metalloendopeptidase activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05140 AT2G32480 AT2G32480 |
| fragaria_vesca | FvH4_6g43160 FvH4_6g43160 |
| malus_domestica | MD09G1110000.v1.1 |
| prunus_persica | Prupe.3G216500_v2.0.a1 Prupe.3G216500_v2.0.a1 Prupe.3G216500_v2.0.a1 |
| pyrus_communis | pycom09g03250 pycom17g09350 |
| rosa_chinensis | RchiOBHm_Chr2g0159081 |
| rosa_laevigata | RLG00000021136 |
| rosa_multiflora | Rmu_sc0003185.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00090800 |
| rosa_rugosa | Rorug02G0473900 |
| rosa_samantha | Rh2AG540700 Rh2BG553400 Rh2CG523800 Rh2DG563300 |
| rosa_wichuraiana | Rw2G044740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1034 |
| Acc65I | GGTACC | 1 cut(s) | 189 |
| AccB1I | GGYRCC | 1 cut(s) | 189 |
| AccIII | TCCGGA | 1 cut(s) | 934 |
| AciI | CCGC | 2 cut(s) | 326, 1139 |
| AclI | AACGTT | 1 cut(s) | 941 |
| AclWI | GGATC | 5 cut(s) | 87, 337, 350, 458, 1271 |
| AcsI | RAATTY | 1 cut(s) | 356 |
| AcuI | CTGAAG | 2 cut(s) | 669, 1242 |
| AfaI | GTAC | 3 cut(s) | 191, 618, 721 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 437 |
| AflII | CTTAAG | 1 cut(s) | 503 |
| AgsI | TTSAA | 4 cut(s) | 64, 257, 269, 593 |
| AjnI | CCWGG | 1 cut(s) | 631 |
| AleI | CACNNNNGTG | 1 cut(s) | 914 |
| AluBI | AGCT | 8 cut(s) | 227, 252, 272, 386, 545, 727, 1205, 1225 |
| AluI | AGCT | 8 cut(s) | 227, 252, 272, 386, 545, 727, 1205, 1225 |
| Alw26I | GTCTC | 3 cut(s) | 161, 897, 913 |
| AlwI | GGATC | 5 cut(s) | 87, 337, 350, 458, 1271 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1049 |
| Aor13HI | TCCGGA | 1 cut(s) | 934 |
| AoxI | GGCC | 1 cut(s) | 740 |
| ApeKI | GCWGC | 2 cut(s) | 668, 1115 |
| ApoI | RAATTY | 1 cut(s) | 356 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 153, 185 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 261, 627 |
| Asp718I | GGTACC | 1 cut(s) | 189 |
| AspS9I | GGNCC | 3 cut(s) | 374, 740, 1046 |
| AsuC2I | CCSGG | 2 cut(s) | 235, 739 |
| AsuHPI | GGTGA | 4 cut(s) | 707, 833, 928, 1153 |
| AsuII | TTCGAA | 1 cut(s) | 755 |
| AvaII | GGWCC | 2 cut(s) | 374, 1046 |
| BamHI | GGATCC | 1 cut(s) | 342 |
| BanI | GGYRCC | 1 cut(s) | 189 |
| BauI | CACGAG | 1 cut(s) | 675 |
| BbsI | GAAGAC | 1 cut(s) | 1248 |
| BbvI | GCAGC | 2 cut(s) | 655, 1127 |
| BccI | CCATC | 5 cut(s) | 80, 111, 191, 674, 857 |
| BceAI | ACGGC | 1 cut(s) | 1141 |
| BciT130I | CCWGG | 1 cut(s) | 633 |
