Rh3AG159100

Catalyzes the formation of S-adenosylmethionine from methionine and ATP

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Forward (+)
14613481 .. 14614653
1173 bp
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UTR
Exon/CDS
Intron
Rh3AG159100.1

Sequence Viewer

Length: 1173 bp
ATGGAGACCTTCCTCTTTACATCCGAATCTGTCAATGAGGGTCACCCCGACAAGCTCTGCGATCAAGTCTCGGATGCTATTCTCGATGCCTGCTTGGAACAGGACCCAGAGAGCAAAGTGGCATGCGAGACGTGTACAAAAACCAATATGGTCATGGTGTTTGGTGAAATCACAACCAAGGCTAAGGTAGACTACGAGAAGATTGTTCGAGACACATGCAGAGGAATTGGGTTTGTATCAGCAGATGTAGGCCTTGATGCTGACAAGTGCAAGGTCCTTGTCAACATTGAGGAACAAAGCCCCGAAATTGCGCAAGGGGTTCACGGCCATTTCACCAAGAAGCCTGAGGAAATCGGAGCCGGTGACCAAGGCCACATGTTTGGTTATGCCACAGATGAAACACCTGAGCTCATGCCTTTAACTCATGTCCTTTCTACTAAGCTTGGTGCCAAGCTCACTGAGGTCAGGAAGAACAAAACCGTCCCGTGGTTGAGGCCTGATGGTAAGACCCAAGTGACTGTTGAGTACAGAAATGATAACGGAGCCATGGTCCCTCTTCGGGTGCACACTATCCTTATCTCAACCCAACATGATGAGACTGTCACAAATGAGCAGATTGCTGCTGATTTGAAGGAACATGTGATCAAACCTGTTGTCCCAGCCCAGTACATTGATGACAAAACCATTTATCACCTCAACCCTTCGGGACGTTTTGTCATCGGAGGACCCCATGGAGATGCTGGCCTTACTGGTCGAAAGATCATTATAGATACCTATGGTGGTTGGGGTGCACATGGTGGTGGTGCTTTCTCGGGTAAGGATCCTACCAAGGTGGACCGAAGTGGAGCATACATTGTAAGGCAGGCAGCAAAGAGTGTGGTGGCGTCTGGCCTTGCTCGCCGATGCATTGTTCAGGTTTCGTACGCAATCGGTGTCCCTGATCCACTATCAGTGTTTGTGGATACCTACAAAACAGGCAAAATCCCAGACAAGGACATACTGGCTCTTATTAAGGAAAATTTTGACTTCAGGCCAGGAATGATTGCACTCAACCTTGATATGAAAAGGGGAGGCAACTTCAGGTATCTGAAGACTGCAGCTTATGGACACTTTGGCCGCGATGACCCAGATTTCACTTGGGAAACCGTAAAGCACCTCAAGCCAAATGCTTAA

Protein Analysis

390

Amino Acids

42.76

Weight (kDa)

6.02

Isoelectric Point (pI)

