MD12G1109900.v1.1

Catalyzes the formation of S-adenosylmethionine from methionine and ATP

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Reverse (-)
17402034 .. 17403895
1862 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1109900.v1.1.491

Sequence Viewer

Length: 1272 bp
ATGAATACCACTCTCCAATCTCCGCATCCCTCTCTTTCATTTTTTCAAGTCTCTCTCATCCTTCCTCCTCCTCTCTCGCTCTCACATTCACAGGTTCAGATGGAAACCTTCCTCTTCACCTCCGAATCCGTCAATGAGGGACACCCCGACAAGCTCTGCGACCAAGTCTCAGATGCCGTTCTCGATGCTTGCTTGGAACAAGACCCCGAGAGCAAAGTTGCATGCGAGACATGTACGAAAACCAACATGGTCATGGTCTTAGGTGAGATCACAACCAAAGCGAAAGTAGATTACGAGAAAATAGTCCGAGATACTTGCAGAGGAATAGGGTTTACATCCGCTGATGTAGGCCTTGACGCTGACAACTGCAAAGTCCTCGTCAACATTGAGAAGCAAAGCCCTGAAATTGCAGAGGGAGTTCATGGACACCTTACCAAGAAGCCCGAGGAAATTGGAGCCGGCGATCAAGGCCACATGTTTGGTTACGCCACAGATGAAACACCTGAGTTCATGCCACTCACCCATGTCCTTGCTACAAAGATTGGCGCCAAGCTTACGGAGGTCAGAAAGAATAAAACAGTTCCATGGTTGAGGCCCGATGGTAAGACCCAAGTGACTGTTGAGTACAAGAATGAGAATGGGGCCATGGTCCCGATTCGGGTGCACACCATCCTCATCTCAACCCAACATGATGAGAATGTCACAAACGAGCAGATTGCTGCTGATTTGAAGGAACATGTGATCAAACCTGTCGTCCCCGCCCAATTCATTGATGACAAAATTATCTACCACTTGAACCCTTCAGGTCGATTCGTCATTGGAGGACCCCATGGAGACGCCGGTCTCACTGGCCGGAAGATAATCATAGACACCTATGGTGGTTGGGGTGCTCATGGTGGTGGTGCTTTCTCTGGAAAAGATCCAACCAAGGTTGACCGGAGTGGCGCGTACATTGTAAGGCAGGCAGCAAAAAGTGTTGTAGCATCCGGGCTTGCTCGCCGCTGTATTGTTCAGGTTTCTTATGCTATTGGCGTTCCAGAACCCCTATCGGTTTTCGTGGATACCTACAAAACTGGAAAAATCCCAGACAAGGACATATTGGTTCTCATCAAGGAGAACTTTGACTTTAGGCCGGGAATGATTGCCATCGACCTTGATTTGAAAAGAGGGGGCAACCTCAGGTACCAAAAGACCGCTGCTTATGGTCATTTTGGCCGCGATGATCCAGATTTCACATGGGAGACCGTCAAGATCCTCAAGCCAAAAGCGTGA

Protein Analysis

424

Amino Acids

46.29

Weight (kDa)

6.07

Isoelectric Point (pI)

