Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006667

Physical Location & Seq

Genomic Coordinates Forward (+)

14427509 .. 14430860

Gene Structure 3352 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G34170.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGGCGGAGAAACAACTTAACTTCGATGCACCTCTTCTTTCAACAAGGAGGATGAAAAAATCTGCAATCTCTGTACGCAGAAACATGCCAAAGCAGCTCACTGATGAGTCCAAGACAAGTGAATCTCTTTCTGTTTCAGTTCTTGTCCAAGACATGGGTTTAGATCAGGTTCCGGATTCTCCCTTGGAGAGTAAACATGTAGAAGAAGAAGCAGAAGAGAGTGAAGATGATGATGTTTTCTCTGATGCCCTTGATACATTGTCTCTAAAGCAAAGCATAAGTGGTGGTGGTGGTGTTGAGGCAATGAAACCGTCAATGCCATCTGAGGATCCTCAATTCATGTTGGATCGTTTCTTACCTGCTGCGAAATCCTTGACTCTGGAGCAACCACCTCAATATTCTTGGAAGCGACAGCCATTGCCCCTCATGTCAGAACCAATGAGACAGATTAGAGATATAGTACCAGCAGAGAATCGTGCAACTCCTACAAGGTATGAGTCTAGTTTTACTCCATCTTATTATCAGGACATAGATGACGAAGAAAGCGAGGAGGATTCAGATGACGATGAAGTTTCTGAGTATCTTTCTAAGAGAGGCTGTGGTATGATGTCTCCACAAATCTGCTTTAAAAACTCACTCGGTATGCTGAGCTCAGTGAATGGTCTTAAAGAGAAACCTTACTCTCTGAGAACCCCAAGCCATGATCAAGTGAAGTCAAGCAAGGTCGCTCAGCTCAAATCTCGGTTCCAATCTGTGAAAAAGCTCGCTCTTGATTATAAGCAAAAGTTGGGAAGTATAGCTCAGTCTCCAGTACACCCAAGTGTTGGGAAGAAGTTTAACTTTGGTTCTGAACAACATGAATCGAAGAGTTCTGCAAGTAGGCCATCATCTCCTTACAGACAAAATGGCTGTATGTCACCGTATCGCAGTGTAGGAAACAGTTCTCCTCTTCACGCTGCGGGTTTCCCTGGGACTCGTAAGGAAGCAGAGGTTATGAGAGCTAACAGGTTGAACAAGCATATCAGAAACATAAGCAAGTCTCACGAATCACTCTATCCAAAAAGTACAAAACAAGACTGTTCAACGAGCTCTGCCATGGAGAAGACATTATATGTTGACTCAGAGAATTCTCCAAGGACCAGCAATGAGAATCGTAGCTCTAATGTCAAGAAATTGCCAGAAACAATTTCAGAGGAACCTGAAATGGAGGGAAAGAAACCGAAAGCCGTTCGCGAGCTTAAGGCTGTAGAAACTCTTAGTATTAGCAGTGGAGTCAAGATGATGAAGGCAGATGAGTTGGGAAAGAACAACAGTGGCTGTGATCTATCTCCACTTGCTCCGCCGCCACCCAAAAAGCCTTCCGAGTCTTGGCTTTTCAGTAATCTGCCGTCAGTAAGCTCAAAGATCCCTTCACCGAGATACCTGTTTCATCCCCAAAAAAAGAATGTTGAAGAAAACTCCACAAGTGTTACCAAGTGGGAAACTATAGTCAAGACTTCTTATACGCACAGAGATCATATACGCTATTCTGAAGAACTCGTTGCTCATTCATCTTGCCAATCAAAAACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF688

Protein Analysis

523

Amino Acids

58.39

Weight (kDa)

7.61

Isoelectric Point (pI)

