AT2G35215

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
14839027 .. 14839916
890 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G35215.1

Sequence Viewer

Length: 321 bp
ATGAGCCTGAACTGCCTCGCTTGCCACATCTTGCAAAGAACAGACTCGGACAGAGACATGGGAAGCCGTAAAGATTCAAGCTTTAAAGAAAACTTCGCAACGTCAGCGTTTGAAAAGATGGTAAGGAACAGATCATCGTTGCCCGTAGTGAGACGGGTCAATAAGGGTCATCGCAGGCTTTACAGTGCGGACATCATGGTCTATGGGGAACTGGACGAGCCCAAGCTGGTCAGAAGCAGTGGGATCAGAAGGGATTGGAGTTTTGAGGATCTAAAGAAACACAAAGATCAGCTAAGAATTGAAGAGACAATAAAGGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

106

Amino Acids

12.46

Weight (kDa)

9.46

Isoelectric Point (pI)

81.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015976)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G35215 AT5G46770
fragaria_vesca FvH4_5g22090
malus_domestica MD16G1274300.v1.1
prunus_persica Prupe.5G036400_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0209741
rosa_laevigata RLG00000003097
rosa_multiflora Rmu_sc0002616.1_g000018
rosa_roxburghii Rroxscaffold_3G00249110
rosa_rugosa Rorug07G0116000
rosa_samantha Rh7AG249500 Rh7BG243400 Rh7CG265500 Rh7DG255300
rosa_wichuraiana Rw7G021150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 197
AciI CCGC 1 cut(s) 188
AclWI GGATC 2 cut(s) 251, 276
AgsI TTSAA 3 cut(s) 78, 113, 302
AluBI AGCT 3 cut(s) 81, 226, 292
AluI AGCT 3 cut(s) 81, 226, 292
Alw26I GTCTC 3 cut(s) 48, 145, 299
AlwI GGATC 2 cut(s) 251, 276
BanII GRGCYC 1 cut(s) 222
BccI CCATC 1 cut(s) 112
BceAI ACGGC 1 cut(s) 51
BcoDI GTCTC 3 cut(s) 48, 145, 299
Bse1I ACTGG 1 cut(s) 216
BseNI ACTGG 1 cut(s) 216
BsmAI GTCTC 3 cut(s) 48, 145, 299
BsmBI CGTCTC 1 cut(s) 145
Bsp1286I GDGCHC 1 cut(s) 222
Bsp143I GATC 4 cut(s) 131, 243, 268, 286
BspACI CCGC 1 cut(s) 188
BspPI GGATC 2 cut(s) 251, 276
BsrI ACTGG 1 cut(s) 216
BssMI GATC 4 cut(s) 131, 243, 268, 286
Bst4CI ACNGT 1 cut(s) 185
Bst6I CTCTTC 1 cut(s) 297
BstC8I GCNNGC 2 cut(s) 22, 176
BstDEI CTNAG 1 cut(s) 293
BstKTI GATC 4 cut(s) 134, 246, 271, 289
BstMAI GTCTC 3 cut(s) 48, 145, 299
BstMBI GATC 4 cut(s) 131, 243, 268, 286
BstMWI GCNNNNNNNGC 3 cut(s) 12, 21, 104
BstX2I RGATCY 1 cut(s) 268
BstYI RGATCY 1 cut(s) 268
BtgZI GCGATG 1 cut(s) 155
BtsI GCAGTG 1 cut(s) 244
BtsIMutI CAGTG 2 cut(s) 190, 244
Cac8I GCNNGC 2 cut(s) 22, 176
CviAII CATG 2 cut(s) 58, 196
CviJI RGCY 7 cut(s) 6, 66, 81, 178, 220, 226, 292
CviKI_1 RGCY 7 cut(s) 6, 66, 81, 178, 220, 226, 292
DdeI CTNAG 1 cut(s) 293
DpnI GATC 4 cut(s) 133, 245, 270, 288
DpnII GATC 4 cut(s) 131, 243, 268, 286
DraI TTTAAA 1 cut(s) 85
DrdI GACNNNNNNGTC 1 cut(s) 197
DseDI GACNNNNNNGTC 1 cut(s) 197
Eam1104I CTCTTC 1 cut(s) 297
EarI CTCTTC 1 cut(s) 297
Eco24I GRGCYC 1 cut(s) 222
EcoT38I GRGCYC 1 cut(s) 222
Esp3I CGTCTC 1 cut(s) 145
FaeI CATG 2 cut(s) 61, 199
FaiI YATR 3 cut(s) 59, 197, 204
FatI CATG 2 cut(s) 57, 195
FriOI GRGCYC 1 cut(s) 222
Hin1II CATG 2 cut(s) 61, 199
HindIII AAGCTT 1 cut(s) 79
HinfI GANTC 2 cut(s) 44, 74
Hpy188I TCNGA 3 cut(s) 49, 233, 248
HpyAV CCTTC 1 cut(s) 243
HpyCH4III ACNGT 1 cut(s) 185
HpyCH4IV ACGT 1 cut(s) 101
HpyCH4V TGCA 1 cut(s) 34
HpyF10VI GCNNNNNNNGC 3 cut(s) 12, 21, 104
HpyF3I CTNAG 1 cut(s) 293
HpySE526I ACGT 1 cut(s) 101
Hsp92II CATG 2 cut(s) 61, 199
Kzo9I GATC 4 cut(s) 131, 243, 268, 286
LpnPI CCDG 4 cut(s) 20, 160, 197, 212
MaeII ACGT 1 cut(s) 101
MalI GATC 4 cut(s) 133, 245, 270, 288
MboI GATC 4 cut(s) 131, 243, 268, 286
MboII GAAGA 1 cut(s) 314
MflI RGATCY 1 cut(s) 268
MhlI GDGCHC 1 cut(s) 222
MluCI AATT 1 cut(s) 297
MlyI GAGTC 1 cut(s) 38
MnlI CCTC 2 cut(s) 26, 259
MseI TTAA 1 cut(s) 84
MwoI GCNNNNNNNGC 3 cut(s) 12, 21, 104
NdeII GATC 4 cut(s) 131, 243, 268, 286
NlaIII CATG 2 cut(s) 61, 199
PfeI GAWTC 1 cut(s) 74
PleI GAGTC 1 cut(s) 38
PpsI GAGTC 1 cut(s) 38
PsuI RGATCY 1 cut(s) 268
SaqAI TTAA 1 cut(s) 84
Sau3AI GATC 4 cut(s) 131, 243, 268, 286
SchI GAGTC 1 cut(s) 38
SduI GDGCHC 1 cut(s) 222
SetI ASST 4 cut(s) 83, 104, 228, 294
Sse9I AATT 1 cut(s) 297
SsiI CCGC 1 cut(s) 188
TaaI ACNGT 1 cut(s) 185
TaiI ACGT 1 cut(s) 104
TasI AATT 1 cut(s) 297
TfiI GAWTC 1 cut(s) 74
Tru1I TTAA 1 cut(s) 84
Tru9I TTAA 1 cut(s) 84
TscAI CASTG 2 cut(s) 190, 244
TspRI CASTG 2 cut(s) 190, 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.