27.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S-AdoMet_synt_N PF00438 37 - 134 3.6e-43 S-adenosylmethionine synthetase, N-terminal domain
S-AdoMet_synt_M PF02772 150 - 271 1.2e-47 S-adenosylmethionine synthetase, central domain
S-AdoMet_synt_C PF02773 273 - 414 6.6e-61 S-adenosylmethionine synthetase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010678)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1182
AccB1I GGYRCC 2 cut(s) 545, 1182
AccII CGCG 2 cut(s) 947, 1218
AciI CCGC 6 cut(s) 23, 339, 759, 1000, 1194, 1216
AclWI GGATC 3 cut(s) 914, 1217, 1246
AcoI YGGCCR 2 cut(s) 850, 1213
AcuI CTGAAG 1 cut(s) 786
AcyI GRCGYC 2 cut(s) 546, 837
AfaI GTAC 4 cut(s) 235, 626, 950, 1184
AfiI CCNNNNNNNGG 2 cut(s) 658, 1090
AflIII ACRYGT 3 cut(s) 230, 474, 736
AgsI TTSAA 4 cut(s) 47, 730, 796, 1162
AluBI AGCT 2 cut(s) 154, 553
AluI AGCT 2 cut(s) 154, 553
Alw21I GWGCWC 2 cut(s) 666, 892
Alw26I GTCTC 6 cut(s) 55, 172, 221, 828, 848, 1235
Alw44I GTGCAC 1 cut(s) 662
AlwI GGATC 3 cut(s) 914, 1217, 1246
Ama87I CYCGRG 2 cut(s) 206, 443
AoxI GGCC 7 cut(s) 349, 469, 593, 642, 850, 1130, 1213
ApaLI GTGCAC 1 cut(s) 662
ApeKI GCWGC 3 cut(s) 719, 965, 1196
ArsI GACNNNNNNTTYG 4 cut(s) 363, 395, 738, 770
Asp718I GGTACC 1 cut(s) 1182
AspLEI GCGC 2 cut(s) 548, 947
AspS9I GGNCC 4 cut(s) 594, 642, 649, 824
AsuC2I CCSGG 2 cut(s) 988, 1134
AsuHPI GGTGA 3 cut(s) 109, 275, 511
AvaI CYCGRG 2 cut(s) 206, 443
AvaII GGWCC 2 cut(s) 649, 824
AxyI CCTNAGG 1 cut(s) 1178
BaeGI GKGCMC 1 cut(s) 666
BanI GGYRCC 2 cut(s) 545, 1182
Bbv12I GWGCWC 2 cut(s) 666, 892
BbvI GCAGC 3 cut(s) 706, 977, 1183
BccI CCATC 4 cut(s) 94, 593, 677, 1154
BceAI ACGGC 1 cut(s) 161
BcgI CGANNNNNNTGC 8 cut(s) 297, 331, 358, 392, 643, 677, 698, 732
BciVI GTATCC 1 cut(s) 1054
BclI TGATCA 1 cut(s) 741
BcnI CCSGG 2 cut(s) 988, 1134
BcoDI GTCTC 6 cut(s) 55, 172, 221, 828, 848, 1235
BfoI RGCGCY 1 cut(s) 549
BfuI GTATCC 1 cut(s) 1054
BisI GCNGC 5 cut(s) 720, 966, 1000, 1197, 1216
BlsI GCNGC 5 cut(s) 721, 967, 1001, 1198, 1217
Bme1390I CCNGG 2 cut(s) 988, 1134
Bme18I GGWCC 2 cut(s) 649, 824
BmeT110I CYCGRG 2 cut(s) 206, 443
BmgT120I GGNCC 4 cut(s) 594, 642, 649, 824
BmiI GGNNCC 6 cut(s) 457, 547, 643, 651, 826, 1184
BmrFI CCNGG 2 cut(s) 988, 1134
BmsI GCATC 4 cut(s) 34, 163, 175, 992
BoxI GACNNNNGTC 1 cut(s) 840
BpuEI CTTGAG 1 cut(s) 1241
BpuMI CCSGG 2 cut(s) 988, 1134
BsaBI GATNNNNATC 1 cut(s) 1145
BsaHI GRCGYC 2 cut(s) 546, 837
BsaI GGTCTC 2 cut(s) 848, 1235
BsaJI CCNNGG 5 cut(s) 444, 584, 645, 829, 927
BsaWI WCCGGW 1 cut(s) 936
Bsc4I CCNNNNNNNGG 2 cut(s) 658, 1090
Bse118I RCCGGY 2 cut(s) 458, 839
Bse1I ACTGG 2 cut(s) 853, 1078
Bse21I CCTNAGG 1 cut(s) 1178