66.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF688	PF05097	1 - 57	1e-06	Protein of unknown function (DUF688)
DUF688	PF05097	64 - 417	3.9e-112	Protein of unknown function (DUF688)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29240 AT2G34170 AT2G34170 AT2G34170 AT2G34170 AT2G34170 AT2G34170
fragaria_vesca	FvH4_3g07680
malus_domestica	MD05G1299600.v1.1 MD10G1278900.v1.1
prunus_persica	Prupe.4G062300_v2.0.a1 Prupe.4G062300_v2.0.a1
pyrus_communis	pycom05g27780 pycom10g23290
rosa_chinensis	RchiOBHm_Chr5g0010991
rosa_laevigata	RLG00000031801
rosa_multiflora	Rmu_sc0008268.1_g000004
rosa_roxburghii	Rroxscaffold_1G00065400
rosa_rugosa	Rorug04G0454200 Rorug04G0454300
rosa_samantha	Rh5AG086500 Rh5BG081200 Rh5CG093900 Rh5DG081100
rosa_wichuraiana	Rw0G017410 Rw0G017860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	777
Acc36I	ACCTGC	1 cut(s)	367
AccB7I	CCANNNNNTGG	2 cut(s)	154, 824
AccII	CGCG	1 cut(s)	1233
AccIII	TCCGGA	1 cut(s)	172
AciI	CCGC	4 cut(s)	5, 959, 1340, 1343
AclWI	GGATC	4 cut(s)	323, 336, 354, 1399
AcsI	RAATTY	1 cut(s)	1126
AcuI	CTGAAG	1 cut(s)	1551
AfaI	GTAC	4 cut(s)	75, 462, 813, 1066
AfiI	CCNNNNNNNGG	3 cut(s)	154, 824, 1368
AflII	CTTAAG	1 cut(s)	1238
AflIII	ACRYGT	1 cut(s)	196
AgsI	TTSAA	4 cut(s)	42, 1012, 1083, 1451
AjnI	CCWGG	1 cut(s)	967
AleI	CACNNNNGTG	1 cut(s)	819
Alw21I	GWGCWC	2 cut(s)	653, 1091
Alw26I	GTCTC	5 cut(s)	267, 436, 615, 810, 1044
AlwI	GGATC	4 cut(s)	323, 336, 354, 1399
AlwNI	CAGNNNCTG	1 cut(s)	1317
Aor13HI	TCCGGA	1 cut(s)	172
AoxI	GGCC	1 cut(s)	881
ApeKI	GCWGC	3 cut(s)	94, 362, 956
ApoI	RAATTY	1 cut(s)	1126
Asp700I	GAANNNNTTC	1 cut(s)	940
AspS9I	GGNCC	1 cut(s)	1137
AsuHPI	GGTGA	2 cut(s)	909, 1404
AvaII	GGWCC	1 cut(s)	1137
BamHI	GGATCC	1 cut(s)	328
BanII	GRGCYC	2 cut(s)	653, 1091
BbsI	GAAGAC	1 cut(s)	1109
Bbv12I	GWGCWC	2 cut(s)	653, 1091
BbvI	GCAGC	3 cut(s)	106, 349, 943
BccI	CCATC	3 cut(s)	328, 520, 892
BceAI	ACGGC	2 cut(s)	1211, 1372
BciT130I	CCWGG	1 cut(s)	969
BclI	TGATCA	1 cut(s)	703
BcoDI	GTCTC	5 cut(s)	267, 436, 615, 810, 1044
BfaI	CTAG	1 cut(s)	501
BfmI	CTRYAG	2 cut(s)	1245, 1485
