AT2G36880

Catalyzes the formation of S-adenosylmethionine from methionine and ATP

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0010678
Physical Location & Seq
Reverse (-)
15479281 .. 15481412
2132 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G36880.2

Sequence Viewer

Length: 1173 bp
ATGGAAACGTTCCTATTTACCTCTGAATCCGTCAATGAAGGACACCCAGACAAGCTTTGTGACCAGATTTCTGATGCGATCCTTGATGCTTGCTTAGAGCAAGATCCTGAAAGCAAAGTGGCGTGTGAGACATGCACCAAGACCAACATGGTGATGGTGTTTGGTGAGATCACTACCGCTGCGAAAGTTGACTATGAGAAGATTGTTAGATCCACTTGCAGGGAGATTGGTTTTATCTCTGCTGATGTTGGTCTTGACGCTGACAAATGCAATGTTTTGGTTAACATTGAGCAACAGAGCCCTGACATTGCTCAGGGTGTTCATGGTCATTTGACCAAGAAGCCTGAAGATATTGGTGCTGGTGATCAGGGACATATGTTTGGGTATGCTACTGATGAGACTCCTGAGCTCATGCCGTTGACTCATGTCCTAGCCACCAAGCTTGGTGCTAAGCTTACTGAAGTGAGGAAGAACAAGACTTGCCCATGGTTGAGGCCTGATGGTAAGACACAAGTCACAGTGGAGTACAAGAACGATGGTGGAGCTATGATTCCGATTAGAGTCCACACTGTTCTTATCTCAACTCAACATGACGAAACTGTCACCAATGATGAGATTGCTGCTGACTTGAAGGAGCATGTGATCAAGCCTGTTATCCCTGCTAAGTACCTTGACGATAACACCATCTTTCACTTGAACCCATCTGGTCGTTTTGTCATCGGAGGGCCTCATGGTGATGCTGGACTTACAGGGAGGAAGATCATCATTGACACTTATGGTGGTTGGGGTGCTCATGGTGGAGGTGCCTTCTCAGGAAAGGACCCAACCAAGGTTGACAGAAGCGGTGCCTATATCGTGAGGCAGGCTGCAAAGAGCGTGGTAGCAGCAGGACTCGCACGCCGTTGTATCGTGCAGGTATCATACGCCATTGGTGTCCCTGAGCCGCTCTCAGTGTTTGTTGACACCTACAAGACCGGGACCATCCCAGACAAGGATATCCTTGTGTTGATCAAGGAAGCATTTGACTTCAGGCCGGGAATGATGGCCATTAACCTTGACCTTAAGAGGGGAGGTAACTTCAGGTTCCAGAAAACCGCTGCGTATGGCCATTTCGGGCGTGATGACCCTGACTTCACTTGGGAGGTTGTCAAGCCGCTCAAGCCAAAGGCCTAG

Protein Analysis

390

Amino Acids

42.5

Weight (kDa)

5.76

Isoelectric Point (pI)