| BclI | TGATCA | 1 cut(s) | 1143 |
| BcnI | CCSGG | 2 cut(s) | 235, 739 |
| BcoDI | GTCTC | 3 cut(s) | 161, 897, 913 |
| BfaI | CTAG | 2 cut(s) | 383, 521 |
| BfmI | CTRYAG | 1 cut(s) | 1230 |
| BfrI | CTTAAG | 1 cut(s) | 503 |
| BfuAI | ACCTGC | 1 cut(s) | 1034 |
| BisI | GCNGC | 3 cut(s) | 327, 669, 1116 |
| BlsI | GCNGC | 3 cut(s) | 328, 670, 1117 |
| Bme1390I | CCNGG | 3 cut(s) | 235, 633, 739 |
| Bme18I | GGWCC | 2 cut(s) | 374, 1046 |
| BmgT120I | GGNCC | 3 cut(s) | 374, 740, 1046 |
| BmiI | GGNNCC | 2 cut(s) | 191, 344 |
| BmrFI | CCNGG | 3 cut(s) | 235, 633, 739 |
| BpiI | GAAGAC | 1 cut(s) | 1248 |
| Bpu10I | CCTNAGC | 1 cut(s) | 419 |
| Bpu14I | TTCGAA | 1 cut(s) | 755 |
| BpuMI | CCSGG | 2 cut(s) | 235, 739 |
| BsaBI | GATNNNNATC | 2 cut(s) | 462, 495 |
| BsaI | GGTCTC | 1 cut(s) | 913 |
| BsaJI | CCNNGG | 3 cut(s) | 337, 923, 1282 |
| BsaWI | WCCGGW | 2 cut(s) | 847, 934 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 38, 68, 1062, 1092 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 437 |
| Bse118I | RCCGGY | 1 cut(s) | 1162 |
| Bse8I | GATNNNNATC | 2 cut(s) | 462, 495 |
| BseAI | TCCGGA | 1 cut(s) | 934 |
| BseBI | CCWGG | 1 cut(s) | 633 |
| BseDI | CCNNGG | 3 cut(s) | 337, 923, 1282 |
| BseJI | GATNNNNATC | 2 cut(s) | 462, 495 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 437 |
| BseMII | CTCAG | 2 cut(s) | 714, 1037 |
| BseRI | GAGGAG | 1 cut(s) | 1227 |
| BseXI | GCAGC | 2 cut(s) | 655, 1127 |
| BshFI | GGCC | 1 cut(s) | 742 |
| BshNI | GGYRCC | 1 cut(s) | 189 |
| BsiSI | CCGG | 5 cut(s) | 234, 738, 848, 935, 1163 |
| BslFI | GGGAC | 1 cut(s) | 880 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 437 |
| BsmAI | GTCTC | 3 cut(s) | 161, 897, 913 |
| BsmFI | GGGAC | 1 cut(s) | 880 |
| BsnI | GGCC | 1 cut(s) | 742 |
| Bso31I | GGTCTC | 1 cut(s) | 913 |
| Bsp119I | TTCGAA | 1 cut(s) | 755 |
| Bsp13I | TCCGGA | 1 cut(s) | 934 |
| Bsp1407I | TGTACA | 1 cut(s) | 616 |
| BspACI | CCGC | 2 cut(s) | 326, 1139 |
| BspANI | GGCC | 1 cut(s) | 742 |
| BspCNI | CTCAG | 2 cut(s) | 715, 1036 |
| BspEI | TCCGGA | 1 cut(s) | 934 |
| BspLI | GGNNCC | 2 cut(s) | 191, 344 |
| BspMI | ACCTGC | 1 cut(s) | 1034 |
| BspPI | GGATC | 5 cut(s) | 87, 337, 350, 458, 1271 |
| BspT104I | TTCGAA | 1 cut(s) | 755 |
| BspT107I | GGYRCC | 1 cut(s) | 189 |
| BspTI | CTTAAG | 1 cut(s) | 503 |
| BspTNI | GGTCTC | 1 cut(s) | 913 |
| BsrFI | RCCGGY | 1 cut(s) | 1162 |
