Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010067

Physical Location & Seq

Genomic Coordinates Reverse (-)

15722480 .. 15725062

Gene Structure 2583 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G37450.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 894 bp

ATGGCATGTATGAAGAAGGCACTACCATTCATTTTAATGGTATTGTTGCAAATAGGGTATGCAGGAATGGATATTCTTACAAAGGATGTCCTAAACAAAGGCATGAGCATTTACGTTCTTTCCGTCTACCGTCACGGAGTTGCCACCGTTGTTATGGCTCCGTTCGCCTTCTACTTCGACAAGCTCGAAAGCGTGAAGTTTCAAAGTATCAGGAGTGCCGCTAAGGTGGTTGGAACAGTAACTACAGTTGGAGGAATCATGGTCATGACACTTGTAAAAGGTCCAGCTCTTGACCTCTTCTGGACTAAAGGACCCTCTGCACAGAACACAGTTGGGACCGATATTCATAGCTCCATCAAAGGTGCAGTTTTAGTCACAATTGGTTGCTTCAGCTATGCATGTTTCATGATACTACAAGCAATCACATTGAAGACTTACCCTGCAGAGCTCTCTCTCGCAACATGGATATGCCTAATAGGTACAATAGAGGGAGTAGTTGTAGCATTAGTGATGGAGAAAGGAAATCCTAGCGTGTGGGCCATTGGTTGGGACACTAAACTTCTTACAATCACCTATAGTGGGATAGTGTGCTCAGCGCTTGGTTACTACATTGGAGGAGTGGTGATGAAAACCAGAGGTCCTGTGTTTGTAACAGCTTTCAAACCTCTTTGTATGATCGTTGTGGCGATTATGTCGAGCATCATCTTTGATGAGCAGATGTACCTCGGAAGGGCTCTTGGTGCTACGGTCATATGTGTAGGTCTATACCTTGTGATATGGGGCAAAGCCAAAGATTATGAATATCCTAGCACGCCGCAAATAGATGATGACTTAGCACAAGCAACCACAAGCAAGCAAAAAGAACAAAGAAGAACAGTGATAGAATCAGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0007154 GO:0007165 GO:0008150 GO:0008509 GO:0008514 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0032973 GO:0034220 GO:0042221 GO:0042592 GO:0043090 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055081 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071702 GO:0071705 GO:0071944 GO:0080144 GO:0098656 GO:0099568 GO:0140115 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

297

Amino Acids

32.23

Weight (kDa)

8.85

Isoelectric Point (pI)