BfrI	CTTAAG	1 cut(s)	1238
BfuAI	ACCTGC	1 cut(s)	367
BisI	GCNGC	4 cut(s)	95, 363, 957, 1343
BlpI	GCTNAGC	2 cut(s)	647, 729
BlsI	GCNGC	4 cut(s)	96, 364, 958, 1344
Bme1390I	CCNGG	1 cut(s)	969
Bme18I	GGWCC	1 cut(s)	1137
BmgT120I	GGNCC	1 cut(s)	1137
BmiI	GGNNCC	4 cut(s)	171, 330, 746, 1197
BmrFI	CCNGG	1 cut(s)	969
BmsI	GCATC	2 cut(s)	16, 235
BpiI	GAAGAC	1 cut(s)	1109
BpmI	CTGGAG	2 cut(s)	401, 792
Bpu1102I	GCTNAGC	2 cut(s)	647, 729
BsaJI	CCNNGG	5 cut(s)	183, 967, 968, 1095, 1133
BsaWI	WCCGGW	1 cut(s)	172
Bsc4I	CCNNNNNNNGG	3 cut(s)	154, 824, 1368
Bse1I	ACTGG	1 cut(s)	809
Bse3DI	GCAATG	3 cut(s)	309, 416, 1150
BseAI	TCCGGA	1 cut(s)	172
BseBI	CCWGG	1 cut(s)	969
BseDI	CCNNGG	5 cut(s)	183, 967, 968, 1095, 1133
BseGI	GGATG	2 cut(s)	57, 1429
BseLI	CCNNNNNNNGG	3 cut(s)	154, 824, 1368
BseMI	GCAATG	3 cut(s)	309, 416, 1150
BseMII	CTCAG	8 cut(s)	315, 567, 638, 666, 677, 743, 815, 1134
BseNI	ACTGG	1 cut(s)	809
BseRI	GAGGAG	2 cut(s)	563, 936
BseXI	GCAGC	3 cut(s)	106, 349, 943
Bsh1236I	CGCG	1 cut(s)	1233
BshFI	GGCC	1 cut(s)	883
BsiHKAI	GWGCWC	2 cut(s)	653, 1091
BsiSI	CCGG	1 cut(s)	173
BslFI	GGGAC	1 cut(s)	985
BslI	CCNNNNNNNGG	3 cut(s)	154, 824, 1368
BsmAI	GTCTC	5 cut(s)	267, 436, 615, 810, 1044
BsmFI	GGGAC	1 cut(s)	985
BsnI	GGCC	1 cut(s)	883
Bsp1286I	GDGCHC	2 cut(s)	653, 1091
Bsp13I	TCCGGA	1 cut(s)	172
Bsp143I	GATC	7 cut(s)	163, 328, 346, 703, 1321, 1404, 1513
Bsp1720I	GCTNAGC	2 cut(s)	647, 729
Bsp19I	CCATGG	1 cut(s)	1095
Bsp68I	TCGCGA	1 cut(s)	1233
BspACI	CCGC	4 cut(s)	5, 959, 1340, 1343
BspANI	GGCC	1 cut(s)	883
BspCNI	CTCAG	8 cut(s)	316, 568, 639, 665, 678, 742, 814, 1133
BspEI	TCCGGA	1 cut(s)	172
BspFNI	CGCG	1 cut(s)	1233
BspLI	GGNNCC	4 cut(s)	171, 330, 746, 1197
BspMI	ACCTGC	1 cut(s)	367
BspPI	GGATC	4 cut(s)	323, 336, 354, 1399
BspTI	CTTAAG	1 cut(s)	1238
BsrDI	GCAATG	3 cut(s)	309, 416, 1150
BsrI	ACTGG	1 cut(s)	809
BssECI	CCNNGG	5 cut(s)	183, 967, 968, 1095, 1133
BssMI	GATC	7 cut(s)	163, 328, 346, 703, 1321, 1404, 1513
BssT1I	CCWWGG	3 cut(s)	183, 1095, 1133
Bst2UI	CCWGG	1 cut(s)	969
Bst4CI	ACNGT	5 cut(s)	312, 921, 941, 1079, 1313