| BsrGI | TGTACA | 1 cut(s) | 616 |
| BssAI | RCCGGY | 1 cut(s) | 1162 |
| BssECI | CCNNGG | 3 cut(s) | 337, 923, 1282 |
| BssSI | CACGAG | 1 cut(s) | 675 |
| BssT1I | CCWWGG | 2 cut(s) | 337, 1282 |
| Bst2BI | CACGAG | 1 cut(s) | 675 |
| Bst2UI | CCWGG | 1 cut(s) | 633 |
| Bst4CI | ACNGT | 3 cut(s) | 719, 995, 1175 |
| Bst6I | CTCTTC | 1 cut(s) | 782 |
| BstAFI | CTTAAG | 1 cut(s) | 503 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1061 |
| BstAUI | TGTACA | 1 cut(s) | 616 |
| BstBI | TTCGAA | 1 cut(s) | 755 |
| BstDEI | CTNAG | 6 cut(s) | 387, 419, 723, 912, 1023, 1313 |
| BstMAI | GTCTC | 3 cut(s) | 161, 897, 913 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1061, 1070, 1079 |
| BstNI | CCWGG | 1 cut(s) | 633 |
| BstSCI | CCNGG | 3 cut(s) | 233, 631, 737 |
| BstSFI | CTRYAG | 1 cut(s) | 1230 |
| BstV1I | GCAGC | 2 cut(s) | 655, 1127 |
| BstV2I | GAAGAC | 1 cut(s) | 1248 |
| BstX2I | RGATCY | 1 cut(s) | 342 |
| BstYI | RGATCY | 1 cut(s) | 342 |
| BsuRI | GGCC | 1 cut(s) | 742 |
| BtsI | GCAGTG | 1 cut(s) | 1071 |
| BtsIMutI | CAGTG | 1 cut(s) | 1071 |
| BveI | ACCTGC | 1 cut(s) | 1034 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1049 |
| Cfr10I | RCCGGY | 1 cut(s) | 1162 |
| Cfr13I | GGNCC | 3 cut(s) | 374, 740, 1046 |
| CseI | GACGC | 1 cut(s) | 755 |
| Csp6I | GTAC | 3 cut(s) | 190, 617, 720 |
| CviAII | CATG | 3 cut(s) | 305, 347, 1267 |
| CviQI | GTAC | 3 cut(s) | 190, 617, 720 |
| DdeI | CTNAG | 6 cut(s) | 387, 419, 723, 912, 1023, 1313 |
| DraI | TTTAAA | 1 cut(s) | 999 |
| Eam1104I | CTCTTC | 1 cut(s) | 782 |
| EarI | CTCTTC | 1 cut(s) | 782 |
| Eco130I | CCWWGG | 2 cut(s) | 337, 1282 |
| Eco31I | GGTCTC | 1 cut(s) | 913 |
| Eco47I | GGWCC | 2 cut(s) | 374, 1046 |
| Eco57I | CTGAAG | 2 cut(s) | 669, 1242 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1046 |
| EcoRII | CCWGG | 1 cut(s) | 631 |
| EcoT14I | CCWWGG | 2 cut(s) | 337, 1282 |
| ErhI | CCWWGG | 2 cut(s) | 337, 1282 |
| FaeI | CATG | 3 cut(s) | 308, 350, 1270 |
| FaiI | YATR | 6 cut(s) | 306, 348, 576, 581, 968, 1268 |
| FaqI | GGGAC | 1 cut(s) | 880 |
| FatI | CATG | 3 cut(s) | 304, 346, 1266 |
| FbaI | TGATCA | 1 cut(s) | 1143 |
| Fnu4HI | GCNGC | 3 cut(s) | 327, 669, 1116 |
| Fsp4HI | GCNGC | 3 cut(s) | 327, 669, 1116 |
| FspBI | CTAG | 2 cut(s) | 383, 521 |
| GluI | GCNGC | 3 cut(s) | 327, 669, 1116 |
| HaeIII | GGCC | 1 cut(s) | 742 |
