AT2G33385

Functions as actin-binding component of the Arp2 3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
14147382 .. 14149902
2521 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G33385.2

Sequence Viewer

Length: 1098 bp
ATGGCATATCTCGAAAGAGCCTCTCCAACGTTGAAAGAAACACTCCTCAAGATATACCGTGCTGAAAAACCTATTGAGGTCGATCAACATTTCCATGAGTTTGGTTCGATTGAATACCATATCAAGTACTCGGTTTCGGATCCAAATATTGTGCATGTATCGACGTCGACGTTGCTTGAGACACAAGGAGCAGTGACATTGAAGGAGATTTCAAGTTACACTTATGAGGTGATTAAGAATATTGGAGTTGGTGTGATTGACATCGTTGATCCACCAAGATTAGGGTTTCAATTGACCCTTGGCCTAAACCTTGATAATATACCACGTGGCAAAGAAGCGATTAAAATCATTACAAGGATTTCTGAACTACAAGCGATAATATTAAGTAGCCAACTAAAAGAGATGCTGAGAAGTTTAAATTTTCAAGATGATTCACGATCGATCAACAACATGCCCATCAGGATTGTTTATCACCCAAGTGAACCTTTCTACGTCTTTAAACAGCCGGAAAAAATCACGGCCGTGTTTCCGATGAATTTTAAAGACAATTCGGATGTGGTCATCGCCACGTCATTCTTCCAGGATATGGGAAAAGCCCCACAATGTAGTTGGTCGCCAATTCCTCCTCTCCAACTTAGAGGAGAACCGGTTCAAGACTTGACCACCAATTCTGGTTTTGTATCATTTGATATTACTTCACGGCACATTGAAGGAAAGAGACTGGACAAAACGGTTTGGAACTTGCTAAATTTCTACGCATGCGCTAAGTACCATATTAAGTGCTCGAGAGGGTACATACAGAGACGGATGAGAAAAAGAATGGAAACTTTAGTTAAGCTGCTAAATAACACAAGCCTAGAAGAAGAAGCTGCTCAAAATGAAAACGGAAGATGCAAATACGTAAAGGAGTTTGTGAAGGTACCAAAAGGTAAATTGATGATGAAACAAAGATGCAAGGAGATGACAAGGAGAGTGAAGATAAGCAAGTTCCGGATCAAAATCAACGGTTGTGCTCGGTTTCGATTCAATCAGCGGTGGATATCTCTCCCCAAATTCTCTTCGAAACCATCAGATAAATCATACACAAAATTGGACTAA

Protein Analysis

365

Amino Acids

42.2

Weight (kDa)

9.6

Isoelectric Point (pI)