Bst6I	CTCTTC	4 cut(s)	39, 210, 860, 954
BstAFI	CTTAAG	1 cut(s)	1238
BstC8I	GCNNGC	2 cut(s)	765, 1235
BstDSI	CCRYGG	1 cut(s)	1095
BstF5I	GGATG	2 cut(s)	57, 1429
BstFNI	CGCG	1 cut(s)	1233
BstKTI	GATC	7 cut(s)	166, 331, 349, 706, 1324, 1407, 1516
BstMAI	GTCTC	5 cut(s)	267, 436, 615, 810, 1044
BstMBI	GATC	7 cut(s)	163, 328, 346, 703, 1321, 1404, 1513
BstMWI	GCNNNNNNNGC	1 cut(s)	94
BstNI	CCWGG	1 cut(s)	969
BstNSI	RCATGY	2 cut(s)	88, 200
BstSCI	CCNGG	1 cut(s)	967
BstSFI	CTRYAG	2 cut(s)	1245, 1485
BstUI	CGCG	1 cut(s)	1233
BstV1I	GCAGC	3 cut(s)	106, 349, 943
BstV2I	GAAGAC	1 cut(s)	1109
BstX2I	RGATCY	2 cut(s)	328, 1404
BstYI	RGATCY	2 cut(s)	328, 1404
BsuRI	GGCC	1 cut(s)	883
BtgI	CCRYGG	1 cut(s)	1095
BtsCI	GGATG	2 cut(s)	57, 1429
BtsI	GCAGTG	2 cut(s)	934, 1273
BtsIMutI	CAGTG	5 cut(s)	99, 660, 934, 1273, 1318
BtuMI	TCGCGA	1 cut(s)	1233
BveI	ACCTGC	1 cut(s)	367
Cac8I	GCNNGC	2 cut(s)	765, 1235
CaiI	CAGNNNCTG	1 cut(s)	1317
Cfr13I	GGNCC	1 cut(s)	1137
Csp6I	GTAC	4 cut(s)	74, 461, 812, 1065
CviAII	CATG	8 cut(s)	85, 154, 197, 340, 427, 701, 857, 1096
CviQI	GTAC	4 cut(s)	74, 461, 812, 1065
DpnI	GATC	7 cut(s)	165, 330, 348, 705, 1323, 1406, 1515
DpnII	GATC	7 cut(s)	163, 328, 346, 703, 1321, 1404, 1513
DraI	TTTAAA	1 cut(s)	628
Eam1104I	CTCTTC	4 cut(s)	39, 210, 860, 954
EarI	CTCTTC	4 cut(s)	39, 210, 860, 954
EciI	GGCGGA	2 cut(s)	20, 1329
Ecl136II	GAGCTC	2 cut(s)	651, 1089
Eco130I	CCWWGG	3 cut(s)	183, 1095, 1133
Eco24I	GRGCYC	2 cut(s)	653, 1091
Eco47I	GGWCC	1 cut(s)	1137
Eco53kI	GAGCTC	2 cut(s)	651, 1089
Eco57I	CTGAAG	1 cut(s)	1551
EcoICRI	GAGCTC	2 cut(s)	651, 1089
EcoRI	GAATTC	1 cut(s)	1126
EcoRII	CCWGG	1 cut(s)	967
EcoT14I	CCWWGG	3 cut(s)	183, 1095, 1133
EcoT38I	GRGCYC	2 cut(s)	653, 1091
ErhI	CCWWGG	3 cut(s)	183, 1095, 1133
FaeI	CATG	8 cut(s)	88, 157, 200, 343, 430, 704, 860, 1099
FalI	AAGNNNNNCTT	2 cut(s)	824, 856
FaqI	GGGAC	1 cut(s)	985
FatI	CATG	8 cut(s)	84, 153, 196, 339, 426, 700, 856, 1095
FauI	CCCGC	1 cut(s)	952
FbaI	TGATCA	1 cut(s)	703
Fnu4HI	GCNGC	4 cut(s)	95, 363, 957, 1343
FokI	GGATG	2 cut(s)	64, 1416
FriOI	GRGCYC	2 cut(s)	653, 1091
