Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00781

Orthogroup ID

OG0006667

Physical Location & Seq

Genomic Coordinates Reverse (-)

31893 .. 35996

Gene Structure 4104 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G017410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGGAGGGGAGGAAACTGAATTTCAGTGCACCACTTCTGTCAGTGAGACGAATTTCTGCAACTCCAGTGTCCACGAATGCAGATACTGGGAAGGTAACTCCTAGGTTGGCTAATGGAAGACATACTCTTCCTCTTCCCAAATCAGATTTTTCTTTGGAGCAGGTAACAAAACCAGTTGCAGTTCCGTTTCATTGGGAGGACATCCCAGGAAGATCTAAGGAAGGTGAAGAACCGAAGATTCAGTCTCGAGAAGAGGCTTCTGTTACTCCAAGACTTCCCCCTGGAAAGATTGTAGATGGTAAAAAGAAACCTTTGGAAAAAGAGCGAGCTGATCAAAAGGCTATCACACCCTACTTGAAATCATATTCATCGAATGAAAATGCCATGGAAGCCAAGTGCTCAAAAGAGAGAGTGAATGAGAGAAGAGCTTCAAAATTTGAGGATGAGGATGATGTTTATTCTGATGCACAAGAGACACTGTCCCCGCCTACAGAGTCTTTCTCCATGAACTGTAGTGCAACTGGCACAAACCAATCTCATTCTGCAAATGTGCAGCCATCTATTGATCCACAAACTCGAGACTTCATGATGAAGCGATTCTTACCTGCAGCCAAGGCAATGGCTTTGGAGACGCCTCATGTTGCTATAAAGAAGCAGCAATATTCAGCACCACTTGAACAACCAAGACAAGTCACAAGGGTAATTCGCCAGGATACAAGTCCCTTACCTAATCAACATCGGTCTCATATGGAACTAGTGCTGTATAGCCAGTACAAAGAGGAAGAAGAAAGTGAAGGAGAAGATGATGAGTATGATCAGCCTGGTTATATTTCACCAAAGGGTTGTGGGTTGTTTCCTCGGTTAGGCTTAAGAAATTCTTTGTGCCCTTTACCTGTTCCGGCAATGAAAGCTAGGGCCCGGGCTCTCATGTCTTGCTCCTCTAGTGTTGCAATACCAGGAAAAACTACTTGTAGTCGATCTCACAGTCAACCACTCAAACAGGTTATCAAGACTACCAATAGACAGTCACATAGCCAACCACTCAACGAGGTTATTAAGCCTGCTAAGATCCAGTCTCATAACCAACCACTCAACAAGGTTATTAAGCCTGCTAATAGTCAGTCTCATTGCCAACCACTCAATAAGCGTGATCAGGGTGCTGCTTATAATCTCAAAGCAGACCGTGGATTTTATTCAGGTGAATTGCCGAGATTGATGAATAATCAGGCTGCTCAATCCATTCAGTTTAGGCACTCTGGTGAGCAACCAAAAGGCAGGTCATCTCCTTTCAGGCAATCAAGGAGTCCTTGCATATCCCCGTATCGAAATGAACGGCCTAAATCTCCCTTTACTGGTGCGGGGTTTCTTGGCGTTCCCAAAGAAGAAAATGTCAAAGCCAATAGTAGTAAGTTCAATATGAACGACAAAGTTGGTCACAAGTCTCAGGAGGTACTAAGCCATCATAGAAATAAACAAGGGCCATATACTGTGATCCCTATGATTGAGAAGACACTATATGTAGATACTGTAAATACTACCAGAACATCGTGTCTAAATTCAAGCTCTTTGTATACCAAAGAACGAGTCGACTCTGCTGTTGAGGACTTAAGGACCCTATTAAAGAGAAGTGGGATGGAAGAAACGTCTGCCGGAGAGTCTTTGTTTCAAGATATCAAATGCCTGACTAATTTTGAGAGCAATGGCATCTCGGAACCTGCAGCATTGGAGTCTGTTGAAGATAGTTTATCTTCATTCTCCGACATTTCCCATATCAAAGGCCAAGTAGTTGCAGTGGAGGACTCCCAGCTAGGACTTGATATGAGAAGTGATGACATTATGAAAGAGGATCCACGAAATGCCAACACCATCGTGGTACAGTCTTCTCTTCCCCCACCTTTACCAAAATCACCTTCCCAGTCTTGGCTCTCGTCGACCCTCTCTTCAATTCCTTCACGGAATTCAGTCTCCTCTGGTACCAAAAGGCATAGTAAAAGGTCTGATTCCAAGACTTCTTCCACTGGCACCAAGTGGGAAACCATTGTAAAGACTTCCAATTTGCACCATGATCATGTGCGCTATTCCGAGGAATTAATTACTCATGCTTGTCAGCAATCTAAGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF688

