Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0004038

Physical Location & Seq

Genomic Coordinates Forward (+)

189257 .. 193282

Gene Structure 4026 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG001500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGGAAGAGAGGGAGGACCTGAAGTCAATATTAGCATTCTTACCGGTGGTTGCACGGAGCTGGAGTCTTTTCTGGCCATCCCAAGTGGTGGAGACACTCAAGGACTTGGCCAGAGGTCCCCAGCACAGTGGGGTCAATTCCGGGGAGGTTTTATTCGCAGCCATCTCCGACCTCAGGCGCTCTCTCTCTCTCTCCTCCTCCTCCTCCTCTCATCCTCTCACTCCTTGTGCCGCTGACGGATACGCCCTCTTCTTCGATGAGATCATGCCCAGGGAGGAATCTGGAAAATGGTTCGGAGAAGTAGTCCCCGCATTAGCACATTTGCTTTTGCGGTTGCCCTCTTTGTTACAAGTTCACTATCAAAATGCAGATGGGCTTATTAATGGACTCAATACTGCTCTTCGTCTACTTGATTCACAACAACCAGGATTAGTGTTCCTCAGCCAGGAACTAATTAGTGCTCTTCTTGGGTGCTCTCTATTTTGTTTGTTCCCAGTCATTGATAGAAGTGCCAAACATCTCCCAACAATCAACTTTGATCATTTGTTTGACGCTCTATATGACAGTCATAATCAAAAGCAGGAGAGTAAGATATGGTGCATTATACACTACTTTGAAAAGATAACTTCACGTATGCCTACTGGTTTTGTGTCGTTTGAGCGGAAAGTACTTCCTTTGGAACAAACTCCACTAAGAATTTCTTATCCGAAGGCTGAGTTTTGGAGCAATTCAGTCATTCCACTCTGCCGTTTTGAGGTTCACAGGTCAGGCTTGATAGAAGATCAATCAAGTGGAGCTCTCGAAGTTGATTTTGCAAACAAGTATATAGGAGGTGGTGCTCTTCATAGGGGCTGCGTACAGGAAGAGATCCGTTTCATGATCAACCCCGAGTTAATTGCCAGCATGCTGTTCATGCCTTCTATGGCAGATAATGAGGCTATAGAAATTGTTGGAGCCGAAAGATTTTCAAATTATACAGGGTATGCTTCTTCATTTCGTTTTTCTGGTGACTATGTGGATGAAAGGGATGCAGACTCTTTTGGAAGACGTAAAACCAGGATTATTGCAATAGATGCGTTATGCAGCCCAGGGATGAAACAGTATAAACAAGAGTTAATCCTCCGGGAGACCAATAAGGCGTTCTGTGGCTTTCTTCATCAATCGAAATATCAGGAGTACAGTAGATTGGTTCGAGAGAATGAACGACTGAACAGAGATTCTGCTATGATTCAATCTTTGGATTATGTGGATGATATTGGGATTGCAACTGGGAATTGGGGATGTGGTGCTTTCGGAGGAGATCCTGAAGTGAAGGCCATAGTTCAATGGCTTGCTGCATCTCAGGCACGAAGACTTTTCATTTCCTACTACACTTTTGGCATGAAGGCATTGGAAAACCTAGACCGGGTAAGTCGATGGATACAGCTGCACCAATGGACAGTAGGAGATCTCTGGGATCTGTTGGTGGATTACTCATTGCAGAGATTGAAGGGAGAGACTAATGATGGATTCTTTACATGGCTTCTTCCATCTCTACTAGCCAGTGATACTGAGATGTTGGATTTGCCTGATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004553 GO:0004649 GO:0006282 GO:0006950 GO:0006952 GO:0006970 GO:0006974 GO:0006979 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009987 GO:0010035 GO:0010118 GO:0016787 GO:0016798 GO:0019219 GO:0019222 GO:0031323 GO:0033554 GO:0042221 GO:0043207 GO:0048583 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051052 GO:0051171 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0080135 GO:0090332 GO:0098542 GO:1901700 GO:2001020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PARG_cat