44.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
P34-Arc PF04045 91 - 296 1.9e-35 Arp2/3 complex, 34 kD subunit p34-Arc
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 167
Acc65I GGTACC 1 cut(s) 919
AccB1I GGYRCC 1 cut(s) 919
AccB7I CCANNNNNTGG 1 cut(s) 586
AccI GTMKAC 1 cut(s) 167
AccIII TCCGGA 1 cut(s) 990
AciI CCGC 1 cut(s) 1033
AclI AACGTT 1 cut(s) 29
AclWI GGATC 4 cut(s) 134, 147, 263, 1001
AcoI YGGCCR 1 cut(s) 519
AcsI RAATTY 4 cut(s) 418, 535, 748, 1052
AcvI CACGTG 1 cut(s) 326
AcyI GRCGYC 1 cut(s) 164
AfaI GTAC 4 cut(s) 128, 770, 794, 921
AfiI CCNNNNNNNGG 2 cut(s) 281, 586
AgeI ACCGGT 1 cut(s) 646
AgsI TTSAA 9 cut(s) 34, 113, 202, 213, 290, 425, 653, 710, 1027
AjiI CACGTC 1 cut(s) 570
AjnI CCWGG 1 cut(s) 579
AleI CACNNNNGTG 2 cut(s) 477, 521
AloI GAACNNNNNNTCC 2 cut(s) 633, 665
AluBI AGCT 2 cut(s) 838, 869
AluI AGCT 2 cut(s) 838, 869
Alw21I GWGCWC 2 cut(s) 785, 1015
Alw26I GTCTC 3 cut(s) 173, 712, 796
AlwI GGATC 4 cut(s) 134, 147, 263, 1001
Ama87I CYCGRG 1 cut(s) 784
Aor13HI TCCGGA 1 cut(s) 990
AoxI GGCC 2 cut(s) 301, 519
ApeKI GCWGC 2 cut(s) 838, 869
ApoI RAATTY 4 cut(s) 418, 535, 748, 1052
AsiGI ACCGGT 1 cut(s) 646
Asp700I GAANNNNTTC 1 cut(s) 648
Asp718I GGTACC 1 cut(s) 919
AspLEI GCGC 1 cut(s) 764
AsuHPI GGTGA 2 cut(s) 241, 464
AsuII TTCGAA 1 cut(s) 1061
AvaI CYCGRG 1 cut(s) 784
BamHI GGATCC 1 cut(s) 139
BanI GGYRCC 1 cut(s) 919
BbrPI CACGTG 1 cut(s) 326
Bbv12I GWGCWC 2 cut(s) 785, 1015
BbvI GCAGC 2 cut(s) 825, 856
BccI CCATC 2 cut(s) 464, 1075
BceAI ACGGC 3 cut(s) 506, 534, 716
BciT130I CCWGG 1 cut(s) 581
BcoDI GTCTC 3 cut(s) 173, 712, 796
BfaI CTAG 1 cut(s) 857
BisI GCNGC 2 cut(s) 839, 870
BlsI GCNGC 2 cut(s) 840, 871
BmcAI AGTACT 1 cut(s) 128
Bme1390I CCNGG 1 cut(s) 581
BmeT110I CYCGRG 1 cut(s) 784
BmgBI CACGTC 1 cut(s) 570
BmiI GGNNCC 2 cut(s) 141, 921
BmrFI CCNGG 1 cut(s) 581
BmsI GCATC 3 cut(s) 393, 881, 941
Bpu14I TTCGAA 1 cut(s) 1061
BpuEI CTTGAG 2 cut(s) 32, 197
Bsa29I ATCGAT 1 cut(s) 440
BsaAI YACGTR 2 cut(s) 326, 901
BsaBI GATNNNNATC 3 cut(s) 260, 344, 998
BsaHI GRCGYC 1 cut(s) 164
BsaJI CCNNGG 1 cut(s) 298
BsaWI WCCGGW 2 cut(s) 646, 990
BsaXI ACNNNNNCTCC 4 cut(s) 237, 267, 633, 663
Bsc4I CCNNNNNNNGG 2 cut(s) 281, 586
Bse118I RCCGGY 1 cut(s) 646
Bse1I ACTGG 1 cut(s) 726
Bse8I GATNNNNATC 3 cut(s) 260, 344, 998
BseAI TCCGGA 1 cut(s) 990
BseBI CCWGG 1 cut(s) 581
BseCI ATCGAT 1 cut(s) 440
BseDI CCNNGG 1 cut(s) 298
BseGI GGATG 2 cut(s) 559, 813
BseJI GATNNNNATC 3 cut(s) 260, 344, 998
BseLI CCNNNNNNNGG 2 cut(s) 281, 586
BseMII CTCAG 1 cut(s) 398
BseNI ACTGG 1 cut(s) 726