Protein Analysis

707

Amino Acids

78.54

Weight (kDa)

9.15

Isoelectric Point (pI)

58.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF688	PF05097	1 - 366	2.3e-70	Protein of unknown function (DUF688)
DUF688	PF05097	371 - 522	2.8e-11	Protein of unknown function (DUF688)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29240 AT2G34170 AT2G34170 AT2G34170 AT2G34170 AT2G34170 AT2G34170
fragaria_vesca	FvH4_3g07680
malus_domestica	MD05G1299600.v1.1 MD10G1278900.v1.1
prunus_persica	Prupe.4G062300_v2.0.a1 Prupe.4G062300_v2.0.a1
pyrus_communis	pycom05g27780 pycom10g23290
rosa_chinensis	RchiOBHm_Chr5g0010991
rosa_laevigata	RLG00000031801
rosa_multiflora	Rmu_sc0008268.1_g000004
rosa_roxburghii	Rroxscaffold_1G00065400
rosa_rugosa	Rorug04G0454200 Rorug04G0454300
rosa_samantha	Rh5AG086500 Rh5BG081200 Rh5CG093900 Rh5DG081100
rosa_wichuraiana	Rw0G017410 Rw0G017860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1167
Acc36I	ACCTGC	4 cut(s)	151, 613, 1266, 1723
Acc65I	GGTACC	1 cut(s)	1973
AccB1I	GGYRCC	2 cut(s)	1973, 2021
AccI	GTMKAC	3 cut(s)	1571, 1587, 1931
AciI	CCGC	2 cut(s)	485, 1358
AclWI	GGATC	5 cut(s)	560, 1063, 1486, 1841, 1854
AcsI	RAATTY	6 cut(s)	19, 51, 434, 874, 1555, 1957
AcyI	GRCGYC	1 cut(s)	632
AdeI	CACNNNGTG	1 cut(s)	2028
AfaI	GTAC	4 cut(s)	773, 1452, 1875, 1975
AfiI	CCNNNNNNNGG	3 cut(s)	863, 1352, 1920
AflII	CTTAAG	2 cut(s)	868, 1606
AgsI	TTSAA	8 cut(s)	358, 432, 677, 1414, 1560, 1667, 1736, 1944
AhlI	ACTAGT	1 cut(s)	754
AjnI	CCWGG	5 cut(s)	205, 280, 708, 820, 955
AjuI	GAANNNNNNNTTGG	2 cut(s)	1894, 1926
AleI	CACNNNNGTG	2 cut(s)	1257, 1868
AluBI	AGCT	5 cut(s)	329, 428, 911, 1563, 1807
AluI	AGCT	5 cut(s)	329, 428, 911, 1563, 1807
Alw21I	GWGCWC	2 cut(s)	31, 401
Alw44I	GTGCAC	1 cut(s)	27
AlwI	GGATC	5 cut(s)	560, 1063, 1486, 1841, 1854
AlwNI	CAGNNNCTG	1 cut(s)	86
Ama87I	CYCGRG	3 cut(s)	246, 576, 918
AoxI	GGCC	4 cut(s)	915, 1334, 1478, 1777
ApaI	GGGCCC	1 cut(s)	919
ApaLI	GTGCAC	1 cut(s)	27
ApeKI	GCWGC	6 cut(s)	553, 608, 655, 1160, 1229, 1718