Protein Analysis

525

Amino Acids

59.42

Weight (kDa)

5.24

Isoelectric Point (pI)

48.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PARG_cat_N	PF20811	90 - 221	1.6e-35	Poly (ADP-ribose) glycohydrolase (PARG), helical domain
PARG_cat_C	PF05028	239 - 465	9.2e-87	Poly (ADP-ribose) glycohydrolase (PARG), Macro domain fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004038)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31865 AT2G31865 AT2G31865 AT2G31870 AT2G31870
fragaria_vesca	FvH4_1g00120 FvH4_1g00120 FvH4_1g00120 FvH4_1g00120 FvH4_1g00120 FvH4_1g00120 FvH4_6g52520 FvH4_6g52520 FvH4_6g52520 FvH4_6g52520
malus_domestica	MD15G1142600.v1.1
prunus_persica	Prupe.7G270600_v2.0.a1 Prupe.7G270600_v2.0.a1 Prupe.7G270600_v2.0.a1 Prupe.7G270600_v2.0.a1 Prupe.7G270600_v2.0.a1
pyrus_communis	pycom15g12860
rosa_chinensis	RchiOBHm_Chr2g0084431
rosa_laevigata	RLG00000015616
rosa_multiflora	Rmu_sc0009404.1_g000007 Rmu_sc0025868.1_g000002
rosa_roxburghii	Rroxscaffold_2G00156100
rosa_rugosa	Rorug01G0453500
rosa_samantha	Rh2AG001800 Rh2BG001500 Rh2CG001600 Rh2DG001900
rosa_wichuraiana	Rw2G000150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	88
AccBSI	CCGCTC	1 cut(s)	661
AccI	GTMKAC	1 cut(s)	406
AciI	CCGC	4 cut(s)	231, 309, 331, 661
AclWI	GGATC	3 cut(s)	862, 1295, 1464
AcoI	YGGCCR	2 cut(s)	74, 108
AcsI	RAATTY	1 cut(s)	696
AcuI	CTGAAG	2 cut(s)	41, 1326
AfaI	GTAC	3 cut(s)	669, 858, 1178
AfiI	CCNNNNNNNGG	5 cut(s)	88, 174, 445, 754, 1405
AgeI	ACCGGT	1 cut(s)	43
AgsI	TTSAA	5 cut(s)	617, 969, 1232, 1325, 1489
AhdI	GACNNNNNGTC	1 cut(s)	22
AjnI	CCWGG	5 cut(s)	269, 424, 444, 1055, 1087
AjuI	GAANNNNNNNTTGG	2 cut(s)	1124, 1156
AluBI	AGCT	3 cut(s)	60, 797, 1426
AluI	AGCT	3 cut(s)	60, 797, 1426
Alw21I	GWGCWC	4 cut(s)	463, 476, 799, 841
Alw26I	GTCTC	3 cut(s)	86, 1121, 1490
AlwI	GGATC	3 cut(s)	862, 1295, 1464
Ama87I	CYCGRG	1 cut(s)	887
AoxI	GGCC	3 cut(s)	74, 108, 1314
ApeKI	GCWGC	5 cut(s)	158, 852, 1083, 1334, 1426
ApoI	RAATTY	1 cut(s)	696
AseI	ATTAAT	1 cut(s)	381
AsiGI	ACCGGT	1 cut(s)	43