23.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S-AdoMet_synt_N PF00438 4 - 101 4.1e-43 S-adenosylmethionine synthetase, N-terminal domain
S-AdoMet_synt_M PF02772 117 - 238 6.7e-48 S-adenosylmethionine synthetase, central domain
S-AdoMet_synt_C PF02773 240 - 381 3.9e-60 S-adenosylmethionine synthetase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010678)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 312
AccB1I GGYRCC 1 cut(s) 446
AccI GTMKAC 1 cut(s) 189
AccII CGCG 1 cut(s) 1119
AciI CCGC 1 cut(s) 1117
AclWI GGATC 3 cut(s) 815, 828, 935
AcoI YGGCCR 2 cut(s) 325, 1114
AcsI RAATTY 1 cut(s) 1018
AcuI CTGAAG 3 cut(s) 1012, 1063, 1109
AcyI GRCGYC 1 cut(s) 884
AdeI CACNNNGTG 1 cut(s) 797
AfaI GTAC 4 cut(s) 136, 527, 668, 923
AfiI CCNNNNNNNGG 3 cut(s) 486, 559, 991
AflIII ACRYGT 3 cut(s) 131, 375, 637
AgsI TTSAA 1 cut(s) 631
AhdI GACNNNNNGTC 1 cut(s) 713
AjiI CACGTC 1 cut(s) 132
AjnI CCWGG 1 cut(s) 1033
AluBI AGCT 5 cut(s) 55, 409, 442, 454, 1100
AluI AGCT 5 cut(s) 55, 409, 442, 454, 1100
Alw21I GWGCWC 3 cut(s) 411, 567, 793
Alw26I GTCTC 4 cut(s) 73, 122, 204, 590
Alw44I GTGCAC 2 cut(s) 563, 789
AlwI GGATC 3 cut(s) 815, 828, 935
Ama87I CYCGRG 1 cut(s) 811
AoxI GGCC 8 cut(s) 250, 325, 370, 494, 742, 889, 1031, 1114
ApaLI GTGCAC 2 cut(s) 563, 789
ApeKI GCWGC 3 cut(s) 620, 866, 1097
ApoI RAATTY 1 cut(s) 1018
ArsI GACNNNNNNTTYG 2 cut(s) 639, 671
AspLEI GCGC 1 cut(s) 313
AspS9I GGNCC 5 cut(s) 103, 274, 550, 725, 835
AsuHPI GGTGA 5 cut(s) 35, 176, 325, 374, 683
AvaI CYCGRG 1 cut(s) 811
AvaII GGWCC 5 cut(s) 103, 274, 550, 725, 835
AxyI CCTNAGG 1 cut(s) 345
BaeGI GKGCMC 2 cut(s) 567, 793
BamHI GGATCC 1 cut(s) 820
BanI GGYRCC 1 cut(s) 446
BanII GRGCYC 1 cut(s) 411
BbsI GAAGAC 1 cut(s) 1097
Bbv12I GWGCWC 3 cut(s) 411, 567, 793
BbvI GCAGC 3 cut(s) 607, 878, 1109
BccI CCATC 1 cut(s) 494
BceAI ACGGC 1 cut(s) 340
BcgI CGANNNNNNTGC 2 cut(s) 198, 232
BciT130I CCWGG 1 cut(s) 1035
BciVI GTATCC 1 cut(s) 955
BclI TGATCA 1 cut(s) 642
BcoDI GTCTC 4 cut(s) 73, 122, 204, 590
BfmI CTRYAG 1 cut(s) 1095
BfuI GTATCC 1 cut(s) 955
BisI GCNGC 4 cut(s) 621, 867, 1098, 1117
BlsI GCNGC 4 cut(s) 622, 868, 1099, 1118
Bme1390I CCNGG 1 cut(s) 1035
Bme18I GGWCC 5 cut(s) 103, 274, 550, 725, 835
BmeRI GACNNNNNGTC 1 cut(s) 713
BmeT110I CYCGRG 1 cut(s) 811