ApoI	RAATTY	6 cut(s)	19, 51, 434, 874, 1555, 1957
ArsI	GACNNNNNNTTYG	8 cut(s)	227, 259, 1262, 1294, 1569, 1601, 2038, 2070
AseI	ATTAAT	1 cut(s)	2090
Asp700I	GAANNNNTTC	2 cut(s)	427, 596
Asp718I	GGTACC	1 cut(s)	1973
AspA2I	CCTAGG	1 cut(s)	101
AspLEI	GCGC	1 cut(s)	2076
AspS9I	GGNCC	4 cut(s)	915, 916, 1478, 1611
AsuC2I	CCSGG	2 cut(s)	919, 920
AsuHPI	GGTGA	5 cut(s)	236, 825, 1211, 1271, 1899
AvaI	CYCGRG	3 cut(s)	246, 576, 918
AvaII	GGWCC	1 cut(s)	1611
AvrII	CCTAGG	1 cut(s)	101
BaeGI	GKGCMC	3 cut(s)	31, 887, 919
BamHI	GGATCC	1 cut(s)	1846
BanI	GGYRCC	2 cut(s)	1973, 2021
BanII	GRGCYC	2 cut(s)	919, 925
BbsI	GAAGAC	3 cut(s)	124, 1514, 1872
Bbv12I	GWGCWC	2 cut(s)	31, 401
BbvI	GCAGC	6 cut(s)	565, 620, 667, 1147, 1216, 1730
BccI	CCATC	5 cut(s)	290, 565, 1467, 1627, 1874
BceAI	ACGGC	1 cut(s)	1349
BciT130I	CCWGG	5 cut(s)	207, 282, 710, 822, 957
BciVI	GTATCC	1 cut(s)	706
BclI	TGATCA	4 cut(s)	331, 814, 1150, 2065
BcnI	CCSGG	2 cut(s)	919, 920
BcuI	ACTAGT	1 cut(s)	754
BfaI	CTAG	5 cut(s)	102, 755, 912, 942, 1808
BfmI	CTRYAG	4 cut(s)	489, 511, 606, 1716
BfrI	CTTAAG	2 cut(s)	868, 1606
BfuAI	ACCTGC	4 cut(s)	151, 613, 1266, 1723
BfuI	GTATCC	1 cut(s)	706
BglII	AGATCT	1 cut(s)	212
BisI	GCNGC	6 cut(s)	554, 609, 656, 1161, 1230, 1719
BlnI	CCTAGG	1 cut(s)	101
BlsI	GCNGC	6 cut(s)	555, 610, 657, 1162, 1231, 1720
Bme1390I	CCNGG	7 cut(s)	207, 282, 710, 822, 919, 920, 957
Bme18I	GGWCC	1 cut(s)	1611
BmeT110I	CYCGRG	3 cut(s)	246, 576, 918
BmgT120I	GGNCC	4 cut(s)	915, 916, 1478, 1611
BmiI	GGNNCC	6 cut(s)	917, 1613, 1713, 1848, 1975, 2023
BmrFI	CCNGG	7 cut(s)	207, 282, 710, 822, 919, 920, 957
BmrI	ACTGGG	2 cut(s)	96, 1909
BmsI	GCATC	2 cut(s)	454, 1713
BmuI	ACTGGG	2 cut(s)	96, 1909
BpiI	GAAGAC	3 cut(s)	124, 1514, 1872
BplI	GAGNNNNNCTC	2 cut(s)	485, 517
BpmI	CTGGAG	1 cut(s)	48
BpuMI	CCSGG	2 cut(s)	919, 920
BsaHI	GRCGYC	1 cut(s)	632
BsaI	GGTCTC	1 cut(s)	747
BsaJI	CCNNGG	9 cut(s)	101, 205, 280, 384, 612, 857, 918, 1183, 2082
Bsc4I	CCNNNNNNNGG	3 cut(s)	863, 1352, 1920
Bse1I	ACTGG	9 cut(s)	65, 91, 173, 526, 769, 1072, 1357, 1915, 2023