AspLEI	GCGC	1 cut(s)	180
AspS9I	GGNCC	2 cut(s)	16, 116
AsuC2I	CCSGG	3 cut(s)	142, 1124, 1406
AsuHPI	GGTGA	1 cut(s)	1019
AvaI	CYCGRG	1 cut(s)	887
AvaII	GGWCC	2 cut(s)	16, 116
AxyI	CCTNAGG	1 cut(s)	173
BalI	TGGCCA	2 cut(s)	76, 110
BanII	GRGCYC	1 cut(s)	799
BbsI	GAAGAC	2 cut(s)	1051, 1357
Bbv12I	GWGCWC	4 cut(s)	463, 476, 799, 841
BbvCI	CCTCAGC	1 cut(s)	440
BbvI	GCAGC	5 cut(s)	170, 839, 1095, 1321, 1413
BccI	CCATC	6 cut(s)	85, 170, 365, 1410, 1499, 1537
BceAI	ACGGC	1 cut(s)	732
BcgI	CGANNNNNNTGC	2 cut(s)	878, 912
BciT130I	CCWGG	5 cut(s)	271, 426, 446, 1057, 1089
BciVI	GTATCC	2 cut(s)	233, 1413
BclI	TGATCA	2 cut(s)	538, 879
BcnI	CCSGG	3 cut(s)	142, 1124, 1406
BcoDI	GTCTC	3 cut(s)	86, 1121, 1490
BfaI	CTAG	2 cut(s)	1400, 1538
BfmI	CTRYAG	1 cut(s)	939
BfoI	RGCGCY	1 cut(s)	181
BfuI	GTATCC	2 cut(s)	233, 1413
BglII	AGATCT	1 cut(s)	1447
BisI	GCNGC	6 cut(s)	159, 231, 853, 1084, 1335, 1427
BlsI	GCNGC	6 cut(s)	160, 232, 854, 1085, 1336, 1428
BmcAI	AGTACT	1 cut(s)	669
Bme1390I	CCNGG	8 cut(s)	142, 271, 426, 446, 1057, 1089, 1124, 1406
Bme18I	GGWCC	2 cut(s)	16, 116
BmeRI	GACNNNNNGTC	1 cut(s)	22
BmeT110I	CYCGRG	1 cut(s)	887
BmgT120I	GGNCC	2 cut(s)	16, 116
BmiI	GGNNCC	2 cut(s)	118, 955
BmrFI	CCNGG	8 cut(s)	142, 271, 426, 446, 1057, 1089, 1124, 1406
BmrI	ACTGGG	2 cut(s)	488, 1278
BmsI	GCATC	3 cut(s)	1018, 1063, 1346
BmuI	ACTGGG	2 cut(s)	488, 1278
BpiI	GAAGAC	2 cut(s)	1051, 1357
BpmI	CTGGAG	1 cut(s)	82
Bpu10I	CCTNAGC	1 cut(s)	440
BpuEI	CTTGAG	1 cut(s)	83
BpuMI	CCSGG	3 cut(s)	142, 1124, 1406
BsaAI	YACGTR	1 cut(s)	632
BsaI	GGTCTC	1 cut(s)	1121
BsaJI	CCNNGG	5 cut(s)	141, 269, 270, 1087, 1088
BsaWI	WCCGGW	1 cut(s)	43
BsaXI	ACNNNNNCTCC	4 cut(s)	49, 79, 288, 318
Bsc4I	CCNNNNNNNGG	5 cut(s)	88, 174, 445, 754, 1405
Bse118I	RCCGGY	1 cut(s)	43
Bse1I	ACTGG	4 cut(s)	494, 646, 1273, 1542
Bse21I	CCTNAGG	1 cut(s)	173
Bse3DI	GCAATG	1 cut(s)	1475
BseBI	CCWGG	5 cut(s)	271, 426, 446, 1057, 1089
BseDI	CCNNGG	5 cut(s)	141, 269, 270, 1087, 1088
BseGI	GGATG	7 cut(s)	77, 211, 1024, 1033, 1098, 1255, 1286
BseLI	CCNNNNNNNGG	5 cut(s)	88, 174, 445, 754, 1405
BseMI	GCAATG	1 cut(s)	1475
BseMII	CTCAG	5 cut(s)	187, 454, 705, 1355, 1542
BseNI	ACTGG	4 cut(s)	494, 646, 1273, 1542
BseRI	GAGGAG	6 cut(s)	184, 187, 190, 193, 196, 1311