Bse8I GATNNNNATC 1 cut(s) 1145
BseDI CCNNGG 5 cut(s) 444, 584, 645, 829, 927
BseGI GGATG 5 cut(s) 25, 57, 335, 669, 983
BseJI GATNNNNATC 1 cut(s) 1145
BseLI CCNNNNNNNGG 2 cut(s) 658, 1090
BseMII CTCAG 3 cut(s) 183, 495, 1192
BseNI ACTGG 2 cut(s) 853, 1078
BseRI GAGGAG 2 cut(s) 57, 60
BseSI GKGCMC 1 cut(s) 666
BseXI GCAGC 3 cut(s) 706, 977, 1183
Bsh1236I CGCG 2 cut(s) 947, 1218
BshFI GGCC 7 cut(s) 351, 471, 595, 644, 852, 1132, 1215
BshNI GGYRCC 2 cut(s) 545, 1182
BsiHKAI GWGCWC 2 cut(s) 666, 892
BsiHKCI CYCGRG 2 cut(s) 206, 443
BsiSI CCGG 6 cut(s) 459, 840, 853, 937, 987, 1133
BslFI GGGAC 3 cut(s) 153, 635, 740
BslI CCNNNNNNNGG 2 cut(s) 658, 1090
BsmAI GTCTC 6 cut(s) 55, 172, 221, 828, 848, 1235
BsmBI CGTCTC 1 cut(s) 828
BsmFI GGGAC 3 cut(s) 153, 635, 740
BsnI GGCC 7 cut(s) 351, 471, 595, 644, 852, 1132, 1215
Bso31I GGTCTC 2 cut(s) 848, 1235
BsoBI CYCGRG 2 cut(s) 206, 443
Bsp1286I GDGCHC 2 cut(s) 666, 892
Bsp143I GATC 6 cut(s) 267, 463, 741, 919, 1222, 1251
Bsp19I CCATGG 3 cut(s) 584, 645, 829
BspACI CCGC 6 cut(s) 23, 339, 759, 1000, 1194, 1216
BspANI GGCC 7 cut(s) 351, 471, 595, 644, 852, 1132, 1215
BspCNI CTCAG 3 cut(s) 182, 496, 1191
BspFNI CGCG 2 cut(s) 947, 1218
BspLI GGNNCC 6 cut(s) 457, 547, 643, 651, 826, 1184
BspPI GGATC 3 cut(s) 914, 1217, 1246
BspT107I GGYRCC 2 cut(s) 545, 1182
BspTNI GGTCTC 2 cut(s) 848, 1235
BsrFI RCCGGY 2 cut(s) 458, 839
BsrI ACTGG 2 cut(s) 853, 1078
BssAI RCCGGY 2 cut(s) 458, 839
BssECI CCNNGG 5 cut(s) 444, 584, 645, 829, 927
BssMI GATC 6 cut(s) 267, 463, 741, 919, 1222, 1251
BssNI GRCGYC 2 cut(s) 546, 837
BssT1I CCWWGG 4 cut(s) 584, 645, 829, 927
Bst4CI ACNGT 3 cut(s) 580, 619, 1246
Bst6I CTCTTC 1 cut(s) 119
BstACI GRCGYC 2 cut(s) 546, 837
BstC8I GCNNGC 6 cut(s) 190, 223, 460, 963, 993, 997
BstDEI CTNAG 4 cut(s) 169, 259, 504, 1178
BstDSI CCRYGG 3 cut(s) 584, 645, 829
BstF5I GGATG 5 cut(s) 25, 57, 335, 669, 983
BstFNI CGCG 2 cut(s) 947, 1218
BstH2I RGCGCY 1 cut(s) 549
BstHHI GCGC 2 cut(s) 548, 947
BstKTI GATC 6 cut(s) 270, 466, 744, 922, 1225, 1254
BstMAI GTCTC 6 cut(s) 55, 172, 221, 828, 848, 1235
BstMBI GATC 6 cut(s) 267, 463, 741, 919, 1222, 1251
BstMWI GCNNNNNNNGC 1 cut(s) 468
BstNSI RCATGY 4 cut(s) 225, 234, 478, 740
BstPAI GACNNNNGTC 1 cut(s) 840
BstSCI CCNGG 2 cut(s) 986, 1132
BstSLI GKGCMC 1 cut(s) 666
BstUI CGCG 2 cut(s) 947, 1218
BstV1I GCAGC 3 cut(s) 706, 977, 1183
BstX2I RGATCY 2 cut(s) 919, 1251
BstXI CCANNNNNNTGG 1 cut(s) 479
BstYI RGATCY 2 cut(s) 919, 1251
Bsu36I CCTNAGG 1 cut(s) 1178
BsuI GTATCC 1 cut(s) 1054
BsuRI GGCC 7 cut(s) 351, 471, 595, 644, 852, 1132, 1215
BtgI CCRYGG 3 cut(s) 584, 645, 829
BtgZI GCGATG 1 cut(s) 1233
BtsCI GGATG 5 cut(s) 25, 57, 335, 669, 983