Bse3DI	GCAATG	4 cut(s)	624, 909, 1126, 1705
BseBI	CCWGG	5 cut(s)	207, 282, 710, 822, 957
BseDI	CCNNGG	9 cut(s)	101, 205, 280, 384, 612, 857, 918, 1183, 2082
BseGI	GGATG	4 cut(s)	201, 448, 454, 1638
BseLI	CCNNNNNNNGG	3 cut(s)	863, 1352, 1920
BseMI	GCAATG	4 cut(s)	624, 909, 1126, 1705
BseMII	CTCAG	1 cut(s)	1457
BseNI	ACTGG	9 cut(s)	65, 91, 173, 526, 769, 1072, 1357, 1915, 2023
BseRI	GAGGAG	2 cut(s)	928, 1957
BseSI	GKGCMC	3 cut(s)	31, 887, 919
BseXI	GCAGC	6 cut(s)	565, 620, 667, 1147, 1216, 1730
BseYI	CCCAGC	1 cut(s)	1803
BsgI	GTGCAG	1 cut(s)	572
BshFI	GGCC	4 cut(s)	917, 1336, 1480, 1779
BshNI	GGYRCC	2 cut(s)	1973, 2021
BsiHKAI	GWGCWC	2 cut(s)	31, 401
BsiHKCI	CYCGRG	3 cut(s)	246, 576, 918
BsiSI	CCGG	3 cut(s)	899, 919, 1650
BslFI	GGGAC	2 cut(s)	466, 705
BslI	CCNNNNNNNGG	3 cut(s)	863, 1352, 1920
BsmBI	CGTCTC	2 cut(s)	40, 623
BsmFI	GGGAC	2 cut(s)	466, 705
BsmI	GAATGC	1 cut(s)	82
BsnI	GGCC	4 cut(s)	917, 1336, 1480, 1779
Bso31I	GGTCTC	1 cut(s)	747
BsoBI	CYCGRG	3 cut(s)	246, 576, 918
Bsp120I	GGGCCC	1 cut(s)	915
Bsp1286I	GDGCHC	5 cut(s)	31, 401, 887, 919, 925
Bsp19I	CCATGG	1 cut(s)	384
BspACI	CCGC	2 cut(s)	485, 1358
BspANI	GGCC	4 cut(s)	917, 1336, 1480, 1779
BspCNI	CTCAG	1 cut(s)	1456
BspHI	TCATGA	1 cut(s)	585
BspLI	GGNNCC	6 cut(s)	917, 1613, 1713, 1848, 1975, 2023
BspMAI	CTGCAG	2 cut(s)	610, 1720
BspMI	ACCTGC	4 cut(s)	151, 613, 1266, 1723
BspPI	GGATC	5 cut(s)	560, 1063, 1486, 1841, 1854
BspQI	GCTCTTC	1 cut(s)	418
BspT107I	GGYRCC	2 cut(s)	1973, 2021
BspTI	CTTAAG	2 cut(s)	868, 1606
BspTNI	GGTCTC	1 cut(s)	747
BsrDI	GCAATG	4 cut(s)	624, 909, 1126, 1705
BsrI	ACTGG	9 cut(s)	65, 91, 173, 526, 769, 1072, 1357, 1915, 2023
BssECI	CCNNGG	9 cut(s)	101, 205, 280, 384, 612, 857, 918, 1183, 2082
BssNAI	GTATAC	1 cut(s)	1572
BssNI	GRCGYC	1 cut(s)	632
BssT1I	CCWWGG	3 cut(s)	101, 384, 612
Bst1107I	GTATAC	1 cut(s)	1572
Bst2UI	CCWGG	5 cut(s)	207, 282, 710, 822, 957
Bst4CI	ACNGT	8 cut(s)	480, 512, 986, 1026, 1184, 1489, 1528, 1878
Bst6I	CTCTTC	6 cut(s)	132, 138, 246, 418, 1890, 1945
BstACI	GRCGYC	1 cut(s)	632