24.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S-AdoMet_synt_N PF00438 4 - 101 2.1e-43 S-adenosylmethionine synthetase, N-terminal domain
S-AdoMet_synt_M PF02772 117 - 238 9.6e-48 S-adenosylmethionine synthetase, central domain
S-AdoMet_synt_C PF02773 240 - 381 1e-59 S-adenosylmethionine synthetase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010678)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G36880 AT2G36880
fragaria_vesca FvH4_6g16510
malus_domestica MD04G1091900.v1.1 MD12G1109900.v1.1
prunus_persica Prupe.7G128500_v2.0.a1
pyrus_communis pycom04g08660 pycom12g11080
rosa_chinensis RchiOBHm_Chr3g0470421
rosa_laevigata RLG00000024269
rosa_multiflora Rmu_sc0002383.1_g000009 Rmu_sc0020134.1_g000003
rosa_roxburghii Rroxscaffold_6G00410830
rosa_rugosa Rorug03G0108600 Rorug03G0108700
rosa_samantha Rh3AG159100 Rh3BG183600 Rh3CG174100 Rh3DG191200
rosa_wichuraiana Rw3G015070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 599
Acc36I ACCTGC 1 cut(s) 904
AccB1I GGYRCC 2 cut(s) 803, 845
AccBSI CCGCTC 2 cut(s) 946, 1156
AciI CCGC 5 cut(s) 177, 843, 944, 1095, 1154
AclI AACGTT 1 cut(s) 8
AclWI GGATC 3 cut(s) 73, 98, 204
AcoI YGGCCR 2 cut(s) 1044, 1105
AcuI CTGAAG 4 cut(s) 366, 480, 1012, 1063
AfaI GTAC 2 cut(s) 527, 668
AfiI CCNNNNNNNGG 4 cut(s) 219, 829, 991, 1066
AflII CTTAAG 1 cut(s) 1061
AgsI TTSAA 2 cut(s) 631, 697
AluBI AGCT 5 cut(s) 55, 409, 442, 454, 545
AluI AGCT 5 cut(s) 55, 409, 442, 454, 545
Alw21I GWGCWC 2 cut(s) 411, 793
Alw26I GTCTC 2 cut(s) 122, 392
AlwI GGATC 3 cut(s) 73, 98, 204
AoxI GGCC 6 cut(s) 494, 725, 1031, 1044, 1105, 1167
ApeKI GCWGC 5 cut(s) 179, 620, 866, 884, 1097
AspS9I GGNCC 3 cut(s) 725, 820, 978
AsuC2I CCSGG 2 cut(s) 976, 1035
AsuHPI GGTGA 5 cut(s) 163, 176, 374, 595, 746
AvaII GGWCC 2 cut(s) 820, 978
BalI TGGCCA 2 cut(s) 1046, 1107
BanI GGYRCC 2 cut(s) 803, 845
BanII GRGCYC 2 cut(s) 302, 411
Bbv12I GWGCWC 2 cut(s) 411, 793
BbvI GCAGC 5 cut(s) 166, 607, 853, 896, 1084
BccI CCATC 7 cut(s) 148, 494, 530, 692, 709, 989, 1036
BceAI ACGGC 2 cut(s) 400, 885
BclI TGATCA 3 cut(s) 364, 642, 1008
BcnI CCSGG 2 cut(s) 976, 1035
BcoDI GTCTC 2 cut(s) 122, 392
BfaI CTAG 2 cut(s) 431, 1171
BfrI CTTAAG 1 cut(s) 1061
BfuAI ACCTGC 1 cut(s) 904
BisI GCNGC 7 cut(s) 180, 621, 867, 885, 944, 1098, 1154
BlpI GCTNAGC 1 cut(s) 450
BlsI GCNGC 7 cut(s) 181, 622, 868, 886, 945, 1099, 1155
Bme1390I CCNGG 2 cut(s) 976, 1035
Bme18I GGWCC 2 cut(s) 820, 978
BmgT120I GGNCC 3 cut(s) 725, 820, 978
BmiI GGNNCC 5 cut(s) 805, 822, 847, 979, 1085
BmrFI CCNGG 2 cut(s) 976, 1035
BmsI GCATC 3 cut(s) 64, 76, 727