BseXI	GCAGC	5 cut(s)	170, 839, 1095, 1321, 1413
BseYI	CCCAGC	1 cut(s)	120
BsgI	GTGCAG	1 cut(s)	1412
BshFI	GGCC	3 cut(s)	76, 110, 1316
BshTI	ACCGGT	1 cut(s)	43
BsiHKAI	GWGCWC	4 cut(s)	463, 476, 799, 841
BsiHKCI	CYCGRG	1 cut(s)	887
BsiSI	CCGG	4 cut(s)	44, 141, 1123, 1405
BslFI	GGGAC	2 cut(s)	102, 290
BslI	CCNNNNNNNGG	5 cut(s)	88, 174, 445, 754, 1405
BsmAI	GTCTC	3 cut(s)	86, 1121, 1490
BsmFI	GGGAC	2 cut(s)	102, 290
BsmI	GAATGC	1 cut(s)	35
BsnI	GGCC	3 cut(s)	76, 110, 1316
Bso31I	GGTCTC	1 cut(s)	1121
BsoBI	CYCGRG	1 cut(s)	887
Bsp1286I	GDGCHC	4 cut(s)	463, 476, 799, 841
Bsp143I	GATC	8 cut(s)	261, 538, 781, 867, 879, 1300, 1447, 1456
BspACI	CCGC	4 cut(s)	231, 309, 331, 661
BspANI	GGCC	3 cut(s)	76, 110, 1316
BspCNI	CTCAG	5 cut(s)	186, 453, 706, 1354, 1543
BspHI	TCATGA	1 cut(s)	876
BspLI	GGNNCC	2 cut(s)	118, 955
BspPI	GGATC	3 cut(s)	862, 1295, 1464
BspQI	GCTCTTC	3 cut(s)	405, 468, 846
BspTNI	GGTCTC	1 cut(s)	1121
BsrBI	CCGCTC	1 cut(s)	661
BsrDI	GCAATG	1 cut(s)	1475
BsrFI	RCCGGY	1 cut(s)	43
BsrI	ACTGG	4 cut(s)	494, 646, 1273, 1542
BssAI	RCCGGY	1 cut(s)	43
BssECI	CCNNGG	5 cut(s)	141, 269, 270, 1087, 1088
BssMI	GATC	8 cut(s)	261, 538, 781, 867, 879, 1300, 1447, 1456
Bst2UI	CCWGG	5 cut(s)	271, 426, 446, 1057, 1089
Bst4CI	ACNGT	5 cut(s)	128, 566, 1101, 1181, 1441
Bst6I	CTCTTC	5 cut(s)	254, 405, 468, 846, 858
BstAPI	GCANNNNNTGC	1 cut(s)	1073
BstBAI	YACGTR	1 cut(s)	632
BstC8I	GCNNGC	3 cut(s)	901, 905, 1332
BstDEI	CTNAG	6 cut(s)	173, 440, 692, 714, 1341, 1551
BstENI	CCTNNNNNAGG	1 cut(s)	443
BstF5I	GGATG	7 cut(s)	77, 211, 1024, 1033, 1098, 1255, 1286
BstH2I	RGCGCY	1 cut(s)	181
BstHHI	GCGC	1 cut(s)	180
BstKTI	GATC	8 cut(s)	264, 541, 784, 870, 882, 1303, 1450, 1459
BstMAI	GTCTC	3 cut(s)	86, 1121, 1490
BstMBI	GATC	8 cut(s)	261, 538, 781, 867, 879, 1300, 1447, 1456
BstMWI	GCNNNNNNNGC	3 cut(s)	913, 1073, 1343
BstNI	CCWGG	5 cut(s)	271, 426, 446, 1057, 1089
BstNSI	RCATGY	1 cut(s)	907
BstSCI	CCNGG	8 cut(s)	140, 269, 424, 444, 1055, 1087, 1122, 1404
BstSFI	CTRYAG	1 cut(s)	939
BstV1I	GCAGC	5 cut(s)	170, 839, 1095, 1321, 1413
BstV2I	GAAGAC	2 cut(s)	1051, 1357
BstX2I	RGATCY	4 cut(s)	867, 1300, 1447, 1456
BstXI	CCANNNNNNTGG	1 cut(s)	128
BstYI	RGATCY	4 cut(s)	867, 1300, 1447, 1456
Bsu36I	CCTNAGG	1 cut(s)	173