BstAFI	CTTAAG	2 cut(s)	868, 1606
BstC8I	GCNNGC	3 cut(s)	327, 1062, 1110
BstDEI	CTNAG	5 cut(s)	216, 1065, 1443, 1454, 2115
BstDSI	CCRYGG	2 cut(s)	384, 1183
BstENI	CCTNNNNNAGG	1 cut(s)	861
BstF5I	GGATG	4 cut(s)	201, 448, 454, 1638
BstHHI	GCGC	1 cut(s)	2076
BstMWI	GCNNNNNNNGC	3 cut(s)	389, 614, 908
BstNI	CCWGG	5 cut(s)	207, 282, 710, 822, 957
BstSCI	CCNGG	7 cut(s)	205, 280, 708, 820, 917, 918, 955
BstSFI	CTRYAG	4 cut(s)	489, 511, 606, 1716
BstSLI	GKGCMC	3 cut(s)	31, 887, 919
BstV1I	GCAGC	6 cut(s)	565, 620, 667, 1147, 1216, 1730
BstV2I	GAAGAC	3 cut(s)	124, 1514, 1872
BstX2I	RGATCY	3 cut(s)	212, 1068, 1846
BstXI	CCANNNNNNTGG	1 cut(s)	619
BstYI	RGATCY	3 cut(s)	212, 1068, 1846
BstZ17I	GTATAC	1 cut(s)	1572
BsuI	GTATCC	1 cut(s)	706
BsuRI	GGCC	4 cut(s)	917, 1336, 1480, 1779
BtgI	CCRYGG	2 cut(s)	384, 1183
BtsCI	GGATG	4 cut(s)	201, 448, 454, 1638
BtsI	GCAGTG	1 cut(s)	1797
BtsIMutI	CAGTG	6 cut(s)	31, 48, 72, 476, 1797, 2016
BveI	ACCTGC	4 cut(s)	151, 613, 1266, 1723
Cac8I	GCNNGC	3 cut(s)	327, 1062, 1110
CaiI	CAGNNNCTG	1 cut(s)	86
CciI	TCATGA	1 cut(s)	585
CfoI	GCGC	1 cut(s)	2076
Cfr13I	GGNCC	4 cut(s)	915, 916, 1478, 1611
Cfr9I	CCCGGG	1 cut(s)	918
CseI	GACGC	1 cut(s)	640
Csp6I	GTAC	4 cut(s)	772, 1451, 1874, 1974
CviAII	CATG	8 cut(s)	385, 505, 586, 638, 928, 2063, 2069, 2099
CviQI	GTAC	4 cut(s)	772, 1451, 1874, 1974
DdeI	CTNAG	5 cut(s)	216, 1065, 1443, 1454, 2115
DraIII	CACNNNGTG	1 cut(s)	2028
Eam1104I	CTCTTC	6 cut(s)	132, 138, 246, 418, 1890, 1945
EarI	CTCTTC	6 cut(s)	132, 138, 246, 418, 1890, 1945
Eco130I	CCWWGG	3 cut(s)	101, 384, 612
Eco24I	GRGCYC	2 cut(s)	919, 925
Eco31I	GGTCTC	1 cut(s)	747
Eco32I	GATATC	1 cut(s)	1672
Eco47I	GGWCC	1 cut(s)	1611
Eco88I	CYCGRG	3 cut(s)	246, 576, 918
EcoNI	CCTNNNNNAGG	1 cut(s)	861
EcoO109I	RGGNCCY	2 cut(s)	915, 1611
EcoRI	GAATTC	1 cut(s)	1957
EcoRII	CCWGG	5 cut(s)	205, 280, 708, 820, 955
EcoRV	GATATC	1 cut(s)	1672
EcoT14I	CCWWGG	3 cut(s)	101, 384, 612
EcoT38I	GRGCYC	2 cut(s)	919, 925
ErhI	CCWWGG	3 cut(s)	101, 384, 612
Esp3I	CGTCTC	2 cut(s)	40, 623