| HapII | CCGG | 5 cut(s) | 234, 738, 848, 935, 1163 |
| HgaI | GACGC | 1 cut(s) | 755 |
| Hin1II | CATG | 3 cut(s) | 308, 350, 1270 |
| HincII | GTYRAC | 1 cut(s) | 766 |
| HindII | GTYRAC | 1 cut(s) | 766 |
| HindIII | AAGCTT | 2 cut(s) | 250, 1223 |
| HinfI | GANTC | 8 cut(s) | 168, 257, 308, 379, 478, 496, 807, 906 |
| HpaII | CCGG | 5 cut(s) | 234, 738, 848, 935, 1163 |
| HphI | GGTGA | 4 cut(s) | 707, 833, 928, 1153 |
| Hpy166II | GTNNAC | 4 cut(s) | 135, 611, 715, 766 |
| Hpy188I | TCNGA | 3 cut(s) | 179, 378, 1026 |
| Hpy188III | TCNNGA | 8 cut(s) | 222, 266, 467, 521, 647, 677, 935, 1169 |
| Hpy8I | GTNNAC | 4 cut(s) | 135, 611, 715, 766 |
| Hpy99I | CGWCG | 3 cut(s) | 93, 302, 1100 |
| HpyAV | CCTTC | 1 cut(s) | 951 |
| HpyCH4III | ACNGT | 3 cut(s) | 719, 995, 1175 |
| HpyCH4IV | ACGT | 1 cut(s) | 941 |
| HpyCH4V | TGCA | 1 cut(s) | 1064 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1061, 1070, 1079 |
| HpyF3I | CTNAG | 6 cut(s) | 387, 419, 723, 912, 1023, 1313 |
| HpySE526I | ACGT | 1 cut(s) | 941 |
| Hsp92II | CATG | 3 cut(s) | 308, 350, 1270 |
| Kpn2I | TCCGGA | 1 cut(s) | 934 |
| KpnI | GGTACC | 1 cut(s) | 193 |
| Ksp22I | TGATCA | 1 cut(s) | 1143 |
| LmnI | GCTCC | 1 cut(s) | 1070 |
| Lsp1109I | GCAGC | 2 cut(s) | 655, 1127 |
| MaeI | CTAG | 2 cut(s) | 383, 521 |
| MaeII | ACGT | 1 cut(s) | 941 |
| MaeIII | GTNAC | 2 cut(s) | 841, 1158 |
| MfeI | CAATTG | 2 cut(s) | 363, 531 |
| MflI | RGATCY | 1 cut(s) | 342 |
| MluCI | AATT | 8 cut(s) | 58, 356, 363, 531, 549, 702, 1056, 1109 |
| MlyI | GAGTC | 1 cut(s) | 177 |
| MmeI | TCCRAC | 2 cut(s) | 171, 1179 |
| MnlI | CCTC | 9 cut(s) | 54, 62, 96, 180, 809, 918, 1205, 1208, 1228 |
| MroI | TCCGGA | 1 cut(s) | 934 |
| MroXI | GAANNNNTTC | 2 cut(s) | 261, 627 |
| MseI | TTAA | 7 cut(s) | 8, 504, 654, 774, 998, 1014, 1302 |
| MslI | CAYNNNNRTG | 2 cut(s) | 914, 1271 |
| MspA1I | CMGCKG | 1 cut(s) | 545 |
| MspCI | CTTAAG | 1 cut(s) | 503 |
| MspI | CCGG | 5 cut(s) | 234, 738, 848, 935, 1163 |
| MspR9I | CCNGG | 3 cut(s) | 235, 633, 739 |
| MunI | CAATTG | 2 cut(s) | 363, 531 |
| MvaI | CCWGG | 1 cut(s) | 633 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1061, 1070, 1079 |
| NciI | CCSGG | 2 cut(s) | 235, 739 |
| NlaIII | CATG | 3 cut(s) | 308, 350, 1270 |
| NlaIV | GGNNCC | 2 cut(s) | 191, 344 |
| NspV | TTCGAA | 1 cut(s) | 755 |
| OliI | CACNNNNGTG | 1 cut(s) | 914 |
| PdmI | GAANNNNTTC | 2 cut(s) | 261, 627 |