Fsp4HI	GCNGC	4 cut(s)	95, 363, 957, 1343
FspBI	CTAG	1 cut(s)	501
GluI	GCNGC	4 cut(s)	95, 363, 957, 1343
GsuI	CTGGAG	2 cut(s)	401, 792
HaeIII	GGCC	1 cut(s)	883
HapII	CCGG	1 cut(s)	173
Hin1II	CATG	8 cut(s)	88, 157, 200, 343, 430, 704, 860, 1099
HincII	GTYRAC	1 cut(s)	1117
HindII	GTYRAC	1 cut(s)	1117
HpaII	CCGG	1 cut(s)	173
HphI	GGTGA	2 cut(s)	909, 1404
Hpy166II	GTNNAC	3 cut(s)	194, 814, 1117
Hpy188III	TCNNGA	9 cut(s)	173, 380, 524, 770, 1043, 1168, 1232, 1276, 1492
Hpy8I	GTNNAC	3 cut(s)	194, 814, 1117
HpyAV	CCTTC	3 cut(s)	1279, 1368, 1419
HpyCH4III	ACNGT	5 cut(s)	312, 921, 941, 1079, 1313
HpyCH4V	TGCA	4 cut(s)	29, 65, 479, 875
HpyF10VI	GCNNNNNNNGC	1 cut(s)	94
Hsp92II	CATG	8 cut(s)	88, 157, 200, 343, 430, 704, 860, 1099
Kpn2I	TCCGGA	1 cut(s)	172
Ksp22I	TGATCA	1 cut(s)	703
Kzo9I	GATC	7 cut(s)	163, 328, 346, 703, 1321, 1404, 1513
LmnI	GCTCC	2 cut(s)	382, 1342
Lsp1109I	GCAGC	3 cut(s)	106, 349, 943
LweI	GCATC	2 cut(s)	16, 235
MaeI	CTAG	1 cut(s)	501
MaeIII	GTNAC	2 cut(s)	915, 1468
MalI	GATC	7 cut(s)	165, 330, 348, 705, 1323, 1406, 1515
MboI	GATC	7 cut(s)	163, 328, 346, 703, 1321, 1404, 1513
MflI	RGATCY	2 cut(s)	328, 1404
MhlI	GDGCHC	2 cut(s)	653, 1091
MluCI	AATT	4 cut(s)	335, 1126, 1172, 1185
MlyI	GAGTC	7 cut(s)	116, 370, 506, 967, 1112, 1281, 1373
MmeI	TCCRAC	1 cut(s)	324
MroI	TCCGGA	1 cut(s)	172
MroXI	GAANNNNTTC	1 cut(s)	940
MseI	TTAA	5 cut(s)	18, 627, 666, 837, 1239
MslI	CAYNNNNRTG	1 cut(s)	819
MspCI	CTTAAG	1 cut(s)	1238
MspI	CCGG	1 cut(s)	173
MspR9I	CCNGG	1 cut(s)	969
MvaI	CCWGG	1 cut(s)	969
MvnI	CGCG	1 cut(s)	1233
MwoI	GCNNNNNNNGC	1 cut(s)	94
NcoI	CCATGG	1 cut(s)	1095
NdeII	GATC	7 cut(s)	163, 328, 346, 703, 1321, 1404, 1513
NlaIII	CATG	8 cut(s)	88, 157, 200, 343, 430, 704, 860, 1099
NlaIV	GGNNCC	4 cut(s)	171, 330, 746, 1197
NmuCI	GTSAC	1 cut(s)	915
NruI	TCGCGA	1 cut(s)	1233
NspI	RCATGY	2 cut(s)	88, 200
OliI	CACNNNNGTG	1 cut(s)	819
PasI	CCCWGGG	1 cut(s)	968
PciI	ACATGT	1 cut(s)	196
PcsI	WCGNNNNNNNCGW	1 cut(s)	543
PdmI	GAANNNNTTC	1 cut(s)	940
PfeI	GAWTC	7 cut(s)	122, 176, 472, 554, 860, 1046, 1150
PflMI	CCANNNNNTGG	2 cut(s)	154, 824