FaeI	CATG	8 cut(s)	388, 508, 589, 641, 931, 2066, 2072, 2102
FalI	AAGNNNNNCTT	6 cut(s)	584, 616, 862, 894, 1291, 1323
FaqI	GGGAC	2 cut(s)	466, 705
FatI	CATG	8 cut(s)	384, 504, 585, 637, 927, 2062, 2068, 2098
FauI	CCCGC	2 cut(s)	492, 1351
FauNDI	CATATG	1 cut(s)	747
FbaI	TGATCA	4 cut(s)	331, 814, 1150, 2065
FblI	GTMKAC	3 cut(s)	1571, 1587, 1931
Fnu4HI	GCNGC	6 cut(s)	554, 609, 656, 1161, 1230, 1719
FokI	GGATG	4 cut(s)	188, 455, 461, 1645
FriOI	GRGCYC	2 cut(s)	919, 925
Fsp4HI	GCNGC	6 cut(s)	554, 609, 656, 1161, 1230, 1719
FspBI	CTAG	5 cut(s)	102, 755, 912, 942, 1808
GlaI	GCGC	1 cut(s)	2075
GluI	GCNGC	6 cut(s)	554, 609, 656, 1161, 1230, 1719
GsaI	CCCAGC	1 cut(s)	1807
GsuI	CTGGAG	1 cut(s)	48
HaeIII	GGCC	4 cut(s)	917, 1336, 1480, 1779
HapII	CCGG	3 cut(s)	899, 919, 1650
HgaI	GACGC	1 cut(s)	640
HhaI	GCGC	1 cut(s)	2076
Hin1I	GRCGYC	1 cut(s)	632
Hin1II	CATG	8 cut(s)	388, 508, 589, 641, 931, 2066, 2072, 2102
Hin6I	GCGC	1 cut(s)	2074
HinP1I	GCGC	1 cut(s)	2074
HincII	GTYRAC	3 cut(s)	989, 1588, 1932
HindII	GTYRAC	3 cut(s)	989, 1588, 1932
HpaII	CCGG	3 cut(s)	899, 919, 1650
HphI	GGTGA	5 cut(s)	236, 825, 1211, 1271, 1899
Hpy166II	GTNNAC	6 cut(s)	29, 72, 989, 1572, 1588, 1932
Hpy188I	TCNGA	6 cut(s)	145, 463, 1711, 1759, 1999, 2083
Hpy188III	TCNNGA	7 cut(s)	246, 248, 578, 586, 1009, 1445, 1667
Hpy8I	GTNNAC	6 cut(s)	29, 72, 989, 1572, 1588, 1932
Hpy99I	CGWCG	1 cut(s)	1933
HpyAV	CCTTC	5 cut(s)	85, 215, 788, 1920, 1959
HpyCH4III	ACNGT	8 cut(s)	480, 512, 986, 1026, 1184, 1489, 1528, 1878
HpyCH4IV	ACGT	1 cut(s)	1643
HpyF10VI	GCNNNNNNNGC	3 cut(s)	389, 614, 908
HpyF3I	CTNAG	5 cut(s)	216, 1065, 1443, 1454, 2115
HpySE526I	ACGT	1 cut(s)	1643
Hsp92I	GRCGYC	1 cut(s)	632
Hsp92II	CATG	8 cut(s)	388, 508, 589, 641, 931, 2066, 2072, 2102
HspAI	GCGC	1 cut(s)	2074
KpnI	GGTACC	1 cut(s)	1977
Ksp22I	TGATCA	4 cut(s)	331, 814, 1150, 2065
LguI	GCTCTTC	1 cut(s)	418
LmnI	GCTCC	2 cut(s)	157, 941
Lsp1109I	GCAGC	6 cut(s)	565, 620, 667, 1147, 1216, 1730
LweI	GCATC	2 cut(s)	454, 1713
MaeI	CTAG	5 cut(s)	102, 755, 912, 942, 1808