BsuI	GTATCC	2 cut(s)	233, 1413
BsuRI	GGCC	3 cut(s)	76, 110, 1316
BtsCI	GGATG	7 cut(s)	77, 211, 1024, 1033, 1098, 1255, 1286
BtsIMutI	CAGTG	2 cut(s)	133, 1549
Cac8I	GCNNGC	3 cut(s)	901, 905, 1332
CciI	TCATGA	1 cut(s)	876
CfoI	GCGC	1 cut(s)	180
Cfr10I	RCCGGY	1 cut(s)	43
Cfr13I	GGNCC	2 cut(s)	16, 116
CseI	GACGC	1 cut(s)	560
Csp6I	GTAC	3 cut(s)	668, 857, 1177
CspAI	ACCGGT	1 cut(s)	43
CviAII	CATG	6 cut(s)	265, 877, 904, 913, 1381, 1518
CviQI	GTAC	3 cut(s)	668, 857, 1177
DdeI	CTNAG	6 cut(s)	173, 440, 692, 714, 1341, 1551
DpnI	GATC	8 cut(s)	263, 540, 783, 869, 881, 1302, 1449, 1458
DpnII	GATC	8 cut(s)	261, 538, 781, 867, 879, 1300, 1447, 1456
DriI	GACNNNNNGTC	1 cut(s)	22
EaeI	YGGCCR	2 cut(s)	74, 108
Eam1104I	CTCTTC	5 cut(s)	254, 405, 468, 846, 858
Eam1105I	GACNNNNNGTC	1 cut(s)	22
EarI	CTCTTC	5 cut(s)	254, 405, 468, 846, 858
Ecl136II	GAGCTC	1 cut(s)	797
Eco24I	GRGCYC	1 cut(s)	799
Eco31I	GGTCTC	1 cut(s)	1121
Eco47I	GGWCC	2 cut(s)	16, 116
Eco53kI	GAGCTC	1 cut(s)	797
Eco57I	CTGAAG	2 cut(s)	41, 1326
Eco81I	CCTNAGG	1 cut(s)	173
Eco88I	CYCGRG	1 cut(s)	887
EcoICRI	GAGCTC	1 cut(s)	797
EcoNI	CCTNNNNNAGG	1 cut(s)	443
EcoO109I	RGGNCCY	2 cut(s)	16, 116
EcoRII	CCWGG	5 cut(s)	269, 424, 444, 1055, 1087
EcoT38I	GRGCYC	1 cut(s)	799
FaeI	CATG	6 cut(s)	268, 880, 907, 916, 1384, 1521
FalI	AAGNNNNNCTT	2 cut(s)	685, 717
FaqI	GGGAC	2 cut(s)	102, 290
FatI	CATG	6 cut(s)	264, 876, 903, 912, 1380, 1517
FauI	CCCGC	1 cut(s)	316
FbaI	TGATCA	2 cut(s)	538, 879
FblI	GTMKAC	1 cut(s)	406
Fnu4HI	GCNGC	6 cut(s)	159, 231, 853, 1084, 1335, 1427
FokI	GGATG	7 cut(s)	64, 198, 1031, 1040, 1105, 1262, 1293
FriOI	GRGCYC	1 cut(s)	799
Fsp4HI	GCNGC	6 cut(s)	159, 231, 853, 1084, 1335, 1427
FspBI	CTAG	2 cut(s)	1400, 1538
GlaI	GCGC	1 cut(s)	179
GluI	GCNGC	6 cut(s)	159, 231, 853, 1084, 1335, 1427
GsaI	CCCAGC	1 cut(s)	124
GsuI	CTGGAG	1 cut(s)	82
HaeII	RGCGCY	1 cut(s)	181
HaeIII	GGCC	3 cut(s)	76, 110, 1316
HapII	CCGG	4 cut(s)	44, 141, 1123, 1405
HgaI	GACGC	1 cut(s)	560
HhaI	GCGC	1 cut(s)	180
Hin1II	CATG	6 cut(s)	268, 880, 907, 916, 1384, 1521
Hin6I	GCGC	1 cut(s)	178
HinP1I	GCGC	1 cut(s)	178
HinfI	GANTC	8 cut(s)	64, 278, 387, 413, 1034, 1217, 1228, 1509
HpaII	CCGG	4 cut(s)	44, 141, 1123, 1405
HphI	GGTGA	1 cut(s)	1019
Hpy166II	GTNNAC	3 cut(s)	355, 407, 760