BoxI GACNNNNGTC 2 cut(s) 425, 512
BplI GAGNNNNNCTC 2 cut(s) 932, 964
Bpu10I CCTNAGC 3 cut(s) 312, 405, 939
Bpu1102I GCTNAGC 1 cut(s) 450
BpuEI CTTGAG 1 cut(s) 1142
BpuMI CCSGG 2 cut(s) 976, 1035
BsaJI CCNNGG 2 cut(s) 485, 828
Bsc4I CCNNNNNNNGG 4 cut(s) 219, 829, 991, 1066
Bse3DI GCAATG 2 cut(s) 277, 306
BseDI CCNNGG 2 cut(s) 485, 828
BseGI GGATG 1 cut(s) 981
BseLI CCNNNNNNNGG 4 cut(s) 219, 829, 991, 1066
BseMI GCAATG 2 cut(s) 277, 306
BseMII CTCAG 5 cut(s) 326, 396, 825, 930, 963
BseXI GCAGC 5 cut(s) 166, 607, 853, 896, 1084
BsgI GTGCAG 1 cut(s) 932
BshFI GGCC 6 cut(s) 496, 727, 1033, 1046, 1107, 1169
BshNI GGYRCC 2 cut(s) 803, 845
BsiHKAI GWGCWC 2 cut(s) 411, 793
BsiSI CCGG 2 cut(s) 975, 1034
BslFI GGGAC 3 cut(s) 384, 920, 991
BslI CCNNNNNNNGG 4 cut(s) 219, 829, 991, 1066
BsmAI GTCTC 2 cut(s) 122, 392
BsmFI GGGAC 3 cut(s) 384, 920, 991
BsnI GGCC 6 cut(s) 496, 727, 1033, 1046, 1107, 1169
Bsp1286I GDGCHC 3 cut(s) 302, 411, 793
Bsp143I GATC 8 cut(s) 78, 103, 168, 209, 364, 642, 759, 1008
Bsp1720I GCTNAGC 1 cut(s) 450
Bsp19I CCATGG 1 cut(s) 485
BspACI CCGC 5 cut(s) 177, 843, 944, 1095, 1154
BspANI GGCC 6 cut(s) 496, 727, 1033, 1046, 1107, 1169
BspCNI CTCAG 5 cut(s) 325, 397, 824, 931, 962
BspLI GGNNCC 5 cut(s) 805, 822, 847, 979, 1085
BspMI ACCTGC 1 cut(s) 904
BspPI GGATC 3 cut(s) 73, 98, 204
BspT107I GGYRCC 2 cut(s) 803, 845
BspTI CTTAAG 1 cut(s) 1061
BsrBI CCGCTC 2 cut(s) 946, 1156
BsrDI GCAATG 2 cut(s) 277, 306
BssECI CCNNGG 2 cut(s) 485, 828
BssMI GATC 8 cut(s) 78, 103, 168, 209, 364, 642, 759, 1008
BssT1I CCWWGG 2 cut(s) 485, 828
Bst4CI ACNGT 3 cut(s) 520, 571, 601
BstAFI CTTAAG 1 cut(s) 1061
BstC8I GCNNGC 3 cut(s) 91, 864, 898
BstDEI CTNAG 8 cut(s) 94, 312, 405, 450, 663, 811, 939, 949
BstDSI CCRYGG 1 cut(s) 485
BstF5I GGATG 1 cut(s) 981
BstKTI GATC 8 cut(s) 81, 106, 171, 212, 367, 645, 762, 1011
BstMAI GTCTC 2 cut(s) 122, 392
BstMBI GATC 8 cut(s) 78, 103, 168, 209, 364, 642, 759, 1008
BstMWI GCNNNNNNNGC 2 cut(s) 893, 1159
BstNSI RCATGY 2 cut(s) 135, 641
BstPAI GACNNNNGTC 2 cut(s) 425, 512
BstSCI CCNGG 2 cut(s) 974, 1033
BstV1I GCAGC 5 cut(s) 166, 607, 853, 896, 1084
BstX2I RGATCY 2 cut(s) 103, 209
BstYI RGATCY 2 cut(s) 103, 209
BsuRI GGCC 6 cut(s) 496, 727, 1033, 1046, 1107, 1169
BtgI CCRYGG 1 cut(s) 485
BtsCI GGATG 1 cut(s) 981
BtsIMutI CAGTG 3 cut(s) 525, 567, 957
BveI ACCTGC 1 cut(s) 904
Cac8I GCNNGC 3 cut(s) 91, 864, 898
Cfr13I GGNCC 3 cut(s) 725, 820, 978
CseI GACGC 1 cut(s) 266
Csp6I GTAC 2 cut(s) 526, 667
CspCI CAANNNNNGTGG 4 cut(s) 424, 459, 858, 893
CviQI GTAC 2 cut(s) 526, 667