MaeII	ACGT	1 cut(s)	1643
MaeIII	GTNAC	6 cut(s)	94, 163, 262, 691, 1026, 1433
MflI	RGATCY	3 cut(s)	212, 1068, 1846
MhlI	GDGCHC	5 cut(s)	31, 401, 887, 919, 925
MlyI	GAGTC	7 cut(s)	503, 1312, 1583, 1593, 1664, 1736, 1793
MmeI	TCCRAC	1 cut(s)	1782
MroXI	GAANNNNTTC	2 cut(s)	427, 596
MseI	TTAA	7 cut(s)	869, 1056, 1104, 1607, 1619, 2090, 2122
MslI	CAYNNNNRTG	3 cut(s)	1257, 1868, 2067
MspCI	CTTAAG	2 cut(s)	868, 1606
MspI	CCGG	3 cut(s)	899, 919, 1650
MspR9I	CCNGG	7 cut(s)	207, 282, 710, 822, 919, 920, 957
Mva1269I	GAATGC	1 cut(s)	82
MvaI	CCWGG	5 cut(s)	207, 282, 710, 822, 957
MwoI	GCNNNNNNNGC	3 cut(s)	389, 614, 908
NciI	CCSGG	2 cut(s)	919, 920
NcoI	CCATGG	1 cut(s)	384
NdeI	CATATG	1 cut(s)	747
NlaIII	CATG	8 cut(s)	388, 508, 589, 641, 931, 2066, 2072, 2102
NlaIV	GGNNCC	6 cut(s)	917, 1613, 1713, 1848, 1975, 2023
NmeAIII	GCCGAG	1 cut(s)	1233
NmuCI	GTSAC	3 cut(s)	691, 1026, 1433
OliI	CACNNNNGTG	2 cut(s)	1257, 1868
PaeR7I	CTCGAG	2 cut(s)	246, 576
PagI	TCATGA	1 cut(s)	585
PciSI	GCTCTTC	1 cut(s)	418
PctI	GAATGC	1 cut(s)	82
PdmI	GAANNNNTTC	2 cut(s)	427, 596
PfeI	GAWTC	3 cut(s)	238, 597, 2000
PflFI	GACNNNGTC	1 cut(s)	478
PkrI	GCNGC	6 cut(s)	555, 610, 657, 1162, 1231, 1720
PleI	GAGTC	7 cut(s)	502, 1311, 1583, 1592, 1663, 1735, 1793
PpsI	GAGTC	7 cut(s)	502, 1311, 1583, 1592, 1663, 1735, 1793
PpuMI	RGGWCCY	1 cut(s)	1611
PshBI	ATTAAT	1 cut(s)	2090
PsiI	TTATAA	1 cut(s)	1167
Psp5II	RGGWCCY	1 cut(s)	1611
Psp6I	CCWGG	5 cut(s)	205, 280, 708, 820, 955
PspFI	CCCAGC	1 cut(s)	1803
PspGI	CCWGG	5 cut(s)	205, 280, 708, 820, 955
PspN4I	GGNNCC	6 cut(s)	917, 1613, 1713, 1848, 1975, 2023
PspOMI	GGGCCC	1 cut(s)	915
PspPI	GGNCC	4 cut(s)	915, 916, 1478, 1611
PspPPI	RGGWCCY	1 cut(s)	1611
PstI	CTGCAG	2 cut(s)	610, 1720
PstNI	CAGNNNCTG	1 cut(s)	86
PsuI	RGATCY	3 cut(s)	212, 1068, 1846
PsyI	GACNNNGTC	1 cut(s)	478
RsaI	GTAC	4 cut(s)	773, 1452, 1875, 1975
RsaNI	GTAC	4 cut(s)	772, 1451, 1874, 1974
RseI	CAYNNNNRTG	3 cut(s)	1257, 1868, 2067
SalI	GTCGAC	2 cut(s)	1586, 1930
SapI	GCTCTTC	1 cut(s)	418