Hpy188I	TCNGA	4 cut(s)	169, 296, 708, 1295
Hpy188III	TCNNGA	6 cut(s)	282, 800, 877, 1172, 1193, 1304
Hpy8I	GTNNAC	3 cut(s)	355, 407, 760
HpyAV	CCTTC	5 cut(s)	703, 927, 1306, 1378, 1483
HpyCH4III	ACNGT	5 cut(s)	128, 566, 1101, 1181, 1441
HpyCH4IV	ACGT	2 cut(s)	631, 1048
HpyF10VI	GCNNNNNNNGC	3 cut(s)	913, 1073, 1343
HpyF3I	CTNAG	6 cut(s)	173, 440, 692, 714, 1341, 1551
HpySE526I	ACGT	2 cut(s)	631, 1048
Hsp92II	CATG	6 cut(s)	268, 880, 907, 916, 1384, 1521
HspAI	GCGC	1 cut(s)	178
Ksp22I	TGATCA	2 cut(s)	538, 879
Kzo9I	GATC	8 cut(s)	261, 538, 781, 867, 879, 1300, 1447, 1456
LguI	GCTCTTC	3 cut(s)	405, 468, 846
LmnI	GCTCC	4 cut(s)	57, 723, 794, 953
Lsp1109I	GCAGC	5 cut(s)	170, 839, 1095, 1321, 1413
LweI	GCATC	3 cut(s)	1018, 1063, 1346
MaeI	CTAG	2 cut(s)	1400, 1538
MaeII	ACGT	2 cut(s)	631, 1048
MaeIII	GTNAC	2 cut(s)	345, 1007
MalI	GATC	8 cut(s)	263, 540, 783, 869, 881, 1302, 1449, 1458
MbiI	CCGCTC	1 cut(s)	661
MboI	GATC	8 cut(s)	261, 538, 781, 867, 879, 1300, 1447, 1456
MflI	RGATCY	4 cut(s)	867, 1300, 1447, 1456
MhlI	GDGCHC	4 cut(s)	463, 476, 799, 841
MlsI	TGGCCA	2 cut(s)	76, 110
MluCI	AATT	8 cut(s)	136, 453, 696, 727, 894, 945, 970, 1273
MluNI	TGGCCA	2 cut(s)	76, 110
MlyI	GAGTC	3 cut(s)	73, 381, 1028
MmeI	TCCRAC	3 cut(s)	192, 931, 1539
Mox20I	TGGCCA	2 cut(s)	76, 110
MscI	TGGCCA	2 cut(s)	76, 110
MseI	TTAA	3 cut(s)	381, 893, 1115
Msp20I	TGGCCA	2 cut(s)	76, 110
MspA1I	CMGCKG	2 cut(s)	233, 1426
MspI	CCGG	4 cut(s)	44, 141, 1123, 1405
MspR9I	CCNGG	8 cut(s)	142, 271, 426, 446, 1057, 1089, 1124, 1406
Mva1269I	GAATGC	1 cut(s)	35
MvaI	CCWGG	5 cut(s)	271, 426, 446, 1057, 1089
MwoI	GCNNNNNNNGC	3 cut(s)	913, 1073, 1343
NciI	CCSGG	3 cut(s)	142, 1124, 1406
NdeII	GATC	8 cut(s)	261, 538, 781, 867, 879, 1300, 1447, 1456
NlaIII	CATG	6 cut(s)	268, 880, 907, 916, 1384, 1521
NlaIV	GGNNCC	2 cut(s)	118, 955
NmuCI	GTSAC	1 cut(s)	1007
NspI	RCATGY	1 cut(s)	907
PaeI	GCATGC	1 cut(s)	907
PagI	TCATGA	1 cut(s)	876
PasI	CCCWGGG	2 cut(s)	270, 1088
PciSI	GCTCTTC	3 cut(s)	405, 468, 846
PctI	GAATGC	1 cut(s)	35
PfeI	GAWTC	5 cut(s)	278, 413, 1217, 1228, 1509
PflMI	CCANNNNNTGG	1 cut(s)	88
PfoI	TCCNGGA	1 cut(s)	1122
PinAI	ACCGGT	1 cut(s)	43
PkrI	GCNGC	6 cut(s)	160, 232, 854, 1085, 1336, 1428