DdeI CTNAG 8 cut(s) 94, 312, 405, 450, 663, 811, 939, 949
DpnI GATC 8 cut(s) 80, 105, 170, 211, 366, 644, 761, 1010
DpnII GATC 8 cut(s) 78, 103, 168, 209, 364, 642, 759, 1008
DrdI GACNNNNNNGTC 1 cut(s) 599
DseDI GACNNNNNNGTC 1 cut(s) 599
EaeI YGGCCR 2 cut(s) 1044, 1105
Ecl136II GAGCTC 1 cut(s) 409
Eco130I CCWWGG 2 cut(s) 485, 828
Eco147I AGGCCT 2 cut(s) 496, 1169
Eco24I GRGCYC 2 cut(s) 302, 411
Eco32I GATATC 1 cut(s) 997
Eco47I GGWCC 2 cut(s) 820, 978
Eco53kI GAGCTC 1 cut(s) 409
Eco57I CTGAAG 4 cut(s) 366, 480, 1012, 1063
EcoICRI GAGCTC 1 cut(s) 409
EcoO109I RGGNCCY 2 cut(s) 725, 820
EcoRV GATATC 1 cut(s) 997
EcoT14I CCWWGG 2 cut(s) 485, 828
EcoT38I GRGCYC 2 cut(s) 302, 411
ErhI CCWWGG 2 cut(s) 485, 828
FaqI GGGAC 3 cut(s) 384, 920, 991
FauNDI CATATG 1 cut(s) 375
FbaI TGATCA 3 cut(s) 364, 642, 1008
Fnu4HI GCNGC 7 cut(s) 180, 621, 867, 885, 944, 1098, 1154
FokI GGATG 1 cut(s) 968
FriOI GRGCYC 2 cut(s) 302, 411
Fsp4HI GCNGC 7 cut(s) 180, 621, 867, 885, 944, 1098, 1154
FspBI CTAG 2 cut(s) 431, 1171
GluI GCNGC 7 cut(s) 180, 621, 867, 885, 944, 1098, 1154
HaeIII GGCC 6 cut(s) 496, 727, 1033, 1046, 1107, 1169
HapII CCGG 2 cut(s) 975, 1034
HgaI GACGC 1 cut(s) 266
HincII GTYRAC 5 cut(s) 190, 283, 420, 835, 961
HindII GTYRAC 5 cut(s) 190, 283, 420, 835, 961
HindIII AAGCTT 3 cut(s) 53, 440, 452
HinfI GANTC 6 cut(s) 26, 400, 421, 550, 561, 891
HpaI GTTAAC 1 cut(s) 283
HpaII CCGG 2 cut(s) 975, 1034
HphI GGTGA 5 cut(s) 163, 176, 374, 595, 746
Hpy166II GTNNAC 6 cut(s) 190, 283, 420, 565, 835, 961
Hpy188I TCNGA 4 cut(s) 25, 73, 555, 722
Hpy188III TCNNGA 6 cut(s) 107, 254, 404, 813, 856, 1087
Hpy8I GTNNAC 6 cut(s) 190, 283, 420, 565, 835, 961
HpyAV CCTTC 3 cut(s) 32, 625, 817
HpyCH4III ACNGT 3 cut(s) 520, 571, 601
HpyCH4IV ACGT 1 cut(s) 8
HpyCH4V TGCA 5 cut(s) 135, 219, 270, 869, 913
HpyF10VI GCNNNNNNNGC 2 cut(s) 893, 1159
HpyF3I CTNAG 8 cut(s) 94, 312, 405, 450, 663, 811, 939, 949
HpySE526I ACGT 1 cut(s) 8
Ksp22I TGATCA 3 cut(s) 364, 642, 1008
KspAI GTTAAC 1 cut(s) 283
Kzo9I GATC 8 cut(s) 78, 103, 168, 209, 364, 642, 759, 1008
LmnI GCTCC 2 cut(s) 542, 634
Lsp1109I GCAGC 5 cut(s) 166, 607, 853, 896, 1084
LweI GCATC 3 cut(s) 64, 76, 727
MaeI CTAG 2 cut(s) 431, 1171
MaeII ACGT 1 cut(s) 8
MaeIII GTNAC 4 cut(s) 59, 514, 601, 1073
MalI GATC 8 cut(s) 80, 105, 170, 211, 366, 644, 761, 1010
MbiI CCGCTC 2 cut(s) 946, 1156
MboI GATC 8 cut(s) 78, 103, 168, 209, 364, 642, 759, 1008
MboII GAAGA 4 cut(s) 211, 359, 481, 769
MflI RGATCY 2 cut(s) 103, 209
MhlI GDGCHC 3 cut(s) 302, 411, 793
MlsI TGGCCA 2 cut(s) 1046, 1107
MluNI TGGCCA 2 cut(s) 1046, 1107