PkrI	GCNGC	4 cut(s)	96, 364, 958, 1344
PleI	GAGTC	7 cut(s)	115, 370, 505, 967, 1112, 1280, 1372
PpsI	GAGTC	7 cut(s)	115, 370, 505, 967, 1112, 1280, 1372
PscI	ACATGT	1 cut(s)	196
PsiI	TTATAA	1 cut(s)	777
Psp124BI	GAGCTC	2 cut(s)	653, 1091
Psp6I	CCWGG	1 cut(s)	967
PspGI	CCWGG	1 cut(s)	967
PspN4I	GGNNCC	4 cut(s)	171, 330, 746, 1197
PspPI	GGNCC	1 cut(s)	1137
PstNI	CAGNNNCTG	1 cut(s)	1317
PsuI	RGATCY	2 cut(s)	328, 1404
RruI	TCGCGA	1 cut(s)	1233
RsaI	GTAC	4 cut(s)	75, 462, 813, 1066
RsaNI	GTAC	4 cut(s)	74, 461, 812, 1065
RseI	CAYNNNNRTG	1 cut(s)	819
SacI	GAGCTC	2 cut(s)	653, 1091
SaqAI	TTAA	5 cut(s)	18, 627, 666, 837, 1239
SatI	GCNGC	4 cut(s)	95, 363, 957, 1343
Sau3AI	GATC	7 cut(s)	163, 328, 346, 703, 1321, 1404, 1513
Sau96I	GGNCC	1 cut(s)	1137
SchI	GAGTC	7 cut(s)	116, 370, 506, 967, 1112, 1281, 1373
ScrFI	CCNGG	1 cut(s)	969
SduI	GDGCHC	2 cut(s)	653, 1091
SfaNI	GCATC	2 cut(s)	16, 235
SfcI	CTRYAG	2 cut(s)	1245, 1485
SinI	GGWCC	1 cut(s)	1137
SmiMI	CAYNNNNRTG	1 cut(s)	819
SmlI	CTYRAG	1 cut(s)	1238
SmoI	CTYRAG	1 cut(s)	1238
Sse9I	AATT	4 cut(s)	335, 1126, 1172, 1185
SsiI	CCGC	4 cut(s)	5, 959, 1340, 1343
SspI	AATATT	1 cut(s)	398
SspMI	CTAG	1 cut(s)	501
SstI	GAGCTC	2 cut(s)	653, 1091
StyD4I	CCNGG	1 cut(s)	967
StyI	CCWWGG	3 cut(s)	183, 1095, 1133
TaaI	ACNGT	5 cut(s)	312, 921, 941, 1079, 1313
TaqI	TCGA	2 cut(s)	24, 863
TasI	AATT	4 cut(s)	335, 1126, 1172, 1185
TatI	WGTACW	2 cut(s)	811, 1064
TauI	GCSGC	1 cut(s)	1345
TfiI	GAWTC	7 cut(s)	122, 176, 472, 554, 860, 1046, 1150
Tru1I	TTAA	5 cut(s)	18, 627, 666, 837, 1239
Tru9I	TTAA	5 cut(s)	18, 627, 666, 837, 1239
TscAI	CASTG	5 cut(s)	106, 660, 934, 1273, 1318
TseFI	GTSAC	1 cut(s)	915
TseI	GCWGC	3 cut(s)	94, 362, 956
Tsp45I	GTSAC	1 cut(s)	915
TspDTI	ATGAA	8 cut(s)	68, 320, 328, 582, 873, 1298, 1418, 1539
TspRI	CASTG	5 cut(s)	106, 660, 934, 1273, 1318
Van91I	CCANNNNNTGG	2 cut(s)	154, 824
Vha464I	CTTAAG	1 cut(s)	1238
VpaK11BI	GGWCC	1 cut(s)	1137
XapI	RAATTY	1 cut(s)	1126
XceI	RCATGY	2 cut(s)	88, 200
XmnI	GAANNNNTTC	1 cut(s)	940
XspI	CTAG	1 cut(s)	501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.