BmgBI CACGTC 1 cut(s) 132
BmgT120I GGNCC 5 cut(s) 103, 274, 550, 725, 835
BmiI GGNNCC 7 cut(s) 105, 358, 448, 544, 552, 727, 822
BmrFI CCNGG 1 cut(s) 1035
BmrI ACTGGG 1 cut(s) 658
BmsI GCATC 5 cut(s) 64, 76, 247, 727, 893
BmuI ACTGGG 1 cut(s) 658
BpiI GAAGAC 1 cut(s) 1097
Bpu10I CCTNAGC 2 cut(s) 183, 405
BpuEI CTTGAG 1 cut(s) 1142
BsaHI GRCGYC 1 cut(s) 884
BsaJI CCNNGG 6 cut(s) 177, 367, 485, 546, 730, 828
BsaXI ACNNNNNCTCC 2 cut(s) 534, 564
Bsc4I CCNNNNNNNGG 3 cut(s) 486, 559, 991
Bse118I RCCGGY 1 cut(s) 359
Bse1I ACTGG 3 cut(s) 664, 754, 1005
Bse21I CCTNAGG 1 cut(s) 345
BseBI CCWGG 1 cut(s) 1035
BseDI CCNNGG 6 cut(s) 177, 367, 485, 546, 730, 828
BseGI GGATG 2 cut(s) 20, 79
BseLI CCNNNNNNNGG 3 cut(s) 486, 559, 991
BseMII CTCAG 3 cut(s) 336, 396, 450
BseNI ACTGG 3 cut(s) 664, 754, 1005
BseSI GKGCMC 2 cut(s) 567, 793
BseXI GCAGC 3 cut(s) 607, 878, 1109
BseYI CCCAGC 1 cut(s) 658
Bsh1236I CGCG 1 cut(s) 1119
BshFI GGCC 8 cut(s) 252, 327, 372, 496, 744, 891, 1033, 1116
BshNI GGYRCC 1 cut(s) 446
BsiHKAI GWGCWC 3 cut(s) 411, 567, 793
BsiHKCI CYCGRG 1 cut(s) 811
BsiSI CCGG 1 cut(s) 360
BsiWI CGTACG 1 cut(s) 921
BslFI GGGAC 5 cut(s) 467, 536, 641, 720, 920
BslI CCNNNNNNNGG 3 cut(s) 486, 559, 991
BsmAI GTCTC 4 cut(s) 73, 122, 204, 590
BsmBI CGTCTC 1 cut(s) 122
BsmFI GGGAC 5 cut(s) 467, 536, 641, 720, 920
BsnI GGCC 8 cut(s) 252, 327, 372, 496, 744, 891, 1033, 1116
BsoBI CYCGRG 1 cut(s) 811
Bsp1286I GDGCHC 3 cut(s) 411, 567, 793
Bsp1407I TGTACA 1 cut(s) 134
Bsp143I GATC 5 cut(s) 61, 642, 759, 820, 940
Bsp19I CCATGG 2 cut(s) 546, 730
BspACI CCGC 1 cut(s) 1117
BspANI GGCC 8 cut(s) 252, 327, 372, 496, 744, 891, 1033, 1116
BspCNI CTCAG 3 cut(s) 337, 397, 451
BspFNI CGCG 1 cut(s) 1119
BspLI GGNNCC 7 cut(s) 105, 358, 448, 544, 552, 727, 822
BspMAI CTGCAG 1 cut(s) 1099
BspPI GGATC 3 cut(s) 815, 828, 935
BspT107I GGYRCC 1 cut(s) 446
BsrFI RCCGGY 1 cut(s) 359
BsrGI TGTACA 1 cut(s) 134
BsrI ACTGG 3 cut(s) 664, 754, 1005
BssAI RCCGGY 1 cut(s) 359
BssECI CCNNGG 6 cut(s) 177, 367, 485, 546, 730, 828
BssMI GATC 5 cut(s) 61, 642, 759, 820, 940
BssNI GRCGYC 1 cut(s) 884
BssT1I CCWWGG 5 cut(s) 177, 367, 546, 730, 828
Bst2UI CCWGG 1 cut(s) 1035
Bst4CI ACNGT 4 cut(s) 481, 520, 601, 1147
Bst6I CTCTTC 1 cut(s) 561
BstACI GRCGYC 1 cut(s) 884