37.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EamA	PF00892	87 - 226	1.3e-08	EamA-like transporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010067)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37450 AT2G37450 AT2G37450 AT2G37460
fragaria_vesca	FvH4_6g14370 FvH4_6g14370 FvH4_6g14370 FvH4_6g14370 FvH4_6g14370
malus_domestica	MD04G1120400.v1.1
prunus_persica	Prupe.6G249600_v2.0.a1
pyrus_communis	pycom04g10950
rosa_chinensis	RchiOBHm_Chr3g0467431
rosa_laevigata	RLG00000024505
rosa_multiflora	Rmu_sc0001601.1_g000006
rosa_roxburghii	Rroxscaffold_6G00413680
rosa_rugosa	Rorug03G0086900
rosa_samantha	Rh3BG157000 Rh3CG156900 Rh3DG157800
rosa_wichuraiana	Rw3G012850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	546
AccI	GTMKAC	1 cut(s)	126
AciI	CCGC	2 cut(s)	219, 815
AcuI	CTGAAG	1 cut(s)	373
AfaI	GTAC	2 cut(s)	481, 722
AfeI	AGCGCT	1 cut(s)	597
AfiI	CCNNNNNNNGG	3 cut(s)	546, 579, 730
AgsI	TTSAA	3 cut(s)	203, 430, 661
AluBI	AGCT	6 cut(s)	184, 287, 351, 393, 448, 656
AluI	AGCT	6 cut(s)	184, 287, 351, 393, 448, 656
Alw21I	GWGCWC	2 cut(s)	450, 593
Aor51HI	AGCGCT	1 cut(s)	597
AoxI	GGCC	1 cut(s)	537
AspLEI	GCGC	1 cut(s)	598
AspS9I	GGNCC	5 cut(s)	281, 311, 336, 537, 638
AsuHPI	GGTGA	2 cut(s)	562, 634
AvaII	GGWCC	4 cut(s)	281, 311, 336, 638
BanII	GRGCYC	2 cut(s)	450, 736
BbsI	GAAGAC	1 cut(s)	437
Bbv12I	GWGCWC	2 cut(s)	450, 593
BccI	CCATC	2 cut(s)	362, 505
BfaI	CTAG	2 cut(s)	528, 807
BfmI	CTRYAG	3 cut(s)	243, 441, 574
BfoI	RGCGCY	1 cut(s)	599
BisI	GCNGC	2 cut(s)	219, 815
BlpI	GCTNAGC	1 cut(s)	592
BlsI	GCNGC	2 cut(s)	220, 816
Bme18I	GGWCC	4 cut(s)	281, 311, 336, 638
BmgT120I	GGNCC	5 cut(s)	281, 311, 336, 537, 638
BmiI	GGNNCC	3 cut(s)	159, 313, 337
BmsI	GCATC	1 cut(s)	708
BpiI	GAAGAC	1 cut(s)	437
Bpu10I	CCTNAGC	1 cut(s)	222
Bpu1102I	GCTNAGC	1 cut(s)	592
BsaJI	CCNNGG	1 cut(s)	724
BsaXI	ACNNNNNCTCC	4 cut(s)	483, 513, 606, 636
Bsc4I	CCNNNNNNNGG	3 cut(s)	546, 579, 730
BseDI	CCNNGG	1 cut(s)	724
BseGI	GGATG	1 cut(s)	91
BseLI	CCNNNNNNNGG	3 cut(s)	546, 579, 730
BseMII	CTCAG	1 cut(s)	606
BseRI	GAGGAG	1 cut(s)	630
BsgI	GTGCAG	2 cut(s)	303, 384
BshFI	GGCC	1 cut(s)	539
BsiHKAI	GWGCWC	2 cut(s)	450, 593
BslFI	GGGAC	2 cut(s)	349, 563
BslI	CCNNNNNNNGG	3 cut(s)	546, 579, 730
BsmFI	GGGAC	2 cut(s)	349, 563
BsnI	GGCC	1 cut(s)	539
Bsp1286I	GDGCHC	3 cut(s)	450, 593, 736
Bsp143I	GATC	1 cut(s)	675
Bsp1720I	GCTNAGC	1 cut(s)	592
BspACI	CCGC	2 cut(s)	219, 815
BspANI	GGCC	1 cut(s)	539
BspCNI	CTCAG	1 cut(s)	605
BspHI	TCATGA	2 cut(s)	264, 405