BtsIMutI CAGTG 1 cut(s) 846
Cac8I GCNNGC 6 cut(s) 190, 223, 460, 963, 993, 997
CfoI GCGC 2 cut(s) 548, 947
Cfr10I RCCGGY 2 cut(s) 458, 839
Cfr13I GGNCC 4 cut(s) 594, 642, 649, 824
CseI GACGC 2 cut(s) 365, 845
Csp6I GTAC 4 cut(s) 234, 625, 949, 1183
CviQI GTAC 4 cut(s) 234, 625, 949, 1183
DdeI CTNAG 4 cut(s) 169, 259, 504, 1178
DinI GGCGCC 1 cut(s) 547
DpnI GATC 6 cut(s) 269, 465, 743, 921, 1224, 1253
DpnII GATC 6 cut(s) 267, 463, 741, 919, 1222, 1251
EaeI YGGCCR 2 cut(s) 850, 1213
Eam1104I CTCTTC 1 cut(s) 119
EarI CTCTTC 1 cut(s) 119
Eco130I CCWWGG 4 cut(s) 584, 645, 829, 927
Eco147I AGGCCT 1 cut(s) 351
Eco31I GGTCTC 2 cut(s) 848, 1235
Eco47I GGWCC 2 cut(s) 649, 824
Eco57I CTGAAG 1 cut(s) 786
Eco81I CCTNAGG 1 cut(s) 1178
Eco88I CYCGRG 2 cut(s) 206, 443
EcoO109I RGGNCCY 1 cut(s) 824
EcoT14I CCWWGG 4 cut(s) 584, 645, 829, 927
EgeI GGCGCC 1 cut(s) 547
EheI GGCGCC 1 cut(s) 547
ErhI CCWWGG 4 cut(s) 584, 645, 829, 927
Esp3I CGTCTC 1 cut(s) 828
FalI AAGNNNNNCTT 2 cut(s) 1103, 1135
FaqI GGGAC 3 cut(s) 153, 635, 740
FauI CCCGC 1 cut(s) 766
FbaI TGATCA 1 cut(s) 741
Fnu4HI GCNGC 5 cut(s) 720, 966, 1000, 1197, 1216
FokI GGATG 5 cut(s) 12, 44, 322, 656, 970
Fsp4HI GCNGC 5 cut(s) 720, 966, 1000, 1197, 1216
GlaI GCGC 2 cut(s) 547, 946
GluI GCNGC 5 cut(s) 720, 966, 1000, 1197, 1216
HaeII RGCGCY 1 cut(s) 549
HaeIII GGCC 7 cut(s) 351, 471, 595, 644, 852, 1132, 1215
HapII CCGG 6 cut(s) 459, 840, 853, 937, 987, 1133
HgaI GACGC 2 cut(s) 365, 845
HhaI GCGC 2 cut(s) 548, 947
Hin1I GRCGYC 2 cut(s) 546, 837
Hin6I GCGC 2 cut(s) 546, 945
HinP1I GCGC 2 cut(s) 546, 945
HincII GTYRAC 2 cut(s) 382, 934
HindII GTYRAC 2 cut(s) 382, 934
HindIII AAGCTT 1 cut(s) 551
HinfI GANTC 3 cut(s) 125, 655, 810
HpaII CCGG 6 cut(s) 459, 840, 853, 937, 987, 1133
HphI GGTGA 3 cut(s) 109, 275, 511
Hpy166II GTNNAC 4 cut(s) 333, 382, 664, 934
Hpy188I TCNGA 5 cut(s) 99, 124, 172, 308, 566
Hpy188III TCNNGA 6 cut(s) 182, 652, 912, 1037, 1226, 1249
Hpy8I GTNNAC 4 cut(s) 333, 382, 664, 934
HpyAV CCTTC 4 cut(s) 71, 118, 724, 810
HpyCH4III ACNGT 3 cut(s) 580, 619, 1246
HpyCH4V TGCA 5 cut(s) 221, 318, 369, 410, 664
HpyF10VI GCNNNNNNNGC 1 cut(s) 468
HpyF3I CTNAG 4 cut(s) 169, 259, 504, 1178
Hsp92I GRCGYC 2 cut(s) 546, 837
HspAI GCGC 2 cut(s) 546, 945
KasI GGCGCC 1 cut(s) 545
KpnI GGTACC 1 cut(s) 1186
KroI GCCGGC 1 cut(s) 458
KroNI GCCGGC 1 cut(s) 460
Ksp22I TGATCA 1 cut(s) 741
Kzo9I GATC 6 cut(s) 267, 463, 741, 919, 1222, 1251
LmnI GCTCC 1 cut(s) 455
Lsp1109I GCAGC 3 cut(s) 706, 977, 1183
LweI GCATC 4 cut(s) 34, 163, 175, 992
MaeIII GTNAC 3 cut(s) 482, 613, 700
MalI GATC 6 cut(s) 269, 465, 743, 921, 1224, 1253
MboI GATC 6 cut(s) 267, 463, 741, 919, 1222, 1251
MboII GAAGA 2 cut(s) 106, 868