BseRI GAGGAG 3 cut(s) 35, 615, 654
BseX3I CGGCCG 1 cut(s) 519
BseXI GCAGC 2 cut(s) 825, 856
Bsh1285I CGRYCG 2 cut(s) 440, 522
BshFI GGCC 2 cut(s) 303, 521
BshNI GGYRCC 1 cut(s) 919
BshTI ACCGGT 1 cut(s) 646
BshVI ATCGAT 1 cut(s) 440
BsiEI CGRYCG 2 cut(s) 440, 522
BsiHKAI GWGCWC 2 cut(s) 785, 1015
BsiHKCI CYCGRG 1 cut(s) 784
BsiSI CCGG 3 cut(s) 506, 647, 991
BslI CCNNNNNNNGG 2 cut(s) 281, 586
BsmAI GTCTC 3 cut(s) 173, 712, 796
BsmBI CGTCTC 1 cut(s) 796
BsnI GGCC 2 cut(s) 303, 521
BsoBI CYCGRG 1 cut(s) 784
Bsp119I TTCGAA 1 cut(s) 1061
Bsp1286I GDGCHC 2 cut(s) 785, 1015
Bsp13I TCCGGA 1 cut(s) 990
Bsp143I GATC 6 cut(s) 82, 139, 268, 437, 441, 993
BspACI CCGC 1 cut(s) 1033
BspANI GGCC 2 cut(s) 303, 521
BspCNI CTCAG 1 cut(s) 399
BspDI ATCGAT 1 cut(s) 440
BspEI TCCGGA 1 cut(s) 990
BspLI GGNNCC 2 cut(s) 141, 921
BspPI GGATC 4 cut(s) 134, 147, 263, 1001
BspT104I TTCGAA 1 cut(s) 1061
BspT107I GGYRCC 1 cut(s) 919
BsrFI RCCGGY 1 cut(s) 646
BsrI ACTGG 1 cut(s) 726
BssAI RCCGGY 1 cut(s) 646
BssECI CCNNGG 1 cut(s) 298
BssMI GATC 6 cut(s) 82, 139, 268, 437, 441, 993
BssNI GRCGYC 1 cut(s) 164
BssT1I CCWWGG 1 cut(s) 298
Bst2UI CCWGG 1 cut(s) 581
Bst4CI ACNGT 3 cut(s) 59, 733, 1007
Bst6I CTCTTC 1 cut(s) 1063
BstACI GRCGYC 1 cut(s) 164
BstBAI YACGTR 2 cut(s) 326, 901
BstBI TTCGAA 1 cut(s) 1061
BstC8I GCNNGC 1 cut(s) 760
BstDEI CTNAG 3 cut(s) 407, 635, 765
BstF5I GGATG 2 cut(s) 559, 813
BstHHI GCGC 1 cut(s) 764
BstKTI GATC 6 cut(s) 85, 142, 271, 440, 444, 996
BstMAI GTCTC 3 cut(s) 173, 712, 796
BstMBI GATC 6 cut(s) 82, 139, 268, 437, 441, 993
BstMCI CGRYCG 2 cut(s) 440, 522
BstNI CCWGG 1 cut(s) 581
BstNSI RCATGY 3 cut(s) 158, 454, 762
BstSCI CCNGG 1 cut(s) 579
BstSNI TACGTA 1 cut(s) 901
BstV1I GCAGC 2 cut(s) 825, 856
BstX2I RGATCY 1 cut(s) 139
BstXI CCANNNNNNTGG 1 cut(s) 101
BstYI RGATCY 1 cut(s) 139
BstZI CGGCCG 1 cut(s) 519
Bsu15I ATCGAT 1 cut(s) 440
BsuRI GGCC 2 cut(s) 303, 521
BsuTUI ATCGAT 1 cut(s) 440
BtgZI GCGATG 1 cut(s) 547
BtrI CACGTC 1 cut(s) 570
BtsCI GGATG 2 cut(s) 559, 813
BtsI GCAGTG 1 cut(s) 198
BtsIMutI CAGTG 1 cut(s) 198
Cac8I GCNNGC 1 cut(s) 760
CfoI GCGC 1 cut(s) 764
Cfr10I RCCGGY 1 cut(s) 646
ClaI ATCGAT 1 cut(s) 440
Csp6I GTAC 4 cut(s) 127, 769, 793, 920
CspAI ACCGGT 1 cut(s) 646
CviAII CATG 4 cut(s) 95, 155, 451, 759
CviJI RGCY 9 cut(s) 20, 303, 390, 505, 521, 596, 838, 855, 869
CviKI_1 RGCY 9 cut(s) 20, 303, 390, 505, 521, 596, 838, 855, 869
CviQI GTAC 4 cut(s) 127, 769, 793, 920
DdeI CTNAG 3 cut(s) 407, 635, 765
DpnI GATC 6 cut(s) 84, 141, 270, 439, 443, 995
DpnII GATC 6 cut(s) 82, 139, 268, 437, 441, 993