PleI	GAGTC	3 cut(s)	72, 381, 1028
PpsI	GAGTC	3 cut(s)	72, 381, 1028
Ppu21I	YACGTR	1 cut(s)	632
PpuMI	RGGWCCY	2 cut(s)	16, 116
PshBI	ATTAAT	1 cut(s)	381
Psp124BI	GAGCTC	1 cut(s)	799
Psp5II	RGGWCCY	2 cut(s)	16, 116
Psp6I	CCWGG	5 cut(s)	269, 424, 444, 1055, 1087
PspFI	CCCAGC	1 cut(s)	120
PspGI	CCWGG	5 cut(s)	269, 424, 444, 1055, 1087
PspN4I	GGNNCC	2 cut(s)	118, 955
PspPI	GGNCC	2 cut(s)	16, 116
PspPPI	RGGWCCY	2 cut(s)	16, 116
PsuI	RGATCY	4 cut(s)	867, 1300, 1447, 1456
PvuII	CAGCTG	1 cut(s)	1426
RsaI	GTAC	3 cut(s)	669, 858, 1178
RsaNI	GTAC	3 cut(s)	668, 857, 1177
SacI	GAGCTC	1 cut(s)	799
SapI	GCTCTTC	3 cut(s)	405, 468, 846
SaqAI	TTAA	3 cut(s)	381, 893, 1115
SatI	GCNGC	6 cut(s)	159, 231, 853, 1084, 1335, 1427
Sau3AI	GATC	8 cut(s)	261, 538, 781, 867, 879, 1300, 1447, 1456
Sau96I	GGNCC	2 cut(s)	16, 116
ScaI	AGTACT	1 cut(s)	669
SchI	GAGTC	3 cut(s)	73, 381, 1028
ScrFI	CCNGG	8 cut(s)	142, 271, 426, 446, 1057, 1089, 1124, 1406
SduI	GDGCHC	4 cut(s)	463, 476, 799, 841
SfaNI	GCATC	3 cut(s)	1018, 1063, 1346
SfcI	CTRYAG	1 cut(s)	939
SinI	GGWCC	2 cut(s)	16, 116
SmlI	CTYRAG	1 cut(s)	98
SmoI	CTYRAG	1 cut(s)	98
SphI	GCATGC	1 cut(s)	907
Sse9I	AATT	8 cut(s)	136, 453, 696, 727, 894, 945, 970, 1273
SsiI	CCGC	4 cut(s)	231, 309, 331, 661
SspI	AATATT	1 cut(s)	30
SspMI	CTAG	2 cut(s)	1400, 1538
SstI	GAGCTC	1 cut(s)	799
StyD4I	CCNGG	8 cut(s)	140, 269, 424, 444, 1055, 1087, 1122, 1404
TaaI	ACNGT	5 cut(s)	128, 566, 1101, 1181, 1441
TaiI	ACGT	2 cut(s)	634, 1051
TaqI	TCGA	5 cut(s)	255, 801, 1163, 1192, 1414
TasI	AATT	8 cut(s)	136, 453, 696, 727, 894, 945, 970, 1273
TatI	WGTACW	2 cut(s)	667, 1176
TauI	GCSGC	1 cut(s)	233
TfiI	GAWTC	5 cut(s)	278, 413, 1217, 1228, 1509
Tru1I	TTAA	3 cut(s)	381, 893, 1115
Tru9I	TTAA	3 cut(s)	381, 893, 1115
TscAI	CASTG	2 cut(s)	133, 1549
TseFI	GTSAC	1 cut(s)	1007
TseI	GCWGC	5 cut(s)	158, 852, 1083, 1334, 1426
Tsp45I	GTSAC	1 cut(s)	1007
TspGWI	ACGGA	3 cut(s)	70, 252, 860
TspRI	CASTG	2 cut(s)	133, 1549
Van91I	CCANNNNNTGG	1 cut(s)	88
VpaK11BI	GGWCC	2 cut(s)	16, 116
VspI	ATTAAT	1 cut(s)	381
XagI	CCTNNNNNAGG	1 cut(s)	443
XapI	RAATTY	1 cut(s)	696
XceI	RCATGY	1 cut(s)	907
XmiI	GTMKAC	1 cut(s)	406
XspI	CTAG	2 cut(s)	1400, 1538
ZrmI	AGTACT	1 cut(s)	669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.