MlyI GAGTC 4 cut(s) 394, 415, 570, 885
Mox20I TGGCCA 2 cut(s) 1046, 1107
MscI TGGCCA 2 cut(s) 1046, 1107
MseI TTAA 3 cut(s) 282, 1050, 1062
MslI CAYNNNNRTG 2 cut(s) 152, 735
Msp20I TGGCCA 2 cut(s) 1046, 1107
MspA1I CMGCKG 2 cut(s) 179, 1097
MspCI CTTAAG 1 cut(s) 1061
MspI CCGG 2 cut(s) 975, 1034
MspR9I CCNGG 2 cut(s) 976, 1035
MwoI GCNNNNNNNGC 2 cut(s) 893, 1159
NciI CCSGG 2 cut(s) 976, 1035
NcoI CCATGG 1 cut(s) 485
NdeI CATATG 1 cut(s) 375
NdeII GATC 8 cut(s) 78, 103, 168, 209, 364, 642, 759, 1008
NlaIV GGNNCC 5 cut(s) 805, 822, 847, 979, 1085
NmuCI GTSAC 3 cut(s) 59, 514, 601
NspI RCATGY 2 cut(s) 135, 641
PceI AGGCCT 2 cut(s) 496, 1169
PfeI GAWTC 2 cut(s) 26, 550
PkrI GCNGC 7 cut(s) 181, 622, 868, 886, 945, 1099, 1155
PleI GAGTC 4 cut(s) 394, 415, 569, 885
PpsI GAGTC 4 cut(s) 394, 415, 569, 885
PpuMI RGGWCCY 1 cut(s) 820
PshAI GACNNNNGTC 2 cut(s) 425, 512
Psp124BI GAGCTC 1 cut(s) 411
Psp1406I AACGTT 1 cut(s) 8
Psp5II RGGWCCY 1 cut(s) 820
PspN4I GGNNCC 5 cut(s) 805, 822, 847, 979, 1085
PspPI GGNCC 3 cut(s) 725, 820, 978
PspPPI RGGWCCY 1 cut(s) 820
PsuI RGATCY 2 cut(s) 103, 209
RsaI GTAC 2 cut(s) 527, 668
RsaNI GTAC 2 cut(s) 526, 667
RseI CAYNNNNRTG 2 cut(s) 152, 735
SacI GAGCTC 1 cut(s) 411
SaqAI TTAA 3 cut(s) 282, 1050, 1062
SatI GCNGC 7 cut(s) 180, 621, 867, 885, 944, 1098, 1154
Sau3AI GATC 8 cut(s) 78, 103, 168, 209, 364, 642, 759, 1008
Sau96I GGNCC 3 cut(s) 725, 820, 978
SchI GAGTC 4 cut(s) 394, 415, 570, 885
ScrFI CCNGG 2 cut(s) 976, 1035
SduI GDGCHC 3 cut(s) 302, 411, 793
SfaNI GCATC 3 cut(s) 64, 76, 727
SinI GGWCC 2 cut(s) 820, 978
SmiMI CAYNNNNRTG 2 cut(s) 152, 735
SmlI CTYRAG 2 cut(s) 1061, 1157
SmoI CTYRAG 2 cut(s) 1061, 1157
SseBI AGGCCT 2 cut(s) 496, 1169
SsiI CCGC 5 cut(s) 177, 843, 944, 1095, 1154
SspMI CTAG 2 cut(s) 431, 1171
SstI GAGCTC 1 cut(s) 411
StuI AGGCCT 2 cut(s) 496, 1169
StyD4I CCNGG 2 cut(s) 974, 1033
StyI CCWWGG 2 cut(s) 485, 828
TaaI ACNGT 3 cut(s) 520, 571, 601
TaiI ACGT 1 cut(s) 11
TatI WGTACW 1 cut(s) 525
TauI GCSGC 2 cut(s) 946, 1156
TfiI GAWTC 2 cut(s) 26, 550
Tru1I TTAA 3 cut(s) 282, 1050, 1062
Tru9I TTAA 3 cut(s) 282, 1050, 1062
TscAI CASTG 3 cut(s) 525, 574, 957
TseFI GTSAC 3 cut(s) 59, 514, 601
TseI GCWGC 5 cut(s) 179, 620, 866, 884, 1097
Tsp45I GTSAC 3 cut(s) 59, 514, 601
TspDTI ATGAA 2 cut(s) 51, 311
TspGWI ACGGA 1 cut(s) 19
TspRI CASTG 3 cut(s) 525, 574, 957
Vha464I CTTAAG 1 cut(s) 1061
VpaK11BI GGWCC 2 cut(s) 820, 978
XceI RCATGY 2 cut(s) 135, 641
XcmI CCANNNNNNNNNTGG 2 cut(s) 145, 151
XspI CTAG 2 cut(s) 431, 1171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.