DraI TTTAAA 3 cut(s) 417, 499, 541
EaeI YGGCCR 1 cut(s) 519
EagI CGGCCG 1 cut(s) 519
Eam1104I CTCTTC 1 cut(s) 1063
EarI CTCTTC 1 cut(s) 1063
EclXI CGGCCG 1 cut(s) 519
Eco105I TACGTA 1 cut(s) 901
Eco130I CCWWGG 1 cut(s) 298
Eco32I GATATC 1 cut(s) 1041
Eco52I CGGCCG 1 cut(s) 519
Eco72I CACGTG 1 cut(s) 326
Eco88I CYCGRG 1 cut(s) 784
EcoRII CCWGG 1 cut(s) 579
EcoRV GATATC 1 cut(s) 1041
EcoT14I CCWWGG 1 cut(s) 298
ErhI CCWWGG 1 cut(s) 298
Esp3I CGTCTC 1 cut(s) 796
FaeI CATG 4 cut(s) 98, 158, 454, 762
FalI AAGNNNNNCTT 4 cut(s) 205, 237, 469, 501
FatI CATG 4 cut(s) 94, 154, 450, 758
FblI GTMKAC 1 cut(s) 167
Fnu4HI GCNGC 2 cut(s) 839, 870
FokI GGATG 2 cut(s) 566, 820
Fsp4HI GCNGC 2 cut(s) 839, 870
FspBI CTAG 1 cut(s) 857
GlaI GCGC 1 cut(s) 763
GluI GCNGC 2 cut(s) 839, 870
HaeIII GGCC 2 cut(s) 303, 521
HapII CCGG 3 cut(s) 506, 647, 991
HhaI GCGC 1 cut(s) 764
Hin1I GRCGYC 1 cut(s) 164
Hin1II CATG 4 cut(s) 98, 158, 454, 762
Hin6I GCGC 1 cut(s) 762
HinP1I GCGC 1 cut(s) 762
HincII GTYRAC 1 cut(s) 168
HindII GTYRAC 1 cut(s) 168
HinfI GANTC 2 cut(s) 431, 1023
HpaII CCGG 3 cut(s) 506, 647, 991
HphI GGTGA 2 cut(s) 241, 464
Hpy166II GTNNAC 2 cut(s) 168, 482
Hpy188I TCNGA 5 cut(s) 139, 364, 531, 553, 1072
Hpy188III TCNNGA 8 cut(s) 11, 49, 425, 435, 460, 653, 786, 991
Hpy8I GTNNAC 2 cut(s) 168, 482
Hpy99I CGWCG 3 cut(s) 166, 169, 172
HpyAV CCTTC 3 cut(s) 196, 704, 910
HpyCH4III ACNGT 3 cut(s) 59, 733, 1007
HpyCH4IV ACGT 7 cut(s) 29, 164, 170, 325, 492, 569, 900
HpyCH4V TGCA 3 cut(s) 154, 894, 954
HpyF3I CTNAG 3 cut(s) 407, 635, 765
HpySE526I ACGT 7 cut(s) 29, 164, 170, 325, 492, 569, 900
Hsp92I GRCGYC 1 cut(s) 164
Hsp92II CATG 4 cut(s) 98, 158, 454, 762
HspAI GCGC 1 cut(s) 762
Kpn2I TCCGGA 1 cut(s) 990
KpnI GGTACC 1 cut(s) 923
Kzo9I GATC 6 cut(s) 82, 139, 268, 437, 441, 993
LmnI GCTCC 1 cut(s) 188
LpnPI CCDG 8 cut(s) 445, 519, 566, 593, 657, 660, 707, 1004
Lsp1109I GCAGC 2 cut(s) 825, 856
LweI GCATC 3 cut(s) 393, 881, 941
MaeI CTAG 1 cut(s) 857
MaeII ACGT 7 cut(s) 29, 164, 170, 325, 492, 569, 900
MaeIII GTNAC 2 cut(s) 193, 215
MalI GATC 6 cut(s) 84, 141, 270, 439, 443, 995
MboI GATC 6 cut(s) 82, 139, 268, 437, 441, 993
MboII GAAGA 6 cut(s) 568, 872, 875, 900, 988, 1050
MfeI CAATTG 1 cut(s) 290
MflI RGATCY 1 cut(s) 139
MhlI GDGCHC 2 cut(s) 785, 1015
MmeI TCCRAC 2 cut(s) 50, 655
MnlI CCTC 8 cut(s) 31, 56, 70, 220, 632, 633, 636, 782
MroI TCCGGA 1 cut(s) 990
MroXI GAANNNNTTC 1 cut(s) 648
MseI TTAA 8 cut(s) 234, 342, 383, 416, 498, 540, 777, 834
MslI CAYNNNNRTG 3 cut(s) 93, 477, 521
MspA1I CMGCKG 1 cut(s) 1033