BstAUI TGTACA 1 cut(s) 134
BstC8I GCNNGC 5 cut(s) 91, 124, 742, 864, 898
BstDEI CTNAG 5 cut(s) 183, 345, 405, 438, 459
BstDSI CCRYGG 3 cut(s) 485, 546, 730
BstEII GGTNACC 2 cut(s) 41, 362
BstF5I GGATG 2 cut(s) 20, 79
BstFNI CGCG 1 cut(s) 1119
BstHHI GCGC 1 cut(s) 313
BstKTI GATC 5 cut(s) 64, 645, 762, 823, 943
BstMAI GTCTC 4 cut(s) 73, 122, 204, 590
BstMBI GATC 5 cut(s) 61, 642, 759, 820, 940
BstMWI GCNNNNNNNGC 2 cut(s) 897, 1159
BstNI CCWGG 1 cut(s) 1035
BstNSI RCATGY 4 cut(s) 126, 219, 379, 641
BstPI GGTNACC 2 cut(s) 41, 362
BstSCI CCNGG 1 cut(s) 1033
BstSFI CTRYAG 1 cut(s) 1095
BstSLI GKGCMC 2 cut(s) 567, 793
BstUI CGCG 1 cut(s) 1119
BstV1I GCAGC 3 cut(s) 607, 878, 1109
BstV2I GAAGAC 1 cut(s) 1097
BstX2I RGATCY 1 cut(s) 820
BstXI CCANNNNNNTGG 1 cut(s) 380
BstYI RGATCY 1 cut(s) 820
Bsu36I CCTNAGG 1 cut(s) 345
BsuI GTATCC 1 cut(s) 955
BsuRI GGCC 8 cut(s) 252, 327, 372, 496, 744, 891, 1033, 1116
BtgI CCRYGG 3 cut(s) 485, 546, 730
BtgZI GCGATG 1 cut(s) 1134
BtrI CACGTC 1 cut(s) 132
BtsCI GGATG 2 cut(s) 20, 79
BtsIMutI CAGTG 2 cut(s) 456, 957
Cac8I GCNNGC 5 cut(s) 91, 124, 742, 864, 898
CfoI GCGC 1 cut(s) 313
Cfr10I RCCGGY 1 cut(s) 359
Cfr13I GGNCC 5 cut(s) 103, 274, 550, 725, 835
CseI GACGC 1 cut(s) 873
Csp6I GTAC 4 cut(s) 135, 526, 667, 922
CspCI CAANNNNNGTGG 2 cut(s) 858, 893
CviQI GTAC 4 cut(s) 135, 526, 667, 922
DdeI CTNAG 5 cut(s) 183, 345, 405, 438, 459
DpnI GATC 5 cut(s) 63, 644, 761, 822, 942
DpnII GATC 5 cut(s) 61, 642, 759, 820, 940
DraIII CACNNNGTG 1 cut(s) 797
DriI GACNNNNNGTC 1 cut(s) 713
EaeI YGGCCR 2 cut(s) 325, 1114
Eam1104I CTCTTC 1 cut(s) 561
Eam1105I GACNNNNNGTC 1 cut(s) 713
EarI CTCTTC 1 cut(s) 561
Ecl136II GAGCTC 1 cut(s) 409
Eco130I CCWWGG 5 cut(s) 177, 367, 546, 730, 828
Eco147I AGGCCT 2 cut(s) 252, 496
Eco24I GRGCYC 1 cut(s) 411
Eco47I GGWCC 5 cut(s) 103, 274, 550, 725, 835
Eco53kI GAGCTC 1 cut(s) 409
Eco57I CTGAAG 3 cut(s) 1012, 1063, 1109
Eco81I CCTNAGG 1 cut(s) 345
Eco88I CYCGRG 1 cut(s) 811
Eco91I GGTNACC 2 cut(s) 41, 362
EcoICRI GAGCTC 1 cut(s) 409
EcoO109I RGGNCCY 3 cut(s) 103, 274, 725
EcoO65I GGTNACC 2 cut(s) 41, 362
EcoRII CCWGG 1 cut(s) 1033
EcoT14I CCWWGG 5 cut(s) 177, 367, 546, 730, 828
EcoT22I ATGCAT 1 cut(s) 908
EcoT38I GRGCYC 1 cut(s) 411
ErhI CCWWGG 5 cut(s) 177, 367, 546, 730, 828
Esp3I CGTCTC 1 cut(s) 122
