BstNI	CCWGG	3 cut(s)	225, 871, 903
BstNSI	RCATGY	1 cut(s)	721
BstSCI	CCNGG	6 cut(s)	140, 223, 869, 901, 936, 1218
BstSFI	CTRYAG	1 cut(s)	753
BstUI	CGCG	1 cut(s)	890
BstV1I	GCAGC	4 cut(s)	170, 909, 1135, 1227
BstV2I	GAAGAC	2 cut(s)	865, 1171
BstX2I	RGATCY	4 cut(s)	681, 1114, 1261, 1270
BstXI	CCANNNNNNTGG	1 cut(s)	128
BstYI	RGATCY	4 cut(s)	681, 1114, 1261, 1270
Bsu36I	CCTNAGG	1 cut(s)	173
BsuI	GTATCC	2 cut(s)	233, 1227
BsuRI	GGCC	3 cut(s)	76, 110, 1130
BtsCI	GGATG	7 cut(s)	77, 211, 838, 847, 912, 1069, 1100
BtsIMutI	CAGTG	2 cut(s)	133, 1363
Cac8I	GCNNGC	3 cut(s)	715, 719, 1146
CciI	TCATGA	1 cut(s)	690
CfoI	GCGC	1 cut(s)	180
Cfr10I	RCCGGY	1 cut(s)	43
Cfr13I	GGNCC	2 cut(s)	16, 116
CseI	GACGC	2 cut(s)	374, 896
Csp6I	GTAC	2 cut(s)	482, 991
CspAI	ACCGGT	1 cut(s)	43
CviAII	CATG	5 cut(s)	691, 718, 727, 1195, 1332
CviQI	GTAC	2 cut(s)	482, 991
DdeI	CTNAG	5 cut(s)	173, 506, 528, 1155, 1365
DpnI	GATC	7 cut(s)	354, 597, 683, 695, 1116, 1263, 1272
DpnII	GATC	7 cut(s)	352, 595, 681, 693, 1114, 1261, 1270
DriI	GACNNNNNGTC	1 cut(s)	22
EaeI	YGGCCR	2 cut(s)	74, 108
Eam1104I	CTCTTC	4 cut(s)	254, 282, 660, 672
Eam1105I	GACNNNNNGTC	1 cut(s)	22
EarI	CTCTTC	4 cut(s)	254, 282, 660, 672
Ecl136II	GAGCTC	1 cut(s)	611
Eco24I	GRGCYC	1 cut(s)	613
Eco31I	GGTCTC	1 cut(s)	935
Eco47I	GGWCC	2 cut(s)	16, 116
Eco53kI	GAGCTC	1 cut(s)	611
Eco57I	CTGAAG	2 cut(s)	41, 1140
Eco81I	CCTNAGG	1 cut(s)	173
Eco88I	CYCGRG	1 cut(s)	701
EcoICRI	GAGCTC	1 cut(s)	611
EcoO109I	RGGNCCY	2 cut(s)	16, 116
EcoRII	CCWGG	3 cut(s)	223, 869, 901
EcoT38I	GRGCYC	1 cut(s)	613
FaeI	CATG	5 cut(s)	694, 721, 730, 1198, 1335
FalI	AAGNNNNNCTT	2 cut(s)	499, 531
FaqI	GGGAC	1 cut(s)	102
FatI	CATG	5 cut(s)	690, 717, 726, 1194, 1331
FbaI	TGATCA	2 cut(s)	352, 693
Fnu4HI	GCNGC	5 cut(s)	159, 231, 898, 1149, 1241
FokI	GGATG	7 cut(s)	64, 198, 845, 854, 919, 1076, 1107
FriOI	GRGCYC	1 cut(s)	613
Fsp4HI	GCNGC	5 cut(s)	159, 231, 898, 1149, 1241
FspBI	CTAG	3 cut(s)	1214, 1314, 1352
GlaI	GCGC	1 cut(s)	179
GluI	GCNGC	5 cut(s)	159, 231, 898, 1149, 1241
GsuI	CTGGAG	1 cut(s)	82
HaeII	RGCGCY	1 cut(s)	181
HaeIII	GGCC	3 cut(s)	76, 110, 1130
HapII	CCGG	4 cut(s)	44, 141, 937, 1219
HgaI	GACGC	2 cut(s)	374, 896
HhaI	GCGC	1 cut(s)	180
Hin1II	CATG	5 cut(s)	694, 721, 730, 1198, 1335