MspI CCGG 3 cut(s) 506, 647, 991
MspR9I CCNGG 1 cut(s) 581
MunI CAATTG 1 cut(s) 290
MvaI CCWGG 1 cut(s) 581
NdeII GATC 6 cut(s) 82, 139, 268, 437, 441, 993
NlaIII CATG 4 cut(s) 98, 158, 454, 762
NlaIV GGNNCC 2 cut(s) 141, 921
NmuCI GTSAC 1 cut(s) 193
NspI RCATGY 3 cut(s) 158, 454, 762
NspV TTCGAA 1 cut(s) 1061
OliI CACNNNNGTG 2 cut(s) 477, 521
PaeI GCATGC 1 cut(s) 762
PaeR7I CTCGAG 1 cut(s) 784
PcsI WCGNNNNNNNCGW 1 cut(s) 167
PdmI GAANNNNTTC 1 cut(s) 648
PfeI GAWTC 2 cut(s) 431, 1023
PflMI CCANNNNNTGG 1 cut(s) 586
PfoI TCCNGGA 1 cut(s) 579
PinAI ACCGGT 1 cut(s) 646
PkrI GCNGC 2 cut(s) 840, 871
Ple19I CGATCG 1 cut(s) 440
PmaCI CACGTG 1 cut(s) 326
PmlI CACGTG 1 cut(s) 326
Ppu21I YACGTR 2 cut(s) 326, 901
Psp1406I AACGTT 1 cut(s) 29
Psp6I CCWGG 1 cut(s) 579
PspCI CACGTG 1 cut(s) 326
PspGI CCWGG 1 cut(s) 579
PspN4I GGNNCC 2 cut(s) 141, 921
PsuI RGATCY 1 cut(s) 139
PvuI CGATCG 1 cut(s) 440
RsaI GTAC 4 cut(s) 128, 770, 794, 921
RsaNI GTAC 4 cut(s) 127, 769, 793, 920
RseI CAYNNNNRTG 3 cut(s) 93, 477, 521
SalI GTCGAC 1 cut(s) 166
SaqAI TTAA 8 cut(s) 234, 342, 383, 416, 498, 540, 777, 834
SatI GCNGC 2 cut(s) 839, 870
Sau3AI GATC 6 cut(s) 82, 139, 268, 437, 441, 993
ScaI AGTACT 1 cut(s) 128
ScrFI CCNGG 1 cut(s) 581
SduI GDGCHC 2 cut(s) 785, 1015
SfaNI GCATC 3 cut(s) 393, 881, 941
Sfr274I CTCGAG 1 cut(s) 784
SfuI TTCGAA 1 cut(s) 1061
SgrDI CGTCGACG 1 cut(s) 166
SlaI CTCGAG 1 cut(s) 784
SmiMI CAYNNNNRTG 3 cut(s) 93, 477, 521
SmlI CTYRAG 3 cut(s) 47, 176, 784
SmoI CTYRAG 3 cut(s) 47, 176, 784
SnaBI TACGTA 1 cut(s) 901
SphI GCATGC 1 cut(s) 762
SsiI CCGC 1 cut(s) 1033
SspI AATATT 3 cut(s) 148, 241, 381
SspMI CTAG 1 cut(s) 857
StyD4I CCNGG 1 cut(s) 579
StyI CCWWGG 1 cut(s) 298
TaaI ACNGT 3 cut(s) 59, 733, 1007
TaiI ACGT 7 cut(s) 32, 167, 173, 328, 495, 572, 903
TaqI TCGA 9 cut(s) 12, 81, 107, 161, 167, 440, 785, 1021, 1061
TatI WGTACW 1 cut(s) 126
TfiI GAWTC 2 cut(s) 431, 1023
Tru1I TTAA 8 cut(s) 234, 342, 383, 416, 498, 540, 777, 834
Tru9I TTAA 8 cut(s) 234, 342, 383, 416, 498, 540, 777, 834
TscAI CASTG 1 cut(s) 198
TseFI GTSAC 1 cut(s) 193
TseI GCWGC 2 cut(s) 838, 869
Tsp45I GTSAC 1 cut(s) 193
TspDTI ATGAA 3 cut(s) 548, 894, 956
TspGWI ACGGA 2 cut(s) 820, 900
TspRI CASTG 1 cut(s) 198
Van91I CCANNNNNTGG 1 cut(s) 586
XapI RAATTY 4 cut(s) 418, 535, 748, 1052
XceI RCATGY 3 cut(s) 158, 454, 762
XcmI CCANNNNNNNNNTGG 1 cut(s) 606
XhoI CTCGAG 1 cut(s) 784
XmiI GTMKAC 1 cut(s) 167
XmnI GAANNNNTTC 1 cut(s) 648
XspI CTAG 1 cut(s) 857
ZraI GACGTC 1 cut(s) 165
ZrmI AGTACT 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.