FaqI GGGAC 5 cut(s) 467, 536, 641, 720, 920
FbaI TGATCA 1 cut(s) 642
FblI GTMKAC 1 cut(s) 189
Fnu4HI GCNGC 4 cut(s) 621, 867, 1098, 1117
FokI GGATG 2 cut(s) 7, 86
FriOI GRGCYC 1 cut(s) 411
Fsp4HI GCNGC 4 cut(s) 621, 867, 1098, 1117
FspI TGCGCA 1 cut(s) 312
GlaI GCGC 1 cut(s) 312
GluI GCNGC 4 cut(s) 621, 867, 1098, 1117
GsaI CCCAGC 1 cut(s) 662
HaeIII GGCC 8 cut(s) 252, 327, 372, 496, 744, 891, 1033, 1116
HapII CCGG 1 cut(s) 360
HgaI GACGC 1 cut(s) 873
HhaI GCGC 1 cut(s) 313
Hin1I GRCGYC 1 cut(s) 884
Hin6I GCGC 1 cut(s) 311
HinP1I GCGC 1 cut(s) 311
HincII GTYRAC 1 cut(s) 283
HindII GTYRAC 1 cut(s) 283
HindIII AAGCTT 1 cut(s) 440
HinfI GANTC 1 cut(s) 26
HpaII CCGG 1 cut(s) 360
HphI GGTGA 5 cut(s) 35, 176, 325, 374, 683
Hpy166II GTNNAC 7 cut(s) 135, 190, 283, 322, 565, 791, 835
Hpy188I TCNGA 5 cut(s) 25, 73, 356, 722, 1089
Hpy188III TCNNGA 4 cut(s) 83, 209, 466, 705
Hpy8I GTNNAC 7 cut(s) 135, 190, 283, 322, 565, 791, 835
HpyAV CCTTC 3 cut(s) 19, 625, 711
HpyCH4III ACNGT 4 cut(s) 481, 520, 601, 1147
HpyCH4IV ACGT 2 cut(s) 131, 709
HpyCH4V TGCA 7 cut(s) 219, 270, 565, 791, 906, 1046, 1097
HpyF10VI GCNNNNNNNGC 2 cut(s) 897, 1159
HpyF3I CTNAG 5 cut(s) 183, 345, 405, 438, 459
HpySE526I ACGT 2 cut(s) 131, 709
Hsp92I GRCGYC 1 cut(s) 884
HspAI GCGC 1 cut(s) 311
Ksp22I TGATCA 1 cut(s) 642
Kzo9I GATC 5 cut(s) 61, 642, 759, 820, 940
LmnI GCTCC 3 cut(s) 356, 542, 845
Lsp1109I GCAGC 3 cut(s) 607, 878, 1109
LweI GCATC 5 cut(s) 64, 76, 247, 727, 893
MaeII ACGT 2 cut(s) 131, 709
MaeIII GTNAC 4 cut(s) 41, 362, 514, 601
MalI GATC 5 cut(s) 63, 644, 761, 822, 942
MboI GATC 5 cut(s) 61, 642, 759, 820, 940
MboII GAAGA 4 cut(s) 211, 481, 548, 1102
MflI RGATCY 1 cut(s) 820
MhlI GDGCHC 3 cut(s) 411, 567, 793
MluCI AATT 3 cut(s) 225, 306, 1018
Mph1103I ATGCAT 1 cut(s) 908
MseI TTAA 3 cut(s) 419, 1011, 1171
MslI CAYNNNNRTG 2 cut(s) 735, 798
MspI CCGG 1 cut(s) 360
MspR9I CCNGG 1 cut(s) 1035
MvaI CCWGG 1 cut(s) 1035
MvnI CGCG 1 cut(s) 1119
MwoI GCNNNNNNNGC 2 cut(s) 897, 1159
NcoI CCATGG 2 cut(s) 546, 730
NdeII GATC 5 cut(s) 61, 642, 759, 820, 940
NlaIV GGNNCC 7 cut(s) 105, 358, 448, 544, 552, 727, 822
NmuCI GTSAC 4 cut(s) 41, 362, 514, 601
NsbI TGCGCA 1 cut(s) 312
NsiI ATGCAT 1 cut(s) 908
NspI RCATGY 4 cut(s) 126, 219, 379, 641
PaeI GCATGC 1 cut(s) 126