Hin6I	GCGC	1 cut(s)	178
HinP1I	GCGC	1 cut(s)	178
HinfI	GANTC	5 cut(s)	64, 848, 1031, 1042, 1323
HpaII	CCGG	4 cut(s)	44, 141, 937, 1219
HphI	GGTGA	1 cut(s)	833
Hpy166II	GTNNAC	1 cut(s)	574
Hpy188I	TCNGA	3 cut(s)	169, 522, 1109
Hpy188III	TCNNGA	6 cut(s)	614, 691, 986, 1007, 1118, 1214
Hpy8I	GTNNAC	1 cut(s)	574
HpyAV	CCTTC	5 cut(s)	517, 741, 1120, 1192, 1297
HpyCH4III	ACNGT	5 cut(s)	128, 380, 915, 995, 1255
HpyCH4IV	ACGT	2 cut(s)	445, 862
HpyF10VI	GCNNNNNNNGC	3 cut(s)	727, 887, 1157
HpyF3I	CTNAG	5 cut(s)	173, 506, 528, 1155, 1365
HpySE526I	ACGT	2 cut(s)	445, 862
Hsp92II	CATG	5 cut(s)	694, 721, 730, 1198, 1335
HspAI	GCGC	1 cut(s)	178
Ksp22I	TGATCA	2 cut(s)	352, 693
Kzo9I	GATC	7 cut(s)	352, 595, 681, 693, 1114, 1261, 1270
LguI	GCTCTTC	2 cut(s)	282, 660
LmnI	GCTCC	4 cut(s)	57, 537, 608, 767
Lsp1109I	GCAGC	4 cut(s)	170, 909, 1135, 1227
LweI	GCATC	2 cut(s)	832, 1160
MaeI	CTAG	3 cut(s)	1214, 1314, 1352
MaeII	ACGT	2 cut(s)	445, 862
MaeIII	GTNAC	1 cut(s)	821
MalI	GATC	7 cut(s)	354, 597, 683, 695, 1116, 1263, 1272
MbiI	CCGCTC	1 cut(s)	475
MboI	GATC	7 cut(s)	352, 595, 681, 693, 1114, 1261, 1270
MflI	RGATCY	4 cut(s)	681, 1114, 1261, 1270
MhlI	GDGCHC	4 cut(s)	277, 290, 613, 655
MlsI	TGGCCA	2 cut(s)	76, 110
MluCI	AATT	8 cut(s)	136, 267, 510, 541, 708, 759, 784, 1087
MluI	ACGCGT	1 cut(s)	888
MluNI	TGGCCA	2 cut(s)	76, 110
MlyI	GAGTC	2 cut(s)	73, 842
MmeI	TCCRAC	3 cut(s)	192, 745, 1353
Mox20I	TGGCCA	2 cut(s)	76, 110
MscI	TGGCCA	2 cut(s)	76, 110
MseI	TTAA	2 cut(s)	707, 929
MslI	CAYNNNNRTG	1 cut(s)	126
Msp20I	TGGCCA	2 cut(s)	76, 110
MspA1I	CMGCKG	2 cut(s)	233, 1240
MspI	CCGG	4 cut(s)	44, 141, 937, 1219
MspR9I	CCNGG	6 cut(s)	142, 225, 871, 903, 938, 1220
Mva1269I	GAATGC	1 cut(s)	35
MvaI	CCWGG	3 cut(s)	225, 871, 903
MvnI	CGCG	1 cut(s)	890
MwoI	GCNNNNNNNGC	3 cut(s)	727, 887, 1157
NciI	CCSGG	3 cut(s)	142, 938, 1220
NdeII	GATC	7 cut(s)	352, 595, 681, 693, 1114, 1261, 1270
NlaIII	CATG	5 cut(s)	694, 721, 730, 1198, 1335
NlaIV	GGNNCC	3 cut(s)	118, 229, 769
NmuCI	GTSAC	1 cut(s)	821
NspI	RCATGY	1 cut(s)	721
OliI	CACNNNNGTG	1 cut(s)	126
PaeI	GCATGC	1 cut(s)	721
PagI	TCATGA	1 cut(s)	690
PasI	CCCWGGG	1 cut(s)	902
PciSI	GCTCTTC	2 cut(s)	282, 660
PctI	GAATGC	1 cut(s)	35