BspLI	GGNNCC	3 cut(s)	159, 313, 337
BspMAI	CTGCAG	1 cut(s)	445
BssECI	CCNNGG	1 cut(s)	724
BssMI	GATC	1 cut(s)	675
Bst4CI	ACNGT	7 cut(s)	131, 148, 238, 247, 331, 748, 877
Bst6I	CTCTTC	1 cut(s)	302
BstC8I	GCNNGC	2 cut(s)	812, 854
BstDEI	CTNAG	3 cut(s)	222, 592, 832
BstF5I	GGATG	1 cut(s)	91
BstH2I	RGCGCY	1 cut(s)	599
BstHHI	GCGC	1 cut(s)	598
BstKTI	GATC	1 cut(s)	678
BstMBI	GATC	1 cut(s)	675
BstMWI	GCNNNNNNNGC	2 cut(s)	164, 740
BstNSI	RCATGY	2 cut(s)	9, 402
BstSFI	CTRYAG	3 cut(s)	243, 441, 574
BstV2I	GAAGAC	1 cut(s)	437
BsuRI	GGCC	1 cut(s)	539
BtsCI	GGATG	1 cut(s)	91
BtsIMutI	CAGTG	1 cut(s)	882
Cac8I	GCNNGC	2 cut(s)	812, 854
CciI	TCATGA	2 cut(s)	264, 405
CfoI	GCGC	1 cut(s)	598
Cfr13I	GGNCC	5 cut(s)	281, 311, 336, 537, 638
Csp6I	GTAC	2 cut(s)	480, 721
CviAII	CATG	7 cut(s)	6, 103, 259, 265, 399, 406, 462
CviQI	GTAC	2 cut(s)	480, 721
DdeI	CTNAG	3 cut(s)	222, 592, 832
DpnI	GATC	1 cut(s)	677
DpnII	GATC	1 cut(s)	675
Eam1104I	CTCTTC	1 cut(s)	302
EarI	CTCTTC	1 cut(s)	302
Ecl136II	GAGCTC	1 cut(s)	448
Eco24I	GRGCYC	2 cut(s)	450, 736
Eco47I	GGWCC	4 cut(s)	281, 311, 336, 638
Eco47III	AGCGCT	1 cut(s)	597
Eco53kI	GAGCTC	1 cut(s)	448
Eco57I	CTGAAG	1 cut(s)	373
EcoICRI	GAGCTC	1 cut(s)	448
EcoO109I	RGGNCCY	2 cut(s)	311, 638
EcoT22I	ATGCAT	1 cut(s)	400
EcoT38I	GRGCYC	2 cut(s)	450, 736
FaeI	CATG	7 cut(s)	9, 106, 262, 268, 402, 409, 465
FaqI	GGGAC	2 cut(s)	349, 563
FatI	CATG	7 cut(s)	5, 102, 258, 264, 398, 405, 461
FauNDI	CATATG	1 cut(s)	752
FblI	GTMKAC	1 cut(s)	126
Fnu4HI	GCNGC	2 cut(s)	219, 815
FokI	GGATG	1 cut(s)	98
FriOI	GRGCYC	2 cut(s)	450, 736
Fsp4HI	GCNGC	2 cut(s)	219, 815
FspBI	CTAG	2 cut(s)	528, 807
GlaI	GCGC	1 cut(s)	597
GluI	GCNGC	2 cut(s)	219, 815
HaeII	RGCGCY	1 cut(s)	599
HaeIII	GGCC	1 cut(s)	539
HhaI	GCGC	1 cut(s)	598
Hin1II	CATG	7 cut(s)	9, 106, 262, 268, 402, 409, 465
Hin6I	GCGC	1 cut(s)	596
HinP1I	GCGC	1 cut(s)	596
HinfI	GANTC	2 cut(s)	255, 884
HphI	GGTGA	2 cut(s)	562, 634
Hpy166II	GTNNAC	1 cut(s)	127
Hpy188I	TCNGA	1 cut(s)	728
Hpy188III	TCNNGA	5 cut(s)	211, 265, 290, 301, 406
Hpy8I	GTNNAC	1 cut(s)	127
HpyAV	CCTTC	3 cut(s)	10, 178, 723
HpyCH4III	ACNGT	7 cut(s)	131, 148, 238, 247, 331, 748, 877
HpyCH4IV	ACGT	1 cut(s)	114
HpyCH4V	TGCA	6 cut(s)	49, 62, 320, 365, 398, 443
HpyF10VI	GCNNNNNNNGC	2 cut(s)	164, 740
HpyF3I	CTNAG	3 cut(s)	222, 592, 832
HpySE526I	ACGT	1 cut(s)	114
Hsp92II	CATG	7 cut(s)	9, 106, 262, 268, 402, 409, 465
HspAI	GCGC	1 cut(s)	596
Kzo9I	GATC	1 cut(s)	675
LmnI	GCTCC	2 cut(s)	163, 356