PceI AGGCCT 2 cut(s) 252, 496
PciI ACATGT 2 cut(s) 375, 637
PfeI GAWTC 1 cut(s) 26
Pfl23II CGTACG 1 cut(s) 921
PkrI GCNGC 4 cut(s) 622, 868, 1099, 1118
PpuMI RGGWCCY 3 cut(s) 103, 274, 725
PscI ACATGT 2 cut(s) 375, 637
Psp124BI GAGCTC 1 cut(s) 411
Psp5II RGGWCCY 3 cut(s) 103, 274, 725
Psp6I CCWGG 1 cut(s) 1033
PspEI GGTNACC 2 cut(s) 41, 362
PspFI CCCAGC 1 cut(s) 658
PspGI CCWGG 1 cut(s) 1033
PspLI CGTACG 1 cut(s) 921
PspN4I GGNNCC 7 cut(s) 105, 358, 448, 544, 552, 727, 822
PspPI GGNCC 5 cut(s) 103, 274, 550, 725, 835
PspPPI RGGWCCY 3 cut(s) 103, 274, 725
PstI CTGCAG 1 cut(s) 1099
PsuI RGATCY 1 cut(s) 820
RsaI GTAC 4 cut(s) 136, 527, 668, 923
RsaNI GTAC 4 cut(s) 135, 526, 667, 922
RseI CAYNNNNRTG 2 cut(s) 735, 798
SacI GAGCTC 1 cut(s) 411
SaqAI TTAA 3 cut(s) 419, 1011, 1171
SatI GCNGC 4 cut(s) 621, 867, 1098, 1117
Sau3AI GATC 5 cut(s) 61, 642, 759, 820, 940
Sau96I GGNCC 5 cut(s) 103, 274, 550, 725, 835
ScrFI CCNGG 1 cut(s) 1035
SduI GDGCHC 3 cut(s) 411, 567, 793
SfaNI GCATC 5 cut(s) 64, 76, 247, 727, 893
SfcI CTRYAG 1 cut(s) 1095
SinI GGWCC 5 cut(s) 103, 274, 550, 725, 835
SmiMI CAYNNNNRTG 2 cut(s) 735, 798
SmlI CTYRAG 1 cut(s) 1157
SmoI CTYRAG 1 cut(s) 1157
SphI GCATGC 1 cut(s) 126
Sse9I AATT 3 cut(s) 225, 306, 1018
SseBI AGGCCT 2 cut(s) 252, 496
SsiI CCGC 1 cut(s) 1117
SstI GAGCTC 1 cut(s) 411
StuI AGGCCT 2 cut(s) 252, 496
StyD4I CCNGG 1 cut(s) 1033
StyI CCWWGG 5 cut(s) 177, 367, 546, 730, 828
TaaI ACNGT 4 cut(s) 481, 520, 601, 1147
TaiI ACGT 2 cut(s) 134, 712
TaqI TCGA 3 cut(s) 84, 208, 754
TaqII GACCGA 1 cut(s) 852
TasI AATT 3 cut(s) 225, 306, 1018
TatI WGTACW 3 cut(s) 134, 525, 666
TauI GCSGC 1 cut(s) 1119
TfiI GAWTC 1 cut(s) 26
Tru1I TTAA 3 cut(s) 419, 1011, 1171
Tru9I TTAA 3 cut(s) 419, 1011, 1171
TscAI CASTG 2 cut(s) 463, 957
TseFI GTSAC 4 cut(s) 41, 362, 514, 601
TseI GCWGC 3 cut(s) 620, 866, 1097
Tsp45I GTSAC 4 cut(s) 41, 362, 514, 601
TspDTI ATGAA 2 cut(s) 411, 1076
TspGWI ACGGA 1 cut(s) 555
TspRI CASTG 2 cut(s) 463, 957
VneI GTGCAC 2 cut(s) 563, 789
VpaK11BI GGWCC 5 cut(s) 103, 274, 550, 725, 835
XapI RAATTY 1 cut(s) 1018
XceI RCATGY 4 cut(s) 126, 219, 379, 641
XcmI CCANNNNNNNNNTGG 3 cut(s) 151, 737, 1134
XmiI GTMKAC 1 cut(s) 189
Zsp2I ATGCAT 1 cut(s) 908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.