| PfeI | GAWTC | 7 cut(s) | 257, 308, 379, 478, 496, 807, 906 |
| PfoI | TCCNGGA | 1 cut(s) | 233 |
| PkrI | GCNGC | 3 cut(s) | 328, 670, 1117 |
| PleI | GAGTC | 1 cut(s) | 176 |
| PpsI | GAGTC | 1 cut(s) | 176 |
| PpuMI | RGGWCCY | 1 cut(s) | 1046 |
| Psp1406I | AACGTT | 1 cut(s) | 941 |
| Psp5II | RGGWCCY | 1 cut(s) | 1046 |
| Psp6I | CCWGG | 1 cut(s) | 631 |
| PspGI | CCWGG | 1 cut(s) | 631 |
| PspN4I | GGNNCC | 2 cut(s) | 191, 344 |
| PspPI | GGNCC | 3 cut(s) | 374, 740, 1046 |
| PspPPI | RGGWCCY | 1 cut(s) | 1046 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1049 |
| PsuI | RGATCY | 1 cut(s) | 342 |
| PvuII | CAGCTG | 1 cut(s) | 545 |
| RsaI | GTAC | 3 cut(s) | 191, 618, 721 |
| RsaNI | GTAC | 3 cut(s) | 190, 617, 720 |
| RseI | CAYNNNNRTG | 2 cut(s) | 914, 1271 |
| SaqAI | TTAA | 7 cut(s) | 8, 504, 654, 774, 998, 1014, 1302 |
| SatI | GCNGC | 3 cut(s) | 327, 669, 1116 |
| Sau96I | GGNCC | 3 cut(s) | 374, 740, 1046 |
| SchI | GAGTC | 1 cut(s) | 177 |
| ScrFI | CCNGG | 3 cut(s) | 235, 633, 739 |
| SfcI | CTRYAG | 1 cut(s) | 1230 |
| SfuI | TTCGAA | 1 cut(s) | 755 |
| SinI | GGWCC | 2 cut(s) | 374, 1046 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 914, 1271 |
| SmlI | CTYRAG | 1 cut(s) | 503 |
| SmoI | CTYRAG | 1 cut(s) | 503 |
| Sse9I | AATT | 8 cut(s) | 58, 356, 363, 531, 549, 702, 1056, 1109 |
| SsiI | CCGC | 2 cut(s) | 326, 1139 |
| SspMI | CTAG | 2 cut(s) | 383, 521 |
| StyD4I | CCNGG | 3 cut(s) | 233, 631, 737 |
| StyI | CCWWGG | 2 cut(s) | 337, 1282 |
| TaaI | ACNGT | 3 cut(s) | 719, 995, 1175 |
| TaiI | ACGT | 1 cut(s) | 944 |
| TaqI | TCGA | 7 cut(s) | 37, 88, 393, 755, 810, 831, 1095 |
| TaqII | GACCGA | 1 cut(s) | 937 |
| TasI | AATT | 8 cut(s) | 58, 356, 363, 531, 549, 702, 1056, 1109 |
| TatI | WGTACW | 1 cut(s) | 616 |
| TauI | GCSGC | 1 cut(s) | 329 |
| TfiI | GAWTC | 7 cut(s) | 257, 308, 379, 478, 496, 807, 906 |
| Tru1I | TTAA | 7 cut(s) | 8, 504, 654, 774, 998, 1014, 1302 |
| Tru9I | TTAA | 7 cut(s) | 8, 504, 654, 774, 998, 1014, 1302 |
| TscAI | CASTG | 1 cut(s) | 1071 |
| TseI | GCWGC | 2 cut(s) | 668, 1115 |
| TspDTI | ATGAA | 2 cut(s) | 321, 1315 |
| TspRI | CASTG | 1 cut(s) | 1071 |
| Vha464I | CTTAAG | 1 cut(s) | 503 |
| VpaK11BI | GGWCC | 2 cut(s) | 374, 1046 |
| XapI | RAATTY | 1 cut(s) | 356 |
| XbaI | TCTAGA | 1 cut(s) | 520 |
| XmnI | GAANNNNTTC | 2 cut(s) | 261, 627 |
| XspI | CTAG | 2 cut(s) | 383, 521 |