LpnPI	CCDG	7 cut(s)	48, 196, 286, 297, 453, 646, 654
LweI	GCATC	1 cut(s)	708
MaeI	CTAG	2 cut(s)	528, 807
MaeII	ACGT	1 cut(s)	114
MaeIII	GTNAC	5 cut(s)	131, 238, 373, 602, 649
MalI	GATC	1 cut(s)	677
MboI	GATC	1 cut(s)	675
MboII	GAAGA	4 cut(s)	25, 289, 442, 882
MfeI	CAATTG	1 cut(s)	378
MhlI	GDGCHC	3 cut(s)	450, 593, 736
MluCI	AATT	1 cut(s)	378
MmeI	TCCRAC	2 cut(s)	211, 229
MnlI	CCTC	8 cut(s)	245, 305, 325, 481, 608, 629, 675, 734
Mph1103I	ATGCAT	1 cut(s)	400
MseI	TTAA	1 cut(s)	35
MslI	CAYNNNNRTG	3 cut(s)	35, 263, 466
MunI	CAATTG	1 cut(s)	378
MwoI	GCNNNNNNNGC	2 cut(s)	164, 740
NdeI	CATATG	1 cut(s)	752
NdeII	GATC	1 cut(s)	675
NlaIII	CATG	7 cut(s)	9, 106, 262, 268, 402, 409, 465
NlaIV	GGNNCC	3 cut(s)	159, 313, 337
NmuCI	GTSAC	2 cut(s)	131, 373
NsiI	ATGCAT	1 cut(s)	400
NspI	RCATGY	2 cut(s)	9, 402
PagI	TCATGA	2 cut(s)	264, 405
PcsI	WCGNNNNNNNCGW	2 cut(s)	120, 183
PfeI	GAWTC	2 cut(s)	255, 884
PflMI	CCANNNNNTGG	1 cut(s)	546
PkrI	GCNGC	2 cut(s)	220, 816
PpuMI	RGGWCCY	2 cut(s)	311, 638
Psp124BI	GAGCTC	1 cut(s)	450
Psp5II	RGGWCCY	2 cut(s)	311, 638
PspN4I	GGNNCC	3 cut(s)	159, 313, 337
PspPI	GGNCC	5 cut(s)	281, 311, 336, 537, 638
PspPPI	RGGWCCY	2 cut(s)	311, 638
PsrI	GAACNNNNNNTAC	2 cut(s)	226, 258
PstI	CTGCAG	1 cut(s)	445
RsaI	GTAC	2 cut(s)	481, 722
RsaNI	GTAC	2 cut(s)	480, 721
RseI	CAYNNNNRTG	3 cut(s)	35, 263, 466
SacI	GAGCTC	1 cut(s)	450
SaqAI	TTAA	1 cut(s)	35
SatI	GCNGC	2 cut(s)	219, 815
Sau3AI	GATC	1 cut(s)	675
Sau96I	GGNCC	5 cut(s)	281, 311, 336, 537, 638
SduI	GDGCHC	3 cut(s)	450, 593, 736
SfaNI	GCATC	1 cut(s)	708
SfcI	CTRYAG	3 cut(s)	243, 441, 574
SinI	GGWCC	4 cut(s)	281, 311, 336, 638
SmiMI	CAYNNNNRTG	3 cut(s)	35, 263, 466
Sse9I	AATT	1 cut(s)	378
SsiI	CCGC	2 cut(s)	219, 815
SspMI	CTAG	2 cut(s)	528, 807
SstI	GAGCTC	1 cut(s)	450
TaaI	ACNGT	7 cut(s)	131, 148, 238, 247, 331, 748, 877
TaiI	ACGT	1 cut(s)	117
TaqI	TCGA	3 cut(s)	177, 186, 695
TaqII	GACCGA	1 cut(s)	353
TasI	AATT	1 cut(s)	378
TauI	GCSGC	2 cut(s)	221, 817
TfiI	GAWTC	2 cut(s)	255, 884
Tru1I	TTAA	1 cut(s)	35
Tru9I	TTAA	1 cut(s)	35
TscAI	CASTG	1 cut(s)	882
TseFI	GTSAC	2 cut(s)	131, 373
Tsp45I	GTSAC	2 cut(s)	131, 373
TspDTI	ATGAA	6 cut(s)	19, 26, 335, 394, 641, 813
TspGWI	ACGGA	3 cut(s)	112, 150, 150
TspRI	CASTG	1 cut(s)	882
Van91I	CCANNNNNTGG	1 cut(s)	546
VpaK11BI	GGWCC	4 cut(s)	281, 311, 336, 638
XceI	RCATGY	2 cut(s)	9, 402
XcmI	CCANNNNNNNNNTGG	1 cut(s)	151
XmiI	GTMKAC	1 cut(s)	126
XspI	CTAG	2 cut(s)	528, 807
Zsp2I	ATGCAT	1 cut(s)	400

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.