PfeI	GAWTC	3 cut(s)	1031, 1042, 1323
PflMI	CCANNNNNTGG	1 cut(s)	88
PfoI	TCCNGGA	1 cut(s)	936
PinAI	ACCGGT	1 cut(s)	43
PkrI	GCNGC	5 cut(s)	160, 232, 899, 1150, 1242
PleI	GAGTC	2 cut(s)	72, 842
PpsI	GAGTC	2 cut(s)	72, 842
Ppu21I	YACGTR	1 cut(s)	446
PpuMI	RGGWCCY	2 cut(s)	16, 116
Psp124BI	GAGCTC	1 cut(s)	613
Psp5II	RGGWCCY	2 cut(s)	16, 116
Psp6I	CCWGG	3 cut(s)	223, 869, 901
PspGI	CCWGG	3 cut(s)	223, 869, 901
PspN4I	GGNNCC	3 cut(s)	118, 229, 769
PspPI	GGNCC	2 cut(s)	16, 116
PspPPI	RGGWCCY	2 cut(s)	16, 116
PsuI	RGATCY	4 cut(s)	681, 1114, 1261, 1270
PvuII	CAGCTG	1 cut(s)	1240
RsaI	GTAC	2 cut(s)	483, 992
RsaNI	GTAC	2 cut(s)	482, 991
RseI	CAYNNNNRTG	1 cut(s)	126
SacI	GAGCTC	1 cut(s)	613
SapI	GCTCTTC	2 cut(s)	282, 660
SaqAI	TTAA	2 cut(s)	707, 929
SatI	GCNGC	5 cut(s)	159, 231, 898, 1149, 1241
Sau3AI	GATC	7 cut(s)	352, 595, 681, 693, 1114, 1261, 1270
Sau96I	GGNCC	2 cut(s)	16, 116
ScaI	AGTACT	1 cut(s)	483
SchI	GAGTC	2 cut(s)	73, 842
ScrFI	CCNGG	6 cut(s)	142, 225, 871, 903, 938, 1220
SduI	GDGCHC	4 cut(s)	277, 290, 613, 655
SfaNI	GCATC	2 cut(s)	832, 1160
SfcI	CTRYAG	1 cut(s)	753
SinI	GGWCC	2 cut(s)	16, 116
SmiMI	CAYNNNNRTG	1 cut(s)	126
SmlI	CTYRAG	1 cut(s)	98
SmoI	CTYRAG	1 cut(s)	98
SpeI	ACTAGT	1 cut(s)	1313
SphI	GCATGC	1 cut(s)	721
Sse9I	AATT	8 cut(s)	136, 267, 510, 541, 708, 759, 784, 1087
SsiI	CCGC	2 cut(s)	231, 475
SspI	AATATT	1 cut(s)	30
SspMI	CTAG	3 cut(s)	1214, 1314, 1352
SstI	GAGCTC	1 cut(s)	613
StyD4I	CCNGG	6 cut(s)	140, 223, 869, 901, 936, 1218
TaaI	ACNGT	5 cut(s)	128, 380, 915, 995, 1255
TaiI	ACGT	2 cut(s)	448, 865
TaqI	TCGA	3 cut(s)	255, 977, 1228
TasI	AATT	8 cut(s)	136, 267, 510, 541, 708, 759, 784, 1087
TatI	WGTACW	1 cut(s)	481
TauI	GCSGC	1 cut(s)	233
TfiI	GAWTC	3 cut(s)	1031, 1042, 1323
Tru1I	TTAA	2 cut(s)	707, 929
Tru9I	TTAA	2 cut(s)	707, 929
TscAI	CASTG	2 cut(s)	133, 1363
TseFI	GTSAC	1 cut(s)	821
TseI	GCWGC	4 cut(s)	158, 897, 1148, 1240
Tsp45I	GTSAC	1 cut(s)	821
TspGWI	ACGGA	3 cut(s)	70, 252, 674
TspRI	CASTG	2 cut(s)	133, 1363
Van91I	CCANNNNNTGG	1 cut(s)	88
VpaK11BI	GGWCC	2 cut(s)	16, 116
XapI	RAATTY	1 cut(s)	510
XbaI	TCTAGA	1 cut(s)	1213
XceI	RCATGY	1 cut(s)	721
XspI	CTAG	3 cut(s)	1214, 1314, 1352
ZrmI	AGTACT	1 cut(s)	483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.