MflI RGATCY 2 cut(s) 919, 1251
MhlI GDGCHC 2 cut(s) 666, 892
MluCI AATT 4 cut(s) 405, 450, 764, 780
Mly113I GGCGCC 1 cut(s) 546
MmeI TCCRAC 1 cut(s) 947
MroNI GCCGGC 1 cut(s) 458
MslI CAYNNNNRTG 2 cut(s) 251, 897
MspA1I CMGCKG 3 cut(s) 341, 1002, 1196
MspI CCGG 6 cut(s) 459, 840, 853, 937, 987, 1133
MspR9I CCNGG 2 cut(s) 988, 1134
MvnI CGCG 2 cut(s) 947, 1218
MwoI GCNNNNNNNGC 1 cut(s) 468
NaeI GCCGGC 1 cut(s) 460
NarI GGCGCC 1 cut(s) 546
NciI CCSGG 2 cut(s) 988, 1134
NcoI CCATGG 3 cut(s) 584, 645, 829
NdeII GATC 6 cut(s) 267, 463, 741, 919, 1222, 1251
NgoMIV GCCGGC 1 cut(s) 458
NlaIV GGNNCC 6 cut(s) 457, 547, 643, 651, 826, 1184
NmuCI GTSAC 2 cut(s) 613, 700
NspI RCATGY 4 cut(s) 225, 234, 478, 740
PaeI GCATGC 1 cut(s) 225
PceI AGGCCT 1 cut(s) 351
PciI ACATGT 3 cut(s) 230, 474, 736
PdiI GCCGGC 1 cut(s) 460
PfeI GAWTC 3 cut(s) 125, 655, 810
PflFI GACNNNGTC 1 cut(s) 164
PkrI GCNGC 5 cut(s) 721, 967, 1001, 1198, 1217
PluTI GGCGCC 1 cut(s) 549
PpuMI RGGWCCY 1 cut(s) 824
PscI ACATGT 3 cut(s) 230, 474, 736
PshAI GACNNNNGTC 1 cut(s) 840
Psp5II RGGWCCY 1 cut(s) 824
PspN4I GGNNCC 6 cut(s) 457, 547, 643, 651, 826, 1184
PspPI GGNCC 4 cut(s) 594, 642, 649, 824
PspPPI RGGWCCY 1 cut(s) 824
PsuI RGATCY 2 cut(s) 919, 1251
PsyI GACNNNGTC 1 cut(s) 164
RsaI GTAC 4 cut(s) 235, 626, 950, 1184
RsaNI GTAC 4 cut(s) 234, 625, 949, 1183
RseI CAYNNNNRTG 2 cut(s) 251, 897
SatI GCNGC 5 cut(s) 720, 966, 1000, 1197, 1216
Sau3AI GATC 6 cut(s) 267, 463, 741, 919, 1222, 1251
Sau96I GGNCC 4 cut(s) 594, 642, 649, 824
ScrFI CCNGG 2 cut(s) 988, 1134
SduI GDGCHC 2 cut(s) 666, 892
SfaNI GCATC 4 cut(s) 34, 163, 175, 992
SfoI GGCGCC 1 cut(s) 547
SinI GGWCC 2 cut(s) 649, 824
SmiMI CAYNNNNRTG 2 cut(s) 251, 897
SmlI CTYRAG 1 cut(s) 1256
SmoI CTYRAG 1 cut(s) 1256
SphI GCATGC 1 cut(s) 225
Sse9I AATT 4 cut(s) 405, 450, 764, 780
SseBI AGGCCT 1 cut(s) 351
SsiI CCGC 6 cut(s) 23, 339, 759, 1000, 1194, 1216
SspDI GGCGCC 1 cut(s) 545
StuI AGGCCT 1 cut(s) 351
StyD4I CCNGG 2 cut(s) 986, 1132
StyI CCWWGG 4 cut(s) 584, 645, 829, 927
TaaI ACNGT 3 cut(s) 580, 619, 1246
TaqI TCGA 3 cut(s) 183, 808, 1149
TasI AATT 4 cut(s) 405, 450, 764, 780
TatI WGTACW 1 cut(s) 624
TauI GCSGC 2 cut(s) 1002, 1218
TfiI GAWTC 3 cut(s) 125, 655, 810
TscAI CASTG 1 cut(s) 853
TseFI GTSAC 2 cut(s) 613, 700
TseI GCWGC 3 cut(s) 719, 965, 1196
Tsp45I GTSAC 2 cut(s) 613, 700
TspDTI ATGAA 6 cut(s) 17, 27, 410, 499, 510, 757
TspGWI ACGGA 2 cut(s) 118, 572
TspRI CASTG 1 cut(s) 853
Tth111I GACNNNGTC 1 cut(s) 164
VneI GTGCAC 1 cut(s) 662
VpaK11BI GGWCC 2 cut(s) 649, 824
XceI RCATGY 4 cut(s) 225, 234, 478, 740
XcmI CCANNNNNNNNNTGG 2 cut(s) 250, 1233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.