SaqAI	TTAA	7 cut(s)	869, 1056, 1104, 1607, 1619, 2090, 2122
SatI	GCNGC	6 cut(s)	554, 609, 656, 1161, 1230, 1719
Sau96I	GGNCC	4 cut(s)	915, 916, 1478, 1611
SchI	GAGTC	7 cut(s)	503, 1312, 1583, 1593, 1664, 1736, 1793
ScrFI	CCNGG	7 cut(s)	207, 282, 710, 822, 919, 920, 957
SduI	GDGCHC	5 cut(s)	31, 401, 887, 919, 925
SfaNI	GCATC	2 cut(s)	454, 1713
SfcI	CTRYAG	4 cut(s)	489, 511, 606, 1716
Sfr274I	CTCGAG	2 cut(s)	246, 576
SinI	GGWCC	1 cut(s)	1611
SlaI	CTCGAG	2 cut(s)	246, 576
SmaI	CCCGGG	1 cut(s)	920
SmiMI	CAYNNNNRTG	3 cut(s)	1257, 1868, 2067
SmlI	CTYRAG	4 cut(s)	246, 576, 868, 1606
SmoI	CTYRAG	4 cut(s)	246, 576, 868, 1606
SpeI	ACTAGT	1 cut(s)	754
SrfI	GCCCGGGC	1 cut(s)	920
SsiI	CCGC	2 cut(s)	485, 1358
SspI	AATATT	1 cut(s)	662
SspMI	CTAG	5 cut(s)	102, 755, 912, 942, 1808
StyD4I	CCNGG	7 cut(s)	205, 280, 708, 820, 917, 918, 955
StyI	CCWWGG	3 cut(s)	101, 384, 612
TaaI	ACNGT	8 cut(s)	480, 512, 986, 1026, 1184, 1489, 1528, 1878
TaiI	ACGT	1 cut(s)	1646
TaqI	TCGA	7 cut(s)	247, 371, 577, 976, 1324, 1587, 1931
TaqII	GACCGA	1 cut(s)	729
TatI	WGTACW	1 cut(s)	771
TfiI	GAWTC	3 cut(s)	238, 597, 2000
Tru1I	TTAA	7 cut(s)	869, 1056, 1104, 1607, 1619, 2090, 2122
Tru9I	TTAA	7 cut(s)	869, 1056, 1104, 1607, 1619, 2090, 2122
TscAI	CASTG	6 cut(s)	31, 48, 72, 483, 1797, 2023
TseFI	GTSAC	3 cut(s)	691, 1026, 1433
TseI	GCWGC	6 cut(s)	553, 608, 655, 1160, 1229, 1718
Tsp45I	GTSAC	3 cut(s)	691, 1026, 1433
TspGWI	ACGGA	2 cut(s)	174, 1969
TspMI	CCCGGG	1 cut(s)	918
TspRI	CASTG	6 cut(s)	31, 48, 72, 483, 1797, 2023
Tth111I	GACNNNGTC	1 cut(s)	478
Vha464I	CTTAAG	2 cut(s)	868, 1606
VneI	GTGCAC	1 cut(s)	27
VpaK11BI	GGWCC	1 cut(s)	1611
VspI	ATTAAT	1 cut(s)	2090
XagI	CCTNNNNNAGG	1 cut(s)	861
XapI	RAATTY	6 cut(s)	19, 51, 434, 874, 1555, 1957
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1867
XhoI	CTCGAG	2 cut(s)	246, 576
XmaI	CCCGGG	1 cut(s)	918
XmaJI	CCTAGG	1 cut(s)	101
XmiI	GTMKAC	3 cut(s)	1571, 1587, 1931
XmnI	GAANNNNTTC	2 cut(s)	427, 596
XspI	CTAG	5 cut(s)	102, 755, 912, 942, 1808

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.